EWM21022.1, cds9648 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM21022.1 vs. NCBI_GenBank
Match: gi|585101025|gb|EWM21022.1| (hypothetical protein Naga_100271g2 [Nannochloropsis gaditana]) HSP 1 Score: 1653.26 bits (4280), Expect = 0.000e+0 Identity = 800/800 (100.00%), Postives = 800/800 (100.00%), Query Frame = 0
Query: 1 MVSSQAQILQKQNAGSSSNDTPTTLSIVLAKLRNAAIKALNDRGYTDLAEITVAQDKPLGRWGKLASSDAGSNIESGSSLVTLELPPEPLAELVNVMDLYRSLFGITPDPSFRVWPEEINAGFVDQNSAAHIMIFPAFGPNDLVMIEGSFPAARYFSFQTYDGNFSPVGFLRDAHIHPLGTGRNPYFTPPPDGTEEGAGEEAREEGRYRLYLTKDGKRGFRNELGVAKSNFSLGGLVLVIFRIYGVDPSANATDPGLAPWGFVPPIQVRSKLLGDALTALTNSYHVRYASFSVYDLNLPGPLLRSVSDDEFRAFYRILYGNDTWEISYGRNVSLVVVRNRAVLDRCKLDTSESFVVELDQHEPVSDWFGVVYREILPQRLAADTDSQAASLLRSKAGGAVYDESIFDAKQAVCATGQDEGVCDPNPHRVAQTMKMHTPRSDYFMCSPSGIVLVAPPATPDPFSDAGYPALEDRAWDDGTRGKVLPEDAQACAHPTSGEIEGIVRVYSPCAWIHVHVAWQPVKVVPPGQVGVRKAPVSALSTGPVVVGLSVKANTADEAPFIAEVDLCGNTFISDHHWRCSNEPPIDDTWLLPTFQEGPEWKAATRAQCAYCRRGPLPFTSTMSTRTARAPHLFDLSTMDARGIGRPIYKPTHRDGNLRYFSKDGRKFIQPSPLLDEEAKEAWQNWKQAKEDANNAWRAWRLAKEQHRNRTANSNSTLDSIPPGVQHMATNLSTPGGISTVNATVRSPDWRDFSKMSSAVDATLRWSKPRPTQIHGYYCRLVFPNPLGDNERQAGRGAVGV 800
MVSSQAQILQKQNAGSSSNDTPTTLSIVLAKLRNAAIKALNDRGYTDLAEITVAQDKPLGRWGKLASSDAGSNIESGSSLVTLELPPEPLAELVNVMDLYRSLFGITPDPSFRVWPEEINAGFVDQNSAAHIMIFPAFGPNDLVMIEGSFPAARYFSFQTYDGNFSPVGFLRDAHIHPLGTGRNPYFTPPPDGTEEGAGEEAREEGRYRLYLTKDGKRGFRNELGVAKSNFSLGGLVLVIFRIYGVDPSANATDPGLAPWGFVPPIQVRSKLLGDALTALTNSYHVRYASFSVYDLNLPGPLLRSVSDDEFRAFYRILYGNDTWEISYGRNVSLVVVRNRAVLDRCKLDTSESFVVELDQHEPVSDWFGVVYREILPQRLAADTDSQAASLLRSKAGGAVYDESIFDAKQAVCATGQDEGVCDPNPHRVAQTMKMHTPRSDYFMCSPSGIVLVAPPATPDPFSDAGYPALEDRAWDDGTRGKVLPEDAQACAHPTSGEIEGIVRVYSPCAWIHVHVAWQPVKVVPPGQVGVRKAPVSALSTGPVVVGLSVKANTADEAPFIAEVDLCGNTFISDHHWRCSNEPPIDDTWLLPTFQEGPEWKAATRAQCAYCRRGPLPFTSTMSTRTARAPHLFDLSTMDARGIGRPIYKPTHRDGNLRYFSKDGRKFIQPSPLLDEEAKEAWQNWKQAKEDANNAWRAWRLAKEQHRNRTANSNSTLDSIPPGVQHMATNLSTPGGISTVNATVRSPDWRDFSKMSSAVDATLRWSKPRPTQIHGYYCRLVFPNPLGDNERQAGRGAVGV
Sbjct: 1 MVSSQAQILQKQNAGSSSNDTPTTLSIVLAKLRNAAIKALNDRGYTDLAEITVAQDKPLGRWGKLASSDAGSNIESGSSLVTLELPPEPLAELVNVMDLYRSLFGITPDPSFRVWPEEINAGFVDQNSAAHIMIFPAFGPNDLVMIEGSFPAARYFSFQTYDGNFSPVGFLRDAHIHPLGTGRNPYFTPPPDGTEEGAGEEAREEGRYRLYLTKDGKRGFRNELGVAKSNFSLGGLVLVIFRIYGVDPSANATDPGLAPWGFVPPIQVRSKLLGDALTALTNSYHVRYASFSVYDLNLPGPLLRSVSDDEFRAFYRILYGNDTWEISYGRNVSLVVVRNRAVLDRCKLDTSESFVVELDQHEPVSDWFGVVYREILPQRLAADTDSQAASLLRSKAGGAVYDESIFDAKQAVCATGQDEGVCDPNPHRVAQTMKMHTPRSDYFMCSPSGIVLVAPPATPDPFSDAGYPALEDRAWDDGTRGKVLPEDAQACAHPTSGEIEGIVRVYSPCAWIHVHVAWQPVKVVPPGQVGVRKAPVSALSTGPVVVGLSVKANTADEAPFIAEVDLCGNTFISDHHWRCSNEPPIDDTWLLPTFQEGPEWKAATRAQCAYCRRGPLPFTSTMSTRTARAPHLFDLSTMDARGIGRPIYKPTHRDGNLRYFSKDGRKFIQPSPLLDEEAKEAWQNWKQAKEDANNAWRAWRLAKEQHRNRTANSNSTLDSIPPGVQHMATNLSTPGGISTVNATVRSPDWRDFSKMSSAVDATLRWSKPRPTQIHGYYCRLVFPNPLGDNERQAGRGAVGV 800
BLAST of EWM21022.1 vs. NCBI_GenBank
Match: gi|585108896|gb|EWM26805.1| (protein of unknown function DUF1214 [Nannochloropsis gaditana]) HSP 1 Score: 206.068 bits (523), Expect = 4.359e-52 Identity = 125/346 (36.13%), Postives = 186/346 (53.76%), Query Frame = 0
Query: 283 SYHVRYASFSVYDLNLPGPLLRSVSDDEFRAFYRILYGNDTWEISYGRNVSLVVVRNRAVLDRCKLDTSESFVVELD------QHEPVS--DWFGVVYREILPQRLAADTDSQAASLLRSKAGGAVYDESIFDAKQAVCATGQDEGVCDPNPHRVAQTMKMHTPRSDYFMCSPSGIVLVAPPATPDPFSDAGYPALEDRAWDD-GTRGKVLPEDAQACAHPTSGEIEGIVRVYSPCAWIHVHVAWQPVKVVPPGQVGVRKAPVSALSTGPV---------VVGLSVKANTADEAPFIAEVDLCGNTFISDHHWRCSNEPPIDDTWLLPTFQEGPEWKAATRAQCAY 610
+Y +RYAS SVYDL PGP+LR+ D E R FY LYG + WE + RNVS+VV N+A LDRCK+DTSES ++ LD EP S +W+ +VYRE++PQ + + A+ ++ + +Y SI DA++ +C G++ CD NP+R A MK H PR ++ CSPSG++ VA P + D +D T + Q C + + E +V++ P + + Q G + AP +AL+T P+ VVG+S+KA +A F EV++CG +F++D WRC+++P DD WL P F + W+ A+ Y
Sbjct: 501 TYDMRYASLSVYDLRPPGPVLRTFPDAEIRDFYYDLYGAELWEEGFQRNVSMVVASNQAALDRCKVDTSESLILTLDDLEEQASGEPTSPPEWWSIVYRELIPQSQIINGTNAASYGMKEQ---DIYKTSIQDAREIMC--GENGDTCDRNPYRAASIMKEHYPRVSWYTCSPSGVLAVANPVVAFQY---------DTKFDSKATAPRSKQYFYQFCPYTVN---EALVKMMGPST-VTIQGYMQ----------GGKTAPANALATFPLSISNKQPTFVVGVSIKARDPIDAYFKGEVEVCGYSFVTDSKWRCTDQPLADDEWLNPDFNDD-SWQRASYVDDEY 817 HSP 2 Score: 124.79 bits (312), Expect = 1.288e-25 Identity = 67/161 (41.61%), Postives = 86/161 (53.42%), Query Frame = 0
Query: 120 NAGFVDQNSAAHIMIFPAFGPNDLVMIEGSFPAARYFSFQTYDGNFSPVGFLRDAHIHPLGTGRNPYFTPPPDGTEEGAGEEARE------EGRYRLYLTKDGKRGFRNELGVAKSNFSLGGLVLVIFRIYGVDPSANATDPGLAPWGFVPPIQVRSKLLG 274
N F D S H+M+FP FGP+DL MIEG FP +RYFS QTYD NFSP+ L+D + P EG AR+ +GR+++ L+KDG RGF NEL + NFS V+ R+YGVDP A LA WG+ P + + G
Sbjct: 234 NLFFPDAQSVYHLMVFPNFGPSDLAMIEGEFPDSRYFSVQTYDENFSPIAGLKDLEVVP----------------SEGVNSFARKSPLQIRDGRFKIVLSKDGNRGFPNELPINVGNFSSTTTGYVMMRMYGVDPLAKTNANKLAKWGYKDPPTISLRTAG 378
BLAST of EWM21022.1 vs. NCBI_GenBank
Match: gi|553186469|ref|XP_005854425.1| (hypothetical protein NGA_0235800 [Nannochloropsis gaditana CCMP526] >gi|422294638|gb|EKU21938.1| hypothetical protein NGA_0235800 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 118.242 bits (295), Expect = 4.670e-24 Identity = 105/384 (27.34%), Postives = 162/384 (42.19%), Query Frame = 0
Query: 118 EINAGFVDQNSAAHIMIFPAF-GPNDLVMIEGSFPAARYFSFQTYD-GNFSPVGFLRDAHIHPLGTGRNPYFTPPPDGTEEGAGEEAREEGRYRLYLTKDGKRGFRNELGVAKSNFSLGGLVLVIFRIYGVDP-SANATDPGLAPWGFVPPIQVRSKLL----------------------GDALTALTNSY-------------------HVRYASFSVYDLNLPGPLLRSVSDDEFRAFYRILYGND-TWEISYGRNVSLVVVRNRAVLDRCKLDTSESFVVELDQHEPVSDWFGVVYREILPQRLAADTDSQAASLLRSKAGGAVYD-ESIFDAKQAVCATGQDEGVCDPNPHRVAQTMKMHTPRSDYFMCSPSGIVLVAP 455
N F D + H++ P GP D++ IEG +P RYFS+Q+YD + PV +RD I + G NP+ TP GT G ++G+Y++++T +G +G+ NEL S + G V+ R+Y D S + TD WG V P V+ KL G+ + +T + + RY S S YDLN+PGP+L+++ D + FY YG++ W + R +V + A RC T ++ + + +V REIL Q S+ G + +SI + KQA C + G + MK P+ Y+ C G + AP
Sbjct: 199 NFNIAFPDGYAVYHVLFVPKLQGPMDVIRIEGDYPFVRYFSYQSYDPKSLDPVASVRDYEIKSV-RGVNPFATP---GTTLG------DKGKYQVHVTLNGDQGYPNELPTIASGSNATG-AFVLLRVYAYDKQSPDKTD----IWGAVAPPVVKYKLFNPSSGQGGLWYTLDQFDGGGVQGNLVAVITGTLPPSPGGLWTPPFVADFTKSNARYLSLSTYDLNIPGPVLQTLFDSDIVDFYSQYYGSEYLWNLRNSRQYKIVAAADLASAKRCGHLTRDAMFLSTWGQTARVSYPALVLREILSQ--------------SSRIGDTANNTQSIHNIKQA-CESIAGVGAKCETSSFASSVMKNFYPKVTYYDCLQGGKSVAAP 552
BLAST of EWM21022.1 vs. NCBI_GenBank
Match: gi|585102674|gb|EWM22223.1| (hypothetical protein Naga_100312g6 [Nannochloropsis gaditana]) HSP 1 Score: 80.8777 bits (198), Expect = 2.831e-12 Identity = 56/159 (35.22%), Postives = 83/159 (52.20%), Query Frame = 0
Query: 118 EINAGFVDQNSAAHIMIFPAF-GPNDLVMIEGSFPAARYFSFQTYD-GNFSPVGFLRDAHIHPLGTGRNPYFTPPPDGTEEGAGEEAREEGRYRLYLTKDGKRGFRNELGVAKSNFSLGGLVLVIFRIYGVDP-SANATDPGLAPWGFVPPIQVRSKLL 273
N F D + H++ P GP D++ IEG +P RYFS+Q+YD + PV +RD I + G NP+ TP GT G ++G+Y++++T +G +G+ NEL S + G V+ R+Y D S + TD WG V P V+ KL
Sbjct: 53 NFNIAFPDGYAVYHVLFVPKLQGPMDVIRIEGDYPFVRYFSYQSYDPKSLDPVASVRDYEIKSV-RGVNPFATP---GTTLG------DKGKYQVHVTLNGDQGYPNELPTIASGSNATG-AFVLLRVYAYDKQSPDKTD----IWGAVAPPVVKYKLF 196
BLAST of EWM21022.1 vs. NCBI_GenBank
Match: gi|585101524|gb|EWM21339.1| (hypothetical protein Naga_100075g21 [Nannochloropsis gaditana]) HSP 1 Score: 64.6994 bits (156), Expect = 3.936e-7 Identity = 41/129 (31.78%), Postives = 62/129 (48.06%), Query Frame = 0
Query: 136 PAFGPNDLVMIEGSFPAARYFSFQTYDGNFSPVGFLRDAHIHPLGTGRNPYFTPPPDGTEEGAGEEAREEGRYRLYLTKDGKRGFRNELGVAKSNFSLGGLVLVIFRIYGVDPSANATDPGL-APWGFV 263
P ++ I G FP RYFSF YD + + L D I P +G+NP+ + TE+ G Y +Y++KDG +G+ NE+ + + S L+ FR+ +DP A G WG+V
Sbjct: 151 PPHKEEEVYRIRGKFPYVRYFSFTVYDASLQSISTLHDTDIRP-SSGKNPF--NDIEVTEDNMGT-------YEIYVSKDGSKGYPNEMAALRPD-STSPYALLAFRLQLLDPRAGEDRSGKNREWGYV 268 The following BLAST results are available for this feature:
BLAST of EWM21022.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 5
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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