EWM20999.1, cds9663 (CDS) Nannochloropsis gaditana

Overview
NameEWM20999.1
Unique Namecds9663
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037255.1:178218..179063 -
Alignment locationKK037255.1:177959..178064 -
Alignment locationKK037255.1:177352..177770 -

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Properties
Property NameValue
Protein idEWM20999.1
Productprotein of unknown function DUF1214
Orig transcript idgnl|cribi|Naga_100081g11.746.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037255.1supercontigKK037255.1:178218..179063 -
KK037255.1supercontigKK037255.1:177959..178064 -
KK037255.1supercontigKK037255.1:177352..177770 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR010621DUF1214
Homology
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BLAST of EWM20999.1 vs. NCBI_GenBank
Match: gi|585100997|gb|EWM20999.1| (protein of unknown function DUF1214 [Nannochloropsis gaditana])

HSP 1 Score: 932.554 bits (2409), Expect = 0.000e+0
Identity = 456/456 (100.00%), Postives = 456/456 (100.00%), Query Frame = 0 
Query:    1 MTMTPLCLFPLKEETVFMGVVIGVGATIIFFPLLLRFPPILRKLRTLHTTPLSDVPGCPEHYDEAFTSALFTLPDPNNYLSVYSYLPLDEGIRFRHPRMPVCRYFSLSLYAGLFDPVQDQVPPSLCDMDLVYNLDGSFDVAICDEEERPADISPANWLPRHGVRDALLVVRRYGTLPGQRLDMPSFHSMGPGTPKELKPAHHSFSGPHYAEKAPSHRFQRLLRLLAYLGAVACALLLAGRWSAAEITAMLLVAGAMPAILLRLLYARGRRKAKRVLSDRAYKVNEFTDPPEARVYDADSPKAHPNHKYYSCPFDARQGDLLIIGRIFPGKQRMWTFVVYDECGLPQYQHFTDETLRTSPGAKSHLPGARRRREGTEEPRALDAGREQAGLAYRLVLTTDMRRHSGREENVVDVSRIPQGLVLLRLIYPETREVFERSKPSVTVLCTEDARGHRKQA 456
            MTMTPLCLFPLKEETVFMGVVIGVGATIIFFPLLLRFPPILRKLRTLHTTPLSDVPGCPEHYDEAFTSALFTLPDPNNYLSVYSYLPLDEGIRFRHPRMPVCRYFSLSLYAGLFDPVQDQVPPSLCDMDLVYNLDGSFDVAICDEEERPADISPANWLPRHGVRDALLVVRRYGTLPGQRLDMPSFHSMGPGTPKELKPAHHSFSGPHYAEKAPSHRFQRLLRLLAYLGAVACALLLAGRWSAAEITAMLLVAGAMPAILLRLLYARGRRKAKRVLSDRAYKVNEFTDPPEARVYDADSPKAHPNHKYYSCPFDARQGDLLIIGRIFPGKQRMWTFVVYDECGLPQYQHFTDETLRTSPGAKSHLPGARRRREGTEEPRALDAGREQAGLAYRLVLTTDMRRHSGREENVVDVSRIPQGLVLLRLIYPETREVFERSKPSVTVLCTEDARGHRKQA
Sbjct:    1 MTMTPLCLFPLKEETVFMGVVIGVGATIIFFPLLLRFPPILRKLRTLHTTPLSDVPGCPEHYDEAFTSALFTLPDPNNYLSVYSYLPLDEGIRFRHPRMPVCRYFSLSLYAGLFDPVQDQVPPSLCDMDLVYNLDGSFDVAICDEEERPADISPANWLPRHGVRDALLVVRRYGTLPGQRLDMPSFHSMGPGTPKELKPAHHSFSGPHYAEKAPSHRFQRLLRLLAYLGAVACALLLAGRWSAAEITAMLLVAGAMPAILLRLLYARGRRKAKRVLSDRAYKVNEFTDPPEARVYDADSPKAHPNHKYYSCPFDARQGDLLIIGRIFPGKQRMWTFVVYDECGLPQYQHFTDETLRTSPGAKSHLPGARRRREGTEEPRALDAGREQAGLAYRLVLTTDMRRHSGREENVVDVSRIPQGLVLLRLIYPETREVFERSKPSVTVLCTEDARGHRKQA 456
The following BLAST results are available for this feature:
BLAST of EWM20999.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100997|gb|EWM20999.1|0.000e+0100.00protein of unknown function DUF1214 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9694rna9694Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications