EWM20982.1, cds9691 (CDS) Nannochloropsis gaditana

Overview
NameEWM20982.1
Unique Namecds9691
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037255.1:251541..251714 -
Alignment locationKK037255.1:251141..251355 -
Alignment locationKK037255.1:250814..250966 -
Alignment locationKK037255.1:250437..250605 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20982.1
Productperoxisomal targeting signal 1 receptor
Partialtrue
Orig transcript idgnl|cribi|Naga_100487g5.5513.mrna
GbkeyCDS
End range.
End range251714
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037255.1supercontigKK037255.1:251541..251714 -
KK037255.1supercontigKK037255.1:251141..251355 -
KK037255.1supercontigKK037255.1:250814..250966 -
KK037255.1supercontigKK037255.1:250437..250605 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR013026TPR-contain_dom
IPR024111PTS1R_family
IPR001440TPR_1
IPR011990TPR-like_helical_dom
IPR019734TPR_repeat
Homology
[Close]
BLAST of EWM20982.1 vs. NCBI_GenBank
Match: gi|585100977|gb|EWM20982.1| (peroxisomal targeting signal 1 receptor, partial [Nannochloropsis gaditana])

HSP 1 Score: 484.182 bits (1245), Expect = 4.244e-173
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0 
Query:    1 AENDEDKRAIACLERAVDQDPHSLPALLALGVSYVNELDSVRALQNLKAWVEHNPKYQGLEIRVDEYSDGSLMDEVTQLMLQAQDWDRATCGPEGQDADVEVVLGVLYNVSHDYDSAAAAFRQALVARPSDYSLWNKLGATLANSQRSDEALPAYHRALDLKPKYARGWLNLGISHANLGRYEEAARCYLRALRLNPEAGHMWGYLRVTFTSMERFDLVQLAGQQDPSLFEAEFGR 236
            AENDEDKRAIACLERAVDQDPHSLPALLALGVSYVNELDSVRALQNLKAWVEHNPKYQGLEIRVDEYSDGSLMDEVTQLMLQAQDWDRATCGPEGQDADVEVVLGVLYNVSHDYDSAAAAFRQALVARPSDYSLWNKLGATLANSQRSDEALPAYHRALDLKPKYARGWLNLGISHANLGRYEEAARCYLRALRLNPEAGHMWGYLRVTFTSMERFDLVQLAGQQDPSLFEAEFGR
Sbjct:    1 AENDEDKRAIACLERAVDQDPHSLPALLALGVSYVNELDSVRALQNLKAWVEHNPKYQGLEIRVDEYSDGSLMDEVTQLMLQAQDWDRATCGPEGQDADVEVVLGVLYNVSHDYDSAAAAFRQALVARPSDYSLWNKLGATLANSQRSDEALPAYHRALDLKPKYARGWLNLGISHANLGRYEEAARCYLRALRLNPEAGHMWGYLRVTFTSMERFDLVQLAGQQDPSLFEAEFGR 236
[Close]
BLAST of EWM20982.1 vs. NCBI_GenBank
Match: gi|298708252|emb|CBJ48315.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 342.428 bits (877), Expect = 2.143e-110
Identity = 169/234 (72.22%), Postives = 194/234 (82.91%), Query Frame = 0 
Query:    1 AENDEDKRAIACLERAVDQDPHSLPALLALGVSYVNELDSVRALQNLKAWVEHNPKYQGLEIRVDEYSDGSLMDEVTQLMLQAQDWDRATCGPEGQDADVEVVLGVLYNVSHDYDSAAAAFRQALVARPSDYSLWNKLGATLANSQRSDEALPAYHRALDLKPKYARGWLNLGISHANLGRYEEAARCYLRALRLNPEAGHMWGYLRVTFTSMERFDLVQLAGQQDPSLFEAEF 234
            AEND+D+ AI+CLE+AV+ DP+SL ALLALG SYVNELDS +AL NLKAWVEHNPKY GLEI VDEYSDG+LMDEV QLMLQAQ WD         DAD  VVLGVLYNVS DYDSAA AFR+A+ ARP+D+SLWNKLGATLANS++S+ ALPAY RA+  KP YAR WLN+GIS ANL RYEEA+ CYL+ALRLNPEA H+W YLR+ F+SMERFDLVQ AG++D  LFE +F
Sbjct:  504 AENDQDRLAISCLEKAVEIDPYSLDALLALGTSYVNELDSQKALTNLKAWVEHNPKYSGLEIAVDEYSDGTLMDEVMQLMLQAQRWD-------ATDADAHVVLGVLYNVSRDYDSAAEAFRRAIEARPNDHSLWNKLGATLANSRQSEAALPAYRRAIASKPGYARAWLNMGISQANLNRYEEASSCYLQALRLNPEAKHIWSYLRIVFSSMERFDLVQKAGKEDAGLFEDDF 730
[Close]
BLAST of EWM20982.1 vs. NCBI_GenBank
Match: gi|675174051|ref|XP_008895910.1| (hypothetical protein PPTG_03877 [Phytophthora parasitica INRA-310] >gi|568039065|gb|ETM36577.1| hypothetical protein L914_16778 [Phytophthora parasitica] >gi|568103552|gb|ETN18209.1| hypothetical protein PPTG_03877 [Phytophthora parasitica INRA-310] >gi|570317239|gb|ETO65187.1| hypothetical protein F444_17480 [Phytophthora parasitica P1976] >gi|570971249|gb|ETP34368.1| hypothetical protein F442_17293 [Phytophthora parasitica P10297] >gi|970630099|gb|KUF77149.1| Peroxisome biogenesis protein 5 [Phytophthora nicotianae] >gi|970653699|gb|KUF92132.1| Peroxisome biogenesis protein 5 [Phytophthora nicotianae] >gi|970656497|gb|KUF94500.1| hypothetical protein AM588_10006639 [Phytophthora nicotianae])

HSP 1 Score: 330.487 bits (846), Expect = 1.727e-106
Identity = 160/234 (68.38%), Postives = 191/234 (81.62%), Query Frame = 0 
Query:    1 AENDEDKRAIACLERAVDQDPHSLPALLALGVSYVNELDSVRALQNLKAWVEHNPKYQGLEIRVDEYSDGSLMDEVTQLMLQAQDWDRATCGPEGQDADVEVVLGVLYNVSHDYDSAAAAFRQALVARPSDYSLWNKLGATLANSQRSDEALPAYHRALDLKPKYARGWLNLGISHANLGRYEEAARCYLRALRLNPEAGHMWGYLRVTFTSMERFDLVQLAGQQDPSLFEAEF 234
            AENDEDK AI CLERAV++DP++L ALLALGVS VNEL+   AL+ LKAWV+HNPK+ GLEI+VDEYSDGSLMDEV QLMLQA+  D +       D+DV+VVLGVLYNVS DYD+A A+F+ A  +RP +Y+LWNK+GATLANS RS EA+PAYHRAL+LKP+YARGWLNLGISHANLG YEEA +CYL+AL LN  A H+W YLR+ FT MERFDLV++A  +D + F  EF
Sbjct:  441 AENDEDKSAIICLERAVEEDPYNLSALLALGVSNVNELNPQGALKTLKAWVQHNPKFHGLEIQVDEYSDGSLMDEVMQLMLQARAHDPS-------DSDVQVVLGVLYNVSKDYDAAVASFKAATDSRPDEYALWNKIGATLANSARSSEAIPAYHRALELKPRYARGWLNLGISHANLGNYEEATKCYLQALSLNNRADHIWSYLRICFTCMERFDLVKIADTKDIARFREEF 667
[Close]
BLAST of EWM20982.1 vs. NCBI_GenBank
Match: gi|567950990|gb|ETK76697.1| (hypothetical protein L915_16963 [Phytophthora parasitica] >gi|567979654|gb|ETL30130.1| hypothetical protein L916_16863 [Phytophthora parasitica] >gi|570941032|gb|ETP06289.1| hypothetical protein F441_17310 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 330.487 bits (846), Expect = 1.745e-106
Identity = 160/234 (68.38%), Postives = 191/234 (81.62%), Query Frame = 0 
Query:    1 AENDEDKRAIACLERAVDQDPHSLPALLALGVSYVNELDSVRALQNLKAWVEHNPKYQGLEIRVDEYSDGSLMDEVTQLMLQAQDWDRATCGPEGQDADVEVVLGVLYNVSHDYDSAAAAFRQALVARPSDYSLWNKLGATLANSQRSDEALPAYHRALDLKPKYARGWLNLGISHANLGRYEEAARCYLRALRLNPEAGHMWGYLRVTFTSMERFDLVQLAGQQDPSLFEAEF 234
            AENDEDK AI CLERAV++DP++L ALLALGVS VNEL+   AL+ LKAWV+HNPK+ GLEI+VDEYSDGSLMDEV QLMLQA+  D +       D+DV+VVLGVLYNVS DYD+A A+F+ A  +RP +Y+LWNK+GATLANS RS EA+PAYHRAL+LKP+YARGWLNLGISHANLG YEEA +CYL+AL LN  A H+W YLR+ FT MERFDLV++A  +D + F  EF
Sbjct:  441 AENDEDKSAIICLERAVEEDPYNLSALLALGVSNVNELNPQGALKTLKAWVQHNPKFHGLEIQVDEYSDGSLMDEVMQLMLQARAHDPS-------DSDVQVVLGVLYNVSKDYDAAVASFKAATDSRPDEYALWNKIGATLANSARSSEAIPAYHRALELKPRYARGWLNLGISHANLGNYEEATKCYLQALSLNNRADHIWSYLRICFTCMERFDLVKIADTKDIARFREEF 667
[Close]
BLAST of EWM20982.1 vs. NCBI_GenBank
Match: gi|568009141|gb|ETL83352.1| (hypothetical protein L917_16701 [Phytophthora parasitica])

HSP 1 Score: 330.487 bits (846), Expect = 1.842e-106
Identity = 160/234 (68.38%), Postives = 191/234 (81.62%), Query Frame = 0 
Query:    1 AENDEDKRAIACLERAVDQDPHSLPALLALGVSYVNELDSVRALQNLKAWVEHNPKYQGLEIRVDEYSDGSLMDEVTQLMLQAQDWDRATCGPEGQDADVEVVLGVLYNVSHDYDSAAAAFRQALVARPSDYSLWNKLGATLANSQRSDEALPAYHRALDLKPKYARGWLNLGISHANLGRYEEAARCYLRALRLNPEAGHMWGYLRVTFTSMERFDLVQLAGQQDPSLFEAEF 234
            AENDEDK AI CLERAV++DP++L ALLALGVS VNEL+   AL+ LKAWV+HNPK+ GLEI+VDEYSDGSLMDEV QLMLQA+  D +       D+DV+VVLGVLYNVS DYD+A A+F+ A  +RP +Y+LWNK+GATLANS RS EA+PAYHRAL+LKP+YARGWLNLGISHANLG YEEA +CYL+AL LN  A H+W YLR+ FT MERFDLV++A  +D + F  EF
Sbjct:  441 AENDEDKSAIICLERAVEEDPYNLSALLALGVSNVNELNPQGALKTLKAWVQHNPKFHGLEIQVDEYSDGSLMDEVMQLMLQARAHDPS-------DSDVQVVLGVLYNVSKDYDAAVASFKAATDSRPDEYALWNKIGATLANSARSSEAIPAYHRALELKPRYARGWLNLGISHANLGNYEEATKCYLQALSLNNRADHIWSYLRICFTCMERFDLVKIADTKDIARFREEF 667
[Close]
BLAST of EWM20982.1 vs. NCBI_GenBank
Match: gi|566013511|gb|ETI36422.1| (hypothetical protein F443_17442 [Phytophthora parasitica P1569] >gi|566013512|gb|ETI36423.1| hypothetical protein, variant [Phytophthora parasitica P1569])

HSP 1 Score: 330.102 bits (845), Expect = 2.309e-106
Identity = 160/234 (68.38%), Postives = 191/234 (81.62%), Query Frame = 0 
Query:    1 AENDEDKRAIACLERAVDQDPHSLPALLALGVSYVNELDSVRALQNLKAWVEHNPKYQGLEIRVDEYSDGSLMDEVTQLMLQAQDWDRATCGPEGQDADVEVVLGVLYNVSHDYDSAAAAFRQALVARPSDYSLWNKLGATLANSQRSDEALPAYHRALDLKPKYARGWLNLGISHANLGRYEEAARCYLRALRLNPEAGHMWGYLRVTFTSMERFDLVQLAGQQDPSLFEAEF 234
            AENDEDK AI CLERAV++DP++L ALLALGVS VNEL+   AL+ LKAWV+HNPK+ GLEI+VDEYSDGSLMDEV QLMLQA+  D +       D+DV+VVLGVLYNVS DYD+A A+F+ A  +RP +Y+LWNK+GATLANS RS EA+PAYHRAL+LKP+YARGWLNLGISHANLG YEEA +CYL+AL LN  A H+W YLR+ FT MERFDLV++A  +D + F  EF
Sbjct:  441 AENDEDKSAIICLERAVEEDPYNLSALLALGVSNVNELNPQGALKTLKAWVQHNPKFHGLEIQVDEYSDGSLMDEVMQLMLQARAHDPS-------DSDVQVVLGVLYNVSKDYDAAVASFKAATDSRPDEYALWNKIGATLANSARSSEAIPAYHRALELKPRYARGWLNLGISHANLGNYEEATKCYLQALSLNNRADHIWSYLRICFTCMERFDLVKIADTKDIARFREEF 667
[Close]
BLAST of EWM20982.1 vs. NCBI_GenBank
Match: gi|301103296|ref|XP_002900734.1| (peroxisomal targeting signal 1 receptor, putative [Phytophthora infestans T30-4] >gi|262101489|gb|EEY59541.1| peroxisomal targeting signal 1 receptor, putative [Phytophthora infestans T30-4])

HSP 1 Score: 327.791 bits (839), Expect = 1.991e-105
Identity = 158/234 (67.52%), Postives = 191/234 (81.62%), Query Frame = 0 
Query:    1 AENDEDKRAIACLERAVDQDPHSLPALLALGVSYVNELDSVRALQNLKAWVEHNPKYQGLEIRVDEYSDGSLMDEVTQLMLQAQDWDRATCGPEGQDADVEVVLGVLYNVSHDYDSAAAAFRQALVARPSDYSLWNKLGATLANSQRSDEALPAYHRALDLKPKYARGWLNLGISHANLGRYEEAARCYLRALRLNPEAGHMWGYLRVTFTSMERFDLVQLAGQQDPSLFEAEF 234
            AENDEDK AI CLERAV++DP++L ALLALGVS VNEL+   AL+ LKAWV+HNPK+ GLEI+VDEYSDGSLMDEV QLMLQA+  D +       D+DV+VVLGVLYNVS DYD+A ++F+ A  ++P +Y+LWNK+GATLANS RS EA+PAYHRAL+LKP+YARGWLNLGISHANLG YEEA +CYL+AL LN  A H+W YLR+ FT MERFDLV++A  +D + F  EF
Sbjct:  436 AENDEDKSAIICLERAVEEDPYNLSALLALGVSNVNELNPQGALKTLKAWVQHNPKFHGLEIQVDEYSDGSLMDEVMQLMLQARAHDPS-------DSDVQVVLGVLYNVSKDYDAAVSSFKAATDSQPDEYALWNKIGATLANSARSSEAIPAYHRALELKPRYARGWLNLGISHANLGNYEEATKCYLQALSLNNRADHIWSYLRICFTCMERFDLVKIADTKDIARFREEF 662
[Close]
BLAST of EWM20982.1 vs. NCBI_GenBank
Match: gi|695397500|ref|XP_009521756.1| (hypothetical protein PHYSODRAFT_556029 [Phytophthora sojae] >gi|348686653|gb|EGZ26468.1| hypothetical protein PHYSODRAFT_556029 [Phytophthora sojae])

HSP 1 Score: 325.865 bits (834), Expect = 1.241e-104
Identity = 159/234 (67.95%), Postives = 189/234 (80.77%), Query Frame = 0 
Query:    1 AENDEDKRAIACLERAVDQDPHSLPALLALGVSYVNELDSVRALQNLKAWVEHNPKYQGLEIRVDEYSDGSLMDEVTQLMLQAQDWDRATCGPEGQDADVEVVLGVLYNVSHDYDSAAAAFRQALVARPSDYSLWNKLGATLANSQRSDEALPAYHRALDLKPKYARGWLNLGISHANLGRYEEAARCYLRALRLNPEAGHMWGYLRVTFTSMERFDLVQLAGQQDPSLFEAEF 234
            AENDEDK AI CLERAV++DP++L ALLALGVS VNEL+   AL+ LKAWV+HNPK+ GLEI+VDEYSDGSLMDEV QLMLQA+  D +       D+DV+VVLGVLYNVS DYD+A   F+ A  +RP +Y+LWNK+GATLANS RS EA+PAYHRAL+LKP+YARGWLNLGISHANLG YEEA +CYL+AL LN  A H+W YLR+ FT MERFDLV++A  +D + F  EF
Sbjct:  442 AENDEDKSAIICLERAVEEDPYNLSALLALGVSNVNELNPQGALKTLKAWVQHNPKFHGLEIQVDEYSDGSLMDEVMQLMLQARAHDPS-------DSDVQVVLGVLYNVSKDYDAAVECFKVATDSRPDEYALWNKIGATLANSARSSEAIPAYHRALELKPRYARGWLNLGISHANLGNYEEATKCYLQALSLNNRADHIWSYLRICFTCMERFDLVKVADTRDIAHFREEF 668
[Close]
BLAST of EWM20982.1 vs. NCBI_GenBank
Match: gi|1214708130|gb|OWZ19447.1| (Peroxisomal targeting signal 1 receptor [Phytophthora megakarya])

HSP 1 Score: 321.242 bits (822), Expect = 4.297e-103
Identity = 158/234 (67.52%), Postives = 187/234 (79.91%), Query Frame = 0 
Query:    1 AENDEDKRAIACLERAVDQDPHSLPALLALGVSYVNELDSVRALQNLKAWVEHNPKYQGLEIRVDEYSDGSLMDEVTQLMLQAQDWDRATCGPEGQDADVEVVLGVLYNVSHDYDSAAAAFRQALVARPSDYSLWNKLGATLANSQRSDEALPAYHRALDLKPKYARGWLNLGISHANLGRYEEAARCYLRALRLNPEAGHMWGYLRVTFTSMERFDLVQLAGQQDPSLFEAEF 234
            AENDEDK AI CLERAV++DP++L ALLALGVS VNEL+   AL+ LKAWV+HNPK+ GLEI VDEYSDGSLMDEV QLMLQA+  D +       D+DV+VVLGVLYNVS DYD+A  +F+ A  +R  +Y+LWNK+GATLANS RS EA+PAYHRAL+LKP+YARGWLNLGISHANLG YEEA +CYL+AL LN  A H+W YLR  FT MERFDLV++A  +D + F  EF
Sbjct:  426 AENDEDKSAIICLERAVEEDPYNLSALLALGVSNVNELNPQGALKTLKAWVQHNPKFHGLEIMVDEYSDGSLMDEVMQLMLQARAHDPS-------DSDVQVVLGVLYNVSKDYDAAVESFKAATDSRSDEYALWNKIGATLANSARSSEAIPAYHRALELKPRYARGWLNLGISHANLGNYEEATKCYLQALSLNNRADHIWSYLRNCFTCMERFDLVKVADTKDIARFREEF 652
[Close]
BLAST of EWM20982.1 vs. NCBI_GenBank
Match: gi|1173926812|gb|OQR80951.1| (peroxisomal targeting signal 1 receptor [Achlya hypogyna])

HSP 1 Score: 318.546 bits (815), Expect = 1.212e-102
Identity = 157/236 (66.53%), Postives = 187/236 (79.24%), Query Frame = 0 
Query:    1 AENDEDKRAIACLERAVDQDPHSLPALLALGVSYVNELDSVRALQNLKAWVEHNPKYQGLEIRV--DEYSDGSLMDEVTQLMLQAQDWDRATCGPEGQDADVEVVLGVLYNVSHDYDSAAAAFRQALVARPSDYSLWNKLGATLANSQRSDEALPAYHRALDLKPKYARGWLNLGISHANLGRYEEAARCYLRALRLNPEAGHMWGYLRVTFTSMERFDLVQLAGQQDPSLFEAEF 234
            AENDEDK+AI CL RAV++DP++L ALLALGVS VNEL+S  ALQ L++WV+HNPK+ GLE+ V  D Y DGSLMDEV QLMLQAQ  D         D+DV+VVLGVLYNVS DYD+A   FR A  ARP +YSLWNKLGATLANS RS+EA+P YHRAL++KPKYARGWLNLGISHANLG+Y+EAA+CYL+AL  N +A H+WGYLR+ FT +ERFDLV+    +D   F+ EF
Sbjct:  364 AENDEDKKAITCLNRAVEEDPYNLQALLALGVSNVNELNSHGALQTLQSWVQHNPKFHGLEVHVADDMYGDGSLMDEVMQLMLQAQSHDPL-------DSDVQVVLGVLYNVSKDYDAAVRCFRSASSARPQEYSLWNKLGATLANSSRSNEAIPTYHRALEIKPKYARGWLNLGISHANLGQYDEAAKCYLQALHQNDQAEHIWGYLRIAFTCLERFDLVKKTDMKDVFAFQDEF 592
The following BLAST results are available for this feature:
BLAST of EWM20982.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100977|gb|EWM20982.1|4.244e-173100.00peroxisomal targeting signal 1 receptor, partial [... [more]
gi|298708252|emb|CBJ48315.1|2.143e-11072.22conserved unknown protein [Ectocarpus siliculosus][more]
gi|675174051|ref|XP_008895910.1|1.727e-10668.38hypothetical protein PPTG_03877 [Phytophthora para... [more]
gi|567950990|gb|ETK76697.1|1.745e-10668.38hypothetical protein L915_16963 [Phytophthora para... [more]
gi|568009141|gb|ETL83352.1|1.842e-10668.38hypothetical protein L917_16701 [Phytophthora para... [more]
gi|566013511|gb|ETI36422.1|2.309e-10668.38hypothetical protein F443_17442 [Phytophthora para... [more]
gi|301103296|ref|XP_002900734.1|1.991e-10567.52peroxisomal targeting signal 1 receptor, putative ... [more]
gi|695397500|ref|XP_009521756.1|1.241e-10467.95hypothetical protein PHYSODRAFT_556029 [Phytophtho... [more]
gi|1214708130|gb|OWZ19447.1|4.297e-10367.52Peroxisomal targeting signal 1 receptor [Phytophth... [more]
gi|1173926812|gb|OQR80951.1|1.212e-10266.53peroxisomal targeting signal 1 receptor [Achlya hy... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9722rna9722Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications