EWM21000.1, cds9658 (CDS) Nannochloropsis gaditana

Overview
NameEWM21000.1
Unique Namecds9658
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037255.1:163176..163332 +
Alignment locationKK037255.1:163590..163743 +
Alignment locationKK037255.1:164004..167006 +
Alignment locationKK037255.1:167135..167747 +
Alignment locationKK037255.1:167833..167919 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21000.1
Productperq amino acid-rich with gyf domain-containing protein 1
Orig transcript idgnl|cribi|Naga_100081g5.747.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037255.1supercontigKK037255.1:163176..163332 +
KK037255.1supercontigKK037255.1:163590..163743 +
KK037255.1supercontigKK037255.1:164004..167006 +
KK037255.1supercontigKK037255.1:167135..167747 +
KK037255.1supercontigKK037255.1:167833..167919 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR003169GYF
Homology
[Close]
BLAST of EWM21000.1 vs. NCBI_GenBank
Match: gi|585100998|gb|EWM21000.1| (perq amino acid-rich with gyf domain-containing protein 1 [Nannochloropsis gaditana])

HSP 1 Score: 2608.56 bits (6760), Expect = 0.000e+0
Identity = 1337/1337 (100.00%), Postives = 1337/1337 (100.00%), Query Frame = 0 
Query:    1 MLGTTSVKPPTVGGAWAQGSLSLKPEDDGKASGGGGGGTLATGSPPTAAKKKVIQFSREQLLALRRPSRLPTDMAEIPTIISVEPLEPMGGGGPLDREETSRHCEGRGHPLGRRGGWEGGGGAGAGGAGGSGDQDFFETMAESTRKFHAEREAFLAQQRKMEGKEAGVEERGMEQESHDNAETFGEGAMGPGDGGGGGLGGIQEGLRELGVREGGGRGKESGLPPATPTPAEEGEAGLSLLARFGLVPSRPPGREAAGPAFSSSPIGFPDPDQHHQTPPVHAHVLGQTGLPQPQQPPQPGHLRVGHQGGDPVAPSVVGTPVNHLQRLGLALPPQGSTVPDSQQQRLLQQQQLQQEQQQQQQRMYQQLRALQQQQQQQHHEQQGRQPQPPPQQDQQERKQQQQEQQQQQQQQQQQQQQQQQQQQQQQQQQLLQQHLARMHQQQHSQMSPSPQSPSQALSRQQHPPSRGPPDAWFYRDPHGKVQGPFKTADMRQWHEAGYFKPGLCMRLGDTEGEFRPLQELYADLSDAFMRPPSVAPTPQQPPAPQILHPSQPQQQPPQQQQAGLSGPLSPAQQQHLAMLQQMDLLQTPQQMQQALYQVRQIALRDAQQQEQLRHLLQLQQQQQSQPPQQQQQQQQQQQQQQQQQQQHQHQHQHQQQHHQQQQQKQQQQQQQKQQQQQQSPPPPPPPPQQHQHQHQQQHQQQQQLYQQQQLHHKMQQQQQQRQQQHQQQHQQQQPQQAPQPQQPQPQQQQQGQEDIHGPRSGQSGPRDDEHRRAAEEYAMLVRLEAEERVRQDTMQRQRQQEQEAARAAAAAEAAAAAASAAAAAAEAKEKRDSHAAEVKRRKEVEEAARVLRQNQQKEKEEEKARQKEREEKEREKGRHSQVGGENSDPYHRGHLDDGAAGTSEEERGSADQKHAPVAPWSGSTSGTPQKSLTEIQKEEERRQRALKEARMAASGGKGGGMSWARATTTQAAHARPKSLAEIQEKEASAAAYASNPAVSAADKRVVSPAIARSTSTSTNGSTGNDSDGAPPPPSGPIHVQLPVSQGKLSQREKKLLLAEQQAEAVRQQHLLLQQQQQPGGAWNRNRDASAKGGGGGGTGLLTAIQGRRRWDWGGEAPAWQAKGKPVKSLLEIQEEEARRAAQEPHQAKGWAARAGVNAPPQRTSAPLAGASLGQVNGRRPGWVVPARPPSHERGSAGAHAASHEDFWGPKAEEKANAQRAPARPVQAPVPAPAPPPSRTDDSFGSAMPSELAAWCGSELRRIANNDDLTLMSFLYTVESPAETRQYLSQYLGSKPEVVNFASEFIKRRASSRDKGMYIGGWCEGGWRHDRGIIQHVH 1337
            MLGTTSVKPPTVGGAWAQGSLSLKPEDDGKASGGGGGGTLATGSPPTAAKKKVIQFSREQLLALRRPSRLPTDMAEIPTIISVEPLEPMGGGGPLDREETSRHCEGRGHPLGRRGGWEGGGGAGAGGAGGSGDQDFFETMAESTRKFHAEREAFLAQQRKMEGKEAGVEERGMEQESHDNAETFGEGAMGPGDGGGGGLGGIQEGLRELGVREGGGRGKESGLPPATPTPAEEGEAGLSLLARFGLVPSRPPGREAAGPAFSSSPIGFPDPDQHHQTPPVHAHVLGQTGLPQPQQPPQPGHLRVGHQGGDPVAPSVVGTPVNHLQRLGLALPPQGSTVPDSQQQRLLQQQQLQQEQQQQQQRMYQQLRALQQQQQQQHHEQQGRQPQPPPQQDQQERKQQQQEQQQQQQQQQQQQQQQQQQQQQQQQQQLLQQHLARMHQQQHSQMSPSPQSPSQALSRQQHPPSRGPPDAWFYRDPHGKVQGPFKTADMRQWHEAGYFKPGLCMRLGDTEGEFRPLQELYADLSDAFMRPPSVAPTPQQPPAPQILHPSQPQQQPPQQQQAGLSGPLSPAQQQHLAMLQQMDLLQTPQQMQQALYQVRQIALRDAQQQEQLRHLLQLQQQQQSQPPQQQQQQQQQQQQQQQQQQQHQHQHQHQQQHHQQQQQKQQQQQQQKQQQQQQSPPPPPPPPQQHQHQHQQQHQQQQQLYQQQQLHHKMQQQQQQRQQQHQQQHQQQQPQQAPQPQQPQPQQQQQGQEDIHGPRSGQSGPRDDEHRRAAEEYAMLVRLEAEERVRQDTMQRQRQQEQEAARAAAAAEAAAAAASAAAAAAEAKEKRDSHAAEVKRRKEVEEAARVLRQNQQKEKEEEKARQKEREEKEREKGRHSQVGGENSDPYHRGHLDDGAAGTSEEERGSADQKHAPVAPWSGSTSGTPQKSLTEIQKEEERRQRALKEARMAASGGKGGGMSWARATTTQAAHARPKSLAEIQEKEASAAAYASNPAVSAADKRVVSPAIARSTSTSTNGSTGNDSDGAPPPPSGPIHVQLPVSQGKLSQREKKLLLAEQQAEAVRQQHLLLQQQQQPGGAWNRNRDASAKGGGGGGTGLLTAIQGRRRWDWGGEAPAWQAKGKPVKSLLEIQEEEARRAAQEPHQAKGWAARAGVNAPPQRTSAPLAGASLGQVNGRRPGWVVPARPPSHERGSAGAHAASHEDFWGPKAEEKANAQRAPARPVQAPVPAPAPPPSRTDDSFGSAMPSELAAWCGSELRRIANNDDLTLMSFLYTVESPAETRQYLSQYLGSKPEVVNFASEFIKRRASSRDKGMYIGGWCEGGWRHDRGIIQHVH
Sbjct:    1 MLGTTSVKPPTVGGAWAQGSLSLKPEDDGKASGGGGGGTLATGSPPTAAKKKVIQFSREQLLALRRPSRLPTDMAEIPTIISVEPLEPMGGGGPLDREETSRHCEGRGHPLGRRGGWEGGGGAGAGGAGGSGDQDFFETMAESTRKFHAEREAFLAQQRKMEGKEAGVEERGMEQESHDNAETFGEGAMGPGDGGGGGLGGIQEGLRELGVREGGGRGKESGLPPATPTPAEEGEAGLSLLARFGLVPSRPPGREAAGPAFSSSPIGFPDPDQHHQTPPVHAHVLGQTGLPQPQQPPQPGHLRVGHQGGDPVAPSVVGTPVNHLQRLGLALPPQGSTVPDSQQQRLLQQQQLQQEQQQQQQRMYQQLRALQQQQQQQHHEQQGRQPQPPPQQDQQERKQQQQEQQQQQQQQQQQQQQQQQQQQQQQQQQLLQQHLARMHQQQHSQMSPSPQSPSQALSRQQHPPSRGPPDAWFYRDPHGKVQGPFKTADMRQWHEAGYFKPGLCMRLGDTEGEFRPLQELYADLSDAFMRPPSVAPTPQQPPAPQILHPSQPQQQPPQQQQAGLSGPLSPAQQQHLAMLQQMDLLQTPQQMQQALYQVRQIALRDAQQQEQLRHLLQLQQQQQSQPPQQQQQQQQQQQQQQQQQQQHQHQHQHQQQHHQQQQQKQQQQQQQKQQQQQQSPPPPPPPPQQHQHQHQQQHQQQQQLYQQQQLHHKMQQQQQQRQQQHQQQHQQQQPQQAPQPQQPQPQQQQQGQEDIHGPRSGQSGPRDDEHRRAAEEYAMLVRLEAEERVRQDTMQRQRQQEQEAARAAAAAEAAAAAASAAAAAAEAKEKRDSHAAEVKRRKEVEEAARVLRQNQQKEKEEEKARQKEREEKEREKGRHSQVGGENSDPYHRGHLDDGAAGTSEEERGSADQKHAPVAPWSGSTSGTPQKSLTEIQKEEERRQRALKEARMAASGGKGGGMSWARATTTQAAHARPKSLAEIQEKEASAAAYASNPAVSAADKRVVSPAIARSTSTSTNGSTGNDSDGAPPPPSGPIHVQLPVSQGKLSQREKKLLLAEQQAEAVRQQHLLLQQQQQPGGAWNRNRDASAKGGGGGGTGLLTAIQGRRRWDWGGEAPAWQAKGKPVKSLLEIQEEEARRAAQEPHQAKGWAARAGVNAPPQRTSAPLAGASLGQVNGRRPGWVVPARPPSHERGSAGAHAASHEDFWGPKAEEKANAQRAPARPVQAPVPAPAPPPSRTDDSFGSAMPSELAAWCGSELRRIANNDDLTLMSFLYTVESPAETRQYLSQYLGSKPEVVNFASEFIKRRASSRDKGMYIGGWCEGGWRHDRGIIQHVH 1337
The following BLAST results are available for this feature:
BLAST of EWM21000.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100998|gb|EWM21000.1|0.000e+0100.00perq amino acid-rich with gyf domain-containing pr... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9689rna9689Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications