EWM21003.1, cds9674 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM21003.1 vs. NCBI_GenBank
Match: gi|585101001|gb|EWM21003.1| (hypothetical protein Naga_100081g21 [Nannochloropsis gaditana]) HSP 1 Score: 957.592 bits (2474), Expect = 0.000e+0 Identity = 458/458 (100.00%), Postives = 458/458 (100.00%), Query Frame = 0
Query: 1 MSAQVTTRWAVMLLLPLALQAVNHFKDLNRLEDLELLGLVQKDTGVAEKHLLLGFSSSACEQSVRGLGFPSEYSVLGEHVETGEVMLDRNTELPGVYNISSCNEYVYVPRGGRTREDYDVIKAVDKLQLHNWLFTHLALTMEVINDLPFDVSIKWEDTGRSQAPQDLISIPRGRTSSINTFETHHLRFVSHQPGSEPRQFLRVRVDGSTNTLRLSDFLTEEANQQCLNPQDCGAKTVTTLPNVNNQHGSTDDVQLVEEDMNIWRGRDVENKGRVVRNEVQPKTKPRYTALGFKKTRIPDAVYQVLLNRYHSGEHILEPWPKSDCHTNFFEAPSTMVYLSDAEKADIFSGMMPNLSKWAGGVKLHPTSCYGIRIYHNGSWLREHVDTGDTHIISAIMNVDQDVEEDWLLTFIDHNDNRHFVTLEPGDALYYESASGLHGRPIPLKGKLFANAFVHFKVV 458
MSAQVTTRWAVMLLLPLALQAVNHFKDLNRLEDLELLGLVQKDTGVAEKHLLLGFSSSACEQSVRGLGFPSEYSVLGEHVETGEVMLDRNTELPGVYNISSCNEYVYVPRGGRTREDYDVIKAVDKLQLHNWLFTHLALTMEVINDLPFDVSIKWEDTGRSQAPQDLISIPRGRTSSINTFETHHLRFVSHQPGSEPRQFLRVRVDGSTNTLRLSDFLTEEANQQCLNPQDCGAKTVTTLPNVNNQHGSTDDVQLVEEDMNIWRGRDVENKGRVVRNEVQPKTKPRYTALGFKKTRIPDAVYQVLLNRYHSGEHILEPWPKSDCHTNFFEAPSTMVYLSDAEKADIFSGMMPNLSKWAGGVKLHPTSCYGIRIYHNGSWLREHVDTGDTHIISAIMNVDQDVEEDWLLTFIDHNDNRHFVTLEPGDALYYESASGLHGRPIPLKGKLFANAFVHFKVV
Sbjct: 1 MSAQVTTRWAVMLLLPLALQAVNHFKDLNRLEDLELLGLVQKDTGVAEKHLLLGFSSSACEQSVRGLGFPSEYSVLGEHVETGEVMLDRNTELPGVYNISSCNEYVYVPRGGRTREDYDVIKAVDKLQLHNWLFTHLALTMEVINDLPFDVSIKWEDTGRSQAPQDLISIPRGRTSSINTFETHHLRFVSHQPGSEPRQFLRVRVDGSTNTLRLSDFLTEEANQQCLNPQDCGAKTVTTLPNVNNQHGSTDDVQLVEEDMNIWRGRDVENKGRVVRNEVQPKTKPRYTALGFKKTRIPDAVYQVLLNRYHSGEHILEPWPKSDCHTNFFEAPSTMVYLSDAEKADIFSGMMPNLSKWAGGVKLHPTSCYGIRIYHNGSWLREHVDTGDTHIISAIMNVDQDVEEDWLLTFIDHNDNRHFVTLEPGDALYYESASGLHGRPIPLKGKLFANAFVHFKVV 458
BLAST of EWM21003.1 vs. NCBI_GenBank
Match: gi|585113156|gb|EWM30492.1| (hypothetical protein Naga_100013g87 [Nannochloropsis gaditana]) HSP 1 Score: 236.498 bits (602), Expect = 5.474e-69 Identity = 150/454 (33.04%), Postives = 219/454 (48.24%), Query Frame = 0
Query: 7 TRWAVMLLLPLALQAVNHFKDLNRLEDLELLGLVQKDTGVAEKHLLLGFSSSACEQSVRGLGFPSEYSVL-GEHVETGEVMLDR-NTELPGVYNISSCNEYVYVPRGGRTREDYDVIKAVDKLQLHNWLFTHLAL-TMEVINDLPFDVSIKWEDTGRSQAPQDLISIPRGRTSSINTFETHHLRFVSHQPGSEPRQFLRVRVDGSTNTLRLSDFLTEEANQQCLNPQDCGAKTVTTLPNVNNQHGSTDDVQLVEEDMNIWRGRDVENKGRVVRNEVQPKTKPRYTALGFKKTRIPDAVYQVLLNRY--HSGEHILEPWPKSDCHTNFFEAPSTMVYLSDAEKADIFSGMMPNLSKWAGGVKLHPTSCYGIRIYHNGSWLREHVDTGDTHIISAIMNVDQDVEEDWLLTFIDHNDNRHFVTLEPGDALYYESASGLHGRPIPLKGKLFANAFVHF 455
T +V+ L P AVN+F L+ ++ LG+ GV +K+ L FS+S C + +GFP + L G E ++++ EL +N+S C + G + + I D+ L + + L + + NDL V + WE S ++ + G+ +F F+ + R R + L LS L + G T+ +QL E ++WRGR N R+ +NE+QP T +YT GFKK +P ++ LL H + + EPW K D H NF+E +T+VY + +F + P L W GG KL PTS YGIR Y+NGS LR+HVD G THI+SAI+NV QDV+E W L+ +DH RHF+ + PG+ YESA+ LHGR L+G+ F N F HF
Sbjct: 35 TFLSVVALGPYPAAAVNYFTGLDSFVAMKALGITDG-AGVLQKNTLFSFSNSECVHDLHDIGFPFIFMDLPGATHELANILVETPPNELMSFFNVSDCKSFYSFTAGDSIHDKGNKIVPSDQASLEDAFWHDQRLPNLRIRNDLQRVVDVFWELRDGSLTEFRVVRLNSGQEERFRSFLGD--IFIFRDAYDDMRLLARTVITDGNKPLILSQTLMGK--------------------------GDTETLQLNENQADVWRGRQNTNVARLRQNELQPSTVKKYTGGGFKKMLMPSYLHTRLLEYLARHEDQRMDEPWHKDDLHVNFYEKMTTIVYTDRDMRDIVFKTLKPILESWVGGEKLMPTSTYGIRRYYNGSILRDHVDIGRTHIVSAILNVRQDVDEVWPLSILDHQGRRHFINMAPGEMCLYESATALHGRTQALRGRYFDNLFAHF 459
BLAST of EWM21003.1 vs. NCBI_GenBank
Match: gi|553189959|ref|XP_005855109.1| (prolyl 4-hydroxylase, partial [Nannochloropsis gaditana CCMP526] >gi|422293952|gb|EKU21252.1| prolyl 4-hydroxylase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 235.343 bits (599), Expect = 1.201e-68 Identity = 149/454 (32.82%), Postives = 219/454 (48.24%), Query Frame = 0
Query: 7 TRWAVMLLLPLALQAVNHFKDLNRLEDLELLGLVQKDTGVAEKHLLLGFSSSACEQSVRGLGFPSEYSVL-GEHVETGEVMLDR-NTELPGVYNISSCNEYVYVPRGGRTREDYDVIKAVDKLQLHNWLFTHLAL-TMEVINDLPFDVSIKWEDTGRSQAPQDLISIPRGRTSSINTFETHHLRFVSHQPGSEPRQFLRVRVDGSTNTLRLSDFLTEEANQQCLNPQDCGAKTVTTLPNVNNQHGSTDDVQLVEEDMNIWRGRDVENKGRVVRNEVQPKTKPRYTALGFKKTRIPDAVYQVLLNRY--HSGEHILEPWPKSDCHTNFFEAPSTMVYLSDAEKADIFSGMMPNLSKWAGGVKLHPTSCYGIRIYHNGSWLREHVDTGDTHIISAIMNVDQDVEEDWLLTFIDHNDNRHFVTLEPGDALYYESASGLHGRPIPLKGKLFANAFVHF 455
T +V+ L P AVN+F L+ ++ LG+ GV +K+ L FS++ C + +GFP + L G E ++++ EL +N+S C + G + + I D+ L + + L + + NDL V + WE S ++ + G+ +F F+ + R R + L LS L + G T+ +QL E ++WRGR N R+ +NE+QP T +YT GFKK +P ++ LL H + + EPW K D H NF+E +T+VY + +F + P L W GG KL PTS YGIR Y+NGS LR+HVD G THI+SAI+NV QDV+E W L+ +DH RHF+ + PG+ YESA+ LHGR L+G+ F N F HF
Sbjct: 25 TFLSVVALGPYPAAAVNYFTGLDSFVAMKALGITDG-AGVLQKNTLFSFSNNECVHDLHDIGFPFIFMDLPGATHELANILVETPPNELMSFFNVSDCKSFYSFTAGDSIHDKGNKIVPSDQASLEDAFWHDQRLPNLRIRNDLQRVVDVFWELRDGSLTEFRVVRLNSGQEERFRSFLGDI--FIFRDAYDDMRLLARTVITDGNKPLILSQTLMGK--------------------------GDTETLQLNENQADVWRGRQNTNVARLRQNELQPSTVKKYTGGGFKKMLMPSYLHTRLLEYLARHEDQRMDEPWHKDDLHVNFYEKMTTIVYTDRDMRDIVFKTLKPILESWVGGEKLMPTSTYGIRRYYNGSILRDHVDIGRTHIVSAILNVRQDVDEVWPLSILDHQGRRHFIDMAPGEMCLYESATALHGRTQALRGRYFDNLFAHF 449
BLAST of EWM21003.1 vs. NCBI_GenBank
Match: gi|299473295|emb|CBN77694.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 160.999 bits (406), Expect = 1.075e-40 Identity = 122/426 (28.64%), Postives = 195/426 (45.77%), Query Frame = 0
Query: 43 DTG---VAEKHLLLGFSSSACEQSVRGLG------FPSEYSVLGEHVETGEV-MLDRNTELPGVYN-ISSCNEYVYVPRGGRTREDYDVIKAVDKL-QLHNWLFTHLALTMEVINDLPFDVSIKWEDTGRSQAPQDLISIPRGRTSSINTFETHHLRFVSHQPGSEPRQFLRVRVDGSTNTLRLSDFLTEEANQQCLNPQDCGAKTVTTLPNVNNQHGSTDDVQLVEEDMNIWRGRDVENKGRVVRNEVQPKTKPRYTALGFKKTRIPDAVYQVLLNRYHSGEHILEPWPKSDCHTNFFEAPSTMVYLSDAEKADIFSGMMPNLSKWAGGVKLHPTSCYGIRIYHNGSWLREHVDTGDTHIISAIMNVDQDVEEDWLLTFIDHNDNRHFVTLEPGDALYYESASGLHGRPIPLKGKLFANAFVHFK 456
DTG E +L+ +C LG +P YS++ + + +LD+ P + + C VPR ++ +DK H +++ ++N++ FD+ I ++ P + ++ G + + +++T + ++ + E +F+ V+ G L A + C + CG P +D+ R ++GR+V N QP+ PR+T +GFKK +PD V+ ++ Y + S T A + + K IF G+ P L +W+G V+L T+CYG+R+Y N SWL HVDT TH +S IM VDQDVEEDW L DH N + +T++P D + YESA+ +HGRP G +ANAFVHFK
Sbjct: 55 DTGERFAREGMVLVHKGDESCAPDFDTLGLSVFGKYPDMYSLVSVDADHADKELLDKLGVDPAILSEPKKCPSLSVVPRRSTVAAPAVILPTLDKRGSYHLNTVKTQQVSVGIVNEMGFDLDIHYQWWDEPVKPTHIRTLTPGTENWMLSYKTTLVLALNKETQEEVSRFV-VKGHG----------LFTVAERSC-TAETCGTSEGAETP----------------QDIASRNARRQMDQGRLVNNRKQPEGLPRFTEVGFKKITVPDDVWDLVKTYYEENKRRSGLRTTSSPTTWRRRATWSTCRENGKLKEQIFGGLRPILEEWSG-VELVQTACYGVRVYTNTSWLANHVDTKATHAVSVIMQVDQDVEEDWPLMIYDHAGNDYNITMKPRDLVLYESATCVHGRPSTFHGNYYANAFVHFK 451
BLAST of EWM21003.1 vs. NCBI_GenBank
Match: gi|224008891|ref|XP_002293404.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220970804|gb|EED89140.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 147.902 bits (372), Expect = 1.326e-35 Identity = 82/207 (39.61%), Postives = 118/207 (57.00%), Query Frame = 0
Query: 263 WRGRDVENKGRVVRNEVQPKTKPRYTALGFKKTRIPDAVYQVLLNRYHSGEHIL-----EPWPKSDCHTNFFEAPSTMVYLSDAE--------KADIFSGMMPNLSKWAGGVKLHPTSCYGIRIYHNGSWLREHVDTGDTHIISAIMNVDQDVEEDWLLTFIDHNDNRHFVTLEPGDALYYESASGLHGRPIPLKGKLFANAFVHFK 456
W D E + RV N QP YT LGF K R P V ++L + + E WPK + +TN +E+P+ M+ + DA + +++ L +W G V+L P+S YG+R+Y G+ L HVD + +ISAI+NV QDV+E+W L H+ N + +T+EPGD + YES S LHGRP PLKG+ +AN F+HF+
Sbjct: 126 WLCTDTE-RDRVEMNLRQPSGMYNYTTLGFHKQRAPAKVIKLLTTFWEQNSQSISEIPDEVWPKGNTYTNHWESPTKMLNIGDASLVGGGGSIRTEVWDATKEVLEQWTG-VELSPSSLYGVRVYQEGAVLAPHVDR-NPLVISAIVNVAQDVDEEWPLEVYGHDGNAYNITMEPGDIILYESHSILHGRPFPLKGRHYANVFIHFE 329
BLAST of EWM21003.1 vs. NCBI_GenBank
Match: gi|522049543|ref|WP_020560752.1| (hypothetical protein [Thiothrix flexilis]) HSP 1 Score: 143.665 bits (361), Expect = 2.821e-34 Identity = 75/180 (41.67%), Postives = 108/180 (60.00%), Query Frame = 0
Query: 282 KTKPRYTALGFKKTRIPDAVYQVLLNRYHSGE--HILEPWPKSDCHTNFFEA-----PSTMVYLSDAEKADIFSGMMPNLSKWAGGVKLHPTSCYGIRIYHNGSWLREHVDTGDTHIISAIMNVDQDVEEDWLLTFIDHNDNRHFVTLEPGDALYYESASGLHGRPIPLKGKLFANAFVH 454
K P +T GFKKTR+PD ++Q + Y G+ +LE +D + + P+ M+ LSDA + IF+ + P L +W ++L P++ YGIR Y G+ L+ HVD DTH +S I+NV Q V++DW L DH H VT++PGD ++YESA HGRP PL+G+ +AN F H
Sbjct: 290 KQLPLFTPEGFKKTRLPDDLFQTITEFYQQGKANMVLE---VNDSIGTYIQTTTERHPAKMIELSDALRQTIFTTICPLLEEWTQ-LELKPSAIYGIREYQRGATLKMHVDRIDTHQVSMIINVAQQVDQDWFLHIADHKGKIHKVTMQPGDVIFYESARLQHGRPEPLEGEYYANIFAH 465
BLAST of EWM21003.1 vs. NCBI_GenBank
Match: gi|1210519689|dbj|GAX21458.1| (hypothetical protein FisN_10Hh037 [Fistulifera solaris]) HSP 1 Score: 138.272 bits (347), Expect = 1.330e-32 Identity = 77/200 (38.50%), Postives = 112/200 (56.00%), Query Frame = 0
Query: 267 DVENKGRVVRNEVQPKTKPRYTALGFKKTRIPDAVYQVLLNRYHSG--EHILEPWPKSDCHTNFFEAPSTMVYLSDAE--------KADIFSGMMPNLSKWAGGVKLHPTSCYGIRIYHNGSWLREHVDTGDTHIISAIMNVDQDVEEDWLLTFIDHNDNRHFVTLEPGDALYYESASGLHGRPIPLKGKLFANAFVHFK 456
D R+ + QP++ YT+ GFKK + P AV +LL+ ++ + E WP + + N + +P+ MV + D K DI+ + + +W G ++ +P S YGIRIY +G+ L H D + S I+NV QDV+E W L D N+N VT+EPGD + YES S +HGRP LKGK FAN F+HF+
Sbjct: 71 DTTEDDRIAMDIYQPQSMVNYTSTGFKKIKAPKAVMDLLLDHWNKNNQDRKEERWPAGNIYVNHWASPTYMVSVEDQSLRGGGYKLKTDIWDAVKSTIEEWTG-MEQNPISMYGIRIYTDGAILNPHADRLPL-VSSCIINVAQDVDEPWPLEVYDRNNNAVNVTMEPGDMVLYESGSLIHGRPFALKGKYFANIFIHFE 268
BLAST of EWM21003.1 vs. NCBI_GenBank
Match: gi|219129514|ref|XP_002184932.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403717|gb|EEC43668.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 137.502 bits (345), Expect = 2.671e-32 Identity = 95/274 (34.67%), Postives = 134/274 (48.91%), Query Frame = 0
Query: 203 VRVDGSTNTLRLSDFLTEEANQQCLNPQDCGAKTVTTLPNVNNQHGSTDDVQLVEEDMNIWRGR--------DVENKGRVVRNEVQPKTKPRYTALGFKKTRIPDAVYQVLLNRYHSGEHIL----EPWPKSDCHTNFFEAPSTMVYLSD--------AEKADIFSGMMPNLSKWAGGVKLHPTSCYGIRIYHNGSWLREHVDTGDTHIISAIMNVDQDVEEDWLLTFIDHNDNRHFVTLEPGDALYYESASGLHGRPIPLKGKLFANAFVHFK 456
+R GS L L+ FL A+ Q DC + N N G D Q+ E+ M R R D R+ + QP++ YT GFKK R P++V +L + L E WP + N +E+P+ M + D A K ++ + P + W G ++ P S YGIR Y G+ L HVD + S I+NVDQDV+EDW L D +D +T++PGD + YES S +HGRP PLKG+ +AN F+HF+
Sbjct: 4 IRFVGSA--LFLTAFLAVCAHSQADYGVDCSFPIHSKEFNCGNLLG--DRKQIYEDFMEGCRKRYSTRASRCDSTEDDRIEMSLRQPQSMVNYTETGFKKIRAPNSVMDLLNAHWKRNRDGLYDREEIWPAGSIYVNHWESPTYMSAVEDTNTRGGGYALKKAVWDAVKPVVEAWTG-MEQKPISMYGIRAYTEGAILSPHVDRLPL-VSSCIINVDQDVDEDWPLEVYDRHDRAVNITMQPGDLVLYESGSLMHGRPFPLKGRFYANIFIHFE 271
BLAST of EWM21003.1 vs. NCBI_GenBank
Match: gi|1210523865|dbj|GAX17189.1| (hypothetical protein FisN_10Lh037 [Fistulifera solaris]) HSP 1 Score: 137.117 bits (344), Expect = 2.935e-32 Identity = 76/200 (38.00%), Postives = 112/200 (56.00%), Query Frame = 0
Query: 267 DVENKGRVVRNEVQPKTKPRYTALGFKKTRIPDAVYQVLLNRYHSGEHIL--EPWPKSDCHTNFFEAPSTMVYLSDAE--------KADIFSGMMPNLSKWAGGVKLHPTSCYGIRIYHNGSWLREHVDTGDTHIISAIMNVDQDVEEDWLLTFIDHNDNRHFVTLEPGDALYYESASGLHGRPIPLKGKLFANAFVHFK 456
D R+ + QP++ YT+ GFKK + P AV +LL+ ++ + E WP + + N + +P+ MV + D K DI+ + + +W G ++ +P S YGIR+Y +G+ L H D + S I+NV QDV+E W L D N+N VT+EPGD + YES S +HGRP LKGK FAN F+HF+
Sbjct: 71 DTTEDDRIAMDIYQPQSMVNYTSTGFKKIKAPKAVMDLLLDHWNKNKQDRKEERWPAGNIYVNHWSSPTYMVSVEDHSLRGGGYKLKTDIWDAVKSTIEEWTG-MEQNPISMYGIRVYTDGAILNPHADRLPL-VSSCIINVAQDVDEPWPLEVYDRNNNAVNVTMEPGDMVLYESGSLIHGRPFALKGKYFANIFIHFE 268
BLAST of EWM21003.1 vs. NCBI_GenBank
Match: gi|1210519688|dbj|GAX21457.1| (hypothetical protein FisN_10Hh036 [Fistulifera solaris]) HSP 1 Score: 136.732 bits (343), Expect = 4.056e-32 Identity = 76/200 (38.00%), Postives = 109/200 (54.50%), Query Frame = 0
Query: 267 DVENKGRVVRNEVQPKTKPRYTALGFKKTRIPDAVYQVLLNRYHSGEHIL--EPWPKSDCHTNFFEAPSTMVYLSDAE--------KADIFSGMMPNLSKWAGGVKLHPTSCYGIRIYHNGSWLREHVDTGDTHIISAIMNVDQDVEEDWLLTFIDHNDNRHFVTLEPGDALYYESASGLHGRPIPLKGKLFANAFVHFK 456
D R+ N QP++ YT+ GF K R P V +L + + + + E WP + N++E+ + MV + D + K I+ + +W G ++L PTS YGIR+Y +G+ L H D + S I+NVDQDV+E W L D N VT+EPGD + YES S +HGRP PLKG+ FAN F+HF+
Sbjct: 66 DATEADRIDMNNRQPQSMVNYTSTGFMKIRAPKEVMALLTRHWETNKVNMKEEQWPVGSIYVNYWESKTYMVSVEDTKLRGAGATLKEKIWDAAKSTIEQWTG-MELKPTSMYGIRMYTDGAVLSPHADRLPL-VSSCIINVDQDVDEPWPLEVYDRQGNAVNVTMEPGDMVLYESGSLIHGRPFPLKGRFFANIFIHFE 263 The following BLAST results are available for this feature:
BLAST of EWM21003.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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