EWM21014.1, cds9675 (CDS) Nannochloropsis gaditana

Overview
NameEWM21014.1
Unique Namecds9675
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037255.1:204455..204598 -
Alignment locationKK037255.1:204240..204334 -
Alignment locationKK037255.1:203973..204156 -
Alignment locationKK037255.1:203773..203895 -
Alignment locationKK037255.1:203539..203656 -
Alignment locationKK037255.1:203314..203441 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21014.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100081g23.761.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037255.1supercontigKK037255.1:204455..204598 -
KK037255.1supercontigKK037255.1:204240..204334 -
KK037255.1supercontigKK037255.1:203973..204156 -
KK037255.1supercontigKK037255.1:203773..203895 -
KK037255.1supercontigKK037255.1:203539..203656 -
KK037255.1supercontigKK037255.1:203314..203441 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM21014.1 vs. NCBI_GenBank
Match: gi|585101012|gb|EWM21014.1| (hypothetical protein Naga_100081g23 [Nannochloropsis gaditana])

HSP 1 Score: 541.962 bits (1395), Expect = 0.000e+0
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0
Query:    1 MRREVDDSLRGEENWDHPASMNAMCRRTLKIEYWDRSRECKERKWDHMDYIDATYASREEWILQSVLPRDEIVLEENKFPYNTPKGIRHMTLWARRELSLEEVESYMIDWIERERPGVRRWNLDENASRSIQVYHVHIYTQEVPDEEVGPSPSRGDAEDLDDHILSEDAKNGEESDPDDDLEHRSRPRHKAGSLGERRECCLIDGKENRMQAQTIMSGDETVPCMMMSPSGSTRAGLSLRETRYVCVWPKPSPLFRCFPSFPL 263
            MRREVDDSLRGEENWDHPASMNAMCRRTLKIEYWDRSRECKERKWDHMDYIDATYASREEWILQSVLPRDEIVLEENKFPYNTPKGIRHMTLWARRELSLEEVESYMIDWIERERPGVRRWNLDENASRSIQVYHVHIYTQEVPDEEVGPSPSRGDAEDLDDHILSEDAKNGEESDPDDDLEHRSRPRHKAGSLGERRECCLIDGKENRMQAQTIMSGDETVPCMMMSPSGSTRAGLSLRETRYVCVWPKPSPLFRCFPSFPL
Sbjct:    1 MRREVDDSLRGEENWDHPASMNAMCRRTLKIEYWDRSRECKERKWDHMDYIDATYASREEWILQSVLPRDEIVLEENKFPYNTPKGIRHMTLWARRELSLEEVESYMIDWIERERPGVRRWNLDENASRSIQVYHVHIYTQEVPDEEVGPSPSRGDAEDLDDHILSEDAKNGEESDPDDDLEHRSRPRHKAGSLGERRECCLIDGKENRMQAQTIMSGDETVPCMMMSPSGSTRAGLSLRETRYVCVWPKPSPLFRCFPSFPL 263          
BLAST of EWM21014.1 vs. NCBI_GenBank
Match: gi|585101013|gb|EWM21015.1| (hypothetical protein Naga_100081g23 [Nannochloropsis gaditana])

HSP 1 Score: 451.44 bits (1160), Expect = 7.646e-160
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0
Query:    1 MRREVDDSLRGEENWDHPASMNAMCRRTLKIEYWDRSRECKERKWDHMDYIDATYASREEWILQSVLPRDEIVLEENKFPYNTPKGIRHMTLWARRELSLEEVESYMIDWIERERPGVRRWNLDENASRSIQVYHVHIYTQEVPDEEVGPSPSRGDAEDLDDHILSEDAKNGEESDPDDDLEHRSRPRHKAGSLGERRECCLIDGKENRMQAQTIMSGDET 221
            MRREVDDSLRGEENWDHPASMNAMCRRTLKIEYWDRSRECKERKWDHMDYIDATYASREEWILQSVLPRDEIVLEENKFPYNTPKGIRHMTLWARRELSLEEVESYMIDWIERERPGVRRWNLDENASRSIQVYHVHIYTQEVPDEEVGPSPSRGDAEDLDDHILSEDAKNGEESDPDDDLEHRSRPRHKAGSLGERRECCLIDGKENRMQAQTIMSGDET
Sbjct:    1 MRREVDDSLRGEENWDHPASMNAMCRRTLKIEYWDRSRECKERKWDHMDYIDATYASREEWILQSVLPRDEIVLEENKFPYNTPKGIRHMTLWARRELSLEEVESYMIDWIERERPGVRRWNLDENASRSIQVYHVHIYTQEVPDEEVGPSPSRGDAEDLDDHILSEDAKNGEESDPDDDLEHRSRPRHKAGSLGERRECCLIDGKENRMQAQTIMSGDET 221          
BLAST of EWM21014.1 vs. NCBI_GenBank
Match: gi|570318655|gb|ETO66603.1| (hypothetical protein F444_16288 [Phytophthora parasitica P1976])

HSP 1 Score: 135.961 bits (341), Expect = 3.361e-36
Identity = 59/115 (51.30%), Postives = 81/115 (70.43%), Query Frame = 0
Query:   27 RTLKIEYWDRSRECKERKWDHMDYIDATYASREEWILQSVLPRDEIVLEENKFPYNTPKGIRHMTLWARRELSLEEVESYMIDWIERERPGVRRWNLDENASRSIQVYHVHIYTQ 141
            RTL++EYW R+ EC ERKW HM+ +D  + SREE IL + L  +E+VLE N FPY+TP GI H TLW+R E+   E+E ++ +W+ +  P V  WN D+N SRSI ++HVHIY +
Sbjct:   53 RTLRLEYWGRTDECLERKWAHMEMVDEFFGSREEVILATTLSNEEVVLEPNMFPYDTPNGIEHWTLWSRHEMVDTEIEKFVCNWLRKYAPRVESWNYDDNLSRSINIFHVHIYLK 167          
BLAST of EWM21014.1 vs. NCBI_GenBank
Match: gi|675205047|ref|XP_008911408.1| (hypothetical protein PPTG_16325 [Phytophthora parasitica INRA-310] >gi|566014924|gb|ETI37835.1| hypothetical protein F443_16295 [Phytophthora parasitica P1569] >gi|568040420|gb|ETM37878.1| hypothetical protein L914_15684 [Phytophthora parasitica] >gi|568088432|gb|ETN03292.1| hypothetical protein PPTG_16325 [Phytophthora parasitica INRA-310] >gi|570972994|gb|ETP35746.1| hypothetical protein F442_16149 [Phytophthora parasitica P10297])

HSP 1 Score: 135.191 bits (339), Expect = 7.863e-36
Identity = 59/115 (51.30%), Postives = 81/115 (70.43%), Query Frame = 0
Query:   27 RTLKIEYWDRSRECKERKWDHMDYIDATYASREEWILQSVLPRDEIVLEENKFPYNTPKGIRHMTLWARRELSLEEVESYMIDWIERERPGVRRWNLDENASRSIQVYHVHIYTQ 141
            RTL++EYW R+ EC ERKW HM+ +D  + SREE IL + L  +E+VLE N FPY+TP GI H TLW+R E+   E+E ++ +W+ +  P V  WN D+N SRSI ++HVHIY +
Sbjct:   53 RTLRLEYWGRTDECLERKWAHMEMVDEFFESREEVILATTLSNEEVVLEPNMFPYDTPNGIEHWTLWSRHEMVDTEIEKFVCNWLRKYAPRVESWNYDDNLSRSINIFHVHIYLK 167          
BLAST of EWM21014.1 vs. NCBI_GenBank
Match: gi|567952370|gb|ETK78047.1| (hypothetical protein L915_15841 [Phytophthora parasitica] >gi|567981030|gb|ETL31477.1| hypothetical protein L916_15740 [Phytophthora parasitica] >gi|568010542|gb|ETL84730.1| hypothetical protein L917_15543 [Phytophthora parasitica] >gi|570942473|gb|ETP07730.1| hypothetical protein F441_16117 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 134.806 bits (338), Expect = 8.388e-36
Identity = 59/113 (52.21%), Postives = 80/113 (70.80%), Query Frame = 0
Query:   27 RTLKIEYWDRSRECKERKWDHMDYIDATYASREEWILQSVLPRDEIVLEENKFPYNTPKGIRHMTLWARRELSLEEVESYMIDWIERERPGVRRWNLDENASRSIQVYHVHIY 139
            RTL++EYW R+ EC ERKW HM+ +D  + SREE IL + L  +E+VLE N FPY+TP GI H TLW+R E+   E+E ++ +W+ +  P V  WN D+N SRSI ++HVHIY
Sbjct:   53 RTLRLEYWGRTDECLERKWAHMEMVDEFFESREEVILATTLSNEEVVLEPNMFPYDTPNGIEHWTLWSRHEMVDTEIEKFVCNWLRKYAPRVESWNYDDNLSRSINIFHVHIY 165          
BLAST of EWM21014.1 vs. NCBI_GenBank
Match: gi|953498040|emb|CEG40800.1| (hypothetical protein PHALS_10983 [Plasmopara halstedii])

HSP 1 Score: 131.339 bits (329), Expect = 2.014e-34
Identity = 59/113 (52.21%), Postives = 79/113 (69.91%), Query Frame = 0
Query:   27 RTLKIEYWDRSRECKERKWDHMDYIDATYASREEWILQSVLPRDEIVLEENKFPYNTPKGIRHMTLWARRELSLEEVESYMIDWIERERPGVRRWNLDENASRSIQVYHVHIY 139
            RTL++EYW RS EC +RKW HM+ ID ++ SREE IL + L  +E VLE N FPY+TP GI H TLW+R E+   E+E ++ +W+ +    V  WN DEN SRSI ++HVH+Y
Sbjct:   54 RTLRLEYWGRSHECLQRKWAHMEAIDKSFDSREELILATTLSNEESVLERNMFPYDTPSGIEHWTLWSRHEMKEIEIEQFVWNWLRKNALQVDSWNYDENMSRSIDIFHVHVY 166          
BLAST of EWM21014.1 vs. NCBI_GenBank
Match: gi|673051153|ref|XP_008879537.1| (hypothetical protein, variant [Aphanomyces invadans] >gi|574464856|gb|ETV91900.1| hypothetical protein, variant [Aphanomyces invadans])

HSP 1 Score: 130.954 bits (328), Expect = 1.953e-33
Identity = 68/159 (42.77%), Postives = 97/159 (61.01%), Query Frame = 0
Query:    4 EVDDSLRGEENWDHPASMNAM-CRRTLKIEYWDRSRECKERKWDHMDYIDATY-ASREEWILQSVLPRDEIVLEENKFPYNTPKGIRHMTLWARRELSLEEVESYMIDWIERERPGVRRWNLDENASRSIQVYHVHIYTQEVPDEEVGPSPSRGDAEDL 160
            + D+    ++ +D  A +++   RRTL +EYW R+ ECKERKWDH+D +DA    SREE I ++ L      +E N FPY+TPKGI H TLW+R E++  +V+ Y+  WI+R  P +  WN D+N  RSI ++HVH+Y Q      VG     GD+  L
Sbjct:   85 QYDECTYSDDGYDDYAGVDSSRGRRTLYLEYWTRTDECKERKWDHLDELDAQLDVSREEHIYRTTLLGRTSYMEPNMFPYDTPKGIEHWTLWSRLEMNHNDVQEYVEAWIDRNAPHIEAWNYDDNPERSINIFHVHVYLQ------VGAPTCDGDSSVL 237          
BLAST of EWM21014.1 vs. NCBI_GenBank
Match: gi|673051151|ref|XP_008879536.1| (hypothetical protein H310_13697 [Aphanomyces invadans] >gi|574464855|gb|ETV91899.1| hypothetical protein H310_13697 [Aphanomyces invadans])

HSP 1 Score: 131.724 bits (330), Expect = 3.803e-33
Identity = 68/159 (42.77%), Postives = 97/159 (61.01%), Query Frame = 0
Query:    4 EVDDSLRGEENWDHPASMNAM-CRRTLKIEYWDRSRECKERKWDHMDYIDATY-ASREEWILQSVLPRDEIVLEENKFPYNTPKGIRHMTLWARRELSLEEVESYMIDWIERERPGVRRWNLDENASRSIQVYHVHIYTQEVPDEEVGPSPSRGDAEDL 160
            + D+    ++ +D  A +++   RRTL +EYW R+ ECKERKWDH+D +DA    SREE I ++ L      +E N FPY+TPKGI H TLW+R E++  +V+ Y+  WI+R  P +  WN D+N  RSI ++HVH+Y Q      VG     GD+  L
Sbjct:  135 QYDECTYSDDGYDDYAGVDSSRGRRTLYLEYWTRTDECKERKWDHLDELDAQLDVSREEHIYRTTLLGRTSYMEPNMFPYDTPKGIEHWTLWSRLEMNHNDVQEYVEAWIDRNAPHIEAWNYDDNPERSINIFHVHVYLQ------VGAPTCDGDSSVL 287          
BLAST of EWM21014.1 vs. NCBI_GenBank
Match: gi|970648386|gb|KUF87945.1| (hypothetical protein AM587_10015736 [Phytophthora nicotianae])

HSP 1 Score: 137.502 bits (345), Expect = 4.851e-33
Identity = 59/115 (51.30%), Postives = 81/115 (70.43%), Query Frame = 0
Query:   27 RTLKIEYWDRSRECKERKWDHMDYIDATYASREEWILQSVLPRDEIVLEENKFPYNTPKGIRHMTLWARRELSLEEVESYMIDWIERERPGVRRWNLDENASRSIQVYHVHIYTQ 141
            RTL++EYW R+ EC ERKW HM+ +D  + SREE IL + L  +E+VLE N FPY+TP GI H TLW+R E+   E+E ++ +W+ +  P V  WN D+N SRSI ++HVHIY +
Sbjct:   53 RTLRLEYWGRTDECLERKWAHMEMVDEFFESREEVILATTLSNEEVVLEPNMFPYDTPNGIEHWTLWSRHEMVDTEIEKFVCNWLRKYAPRVESWNYDDNLSRSINIFHVHIYLK 167          
BLAST of EWM21014.1 vs. NCBI_GenBank
Match: gi|698817406|ref|XP_009841732.1| (hypothetical protein, variant [Aphanomyces astaci] >gi|574103235|gb|ETV68778.1| hypothetical protein, variant [Aphanomyces astaci])

HSP 1 Score: 129.798 bits (325), Expect = 5.341e-33
Identity = 61/127 (48.03%), Postives = 86/127 (67.72%), Query Frame = 0
Query:   16 DHPASMNAMCRRTLKIEYWDRSRECKERKWDHMDYIDATY-ASREEWILQSVLPRDEIVLEENKFPYNTPKGIRHMTLWARRELSLEEVESYMIDWIERERPGVRRWNLDENASRSIQVYHVHIYTQ 141
            D+ A  ++  RRTL +EYW R+ ECKERKWDH+D +DA    SREE I  + L      +E N FPY+TP+GI H TLW+R E++ ++V++Y+  WI+   P V+ WN D+N  RSI ++HVH+Y Q
Sbjct:  104 DYAALDSSRGRRTLYLEYWSRTDECKERKWDHLDELDAKLDVSREEHIFGTTLLGRTSYMEPNMFPYDTPEGIEHWTLWSRLEMNHDDVKAYVESWIDTNAPHVQAWNYDDNPERSINIFHVHVYLQ 230          
The following BLAST results are available for this feature:
BLAST of EWM21014.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101012|gb|EWM21014.1|0.000e+0100.00hypothetical protein Naga_100081g23 [Nannochlorops... [more]
gi|585101013|gb|EWM21015.1|7.646e-160100.00hypothetical protein Naga_100081g23 [Nannochlorops... [more]
gi|570318655|gb|ETO66603.1|3.361e-3651.30hypothetical protein F444_16288 [Phytophthora para... [more]
gi|675205047|ref|XP_008911408.1|7.863e-3651.30hypothetical protein PPTG_16325 [Phytophthora para... [more]
gi|567952370|gb|ETK78047.1|8.388e-3652.21hypothetical protein L915_15841 [Phytophthora para... [more]
gi|953498040|emb|CEG40800.1|2.014e-3452.21hypothetical protein PHALS_10983 [Plasmopara halst... [more]
gi|673051153|ref|XP_008879537.1|1.953e-3342.77hypothetical protein, variant [Aphanomyces invadan... [more]
gi|673051151|ref|XP_008879536.1|3.803e-3342.77hypothetical protein H310_13697 [Aphanomyces invad... [more]
gi|970648386|gb|KUF87945.1|4.851e-3351.30hypothetical protein AM587_10015736 [Phytophthora ... [more]
gi|698817406|ref|XP_009841732.1|5.341e-3348.03hypothetical protein, variant [Aphanomyces astaci]... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9706rna9706Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications