EWM21011.1, cds9655 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21011.1 vs. NCBI_GenBank
Match: gi|553182906|ref|XP_005853805.1| (hypothetical protein NGA_0370602 [Nannochloropsis gaditana CCMP526] >gi|553189092|ref|XP_005854929.1| hypothetical protein NGA_0370601 [Nannochloropsis gaditana CCMP526] >gi|422294131|gb|EKU21431.1| hypothetical protein NGA_0370601 [Nannochloropsis gaditana CCMP526] >gi|422295254|gb|EKU22553.1| hypothetical protein NGA_0370602 [Nannochloropsis gaditana CCMP526] >gi|585101009|gb|EWM21011.1| GCK domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 629.402 bits (1622), Expect = 0.000e+0 Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0
Query: 1 MFRFQSCARQAARRAFVSAASMAPRAHQAPHFVAAGITGAGTCLLLAHSMPAQADAALPATDTSSASPSTSFTITARLSKSGASKEEKAKPSQSSSSSEPHPASPEGRPLTPAGDIAAVLSEMEEEDEGRYDSVELEETECPLCHFMRASPCGATWVRWEKCIHFHKSKEEDFVGPCARVTLKLAECIQQHQNDFPPTLRNALLGGADVEEGEGDEAEEKDGAKGVTEGGDKDRGEDILQSSSTSSTGGKSDRLKKNFTLHEDHEETDQSEGDEHPVKSASPGALPPSRSPNGAEEGESEDGNAEGPIKK 310
MFRFQSCARQAARRAFVSAASMAPRAHQAPHFVAAGITGAGTCLLLAHSMPAQADAALPATDTSSASPSTSFTITARLSKSGASKEEKAKPSQSSSSSEPHPASPEGRPLTPAGDIAAVLSEMEEEDEGRYDSVELEETECPLCHFMRASPCGATWVRWEKCIHFHKSKEEDFVGPCARVTLKLAECIQQHQNDFPPTLRNALLGGADVEEGEGDEAEEKDGAKGVTEGGDKDRGEDILQSSSTSSTGGKSDRLKKNFTLHEDHEETDQSEGDEHPVKSASPGALPPSRSPNGAEEGESEDGNAEGPIKK
Sbjct: 1 MFRFQSCARQAARRAFVSAASMAPRAHQAPHFVAAGITGAGTCLLLAHSMPAQADAALPATDTSSASPSTSFTITARLSKSGASKEEKAKPSQSSSSSEPHPASPEGRPLTPAGDIAAVLSEMEEEDEGRYDSVELEETECPLCHFMRASPCGATWVRWEKCIHFHKSKEEDFVGPCARVTLKLAECIQQHQNDFPPTLRNALLGGADVEEGEGDEAEEKDGAKGVTEGGDKDRGEDILQSSSTSSTGGKSDRLKKNFTLHEDHEETDQSEGDEHPVKSASPGALPPSRSPNGAEEGESEDGNAEGPIKK 310
BLAST of EWM21011.1 vs. NCBI_GenBank
Match: gi|922369189|ref|XP_013456759.1| (GCK domain protein [Medicago truncatula] >gi|657389012|gb|KEH30790.1| GCK domain protein [Medicago truncatula]) HSP 1 Score: 60.4622 bits (145), Expect = 4.667e-7 Identity = 24/60 (40.00%), Postives = 34/60 (56.67%), Query Frame = 0
Query: 141 CPLCHFMRASPCGATWVRWEKCIHFHKSKEEDFVGPCARVTLKLAECIQQHQNDFPPTLR 200
C C FM+ C T++ WE C+ + K ED V CA VT KL +C+ +H + + P LR
Sbjct: 47 CGFCLFMKGGGCKDTFINWEDCVKEAEDKNEDLVEKCAEVTAKLKQCMDEHSDYYEPILR 106
BLAST of EWM21011.1 vs. NCBI_GenBank
Match: gi|1117326762|ref|XP_019432150.1| (PREDICTED: actin cytoskeleton-regulatory complex protein PAN1-like [Lupinus angustifolius] >gi|1102722519|gb|OIW21015.1| hypothetical protein TanjilG_27378 [Lupinus angustifolius]) HSP 1 Score: 58.5362 bits (140), Expect = 6.711e-7 Identity = 23/60 (38.33%), Postives = 33/60 (55.00%), Query Frame = 0
Query: 141 CPLCHFMRASPCGATWVRWEKCIHFHKSKEEDFVGPCARVTLKLAECIQQHQNDFPPTLR 200
C C FM+A C ++ WE CI + +ED V CA+VT L +C+ H + + P LR
Sbjct: 55 CGFCLFMKAGGCKDAFIDWENCIEEAEKNKEDIVEKCAKVTAVLKQCMDSHSDYYEPILR 114
BLAST of EWM21011.1 vs. NCBI_GenBank
Match: gi|922369187|ref|XP_013456758.1| (GCK domain protein [Medicago truncatula] >gi|657389011|gb|KEH30789.1| GCK domain protein [Medicago truncatula]) HSP 1 Score: 60.8474 bits (146), Expect = 7.038e-7 Identity = 24/60 (40.00%), Postives = 34/60 (56.67%), Query Frame = 0
Query: 141 CPLCHFMRASPCGATWVRWEKCIHFHKSKEEDFVGPCARVTLKLAECIQQHQNDFPPTLR 200
C C FM+ C T++ WE C+ + K ED V CA VT KL +C+ +H + + P LR
Sbjct: 47 CGFCLFMKGGGCKDTFINWEDCVKEAEDKNEDLVEKCAEVTAKLKQCMDEHSDYYEPILR 106
BLAST of EWM21011.1 vs. NCBI_GenBank
Match: gi|502182887|ref|XP_004517013.1| (PREDICTED: myb-like protein X [Cicer arietinum]) HSP 1 Score: 60.077 bits (144), Expect = 9.345e-7 Identity = 23/60 (38.33%), Postives = 34/60 (56.67%), Query Frame = 0
Query: 141 CPLCHFMRASPCGATWVRWEKCIHFHKSKEEDFVGPCARVTLKLAECIQQHQNDFPPTLR 200
C C FM+ C T+V WE C+ + K ED V C++VT +L +C+ H + + P LR
Sbjct: 59 CGFCLFMKGGGCKDTFVDWENCVKEAEDKNEDLVEKCSQVTARLKQCMDAHSDYYEPILR 118 The following BLAST results are available for this feature:
BLAST of EWM21011.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 5
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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