EWM21025.1, cds9647 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21025.1 vs. NCBI_GenBank
Match: gi|585101028|gb|EWM21025.1| (Lipase, class 3 [Nannochloropsis gaditana]) HSP 1 Score: 1407.51 bits (3642), Expect = 0.000e+0 Identity = 685/685 (100.00%), Postives = 685/685 (100.00%), Query Frame = 0
Query: 1 MNLILPPGWRCLWWKELSWALVLLFVCLSRRTTSSSLRDARRQQPQHQEPDIFRINGDKHQNLHSDEPAAIIADVGGRGGINAVQKSGQSWHSPAKGLGEGESLEPEKQSSPQENAPLSLHHESVENIYRSPRLQEWLDRVDSTYSADEVDVETSKALALRYLEERSDLNDYERAFHDLAAAYNLTNAHKFPEKALRLTQSMGGETRYPMCEVFKVVGPLRLHCPVVALSLLFVTSTPPSLRLFSTEHDDYFPSFPWRDGDRTAVPPPHVLEDIGIVPDYIEDKALLDRERPVYRWCWRQIVNFYGYTHRWHDLGLERAQKVEEARRDGFPSPPPSRPLPLLPAHPGYGNQRLLWLPEEENRVQRPIGQAFTYYPPSEGKAEGAGGEAELVVVLRGTVFSEEWSSNFRLHEASQDVLRAYGMEGAIIPKGFFAMFQALVPQINAALAAHGRAFKGLTFTGHSLGGSLSLLLGTYYARQHPDLRLSIVTFGAPNVADAVFFERHYDTRINLRQLTYIGSGLLPPDERGASSPPSPHPAYSFGLGDIFAQMPPDCTAVSPCPLFLFPVGDSTLQELKGDMFKRIQLARAPGSVVIHARDLAGRASVDSWLAYEDFAVQADTRLDAGLIATHVCAYACWVSTGGEGAAGEETRCYFPEEGEGRAEGEICDLLLSRSEMFGDWAEEGGW 685
MNLILPPGWRCLWWKELSWALVLLFVCLSRRTTSSSLRDARRQQPQHQEPDIFRINGDKHQNLHSDEPAAIIADVGGRGGINAVQKSGQSWHSPAKGLGEGESLEPEKQSSPQENAPLSLHHESVENIYRSPRLQEWLDRVDSTYSADEVDVETSKALALRYLEERSDLNDYERAFHDLAAAYNLTNAHKFPEKALRLTQSMGGETRYPMCEVFKVVGPLRLHCPVVALSLLFVTSTPPSLRLFSTEHDDYFPSFPWRDGDRTAVPPPHVLEDIGIVPDYIEDKALLDRERPVYRWCWRQIVNFYGYTHRWHDLGLERAQKVEEARRDGFPSPPPSRPLPLLPAHPGYGNQRLLWLPEEENRVQRPIGQAFTYYPPSEGKAEGAGGEAELVVVLRGTVFSEEWSSNFRLHEASQDVLRAYGMEGAIIPKGFFAMFQALVPQINAALAAHGRAFKGLTFTGHSLGGSLSLLLGTYYARQHPDLRLSIVTFGAPNVADAVFFERHYDTRINLRQLTYIGSGLLPPDERGASSPPSPHPAYSFGLGDIFAQMPPDCTAVSPCPLFLFPVGDSTLQELKGDMFKRIQLARAPGSVVIHARDLAGRASVDSWLAYEDFAVQADTRLDAGLIATHVCAYACWVSTGGEGAAGEETRCYFPEEGEGRAEGEICDLLLSRSEMFGDWAEEGGW
Sbjct: 1 MNLILPPGWRCLWWKELSWALVLLFVCLSRRTTSSSLRDARRQQPQHQEPDIFRINGDKHQNLHSDEPAAIIADVGGRGGINAVQKSGQSWHSPAKGLGEGESLEPEKQSSPQENAPLSLHHESVENIYRSPRLQEWLDRVDSTYSADEVDVETSKALALRYLEERSDLNDYERAFHDLAAAYNLTNAHKFPEKALRLTQSMGGETRYPMCEVFKVVGPLRLHCPVVALSLLFVTSTPPSLRLFSTEHDDYFPSFPWRDGDRTAVPPPHVLEDIGIVPDYIEDKALLDRERPVYRWCWRQIVNFYGYTHRWHDLGLERAQKVEEARRDGFPSPPPSRPLPLLPAHPGYGNQRLLWLPEEENRVQRPIGQAFTYYPPSEGKAEGAGGEAELVVVLRGTVFSEEWSSNFRLHEASQDVLRAYGMEGAIIPKGFFAMFQALVPQINAALAAHGRAFKGLTFTGHSLGGSLSLLLGTYYARQHPDLRLSIVTFGAPNVADAVFFERHYDTRINLRQLTYIGSGLLPPDERGASSPPSPHPAYSFGLGDIFAQMPPDCTAVSPCPLFLFPVGDSTLQELKGDMFKRIQLARAPGSVVIHARDLAGRASVDSWLAYEDFAVQADTRLDAGLIATHVCAYACWVSTGGEGAAGEETRCYFPEEGEGRAEGEICDLLLSRSEMFGDWAEEGGW 685
BLAST of EWM21025.1 vs. NCBI_GenBank
Match: gi|553180277|ref|XP_005853377.1| (class 3 [Nannochloropsis gaditana CCMP526] >gi|553191614|ref|XP_005855413.1| class 3 [Nannochloropsis gaditana CCMP526] >gi|422293644|gb|EKU20944.1| class 3 [Nannochloropsis gaditana CCMP526] >gi|422295682|gb|EKU22981.1| class 3 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 130.568 bits (327), Expect = 2.109e-29 Identity = 125/420 (29.76%), Postives = 176/420 (41.90%), Query Frame = 0
Query: 241 LRLFSTEHDDYFPSFPWRDGDRTAVPPPHVLEDIG-IVPDYIEDKALLDRERPVYRWCWRQIVNFYGYTHRWHDLGLERAQKVEEARRDGFPSPPPSRPLPLLPAHPGYGNQRLLWLPEEENRVQRPIGQAFTYYPPSEGKAEGAGGEAELVVVLRGTVFSEEWSSN--FRLHEASQDVLRAYGMEGAIIPKGFFAMFQALVPQINAALAAHGRAFKGLTFTGHSLGGSLSLLLGTYYARQHPDLRLSIVTFGAPNVADAVFFERHYDTRINL--RQLTYIGSGLLPPDERGASSPPSPHPAYSFGLGDIFAQMPPDCTAVSPCPLFLFPVGDSTLQELKGDMFKRIQLARAPGSVVIHARDLAGRASVDSWLAYEDFAVQADTRLDAGLIATHVCAYACWVSTGGEGAAGEETRCYFPE 655
LR F+T + Y D +++P + DIG +P IED+AL+++ER W +R I+N Y Y R G A +PPP P GY +QRL++ + PIGQ+F +VVV+RGT+F + F S + + G+ G + KGFF+ L QI L AH L+F GHSLG + L+ A + PDL + + FGAP D F E+ ++ +NL R YIG+GL+ +S P P FG+GDI Q C V CP P DM I+ G V ++ D+ + W + LD+ A H C+Y CW +G E RCYF E
Sbjct: 7 LRGFTTVKNMYETEKEPAQDDESSLP--VRMADIGHPLPFQIEDQALIEKERQTAYWYYRNILNLYTYVKRCVQAGTATA------------NPPPYVPR-------GYHSQRLIFTSSNGTK-DPPIGQSFV-------------KGTHIVVVMRGTIFKTNLVQDETFEYANPSDPGVTSSGLNGRL-HKGFFSEALTLTQQIEMGLDAH-PTVDLLSFAGHSLGAAYIQLVSPILALRRPDLAVEVWNFGAPPAGDTGFVEQ-FNALLNLRARSFMYIGNGLV-------TSAPVP-----FGIGDIIPQALSLCWPVRGCPGTQNP-----------DMNAAIKYEATGGIVAFYSTDM---PNTQEWNRVDQVVT-----LDSSPSACHGCSYLCWSV---QGLDDPEDRCYFAE 354
BLAST of EWM21025.1 vs. NCBI_GenBank
Match: gi|585108504|gb|EWM26457.1| (class 3 [Nannochloropsis gaditana]) HSP 1 Score: 130.568 bits (327), Expect = 1.843e-28 Identity = 125/420 (29.76%), Postives = 176/420 (41.90%), Query Frame = 0
Query: 241 LRLFSTEHDDYFPSFPWRDGDRTAVPPPHVLEDIG-IVPDYIEDKALLDRERPVYRWCWRQIVNFYGYTHRWHDLGLERAQKVEEARRDGFPSPPPSRPLPLLPAHPGYGNQRLLWLPEEENRVQRPIGQAFTYYPPSEGKAEGAGGEAELVVVLRGTVFSEEWSSN--FRLHEASQDVLRAYGMEGAIIPKGFFAMFQALVPQINAALAAHGRAFKGLTFTGHSLGGSLSLLLGTYYARQHPDLRLSIVTFGAPNVADAVFFERHYDTRINL--RQLTYIGSGLLPPDERGASSPPSPHPAYSFGLGDIFAQMPPDCTAVSPCPLFLFPVGDSTLQELKGDMFKRIQLARAPGSVVIHARDLAGRASVDSWLAYEDFAVQADTRLDAGLIATHVCAYACWVSTGGEGAAGEETRCYFPE 655
LR F+T + Y D +++P + DIG +P IED+AL+++ER W +R I+N Y Y R G A+ PPP P GY +QRL++ + PIGQ+F +VVV+RGT+F + F S + + G+ G + KGFF+ L QI L AH L+F GHSLG + L+ A + PDL + + FGAP D F E+ ++ +NL R YIG+GL+ +S P P FG+GDI Q C V CP P DM I+ G V ++ D+ + W + LD+ A H C+Y CW +G E RCYF E
Sbjct: 145 LRGFTTVKNMYETEKEPAQDDESSLP--VRMADIGHPLPFQIEDQALIEKERQTAYWYYRNILNLYTYVKRCVQAGTATAK------------PPPYVPR-------GYHSQRLIFTSSNGTK-DPPIGQSFV-------------KGTHIVVVMRGTIFKTNLVQDETFEYANPSDPGVTSSGLNGRL-HKGFFSEALTLTQQIEMGLDAHP-TVDLLSFAGHSLGAAYIQLVSPILALRRPDLAVEVWNFGAPPAGDTGFVEQ-FNALLNLRARSFMYIGNGLV-------TSAPVP-----FGIGDIIPQALSLCWPVRGCPGTQNP-----------DMNAAIKYEATGGIVAFYSTDM---PNTQEWNRVDQVVT-----LDSSPSACHGCSYLCW---SVQGLDDPEDRCYFAE 492
BLAST of EWM21025.1 vs. NCBI_GenBank
Match: gi|585105507|gb|EWM24145.1| (Lipase, class 3 [Nannochloropsis gaditana]) HSP 1 Score: 117.857 bits (294), Expect = 1.353e-24 Identity = 102/354 (28.81%), Postives = 152/354 (42.94%), Query Frame = 0
Query: 331 PSPPPSRPLPL--LPAHPGYGNQRLLWLPE--EENRV---------QRPIGQAFTYYPPSEGKAEGAGGEAELVVVLRGTVFSEEWSSNFRLHEASQDVLRAYGMEGAIIPKGFFAMFQALVPQINAALAAHGRAFKGLTFTGHSLGGSLSLLLGTYYARQHPDLRLSIVTFGAPNVADAVFFERHYDTRINLRQLTYIGSGLL-PPDERGASSPPSPHPAYSFGLGDIFAQMPPDCTAVSPCPLFLFPVGDSTLQELKGDMFKRIQLARAPGSVVIHARDLAGRASVDSWLAYEDFAVQADTRLDA--GLIATHVCAYACWVSTGGEGAAGEETRCYFPEEGEGRAEGEICDL 668
P+P + P+ L L G G+ ++ PE E V + PIGQ+FT E +VV+ RGT+F W ++F+ A+ G+ G + G A SLGG++S + + + H L++ VTFG+P V D F + + +NLR+ Y+GSG L P +RG ++G+GD+ QMP C +S P +S D + Q A G+V +A DL + + WL E+F A D G +A H+C+YACW S E +TRCYFP +G A GE+C +
Sbjct: 91 PNPEGALPMELEALNGKDGQGSMPMMIPPELWENQNVYFLKDPGGWKWPIGQSFTR-------------EQRMVVIFRGTMFPGGWETDFQTSYAAAAATARRGLPGRV------------------HYGQCGWA---------SLGGAISQVAAAFLVKHHRHLKIDCVTFGSPQVGDRTFTD-FLNANVNLRRAVYVGSGQLNEPVQRG----------LNYGMGDVITQMPLACYNLS------IPFCESMKFIENPDNLESFQFVMAAGNVPFYASDL---RNTEGWLKKENFFFGARKFRDIPEGTMACHICSYACWTS---EATGDSDTRCYFPGQGVQEA-GELCSV 380
BLAST of EWM21025.1 vs. NCBI_GenBank
Match: gi|585109275|gb|EWM27098.1| (lipase family protein [Nannochloropsis gaditana]) HSP 1 Score: 107.842 bits (268), Expect = 5.477e-21 Identity = 123/454 (27.09%), Postives = 177/454 (38.99%), Query Frame = 0
Query: 201 SMGGETRYPMCEVFKVVGPLRLHCPVVALSLLFVTSTPPSLRLFSTEHDDYFPSFPWRDGDRTAVPP----PHVLEDIGIVPDYIEDKALLDRERPVYRWCWRQIVNFYGYTHRWHDLGLERAQKVEEARRDGFPSPPPSRPLPLLPAHPGYGNQR---LLWLPEEENRV---QRPIGQAFTYYPPSEGKAEGAGGEAELVVVLRGTVFSEEWSSNFRLHEASQDVLRAYGMEGAIIPKGFFAMFQALVPQINAALAAHGRAFKGLTFTGHSLGGSLSLLLGTYYARQHPDLRLSIVTFGAPNVADAVFFERHYDTRINLRQLTYIGSGLLPPDERGASSPPSPHPAYSFGLGDIFAQMPPDCTAVSPCPLF--LFPV---GDSTLQELKGDMFKRIQLARAPGSV-VIHARDLAGRASVDSWLAYEDFAVQADTRLDAGLIATHVCAYACWVS 638
S + +P C + + L C +L L + PP L W R V P P LE + + + ++ E+P Y + +R I N Y A AR G S P+ L P + NQR L W V Q P +FT + E++VV+RGT++S EW NF+ A AY M G + GFFA+F+ L + +A +TFTGHSLGGS+ LL Y P ++ +V+FGAPNV DA F ++ R+ R L + G G S+ +GD +Q+P C AV+ CPL + V G + Q + + L GSV A+ GR +W D A +A H C+Y C+ +
Sbjct: 98 STTSASEFPACSIQAALNEDGLICLAGSLWLALTQTLPPQLG--------------WGSKIRPPVDPLRELPQPLEVLSMPLPALVPTEKVEAEKPTYYFLYRAIQNLY-------------AAVGANARSRGTDSA--QEPMLNLALPPAWTNQREYTLRWTGSLVAGVLQPQAPFAVSFTR-------------DKEMLVVVRGTIYSAEWQRNFQYQHADPTETAAYRMPGGVH-AGFFAVFKDLAEAL-VDDEIKRQAPSKVTFTGHSLGGSVGALLAFYTTHVLPRTQVELVSFGAPNVGDAT-FSSAFNARVRNRHLAFSGVG---------------SEGDSYFIGDWISQVP--CGAVTTCPLLTEMSSVDLNGSPSGQRQANESYSYTALG---GSVPFTPAQMQNGR----TWALRSDVA-----GFRYSPVAAHTCSYMCFTA 477
BLAST of EWM21025.1 vs. NCBI_GenBank
Match: gi|585109778|gb|EWM27512.1| (lipase class 3 [Nannochloropsis gaditana]) HSP 1 Score: 77.0258 bits (188), Expect = 3.848e-11 Identity = 75/286 (26.22%), Postives = 123/286 (43.01%), Query Frame = 0
Query: 390 LVVVLRGTVFSEEWSSNFRLHEASQDVLRAYGMEGAIIPKGFFAMFQALVPQINAALAAHGRAFKGLTFTGHSLGGSLSLLLGTYY--ARQHPDLRLSIVTFGAPNVADAVFFERHYDTRINLRQLTYIGSGLLPPDERGASSPPSPHPAYSFGLGDIFAQMPPDCTAVSPCPLFLFPVGDSTLQELKGDMFKRIQLARAPGSVVIHARDLAGRASVDSWLAYEDFA-VQADTRLDAGLIATHVCAYACWVSTGGEGAAGE-ETRCYFPEEGEGR---AEGEICDL 668
++VV+RGT+++EEW +F+ A + G + F ++ L ++ + AH + TGHSLG ++ ++G + QH R+ ++ FG PN D F + + T +N R L ++G G S P+P+ + GDI AQ C C + G K + R V + D+ + + D A V+ +IA+H+C+Y CW S A G+ ++RCYF E EGR + CD+
Sbjct: 232 MMVVIRGTIWTEEWCKDFQYRWADDEDGLFPGRTHEGMYSVFVDFYKGLEEEVESRQPAH------VLVTGHSLGAGIANMIGLRLENSLQHKP-RVDVIGFGGPNTGDTDFADIYRRT-VNSRHLIFLGHG----------SSPNPN---MYTAGDITAQY--TCEPYPGCDVL-----------ATGPFGKTYKYVRPHNQVPFYPEDMPNPKT------WNDIANVRRIIPSTKRVIASHICSYICWTSL----AVGDLDSRCYFASE-EGRPDLPQSYYCDV 472
BLAST of EWM21025.1 vs. NCBI_GenBank
Match: gi|926790277|ref|XP_013903612.1| (hypothetical protein MNEG_3369 [Monoraphidium neglectum] >gi|761974506|gb|KIZ04593.1| hypothetical protein MNEG_3369 [Monoraphidium neglectum]) HSP 1 Score: 67.0106 bits (162), Expect = 8.723e-8 Identity = 93/386 (24.09%), Postives = 150/386 (38.86%), Query Frame = 0
Query: 284 KALLDRERPVYRWCW---RQIVNFYGYTHRWHDLGLERAQKVEEARRDGFPSPPPSRPLPLLPAHPGYGNQRLLWLPEEENRVQRPI----GQAFTYYPPSEGKAEGAGGEAELVVVLRGTVFSEEWSSNFRLHEASQDVLRAYGMEGAI------------IPKGFFAMFQALVPQINA---ALAAHGRAFKG---LTFTGHSLGGSLSLLLG---TYY--ARQHPDLRLSIVTFGAPNVADAVFFERHYDTRINLRQLTYIGSGLLPPDERGASSPPSPHPAYSFGLGDIFAQMPPDCTAVSPCPLFLFPVGDSTLQELKGDMFKRIQLARAPGSVVIHARDL-AGRASVDSWLAYEDFAVQADTRLDAGLIATHVCAYACWVS 638
K L ++E Y W W R I ++ + +++ G V + + R PL P L+ E + V PI QA P + + +LV+ +RGT + EW + S R++ EG KGF F AL P + A AL +G G +TF GHSLGG+++ +L YY A + + +S+VTFGAP A+ + + +R++TY L + +SPP+ +F + P C+ P L G+ G ++ R + G+ V L +A+ + W A + F + + HVC+Y C +S
Sbjct: 524 KGLFNKEGATYNWLWHVNRNIKYYWACSKQFN--GSLTGYLVPKGWEPVGGTAASGRGAPLEPG---------LYNVLESDNVSYPIMAILKQAAEPSKPQKSR--------QLVIAVRGTNTTSEWKLDLAYDRVSWKG-RSFTGEGFAGNSFSGKSWTGETHKGFTFFFDALWPAVQAQLKALVVNGDTATGVNSITFAGHSLGGAVAPMLALASAYYLKANKKTSVTISVVTFGAPQYANLALM-KQLGKEVAVRRITYSYDLL---TKLPCASPPTDKKDPTFAM--------PACSG----PDMLVNTGNP-----DGTLYWR-DYSNITGTFVFTPEQLPVDQATQNLWEANKLFDLTNKLAFKFASVTNHVCSYVCLIS 867
BLAST of EWM21025.1 vs. NCBI_GenBank
Match: gi|553183716|ref|XP_005853950.1| (hypothetical protein NGA_0436400, partial [Nannochloropsis gaditana CCMP526] >gi|422295111|gb|EKU22410.1| hypothetical protein NGA_0436400, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 59.6918 bits (143), Expect = 3.556e-7 Identity = 35/94 (37.23%), Postives = 48/94 (51.06%), Query Frame = 0
Query: 577 DMFKRIQLARAPGSVVIHARDLAGRASVDSWLAYEDFAVQADTRLD--AGLIATHVCAYACWVSTGGEGAAGEETRCYFPEEGEGRAEGEICDL 668
D + Q A G+V +A DL + + WL E+F A D G +A H+C+YACW S E +TRCYFP +G A GE+C +
Sbjct: 23 DNLESFQFVMAAGNVPFYASDLR---NTEGWLKKENFFFGARKFRDIPEGTMACHICSYACWTS---EATGDSDTRCYFPGQGVQEA-GELCSV 109 The following BLAST results are available for this feature:
BLAST of EWM21025.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 8
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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