EWM21022.1, cds9648 (CDS) Nannochloropsis gaditana

Overview
NameEWM21022.1
Unique Namecds9648
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037255.1:136679..136800 -
Alignment locationKK037255.1:136379..136583 -
Alignment locationKK037255.1:135589..136082 -
Alignment locationKK037255.1:135372..135396 -
Alignment locationKK037255.1:134646..134888 -
Alignment locationKK037255.1:134380..134558 -
Alignment locationKK037255.1:133885..134270 -
Alignment locationKK037255.1:133060..133808 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21022.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100271g2.8580.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037255.1supercontigKK037255.1:136679..136800 -
KK037255.1supercontigKK037255.1:136379..136583 -
KK037255.1supercontigKK037255.1:135589..136082 -
KK037255.1supercontigKK037255.1:135372..135396 -
KK037255.1supercontigKK037255.1:134646..134888 -
KK037255.1supercontigKK037255.1:134380..134558 -
KK037255.1supercontigKK037255.1:133885..134270 -
KK037255.1supercontigKK037255.1:133060..133808 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM21022.1 vs. NCBI_GenBank
Match: gi|585101025|gb|EWM21022.1| (hypothetical protein Naga_100271g2 [Nannochloropsis gaditana])

HSP 1 Score: 1653.26 bits (4280), Expect = 0.000e+0
Identity = 800/800 (100.00%), Postives = 800/800 (100.00%), Query Frame = 0
Query:    1 MVSSQAQILQKQNAGSSSNDTPTTLSIVLAKLRNAAIKALNDRGYTDLAEITVAQDKPLGRWGKLASSDAGSNIESGSSLVTLELPPEPLAELVNVMDLYRSLFGITPDPSFRVWPEEINAGFVDQNSAAHIMIFPAFGPNDLVMIEGSFPAARYFSFQTYDGNFSPVGFLRDAHIHPLGTGRNPYFTPPPDGTEEGAGEEAREEGRYRLYLTKDGKRGFRNELGVAKSNFSLGGLVLVIFRIYGVDPSANATDPGLAPWGFVPPIQVRSKLLGDALTALTNSYHVRYASFSVYDLNLPGPLLRSVSDDEFRAFYRILYGNDTWEISYGRNVSLVVVRNRAVLDRCKLDTSESFVVELDQHEPVSDWFGVVYREILPQRLAADTDSQAASLLRSKAGGAVYDESIFDAKQAVCATGQDEGVCDPNPHRVAQTMKMHTPRSDYFMCSPSGIVLVAPPATPDPFSDAGYPALEDRAWDDGTRGKVLPEDAQACAHPTSGEIEGIVRVYSPCAWIHVHVAWQPVKVVPPGQVGVRKAPVSALSTGPVVVGLSVKANTADEAPFIAEVDLCGNTFISDHHWRCSNEPPIDDTWLLPTFQEGPEWKAATRAQCAYCRRGPLPFTSTMSTRTARAPHLFDLSTMDARGIGRPIYKPTHRDGNLRYFSKDGRKFIQPSPLLDEEAKEAWQNWKQAKEDANNAWRAWRLAKEQHRNRTANSNSTLDSIPPGVQHMATNLSTPGGISTVNATVRSPDWRDFSKMSSAVDATLRWSKPRPTQIHGYYCRLVFPNPLGDNERQAGRGAVGV 800
            MVSSQAQILQKQNAGSSSNDTPTTLSIVLAKLRNAAIKALNDRGYTDLAEITVAQDKPLGRWGKLASSDAGSNIESGSSLVTLELPPEPLAELVNVMDLYRSLFGITPDPSFRVWPEEINAGFVDQNSAAHIMIFPAFGPNDLVMIEGSFPAARYFSFQTYDGNFSPVGFLRDAHIHPLGTGRNPYFTPPPDGTEEGAGEEAREEGRYRLYLTKDGKRGFRNELGVAKSNFSLGGLVLVIFRIYGVDPSANATDPGLAPWGFVPPIQVRSKLLGDALTALTNSYHVRYASFSVYDLNLPGPLLRSVSDDEFRAFYRILYGNDTWEISYGRNVSLVVVRNRAVLDRCKLDTSESFVVELDQHEPVSDWFGVVYREILPQRLAADTDSQAASLLRSKAGGAVYDESIFDAKQAVCATGQDEGVCDPNPHRVAQTMKMHTPRSDYFMCSPSGIVLVAPPATPDPFSDAGYPALEDRAWDDGTRGKVLPEDAQACAHPTSGEIEGIVRVYSPCAWIHVHVAWQPVKVVPPGQVGVRKAPVSALSTGPVVVGLSVKANTADEAPFIAEVDLCGNTFISDHHWRCSNEPPIDDTWLLPTFQEGPEWKAATRAQCAYCRRGPLPFTSTMSTRTARAPHLFDLSTMDARGIGRPIYKPTHRDGNLRYFSKDGRKFIQPSPLLDEEAKEAWQNWKQAKEDANNAWRAWRLAKEQHRNRTANSNSTLDSIPPGVQHMATNLSTPGGISTVNATVRSPDWRDFSKMSSAVDATLRWSKPRPTQIHGYYCRLVFPNPLGDNERQAGRGAVGV
Sbjct:    1 MVSSQAQILQKQNAGSSSNDTPTTLSIVLAKLRNAAIKALNDRGYTDLAEITVAQDKPLGRWGKLASSDAGSNIESGSSLVTLELPPEPLAELVNVMDLYRSLFGITPDPSFRVWPEEINAGFVDQNSAAHIMIFPAFGPNDLVMIEGSFPAARYFSFQTYDGNFSPVGFLRDAHIHPLGTGRNPYFTPPPDGTEEGAGEEAREEGRYRLYLTKDGKRGFRNELGVAKSNFSLGGLVLVIFRIYGVDPSANATDPGLAPWGFVPPIQVRSKLLGDALTALTNSYHVRYASFSVYDLNLPGPLLRSVSDDEFRAFYRILYGNDTWEISYGRNVSLVVVRNRAVLDRCKLDTSESFVVELDQHEPVSDWFGVVYREILPQRLAADTDSQAASLLRSKAGGAVYDESIFDAKQAVCATGQDEGVCDPNPHRVAQTMKMHTPRSDYFMCSPSGIVLVAPPATPDPFSDAGYPALEDRAWDDGTRGKVLPEDAQACAHPTSGEIEGIVRVYSPCAWIHVHVAWQPVKVVPPGQVGVRKAPVSALSTGPVVVGLSVKANTADEAPFIAEVDLCGNTFISDHHWRCSNEPPIDDTWLLPTFQEGPEWKAATRAQCAYCRRGPLPFTSTMSTRTARAPHLFDLSTMDARGIGRPIYKPTHRDGNLRYFSKDGRKFIQPSPLLDEEAKEAWQNWKQAKEDANNAWRAWRLAKEQHRNRTANSNSTLDSIPPGVQHMATNLSTPGGISTVNATVRSPDWRDFSKMSSAVDATLRWSKPRPTQIHGYYCRLVFPNPLGDNERQAGRGAVGV 800          
BLAST of EWM21022.1 vs. NCBI_GenBank
Match: gi|585108896|gb|EWM26805.1| (protein of unknown function DUF1214 [Nannochloropsis gaditana])

HSP 1 Score: 206.068 bits (523), Expect = 4.359e-52
Identity = 125/346 (36.13%), Postives = 186/346 (53.76%), Query Frame = 0
Query:  283 SYHVRYASFSVYDLNLPGPLLRSVSDDEFRAFYRILYGNDTWEISYGRNVSLVVVRNRAVLDRCKLDTSESFVVELD------QHEPVS--DWFGVVYREILPQRLAADTDSQAASLLRSKAGGAVYDESIFDAKQAVCATGQDEGVCDPNPHRVAQTMKMHTPRSDYFMCSPSGIVLVAPPATPDPFSDAGYPALEDRAWDD-GTRGKVLPEDAQACAHPTSGEIEGIVRVYSPCAWIHVHVAWQPVKVVPPGQVGVRKAPVSALSTGPV---------VVGLSVKANTADEAPFIAEVDLCGNTFISDHHWRCSNEPPIDDTWLLPTFQEGPEWKAATRAQCAY 610
            +Y +RYAS SVYDL  PGP+LR+  D E R FY  LYG + WE  + RNVS+VV  N+A LDRCK+DTSES ++ LD        EP S  +W+ +VYRE++PQ    +  + A+  ++ +    +Y  SI DA++ +C  G++   CD NP+R A  MK H PR  ++ CSPSG++ VA P     +         D  +D   T  +      Q C +  +   E +V++  P   + +    Q          G + AP +AL+T P+         VVG+S+KA    +A F  EV++CG +F++D  WRC+++P  DD WL P F +   W+ A+     Y
Sbjct:  501 TYDMRYASLSVYDLRPPGPVLRTFPDAEIRDFYYDLYGAELWEEGFQRNVSMVVASNQAALDRCKVDTSESLILTLDDLEEQASGEPTSPPEWWSIVYRELIPQSQIINGTNAASYGMKEQ---DIYKTSIQDAREIMC--GENGDTCDRNPYRAASIMKEHYPRVSWYTCSPSGVLAVANPVVAFQY---------DTKFDSKATAPRSKQYFYQFCPYTVN---EALVKMMGPST-VTIQGYMQ----------GGKTAPANALATFPLSISNKQPTFVVGVSIKARDPIDAYFKGEVEVCGYSFVTDSKWRCTDQPLADDEWLNPDFNDD-SWQRASYVDDEY 817          

HSP 2 Score: 124.79 bits (312), Expect = 1.288e-25
Identity = 67/161 (41.61%), Postives = 86/161 (53.42%), Query Frame = 0
Query:  120 NAGFVDQNSAAHIMIFPAFGPNDLVMIEGSFPAARYFSFQTYDGNFSPVGFLRDAHIHPLGTGRNPYFTPPPDGTEEGAGEEARE------EGRYRLYLTKDGKRGFRNELGVAKSNFSLGGLVLVIFRIYGVDPSANATDPGLAPWGFVPPIQVRSKLLG 274
            N  F D  S  H+M+FP FGP+DL MIEG FP +RYFS QTYD NFSP+  L+D  + P                 EG    AR+      +GR+++ L+KDG RGF NEL +   NFS      V+ R+YGVDP A      LA WG+  P  +  +  G
Sbjct:  234 NLFFPDAQSVYHLMVFPNFGPSDLAMIEGEFPDSRYFSVQTYDENFSPIAGLKDLEVVP----------------SEGVNSFARKSPLQIRDGRFKIVLSKDGNRGFPNELPINVGNFSSTTTGYVMMRMYGVDPLAKTNANKLAKWGYKDPPTISLRTAG 378          
BLAST of EWM21022.1 vs. NCBI_GenBank
Match: gi|553186469|ref|XP_005854425.1| (hypothetical protein NGA_0235800 [Nannochloropsis gaditana CCMP526] >gi|422294638|gb|EKU21938.1| hypothetical protein NGA_0235800 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 118.242 bits (295), Expect = 4.670e-24
Identity = 105/384 (27.34%), Postives = 162/384 (42.19%), Query Frame = 0
Query:  118 EINAGFVDQNSAAHIMIFPAF-GPNDLVMIEGSFPAARYFSFQTYD-GNFSPVGFLRDAHIHPLGTGRNPYFTPPPDGTEEGAGEEAREEGRYRLYLTKDGKRGFRNELGVAKSNFSLGGLVLVIFRIYGVDP-SANATDPGLAPWGFVPPIQVRSKLL----------------------GDALTALTNSY-------------------HVRYASFSVYDLNLPGPLLRSVSDDEFRAFYRILYGND-TWEISYGRNVSLVVVRNRAVLDRCKLDTSESFVVELDQHEPVSDWFGVVYREILPQRLAADTDSQAASLLRSKAGGAVYD-ESIFDAKQAVCATGQDEGVCDPNPHRVAQTMKMHTPRSDYFMCSPSGIVLVAP 455
              N  F D  +  H++  P   GP D++ IEG +P  RYFS+Q+YD  +  PV  +RD  I  +  G NP+ TP   GT  G      ++G+Y++++T +G +G+ NEL    S  +  G   V+ R+Y  D  S + TD     WG V P  V+ KL                       G+ +  +T +                    + RY S S YDLN+PGP+L+++ D +   FY   YG++  W +   R   +V   + A   RC   T ++  +          +  +V REIL Q               S+ G    + +SI + KQA C +    G         +  MK   P+  Y+ C   G  + AP
Sbjct:  199 NFNIAFPDGYAVYHVLFVPKLQGPMDVIRIEGDYPFVRYFSYQSYDPKSLDPVASVRDYEIKSV-RGVNPFATP---GTTLG------DKGKYQVHVTLNGDQGYPNELPTIASGSNATG-AFVLLRVYAYDKQSPDKTD----IWGAVAPPVVKYKLFNPSSGQGGLWYTLDQFDGGGVQGNLVAVITGTLPPSPGGLWTPPFVADFTKSNARYLSLSTYDLNIPGPVLQTLFDSDIVDFYSQYYGSEYLWNLRNSRQYKIVAAADLASAKRCGHLTRDAMFLSTWGQTARVSYPALVLREILSQ--------------SSRIGDTANNTQSIHNIKQA-CESIAGVGAKCETSSFASSVMKNFYPKVTYYDCLQGGKSVAAP 552          
BLAST of EWM21022.1 vs. NCBI_GenBank
Match: gi|585102674|gb|EWM22223.1| (hypothetical protein Naga_100312g6 [Nannochloropsis gaditana])

HSP 1 Score: 80.8777 bits (198), Expect = 2.831e-12
Identity = 56/159 (35.22%), Postives = 83/159 (52.20%), Query Frame = 0
Query:  118 EINAGFVDQNSAAHIMIFPAF-GPNDLVMIEGSFPAARYFSFQTYD-GNFSPVGFLRDAHIHPLGTGRNPYFTPPPDGTEEGAGEEAREEGRYRLYLTKDGKRGFRNELGVAKSNFSLGGLVLVIFRIYGVDP-SANATDPGLAPWGFVPPIQVRSKLL 273
              N  F D  +  H++  P   GP D++ IEG +P  RYFS+Q+YD  +  PV  +RD  I  +  G NP+ TP   GT  G      ++G+Y++++T +G +G+ NEL    S  +  G   V+ R+Y  D  S + TD     WG V P  V+ KL 
Sbjct:   53 NFNIAFPDGYAVYHVLFVPKLQGPMDVIRIEGDYPFVRYFSYQSYDPKSLDPVASVRDYEIKSV-RGVNPFATP---GTTLG------DKGKYQVHVTLNGDQGYPNELPTIASGSNATG-AFVLLRVYAYDKQSPDKTD----IWGAVAPPVVKYKLF 196          
BLAST of EWM21022.1 vs. NCBI_GenBank
Match: gi|585101524|gb|EWM21339.1| (hypothetical protein Naga_100075g21 [Nannochloropsis gaditana])

HSP 1 Score: 64.6994 bits (156), Expect = 3.936e-7
Identity = 41/129 (31.78%), Postives = 62/129 (48.06%), Query Frame = 0
Query:  136 PAFGPNDLVMIEGSFPAARYFSFQTYDGNFSPVGFLRDAHIHPLGTGRNPYFTPPPDGTEEGAGEEAREEGRYRLYLTKDGKRGFRNELGVAKSNFSLGGLVLVIFRIYGVDPSANATDPGL-APWGFV 263
            P     ++  I G FP  RYFSF  YD +   +  L D  I P  +G+NP+     + TE+  G        Y +Y++KDG +G+ NE+   + + S     L+ FR+  +DP A     G    WG+V
Sbjct:  151 PPHKEEEVYRIRGKFPYVRYFSFTVYDASLQSISTLHDTDIRP-SSGKNPF--NDIEVTEDNMGT-------YEIYVSKDGSKGYPNEMAALRPD-STSPYALLAFRLQLLDPRAGEDRSGKNREWGYV 268          
The following BLAST results are available for this feature:
BLAST of EWM21022.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 5
Match NameE-valueIdentityDescription
gi|585101025|gb|EWM21022.1|0.000e+0100.00hypothetical protein Naga_100271g2 [Nannochloropsi... [more]
gi|585108896|gb|EWM26805.1|4.359e-5236.13protein of unknown function DUF1214 [Nannochlorops... [more]
gi|553186469|ref|XP_005854425.1|4.670e-2427.34hypothetical protein NGA_0235800 [Nannochloropsis ... [more]
gi|585102674|gb|EWM22223.1|2.831e-1235.22hypothetical protein Naga_100312g6 [Nannochloropsi... [more]
gi|585101524|gb|EWM21339.1|3.936e-731.78hypothetical protein Naga_100075g21 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9679rna9679Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications