EWM20990.1, cds9681 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20990.1 vs. NCBI_GenBank
Match: gi|585100986|gb|EWM20990.1| (microcystin synthetase-associated thioesterase [Nannochloropsis gaditana]) HSP 1 Score: 696.427 bits (1796), Expect = 0.000e+0 Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 0
Query: 1 MRLICLNDVLFVPSLSFPSHRLTSSYIERERSQDPMGCGSSCCIPPYVSKAIEVHAAAEPKKASDAPTDSQSTFKAGPRRPVMSEAMAQKWLLSNGKPVAGAKVRIICLGWAGANSNVFKTWDLKCGEVVKVELPSRNARFNDKPIHDVNILAKKISQACFVMGYLESTTPLVIFGHSFGAMIGLHLARIMKKEYDYTPKMCIFGGCRPLHRWGFPMSYYKEDDDEMIQSMVDCGGMTKEMAKDKLLVSSVLAGIKMDHLCMDRYVFNEKAEKLEAPLWLIGGLDDPRSPPEQLPEWDRYTTCSIQIKTFPGGHFFLKEKEADVLAWLGKVIEE 334
MRLICLNDVLFVPSLSFPSHRLTSSYIERERSQDPMGCGSSCCIPPYVSKAIEVHAAAEPKKASDAPTDSQSTFKAGPRRPVMSEAMAQKWLLSNGKPVAGAKVRIICLGWAGANSNVFKTWDLKCGEVVKVELPSRNARFNDKPIHDVNILAKKISQACFVMGYLESTTPLVIFGHSFGAMIGLHLARIMKKEYDYTPKMCIFGGCRPLHRWGFPMSYYKEDDDEMIQSMVDCGGMTKEMAKDKLLVSSVLAGIKMDHLCMDRYVFNEKAEKLEAPLWLIGGLDDPRSPPEQLPEWDRYTTCSIQIKTFPGGHFFLKEKEADVLAWLGKVIEE
Sbjct: 1 MRLICLNDVLFVPSLSFPSHRLTSSYIERERSQDPMGCGSSCCIPPYVSKAIEVHAAAEPKKASDAPTDSQSTFKAGPRRPVMSEAMAQKWLLSNGKPVAGAKVRIICLGWAGANSNVFKTWDLKCGEVVKVELPSRNARFNDKPIHDVNILAKKISQACFVMGYLESTTPLVIFGHSFGAMIGLHLARIMKKEYDYTPKMCIFGGCRPLHRWGFPMSYYKEDDDEMIQSMVDCGGMTKEMAKDKLLVSSVLAGIKMDHLCMDRYVFNEKAEKLEAPLWLIGGLDDPRSPPEQLPEWDRYTTCSIQIKTFPGGHFFLKEKEADVLAWLGKVIEE 334
BLAST of EWM20990.1 vs. NCBI_GenBank
Match: gi|585112398|gb|EWM29817.1| (microcystin synthetase-associated thioesterase [Nannochloropsis gaditana]) HSP 1 Score: 225.328 bits (573), Expect = 3.697e-67 Identity = 138/340 (40.59%), Postives = 195/340 (57.35%), Query Frame = 0
Query: 36 MGCGSS-----CCIP--------PYVSKAIEVHAA--AEPKKASDAPTDSQSTFKA--------------------------GPRRPV-MSEAMAQKWLLSNGKPVAGAKVRIICLGWAGANSNVFKTWDLKCGEVVKVELPSRNARFNDKPIHDVNILAKKISQACFVMGYLESTTPLVIFGHSFGAMIGLHLARIMKKEYDYTPKMCIFGGCRPLH-RWGFPMSYYKEDDDEMIQSMVDCGGMTKEMAKDKLLVSSVLAGIKMDHLCMDRYVFNEKAEKLEAPLWLIGGLDDPRSPPEQLPEWDRYTTCSIQIKTFPGGHFFLKEKEADVLAWLGKVI 332
MGC SS CC+P P V A E+ A P + PT SQ +A R P M E A+KWL K A +VR++C +AG NSN +KTWD+K E+V VELP RNAR+N+K I DV ++AKKI+ A +GY+ES PLV FGHSFGA++ +A+I++ +Y+YTPK + GC PLH R G P + +DDE++ S++D GG+TKEMA+++ +V+ L +K D+L +D+YV++E A L+ P+ +G D R P + EW R+TT + + FPGGHFFLK E +V+A++ VI
Sbjct: 41 MGCTSSKGCCLCCVPDAALKSCGPAVPIAKEITNGYPAPPGHGTHTPTHSQGLGEAIQTRTRCISACAVRCIHDHLPGHRHDHQRAPAKMREEEARKWLSVKRKDFA--RVRLVCFPYAGGNSNFYKTWDVKEAEMVTVELPGRNARYNEKVITDVYLIAKKIAAALAGLGYIESKIPLVFFGHSFGAIVSTLVAQILRNQYNYTPKHLVVSGCVPLHLRAGRP-KFSVANDDELVSSLLDMGGITKEMARNRDVVTQFLPALKGDYLAVDKYVYHE-APPLDCPILALGSDQDLRVPQHETEEWARFTTKEFESRIFPGGHFFLKPLEKEVVAYVSSVI 376
BLAST of EWM20990.1 vs. NCBI_GenBank
Match: gi|585101141|gb|EWM21085.1| (thioesterase [Nannochloropsis gaditana]) HSP 1 Score: 152.14 bits (383), Expect = 6.473e-40 Identity = 90/268 (33.58%), Postives = 138/268 (51.49%), Query Frame = 0
Query: 88 AQKWLLSNGKPVAGAKVRIICLGWAGANSNVFKTWDLKCG-EVVKVELPSRNARFNDKPIHDVNILAKKISQACFVMGYLESTTPLVI--------------FGHSFGAMIGLHLARIMKKEYDYTPK-----MCIFGGCRPLHRWGFPMSYYKEDDDEMIQSMVDCGGMTKEMAKDKLLVSSVLAGIKMDHLCMDRYVFNEKAEKLEAPLWLIGGLDDPRSPPEQLPEWDRYTTCS--IQIKTFPGGHFFLKEKEADVLAWLGKVIE 333
A++W + P AK R++CL WAG NS++++TWDL EVV VELP RNAR + P+ + ++L ++ A V+GYL S+ P + FGHSFGAM+ HLA+ +++ + K + + G PL + G DD MIQ +V GG+ E+A + L++ L + D+ +D YV+ L L G +D R+ E + W + TT + FPGGHFF+KE + VL +G+ +
Sbjct: 57 AKRWFVCRA-PRPEAKYRMLCLAWAGGNSSIYRTWDLGSEVEVVAVELPGRNARVKETPLKNFHLLVSRLLHAMEVVGYLPSSAPSFLPSSTSPPPLKPLLLFGHSFGAMLVTHLAQALRERREDEGKSVDVPLVLVSGMAPLDKRGGSTGVSAMSDDAMIQYLVKMGGIPSEVAASRELMNVFLPAFRGDYTAIDNYVYT-PLPALPFRLVAFAGENDARASKEIMEGWVKMTTHEKDFAVDVFPGGHFFIKEHTSMVLERIGQRVR 322
BLAST of EWM20990.1 vs. NCBI_GenBank
Match: gi|504968554|ref|WP_015155656.1| (thioesterase [Chroococcidiopsis thermalis] >gi|428010549|gb|AFY89112.1| Oleoyl-(acyl-carrier-protein) hydrolase [Chroococcidiopsis thermalis PCC 7203]) HSP 1 Score: 130.568 bits (327), Expect = 2.015e-32 Identity = 70/239 (29.29%), Postives = 124/239 (51.88%), Query Frame = 0
Query: 97 KPVAGAKVRIICLGWAGANSNVFKTWDLKCG---EVVKVELPSRNARFNDKPIHDVNILAKKISQACFVMGYLESTTPLVIFGHSFGAMIGLHLARIMKKEYDYTPKMCIFGGCRPLHRWGFPMSYYKEDDDEMIQSMVDCGGMTKEMAKDKLLVSSVLAGIKMDHLCMDRYVFNEKAEKLEAPLWLIGGLDDPRSPPEQLPEWDRYTTCSIQIKTFPGGHFFLKEKEADVLAWLGKVI 332
+P AK+R+ C +AG ++ VF+TW+ EV ++LP R +R + P ++ L + + A F YL+ P V FGHS GA+IG LAR ++ +P G + H P+ + + E +Q + G KE+ ++ ++ ++ ++ D + + YV+ + +LE P+ + GGL+DP + EQL W +T + I+ FPG HFF+ + +L + +V+
Sbjct: 15 QPNPQAKLRLFCFPYAGGSATVFRTWNRDLPSFVEVCPIQLPGRGSRLRETPFTQISPLVQTLGNALF--PYLDK--PYVFFGHSLGALIGFELARYFRRNISSSPIHLFVSGRQAPHIPD-PLPRHALPEQEFLQEIKCLNGTPKEVLENTEMMQLLIPLLRADLVLDEAYVYTSEP-RLECPITVFGGLEDPETNSEQLEAWREHTNTAFSIEMFPGNHFFINTAQPLLLQAIAQVL 247
BLAST of EWM20990.1 vs. NCBI_GenBank
Match: gi|1052324123|emb|SCE89538.1| (medium-chain acyl-[acyl-carrier-protein] hydrolase [Micromonospora chaiyaphumensis]) HSP 1 Score: 130.183 bits (326), Expect = 3.660e-32 Identity = 76/236 (32.20%), Postives = 115/236 (48.73%), Query Frame = 0
Query: 97 KPVAGAKVRIICLGWAGANSNVFKTWDLKCG---EVVKVELPSRNARFNDKPIHDVNILAKKISQACFVMGYLESTTPLVIFGHSFGAMIGLHLARIMKKEYDYTPKMCIFGGCRPLHRWGFPM-SYYKEDDDEMIQSMVDCGGMTKEMAKDKLLVSSVLAGIKMDHLCMDRYVFNEKAEKLEAPLWLIGGLDDPRSPPEQLPEWDRYTTCSIQIKTFPGGHFFLKEKEADVLAWL 328
+P+ GA +R+IC +AG ++VF +W G EV V+LP R +R +P DV L + + G L+ P +FGHS GA++ AR + P +F RP P + DD++I + GG ++ D L+ VL ++ D D YV + L+ P+ +GG DDP +PP L W R+TT ++ F GGHF+L+E D+L L
Sbjct: 24 RPLPGAALRLICFPYAGGGASVFASWPAGTGPDIEVCAVQLPGRESRLGQRPFQDVRTLVSAVEAG--LGGLLDE--PFALFGHSMGALVAFEFARRLAARGRPAPAH-LFVSARPAPHLPRPWPRAHLLPDDQLIDRIRQIGGTPAQVLADARLMRLVLPVLRADFAVNDGYV-HRPGPLLDCPVTALGGRDDPEAPPRVLEAWARHTTGPFRLHRFDGGHFYLREHRDDLLRVL 253
BLAST of EWM20990.1 vs. NCBI_GenBank
Match: gi|299116155|emb|CBN76062.1| (fatty acid-ACP thioesterase [Ectocarpus siliculosus]) HSP 1 Score: 130.183 bits (326), Expect = 3.816e-32 Identity = 80/271 (29.52%), Postives = 132/271 (48.71%), Query Frame = 0
Query: 83 MSEAMAQKWLLSNGKPVAGAKVRIICLGWAGANSNVFKTWDLKCGEVVKV---ELPSRNARFNDKPIHDVNILAKKISQACFVMGYLESTTPLVIFGHSFGAMIGLHLARIMKKEYDYTP-----------KMCIFGGCRPLHRWGFPMSYYKEDDDEMIQSMVDCGGMTKEMAKDKLLVSSVLAGIKMDHLCMDRYVF----NEKAEKLEAPLWLIGGLDDPRSPPEQLPEWDRYTTCSIQIKTFPGGHFFLK-EKEADVLAWLGKVIEE 334
MS + +KW+ + A A +R+ C WAG +++ F W K E V++ ELP R R + + V+ + + ++QA MG L+ P +FGHSFG+++ LAR +K++ P MC+ GG P P+S D ++ ++ GGM +E+ LV L I+ D+ + Y + + + + P+ +GG +D R+P L W T +++ F GGHFFL+ E E VL +LG ++ E
Sbjct: 1 MSSSALEKWVACR-RVKADASIRLFCAAWAGGSASSFNKWTSKLPEAVELHALELPGRMRRSKEDSLTSVSAIVEGVAQALVTMGLLDK--PFALFGHSFGSLVMFELARKLKEDAGKIPVYLIVSGCCPPDMCVGGGSSP------PISQLPRD--ALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAYEGYRYELRPGDDSRPITCPIICLGGEEDGRAPRSDLERWSSLTAAEFRLQMFGGGHFFLQGEGEQAVLTFLGDILTE 260
BLAST of EWM20990.1 vs. NCBI_GenBank
Match: gi|501063191|ref|WP_012114475.1| (thioesterase [Xanthobacter autotrophicus] >gi|154160482|gb|ABS67698.1| Thioesterase [Xanthobacter autotrophicus Py2]) HSP 1 Score: 129.413 bits (324), Expect = 4.054e-32 Identity = 69/232 (29.74%), Postives = 119/232 (51.29%), Query Frame = 0
Query: 104 VRIICLGWAGANSNVFKTWDLKCGEVVKV---ELPSRNARFNDKPIHDVNILAKKISQACFVMGYLESTTPLVIFGHSFGAMIGLHLARIMKKEYDYTPKMCIFGGCRPLHRWGFPMSYYKEDDDEMIQSMVDCGGMTKEMAKDKLLVSSVLAGIKMDHLCMDRYVFNEKAEKLEAPLWLIGGLDDPRSPPEQLPEWDRYTTCSIQIKTFPGGHFFLKEKEADVLAWLGKVI 332
+R++CL AGA++ +F+ W + + V ELP R R+ D+ LA ++ + T PLV++GHS GA++ +AR + ++ + + G P H G P + + D E++ + GG +KE+ L++ L ++ D +D Y F + L P ++GG D +PPE L W + + ++ +PGGHFF++++EA +LA L KVI
Sbjct: 1 MRLVCLPHAGASAALFRPWKVTLSGIATVDSPELPGRGTRYGAPFATDMAALADDLADTLA-----QRTVPLVLYGHSMGALLAFEVARSLARQGVSVAGLVLSGRAAP-HLDGPPRARHTMTDAELVAELTAIGGTSKEVLAQPDLLAMTLPAVRADFRMVDTYAF-KPGPALAVPAIILGGSQDAATPPETLHAWSALISGPLTVELWPGGHFFVRDQEARLLALLAKVI 225
BLAST of EWM20990.1 vs. NCBI_GenBank
Match: gi|929862306|ref|WP_054096230.1| (thioesterase [Thermoactinomyces vulgaris] >gi|928414757|gb|KPC72520.1| hypothetical protein ADL26_14325 [Thermoactinomyces vulgaris]) HSP 1 Score: 127.872 bits (320), Expect = 1.694e-31 Identity = 73/235 (31.06%), Postives = 123/235 (52.34%), Query Frame = 0
Query: 97 KPVAGAKVRIICLGWAGANSNVFKTWDLKCG---EVVKVELPSRNARFNDKPIHDVNILAKKISQACFVMGYLESTTPLVIFGHSFGAMIGLHLARIMKKEYDYTPKMCIFGGCRPLHRWGFPMSY---YKEDDDEMIQSMVDCGGMTKEMAKDKLLVSSVLAGIKMDHLCMDRYVFNEKAEKLEAPLWLIGGLDDPRSPPEQLPEWDRYTTCSIQIKTFPGGHFFLKEKEADVL 325
KP A++R+ C +AG ++++F W + EV V+LP R R ++P+ + L +++ + YL+ P +IFGHS GA+IG LAR +++ P+ I + H P S Y D+E+I + + G +E+ ++ L+ +L I+ D +DRYV+ E+ E L P+ GG++DP E+L W + TT ++ F GGHF+L ++ D L
Sbjct: 13 KPNPQAELRLFCFPYAGGSASIFTQWQARFSNRIEVCPVQLPGRENRLLEEPVSSIERLVPQLADE--LEPYLDQ--PFLIFGHSMGALIGFELARELRRRNRPLPQKLIVSAKQAPH---IPRSKPLGYDFSDEELINQLRELNGTPEEVLANRELMELILPIIRADFALVDRYVYREE-EPLACPILAFGGIEDPDVKQEELAAWQQMTTGGFVMQQFAGGHFYLFQENTDAL 239
BLAST of EWM20990.1 vs. NCBI_GenBank
Match: gi|1082692586|gb|OGA14913.1| (putative thioesterase [Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_63_19] >gi|1082730314|gb|OGA49639.1| putative thioesterase [Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13]) HSP 1 Score: 123.25 bits (308), Expect = 1.478e-29 Identity = 71/240 (29.58%), Postives = 115/240 (47.92%), Query Frame = 0
Query: 98 PVAGAKVRIICLGWAGANSNVFKTWDLKCG---EVVKVELPSRNARFNDKPIHDVNILAKKISQACFVMGYLESTTPLVIFGHSFGAMIGLHLARIMKKEYDYTPKMCIFGGCRPLHRWGFPMSYYKEDDDEMIQSMVDCGGMTKEMAKDKLLVSSVLAGIKMDHLCMDRYVFNEKAEKLEAPLWLIGGLDDPRSPPEQLPEWDRYTTCSIQIKTFPGGHFFLKEKEADVLAWLGKVIEE 334
P A++R+ C +AG ++VF++W EV V+LP R R + P D+ LA+ + A + YL+ P I+GHS GA++ L RI++++ P+ R H Y D E IQ++ GG+ E+ KD+ L+ +L ++ D DRY ++ L P L G DD +PPE + W ++ S + F GGHFFL+ ++ + +E
Sbjct: 16 PNPAARLRLFCFPFAGGGASVFRSWARALPPTIEVCPVQLPGRENRLRESPYTDLRPLAEVL--AGQIQWYLQK--PFAIYGHSMGALLAFELVRILQRQNAPLPRTLFLAAHRAAHLSPRRSPLYALPDKEFIQALHRFGGLQDEVMKDQELLDVLLPTLRADLTLCDRYSYS-PGSPLNCPFQLYVGRDDQEAPPEDMESWREHSAQSSSLCIFSGGHFFLRSDGDALMQAIATELER 250
BLAST of EWM20990.1 vs. NCBI_GenBank
Match: gi|1086583572|emb|SDM25793.1| (Surfactin synthase thioesterase subunit [Dendrosporobacter quercicolus]) HSP 1 Score: 122.865 bits (307), Expect = 1.914e-29 Identity = 72/260 (27.69%), Postives = 132/260 (50.77%), Query Frame = 0
Query: 84 SEAMAQKWLLSNGKPVAGAKVRIICLGWAGANSNVFKTWDLKCGE---VVKVELPSRNARFNDKPIHDVNILAKKISQACFVMGYLESTTPLVIFGHSFGAMIGLHLARIMKKEYDYTPKMCIFGGCR--------PLHRWGFPMSYYKEDDDEMIQSMVDCGGMTKEMAKDKLLVSSVLAGIKMDHLCMDRYVFNEKAEKLEAPLWLIGGLDDPRSPPEQLPEWDRYTTCSIQIKTFPGGHFFLKEKEADVLAWLGKVI 332
+++ WLL+ +P A +R+ CL +AG ++V++ W + E + ++LP R R + P D+ L +IS+A ++ YL+ P ++FGHS GA + +AR ++++++ P I G R PLH G P D I+ + G + + + + L+ L ++ D + YV++ + LE P+ GG DP + +++ W R+T+CS ++ GGHFFL+ +L +GK++
Sbjct: 3 NQSTVTPWLLT--RPDARDIIRVFCLPYAGGGASVYRGWAKELPEGAGIYPIQLPGRENRIAEPPARDMTTLVHEISRA--IVPYLQQ--PFILFGHSLGARLAFEIARNIRRKWNLQPSRLIVSGSRAPEIPEPKPLH--GLP-------DSAFIEELRRFSGTPEAVLQSRELMELFLPVLRADFTVDETYVYSAD-KPLECPISAFGGTKDPEAGSKEVQGWARHTSCSFSLEMLEGGHFFLQTARPALLRSVGKIL 246 The following BLAST results are available for this feature:
BLAST of EWM20990.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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