EWM20974.1, cds9696 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20974.1 vs. NCBI_GenBank
Match: gi|585100960|gb|EWM20974.1| (Protein of unknown function DUF2064 [Nannochloropsis gaditana]) HSP 1 Score: 791.956 bits (2044), Expect = 0.000e+0 Identity = 394/394 (100.00%), Postives = 394/394 (100.00%), Query Frame = 0 Query: 1 MRTRPPAPTPVLLVLTISHAVCAKRNSGWLEPWPRKIVQQDCRGYFPKTTDLVLPASVATSHYSSLWTATALPSLSMVINSISAARPPLLDRGNVPPIPPARDVGWGGDGRPERNDAYHDKIYGQHTPASLAGSATPSLAPRVYLFTKYPVPGQVKTRMIPALGREGAMRLHRRLVHRTLASLDAFRRQGCPGRRKRGQDARGEGAVVDCRVRYDDGLTGQGGMALMQAWLGMDWIYEAQGPGDLGARLAAATAMADGGEEGVGSVVVVGSDCPFLRPRHLRAAIRALSDTQEGGGEEEEEEGGHDLVLGPATDGGYWLVGLRRPCPALFRDVDWGTSRVLNQTLARAESLGLKVKLLEALSDMDRPQDLALWRPPPLTSVVIPVVNEAEEGGR 394 MRTRPPAPTPVLLVLTISHAVCAKRNSGWLEPWPRKIVQQDCRGYFPKTTDLVLPASVATSHYSSLWTATALPSLSMVINSISAARPPLLDRGNVPPIPPARDVGWGGDGRPERNDAYHDKIYGQHTPASLAGSATPSLAPRVYLFTKYPVPGQVKTRMIPALGREGAMRLHRRLVHRTLASLDAFRRQGCPGRRKRGQDARGEGAVVDCRVRYDDGLTGQGGMALMQAWLGMDWIYEAQGPGDLGARLAAATAMADGGEEGVGSVVVVGSDCPFLRPRHLRAAIRALSDTQEGGGEEEEEEGGHDLVLGPATDGGYWLVGLRRPCPALFRDVDWGTSRVLNQTLARAESLGLKVKLLEALSDMDRPQDLALWRPPPLTSVVIPVVNEAEEGGR Sbjct: 1 MRTRPPAPTPVLLVLTISHAVCAKRNSGWLEPWPRKIVQQDCRGYFPKTTDLVLPASVATSHYSSLWTATALPSLSMVINSISAARPPLLDRGNVPPIPPARDVGWGGDGRPERNDAYHDKIYGQHTPASLAGSATPSLAPRVYLFTKYPVPGQVKTRMIPALGREGAMRLHRRLVHRTLASLDAFRRQGCPGRRKRGQDARGEGAVVDCRVRYDDGLTGQGGMALMQAWLGMDWIYEAQGPGDLGARLAAATAMADGGEEGVGSVVVVGSDCPFLRPRHLRAAIRALSDTQEGGGEEEEEEGGHDLVLGPATDGGYWLVGLRRPCPALFRDVDWGTSRVLNQTLARAESLGLKVKLLEALSDMDRPQDLALWRPPPLTSVVIPVVNEAEEGGR 394
BLAST of EWM20974.1 vs. NCBI_GenBank
Match: gi|751567058|ref|WP_041035956.1| (hypothetical protein [Tolypothrix campylonemoides] >gi|750915855|gb|KIJ75749.1| hypothetical protein SD81_14515 [Tolypothrix campylonemoides VB511288]) HSP 1 Score: 176.792 bits (447), Expect = 6.574e-50 Identity = 91/233 (39.06%), Postives = 132/233 (56.65%), Query Frame = 0 Query: 142 RVYLFTKYPVPGQVKTRMIPALGREGAMRLHRRLVHRTLASLDAFRRQGCPGRRKRGQDARGEGAVVDCRVRYDDGLTGQGGMALMQAWLGMDWIYEAQGPGDLGARLAAATAMADGGEEGVGSVVVVGSDCPFLRPRHLRAAIRALSDTQEGGGEEEEEEGGHDLVLGPATDGGYWLVGLRRPCPALFRDVDWGTSRVLNQTLARAESLGLKVKLLEALSDMDRPQDLALWR 374 + +FT+YP PG+ KTR+IPALG EGA L R++ TL+ + ++ + + C VR+ G + LMQ WLG D Y+ QG GDLG+R+A + + + G +V+ +G+DCP + + L A + L DLVLGPA DGGY+L+GL+RP P LF ++DWGTS+VL QT+ A++L L V L L+D+DRP+DL +W Sbjct: 11 HLIIFTRYPEPGKTKTRLIPALGTEGAANLQRQMTEHTLSQVKQLQK----------------TSAISCEVRF-----AGGNLQLMQDWLGYDIAYQPQGEGDLGSRMAQS--FYNAFQSGAETVITIGTDCPDVNDQILAEAFKQLQQ--------------RDLVLGPAVDGGYYLIGLQRPVPELFINIDWGTSQVLQQTIDTAQTLNLLVNYLPLLADIDRPEDLPIWE 206
BLAST of EWM20974.1 vs. NCBI_GenBank
Match: gi|889970808|ref|WP_048868958.1| (hypothetical protein [Scytonema tolypothrichoides] >gi|750923064|gb|KIJ82882.1| hypothetical protein SD80_14490 [Scytonema tolypothrichoides VB-61278]) HSP 1 Score: 174.096 bits (440), Expect = 6.833e-49 Identity = 92/233 (39.48%), Postives = 131/233 (56.22%), Query Frame = 0 Query: 142 RVYLFTKYPVPGQVKTRMIPALGREGAMRLHRRLVHRTLASLDAFRRQGCPGRRKRGQDARGEGAVVDCRVRYDDGLTGQGGMALMQAWLGMDWIYEAQGPGDLGARLAAATAMADGGEEGVGSVVVVGSDCPFLRPRHLRAAIRALSDTQEGGGEEEEEEGGHDLVLGPATDGGYWLVGLRRPCPALFRDVDWGTSRVLNQTLARAESLGLKVKLLEALSDMDRPQDLALWR 374 + +FT+YP PG+ KTR+IPALG EGA L R++ TL+ + ++ +V+ VR+ G + LMQ WLG D +Y+ QG GDLG R+ + + E G VV +G+DCP + + L A L + DLVLGPA DGGY+L+GL+RP P LF ++DWGTS+VL+QT++ A+ L L V L L+D+DRP+DL +W Sbjct: 11 HLIIFTRYPEPGKTKTRLIPALGTEGAANLQRQMTEHTLSQVKQLQK----------------TSVISFEVRF-----AGGNLQLMQEWLGYDLVYQPQGEGDLGLRMTQS--FLNAFESGAEKVVTIGTDCPGVNNQILAEAFAQLQEC--------------DLVLGPAVDGGYYLIGLQRPMPELFINIDWGTSQVLHQTISIAQMLNLSVTNLPHLADIDRPEDLPIWE 206
BLAST of EWM20974.1 vs. NCBI_GenBank
Match: gi|505015446|ref|WP_015202548.1| (hypothetical protein [Crinalium epipsammum] >gi|428246647|gb|AFZ12427.1| Protein of unknown function DUF2064 [Crinalium epipsammum PCC 9333]) HSP 1 Score: 172.555 bits (436), Expect = 2.162e-48 Identity = 103/245 (42.04%), Postives = 137/245 (55.92%), Query Frame = 0 Query: 134 SATPSLAPRVYLFTKYPVPGQVKTRMIPALGREGAMRLHRRLVHRTLASLDAFRRQGCPGRRKRGQDARGEGAVVDCRVRYDDGLTGQGGMALMQAWLGMDWIYEAQGPGDLGARLAAATAMADGGEEGVGSVVVVGSDCPFLRPRHLRAAIRALSDTQEGGGEEEEEEGGHDLVLGPATDGGYWLVGLRRPCPALFRDVDWGTSRVLNQTLARAESLGLKVKLLEALSDMDRPQDLALWRPPPL 378 +AT SL +FT+YP PG+ KTR+IPALG EGA L R++ TL + K Q R ++ V + G T LMQ WLG D Y+ QG GDLG+R+ A A A+ EEG SVV++G+DCP L+P+ + A + LS HDLVLGPA DGGY+L+GLRR P LF ++WGTS VL QT+ + L L + L L+D+DRP+DL++ L Sbjct: 8 AATESLI----IFTRYPEPGKTKTRLIPALGAEGAANLGRKMTEHTLNQV------------KELQSLR----LIAVAVYFAGGNT-----QLMQQWLGSDLRYQCQGEGDLGSRM--ALAFANAFEEGSKSVVIIGTDCPSLKPKLMEDAFKTLSQ--------------HDLVLGPAQDGGYYLIGLRRFIPELFTGINWGTSSVLQQTVTIGKQLDLALAYLPTLADVDRPEDLSVLHQTNL 211
BLAST of EWM20974.1 vs. NCBI_GenBank
Match: gi|1121311299|ref|WP_073622443.1| (hypothetical protein [Calothrix sp. HK-06] >gi|1115279884|gb|OKH43126.1| hypothetical protein NIES2101_31420 [Calothrix sp. HK-06]) HSP 1 Score: 170.244 bits (430), Expect = 2.047e-47 Identity = 94/233 (40.34%), Postives = 127/233 (54.51%), Query Frame = 0 Query: 142 RVYLFTKYPVPGQVKTRMIPALGREGAMRLHRRLVHRTLASLDAFRRQGCPGRRKRGQDARGEGAVVDCRVRYDDGLTGQGGMALMQAWLGMDWIYEAQGPGDLGARLAAATAMADGGEEGVGSVVVVGSDCPFLRPRHLRAAIRALSDTQEGGGEEEEEEGGHDLVLGPATDGGYWLVGLRRPCPALFRDVDWGTSRVLNQTLARAESLGLKVKLLEALSDMDRPQDLALWR 374 + LFT+YP P + KTR+IP LG +GA LHR + TL+ + V VR+ G + LMQAWLG +Y+ QG GDLG R+ A A D +EG +++GSDCP + + L A L+D DLVLGPA DGGY+L+GLRRP P LF++++WGTS VL QT+ A +LGL + L L+D+DRP+DL +W Sbjct: 3 HLILFTRYPEPNRTKTRLIPKLGADGAANLHREMTEHTLSQVLPLN--------------------VSMEVRF-----AGGSLGLMQAWLGSGLVYQPQGEGDLGERM--ARAFHDSFKEGACKTIIIGSDCPGIDAQILTTAFAHLNDV--------------DLVLGPALDGGYYLIGLRRPIPDLFKNINWGTSEVLQQTINVAHTLGLSFQCLAPLADVDRPEDLEVWH 194
BLAST of EWM20974.1 vs. NCBI_GenBank
Match: gi|515888549|ref|WP_017319132.1| (hypothetical protein [Mastigocladopsis repens]) HSP 1 Score: 170.244 bits (430), Expect = 2.197e-47 Identity = 88/233 (37.77%), Postives = 130/233 (55.79%), Query Frame = 0 Query: 142 RVYLFTKYPVPGQVKTRMIPALGREGAMRLHRRLVHRTLASLDAFRRQGCPGRRKRGQDARGEGAVVDCRVRYDDGLTGQGGMALMQAWLGMDWIYEAQGPGDLGARLAAATAMADGGEEGVGSVVVVGSDCPFLRPRHLRAAIRALSDTQEGGGEEEEEEGGHDLVLGPATDGGYWLVGLRRPCPALFRDVDWGTSRVLNQTLARAESLGLKVKLLEALSDMDRPQDLALWR 374 + +FT+YP PG+ KTR+IPALG EGA L R++ TL + + + + VR+ G + LMQ WLG + +Y QG GDLG+R+A + + + G V+++G+DCP + L A L + +LVLGPA DGGY+L+GL+RP P LF ++DWGTS+VL QT+ A++L L V L +L+D+DRP+DL +W+ Sbjct: 11 HLIIFTRYPKPGETKTRLIPALGTEGAANLQRQMTEHTLFQVKQLQ----------------SSSAISFEVRF-----AGGNLQLMQDWLGYELVYRPQGEGDLGSRMAQS--FFNAFQAGAEKVIIIGTDCPGVNVEILGKAFEQLQHS--------------NLVLGPAVDGGYYLIGLQRPVPELFINIDWGTSQVLQQTIDIAQTLNLSVAYLASLADIDRPEDLPIWK 206
BLAST of EWM20974.1 vs. NCBI_GenBank
Match: gi|1210206711|dbj|BAZ25752.1| (hypothetical protein NIES4073_66580 [Scytonema sp. NIES-4073]) HSP 1 Score: 169.474 bits (428), Expect = 3.569e-47 Identity = 90/233 (38.63%), Postives = 130/233 (55.79%), Query Frame = 0 Query: 142 RVYLFTKYPVPGQVKTRMIPALGREGAMRLHRRLVHRTLASLDAFRRQGCPGRRKRGQDARGEGAVVDCRVRYDDGLTGQGGMALMQAWLGMDWIYEAQGPGDLGARLAAATAMADGGEEGVGSVVVVGSDCPFLRPRHLRAAIRALSDTQEGGGEEEEEEGGHDLVLGPATDGGYWLVGLRRPCPALFRDVDWGTSRVLNQTLARAESLGLKVKLLEALSDMDRPQDLALWR 374 + +FT+YP PG+ KTR+IPALG EGA L R++ TL+ + ++ + + VR+ G + LMQ WLG D Y+ QG GDLG+R+A + + + G V+ +G+DCP + + L A + L DLVLGPA DGGY+L+GL+RP P LF ++DWGTS+VL QT+ A++L L V L L+D+DRP+DL +W Sbjct: 14 HLIIFTRYPEPGKTKTRLIPALGTEGAANLQRQMTEHTLSQVKQLQK----------------TSAISFEVRF-----AGGHLQLMQDWLGYDIAYQPQGEGDLGSRMAQS--FYNAFQSGAEKVLTIGTDCPDVNDQILAEAFKQLQQC--------------DLVLGPAVDGGYYLIGLQRPVPELFINIDWGTSQVLQQTIDTAQTLNLLVDYLPLLADIDRPEDLPIWE 209
BLAST of EWM20974.1 vs. NCBI_GenBank
Match: gi|1062966542|ref|WP_069350009.1| (hypothetical protein [Scytonema millei] >gi|1061901845|gb|ODN57678.1| hypothetical protein QH73_010355 [Scytonema millei VB511283]) HSP 1 Score: 167.933 bits (424), Expect = 1.722e-46 Identity = 90/233 (38.63%), Postives = 125/233 (53.65%), Query Frame = 0 Query: 142 RVYLFTKYPVPGQVKTRMIPALGREGAMRLHRRLVHRTLASLDAFRRQGCPGRRKRGQDARGEGAVVDCRVRYDDGLTGQGGMALMQAWLGMDWIYEAQGPGDLGARLAAATAMADGGEEGVGSVVVVGSDCPFLRPRHLRAAIRALSDTQEGGGEEEEEEGGHDLVLGPATDGGYWLVGLRRPCPALFRDVDWGTSRVLNQTLARAESLGLKVKLLEALSDMDRPQDLALWR 374 + +FT+YP PG+ KTR+IPALG EGA L R++ TL+ + ++ + + VRY G + LMQ WLG D +Y QG GDLG+R+ + + E G V+ +G+DCP + L A L DLVLGPA DGGY+L+GL+RP P LF +DWGTS+V QT+ A++L L V L L+D+DRP+DL +W Sbjct: 11 HLIIFTRYPEPGKTKTRLIPALGTEGAANLQRQMTEYTLSQVKQLQK----------------TSAISFEVRY-----AGGDLQLMQDWLGYDLVYRPQGEGDLGSRMTQS--FLNAFESGAEKVITIGTDCPDANAQILTQAFEKLQQC--------------DLVLGPAVDGGYYLIGLQRPVPELFISIDWGTSQVFQQTINIAQTLNLLVADLPFLADIDRPEDLPIWE 206
BLAST of EWM20974.1 vs. NCBI_GenBank
Match: gi|504930581|ref|WP_015117683.1| (hypothetical protein [Rivularia sp. PCC 7116] >gi|427370151|gb|AFY54107.1| hypothetical protein Riv7116_1547 [Rivularia sp. PCC 7116]) HSP 1 Score: 167.933 bits (424), Expect = 1.884e-46 Identity = 87/240 (36.25%), Postives = 133/240 (55.42%), Query Frame = 0 Query: 136 TPSLAPR-VYLFTKYPVPGQVKTRMIPALGREGAMRLHRRLVHRTLASLDAFRRQGCPGRRKRGQDARGEGAVVDCRVRYDDGLTGQGGMALMQAWLGMDWIYEAQGPGDLGARLAAATAMADGGEEGVGSVVVVGSDCPFLRPRHLRAAIRALSDTQEGGGEEEEEEGGHDLVLGPATDGGYWLVGLRRPCPALFRDVDWGTSRVLNQTLARAESLGLKVKLLEALSDMDRPQDLALWR 374 +P +A + + +FT+YP PG+ KTR+IPALG EGA L R++ TL+ + F+ E A + +R+ DG + LMQ WLG + Y+ QG GDLG R+ + + +G V ++G DCP + + L A + + ++ DL+LGPA DGGY+L+ L+R LF ++DWGT++VL QT+ A+ L L V L L+D+DRP+DL +W+ Sbjct: 4 SPKIAKQHLIIFTRYPQPGKTKTRLIPALGAEGAANLQRQMTEYTLSKVKKFQ----------------ESAAISFEIRFADG-----NLQLMQNWLGTELNYQLQGEGDLGKRME--NSFMNAFNQGAQEVAIIGIDCPGVNNQVLTEAFQKIQNS--------------DLLLGPAVDGGYYLIALKRAIGQLFTNIDWGTAKVLQQTVDIAQQLNLSVAYLPTLADVDRPEDLPIWQ 206
BLAST of EWM20974.1 vs. NCBI_GenBank
Match: gi|1121323409|ref|WP_073633520.1| (hypothetical protein [Scytonema sp. HK-05] >gi|1115293915|gb|OKH56937.1| hypothetical protein NIES2130_22445 [Scytonema sp. HK-05] >gi|1210126560|dbj|BAY45674.1| hypothetical protein SAMD00079811_32810 [Scytonema sp. HK-05]) HSP 1 Score: 166.777 bits (421), Expect = 4.216e-46 Identity = 89/233 (38.20%), Postives = 128/233 (54.94%), Query Frame = 0 Query: 142 RVYLFTKYPVPGQVKTRMIPALGREGAMRLHRRLVHRTLASLDAFRRQGCPGRRKRGQDARGEGAVVDCRVRYDDGLTGQGGMALMQAWLGMDWIYEAQGPGDLGARLAAATAMADGGEEGVGSVVVVGSDCPFLRPRHLRAAIRALSDTQEGGGEEEEEEGGHDLVLGPATDGGYWLVGLRRPCPALFRDVDWGTSRVLNQTLARAESLGLKVKLLEALSDMDRPQDLALWR 374 + +FT+YP PG+ KTR+IPALG EGA L R++ TL+ + ++ + + VR+ G + LMQ WLG D Y+ QG GDLG+R+A + + + G V+ +G+DCP + + L A L DLVLGPA DGGY+L+GL+R P LF ++DWGTS+VL QT+ A++L L V L L+D+DRP+DL +W Sbjct: 11 HLIIFTRYPEPGKTKTRLIPALGTEGAANLQRQMTEHTLSQVKQLQK----------------TSAISFEVRF-----AGGHLQLMQDWLGYDIAYQPQGEGDLGSRMAQS--FYNAFQSGAEKVLTIGTDCPDVNDQILAEAFEQLQQC--------------DLVLGPAVDGGYYLIGLQRSVPELFINIDWGTSQVLQQTIDTAQTLNLLVNYLPLLADIDRPEDLPIWE 206 The following BLAST results are available for this feature:
BLAST of EWM20974.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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