EWM29716.1, cds969 (CDS) Nannochloropsis gaditana

Overview
NameEWM29716.1
Unique Namecds969
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:859390..859430 +
Alignment locationCM002456.1:859653..859692 +
Alignment locationCM002456.1:861343..861695 +
Alignment locationCM002456.1:861744..861840 +

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Properties
Property NameValue
Protein idEWM29716.1
Productprotein phosphatase 1 regulatory subunit 14d
Orig transcript idgnl|cribi|Naga_100124g17.8337.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:859390..859430 +
CM002456.1supercontigCM002456.1:859653..859692 +
CM002456.1supercontigCM002456.1:861343..861695 +
CM002456.1supercontigCM002456.1:861744..861840 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0008152metabolic process
GO:0042325regulation of phosphorylation
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR008025PP1_inhibitor
Homology
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BLAST of EWM29716.1 vs. NCBI_GenBank
Match: gi|585112294|gb|EWM29716.1| (protein phosphatase 1 regulatory subunit 14d [Nannochloropsis gaditana])

HSP 1 Score: 363.614 bits (932), Expect = 2.898e-127
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0 
Query:    1 MGNFDVAPLLMKAKSRVWGFTRLLLCKLASGIFTQLSDRALRPIATTMENISKKLDNKTLTGRYDMKQLIKVQQVEQWFMSCLVELYKVDDEDKLPINFDLLEVIEMSKDKRPTFLAEKMTECPSDVQPAIKELLAKIDELNIQLFVRQRRSRAGKDVEKFQFLYPHVRYRTSGKE 176
            MGNFDVAPLLMKAKSRVWGFTRLLLCKLASGIFTQLSDRALRPIATTMENISKKLDNKTLTGRYDMKQLIKVQQVEQWFMSCLVELYKVDDEDKLPINFDLLEVIEMSKDKRPTFLAEKMTECPSDVQPAIKELLAKIDELNIQLFVRQRRSRAGKDVEKFQFLYPHVRYRTSGKE
Sbjct:    1 MGNFDVAPLLMKAKSRVWGFTRLLLCKLASGIFTQLSDRALRPIATTMENISKKLDNKTLTGRYDMKQLIKVQQVEQWFMSCLVELYKVDDEDKLPINFDLLEVIEMSKDKRPTFLAEKMTECPSDVQPAIKELLAKIDELNIQLFVRQRRSRAGKDVEKFQFLYPHVRYRTSGKE 176
The following BLAST results are available for this feature:
BLAST of EWM29716.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112294|gb|EWM29716.1|2.898e-127100.00protein phosphatase 1 regulatory subunit 14d [Nann... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna969rna969Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications