EWM20983.1, cds9687 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20983.1 vs. NCBI_GenBank
Match: gi|585100978|gb|EWM20983.1| (hypothetical protein Naga_100487g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 489.96 bits (1260), Expect = 5.118e-175 Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0
Query: 1 MTRGRQALEMMPASAKSRSCCQAAVARPTSSILLAAGLLLTTSAVAASVPLRVSNAFLPAPQHQSLHSVHGHSSPSCCERRHQAGPPSPPSSPSPPSVIRRQAMLPPFDSPLDPATLEGMAAASSAAGSTGGALNEVTSEQLWVGFIAGVFPFVWAGFEFWKRIDVQQRCGVCQGSGLVYENASGKSLSVPRKCYACGGFLPWAGWRRFWLSNLDIGNGGVLQRPAADYEALSEAAKRRRAGG 243
MTRGRQALEMMPASAKSRSCCQAAVARPTSSILLAAGLLLTTSAVAASVPLRVSNAFLPAPQHQSLHSVHGHSSPSCCERRHQAGPPSPPSSPSPPSVIRRQAMLPPFDSPLDPATLEGMAAASSAAGSTGGALNEVTSEQLWVGFIAGVFPFVWAGFEFWKRIDVQQRCGVCQGSGLVYENASGKSLSVPRKCYACGGFLPWAGWRRFWLSNLDIGNGGVLQRPAADYEALSEAAKRRRAGG
Sbjct: 1 MTRGRQALEMMPASAKSRSCCQAAVARPTSSILLAAGLLLTTSAVAASVPLRVSNAFLPAPQHQSLHSVHGHSSPSCCERRHQAGPPSPPSSPSPPSVIRRQAMLPPFDSPLDPATLEGMAAASSAAGSTGGALNEVTSEQLWVGFIAGVFPFVWAGFEFWKRIDVQQRCGVCQGSGLVYENASGKSLSVPRKCYACGGFLPWAGWRRFWLSNLDIGNGGVLQRPAADYEALSEAAKRRRAGG 243
BLAST of EWM20983.1 vs. NCBI_GenBank
Match: gi|298715203|emb|CBJ27875.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 119.398 bits (298), Expect = 3.120e-30 Identity = 52/85 (61.18%), Postives = 65/85 (76.47%), Query Frame = 0
Query: 158 FEFWKRIDVQQRCGVCQGSGLVYENASGKSLSVPRKCYACGGFLPWAGWRRFWLSNLDIGNGGVLQRPAADYEALSEAAKRRRAG 242
+EF KRI Q+ C VC+GSGLV + SGK L P+KCYACGGFLPW W +FW +N+D+GNGGVLQRPA DY+ L+EAA+ + G
Sbjct: 68 YEFGKRIVTQRACEVCKGSGLVSTSRSGKQLRQPKKCYACGGFLPWESWGKFWKTNMDVGNGGVLQRPARDYDELNEAARAAKDG 152
BLAST of EWM20983.1 vs. NCBI_GenBank
Match: gi|1199291524|gb|OUS46616.1| (hypothetical protein BE221DRAFT_191790 [Ostreococcus tauri]) HSP 1 Score: 96.2857 bits (238), Expect = 4.045e-21 Identity = 48/102 (47.06%), Postives = 60/102 (58.82%), Query Frame = 0
Query: 136 EVTSEQLWVGFIAGVFPFVWAGFEFWKRIDVQQRCGVCQGSGLVYENASGKSLSVPRKCYACGGFLPWAGWRRFWLSNLDIGNGGVLQRPAADYEALSEAAK 237
EV QLW GFIAG+ PF A +EF KR+ +Q+RC C G+GLV G+ + KC ACGGFLPW W RF S ++GNGGV++ P A K
Sbjct: 60 EVEQWQLWFGFIAGLSPFAIAAYEFGKRVLIQKRCARCAGAGLVVLGDDGRKV----KCPACGGFLPWESWERFLTS--EVGNGGVVRAPKGQTSAFYSVEK 155
BLAST of EWM20983.1 vs. NCBI_GenBank
Match: gi|308810122|ref|XP_003082370.1| (unnamed protein product [Ostreococcus tauri] >gi|116060838|emb|CAL57316.1| unnamed product [Ostreococcus tauri]) HSP 1 Score: 93.9745 bits (232), Expect = 1.238e-20 Identity = 48/102 (47.06%), Postives = 60/102 (58.82%), Query Frame = 0
Query: 136 EVTSEQLWVGFIAGVFPFVWAGFEFWKRIDVQQRCGVCQGSGLVYENASGKSLSVPRKCYACGGFLPWAGWRRFWLSNLDIGNGGVLQRPAADYEALSEAAK 237
EV QLW GFIAG+ PF A +EF KR+ +Q+RC C G+GLV G+ + KC ACGGFLPW W RF S ++GNGGV++ P A K
Sbjct: 30 EVEQWQLWFGFIAGLSPFAIAAYEFGKRVLIQKRCARCAGAGLVVLGDDGRKV----KCPACGGFLPWESWERFLTS--EVGNGGVVRAPKGQTSAFYSVEK 125
BLAST of EWM20983.1 vs. NCBI_GenBank
Match: gi|145352682|ref|XP_001420667.1| (predicted protein [Ostreococcus lucimarinus CCE9901] >gi|144580902|gb|ABO98960.1| predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 95.1301 bits (235), Expect = 1.527e-20 Identity = 51/102 (50.00%), Postives = 61/102 (59.80%), Query Frame = 0
Query: 137 VTSEQLWVGFIAGVFPFVWAGFEFWKRIDVQQRCGVCQGSGLV-YENASGKSLSVPRKCYACGGFLPWAGWRRFWLSNLDIGNGGVLQRPAADYEALSEAAK 237
V + QLW GFIAGV PF A +EF KR+ +Q+RC +C GSGLV E + G L KC ACGGFLPW W RF S + GNGGV++ P A K
Sbjct: 60 VEAWQLWFGFIAGVSPFAIAAYEFGKRVLIQRRCALCAGSGLVEVERSRGARLV---KCTACGGFLPWQSWERFLSS--EAGNGGVVRAPKGQTSAFYSVEK 156
BLAST of EWM20983.1 vs. NCBI_GenBank
Match: gi|612393254|ref|XP_007512147.1| (predicted protein [Bathycoccus prasinos] >gi|424513613|emb|CCO66235.1| predicted protein [Bathycoccus prasinos]) HSP 1 Score: 93.2041 bits (230), Expect = 1.508e-19 Identity = 48/109 (44.04%), Postives = 64/109 (58.72%), Query Frame = 0
Query: 141 QLWVGFIAGVFPFVWAGFEFWKRIDVQQRCGVCQGSGLVYENASGKSLSVPRKCYACGGFLPWAGWRRFWL--SNLDIGNGGVLQRPAA------DYEALSEAAKRRRA 241
QL+ GF AG+ PF+ A +EF KRI +Q++C +CQGSGL+ K RKC ACGGFLPW W RF + IGNGG ++ P D E A+++R+A
Sbjct: 89 QLYFGFFAGIAPFIIAAYEFGKRILIQRKCALCQGSGLI------KKGEYARKCTACGGFLPWESWERFLDVGTTAKIGNGGRVRVPEGQTSVFYDVEKTVLASEKRKA 191
BLAST of EWM20983.1 vs. NCBI_GenBank
Match: gi|159475006|ref|XP_001695614.1| (hypothetical protein CHLREDRAFT_205653 [Chlamydomonas reinhardtii] >gi|158275625|gb|EDP01401.1| predicted protein [Chlamydomonas reinhardtii]) HSP 1 Score: 93.2041 bits (230), Expect = 1.007e-18 Identity = 45/92 (48.91%), Postives = 54/92 (58.70%), Query Frame = 0
Query: 141 QLWVGFIAGVFPFVWAGFEFWKRIDVQQRCGVCQGSGLVYENASGKSLSVPRKCYACGGFLPWAGWRRFWLSNLDIGNGGVLQRPAADYEAL 232
++W+GFIAGV PF +EF KRI +Q RC VC G GLV +GK + RKC CGGF PW W+ F S GNGG LQ+P L
Sbjct: 170 EIWLGFIAGVVPFAIGSYEFGKRILIQLRCEVCGGRGLVPSGGAGKDKYL-RKCPQCGGFFPWISWQMFLSSTATPGNGGPLQQPRGQTSVL 260
BLAST of EWM20983.1 vs. NCBI_GenBank
Match: gi|1004138858|gb|KXZ46869.1| (hypothetical protein GPECTOR_40g603 [Gonium pectorale]) HSP 1 Score: 90.8929 bits (224), Expect = 1.282e-18 Identity = 45/92 (48.91%), Postives = 53/92 (57.61%), Query Frame = 0
Query: 141 QLWVGFIAGVFPFVWAGFEFWKRIDVQQRCGVCQGSGLVYENASGKSLSVPRKCYACGGFLPWAGWRRFWLSNLDIGNGGVLQRPAADYEAL 232
++W+GF+AGV PF +EF KRI +Q RC VC G GLV GK L RKC CGGF PW W+ F S GNGG LQ+P L
Sbjct: 74 EIWIGFVAGVVPFAIGSYEFGKRIIIQLRCEVCGGRGLVPSAGPGKYL---RKCPQCGGFFPWISWKMFLSSTAAPGNGGPLQQPRGQTSVL 162
BLAST of EWM20983.1 vs. NCBI_GenBank
Match: gi|303270961|ref|XP_003054842.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|226462816|gb|EEH60094.1| predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 90.5077 bits (223), Expect = 2.242e-17 Identity = 49/111 (44.14%), Postives = 66/111 (59.46%), Query Frame = 0
Query: 126 AAGSTGGALNE--VTSEQLWVGFIAGVFPFVWAGFEFWKRIDVQQRCGVCQGSGLVYENASGKSLSVPRKCYACGGFLPWAGWRRFWLSNLDIGNGGVLQRPAADYEALSE 234
AA S AL++ V Q++ G +AG+ PFV A +EF KRI +Q+RC +CQGSGL+ K RKC +CGGFLPW W F+ S + GNGG L++P A +
Sbjct: 92 AASSMADALSDTGVPEWQIYYGAVAGLSPFVIAAYEFGKRILIQRRCELCQGSGLI------KRGRYSRKCTSCGGFLPWESWELFFTS--EAGNGGALRQPKGQTSAFYD 194
BLAST of EWM20983.1 vs. NCBI_GenBank
Match: gi|545358422|ref|XP_005644785.1| (hypothetical protein COCSUDRAFT_54440 [Coccomyxa subellipsoidea C-169] >gi|384246752|gb|EIE20241.1| hypothetical protein COCSUDRAFT_54440 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 83.5741 bits (205), Expect = 1.876e-16 Identity = 44/102 (43.14%), Postives = 54/102 (52.94%), Query Frame = 0
Query: 141 QLWVGFIAGVFPFVWAGFEFWKRIDVQQRCGVCQGSGLVYENASGKSLSVPRKCYACGGFLPWAGWRRFWLSNLDIGNGGVLQRPAADYEALSEAAKRRRAG 242
++WVG IA PFV +EF KRI +Q+RC CQGSGLV RKC CGGF PW GW +F+ S GNGG L+ P + +R G
Sbjct: 35 EIWVGTIAACVPFVIGSWEFGKRIIIQRRCSRCQGSGLVMRG------QFARKCPDCGGFFPWQGWWKFFTSTAAPGNGGPLRAPKGQSSVFYKVPSKRENG 130 The following BLAST results are available for this feature:
BLAST of EWM20983.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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