EWM29715.1, cds962 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29715.1 vs. NCBI_GenBank
Match: gi|585112293|gb|EWM29715.1| (alpha- -mannosyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 1237.63 bits (3201), Expect = 0.000e+0 Identity = 601/601 (100.00%), Postives = 601/601 (100.00%), Query Frame = 0
Query: 1 MYTTSLRFRKWRYHVLDSLQRTDLPVFVKGHVSAAARSSRTWFYYGSLLFATMYVVSMLQFYSPSVPPSMLEPAYRACRRGRQSGDRLPFLYHSSGRIRKASSVSSRVLYAERYVEDARQDPREARGRGTGQRDGSVLGGSVGSERLGDQTGTGEDARRQEEKESDSIFAPQLLQLAALATGVSTGSEAGSKLSSSQGAAATDGSRKEGHDNYYHFQGLFVPAVSCPSAHFRSGRGIVITASGRISGQAIGAFVTSFLLRRVLGCELPIEIYFVGEHEIFSTALRDKILELKDVRVSSLLDVLGSDPFYQSKLKHLHVPDRRLRSYAAKPYALYAAPFEEVLLFDAGVIPFANPENFFGLDSFRDHGFHIFRDYRELDRNAWGFVEHEYCTDMDELHGLLAGTEADSSCVLLHKGRAWDALLVTMAMNGPLQPFTYARLNGDKDTWALAAALTYQNFSMAQTTPGYFMREARPELTLLDSAYAGWAQPIRGQVQFRRDPEAVGGVVPLYVNNQLLNMTEYPGMRHRLAFGLWEDYGYPFCGWRAVNALLRPPPEVFNVMDAVGEALHTVGAPDECLCKWFRCRFPVAFGTDSPFLLRRLFS 601
MYTTSLRFRKWRYHVLDSLQRTDLPVFVKGHVSAAARSSRTWFYYGSLLFATMYVVSMLQFYSPSVPPSMLEPAYRACRRGRQSGDRLPFLYHSSGRIRKASSVSSRVLYAERYVEDARQDPREARGRGTGQRDGSVLGGSVGSERLGDQTGTGEDARRQEEKESDSIFAPQLLQLAALATGVSTGSEAGSKLSSSQGAAATDGSRKEGHDNYYHFQGLFVPAVSCPSAHFRSGRGIVITASGRISGQAIGAFVTSFLLRRVLGCELPIEIYFVGEHEIFSTALRDKILELKDVRVSSLLDVLGSDPFYQSKLKHLHVPDRRLRSYAAKPYALYAAPFEEVLLFDAGVIPFANPENFFGLDSFRDHGFHIFRDYRELDRNAWGFVEHEYCTDMDELHGLLAGTEADSSCVLLHKGRAWDALLVTMAMNGPLQPFTYARLNGDKDTWALAAALTYQNFSMAQTTPGYFMREARPELTLLDSAYAGWAQPIRGQVQFRRDPEAVGGVVPLYVNNQLLNMTEYPGMRHRLAFGLWEDYGYPFCGWRAVNALLRPPPEVFNVMDAVGEALHTVGAPDECLCKWFRCRFPVAFGTDSPFLLRRLFS
Sbjct: 1 MYTTSLRFRKWRYHVLDSLQRTDLPVFVKGHVSAAARSSRTWFYYGSLLFATMYVVSMLQFYSPSVPPSMLEPAYRACRRGRQSGDRLPFLYHSSGRIRKASSVSSRVLYAERYVEDARQDPREARGRGTGQRDGSVLGGSVGSERLGDQTGTGEDARRQEEKESDSIFAPQLLQLAALATGVSTGSEAGSKLSSSQGAAATDGSRKEGHDNYYHFQGLFVPAVSCPSAHFRSGRGIVITASGRISGQAIGAFVTSFLLRRVLGCELPIEIYFVGEHEIFSTALRDKILELKDVRVSSLLDVLGSDPFYQSKLKHLHVPDRRLRSYAAKPYALYAAPFEEVLLFDAGVIPFANPENFFGLDSFRDHGFHIFRDYRELDRNAWGFVEHEYCTDMDELHGLLAGTEADSSCVLLHKGRAWDALLVTMAMNGPLQPFTYARLNGDKDTWALAAALTYQNFSMAQTTPGYFMREARPELTLLDSAYAGWAQPIRGQVQFRRDPEAVGGVVPLYVNNQLLNMTEYPGMRHRLAFGLWEDYGYPFCGWRAVNALLRPPPEVFNVMDAVGEALHTVGAPDECLCKWFRCRFPVAFGTDSPFLLRRLFS 601
BLAST of EWM29715.1 vs. NCBI_GenBank
Match: gi|585111909|gb|EWM29381.1| (Alpha-mannosyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 214.157 bits (544), Expect = 7.871e-59 Identity = 153/415 (36.87%), Postives = 205/415 (49.40%), Query Frame = 0
Query: 220 FVPA--VSCPSAHFRSGRGIVITASGRISGQAIGAFVTSFLLRRVLGCELPIEIYFVGEHEIFSTALRDKILELKDVRVSSLLDVLGSDPFYQSKLKHLHVPDRR----------LRSYAAKPYALYAAPFEEVLLFDAGVIPFANPENFFGLDSFRDHGFHIFRDYRELDRNAWGFVEHEYCTDMDELHGLLAGTEADSSCVLLHKGRAWDALLVTMAMNGPLQPFTYARLNGDKDTWALAAALTYQNFSMAQTTPGYFMREARPEL-------------------TLLDSAYAGWAQPIRGQVQFRRDP--EAVGGVVPLYVNNQLLNMTEYPGMRHRLAFGLWEDYGYPF------------CGWRAVNALLRPPPEVFNVMDAVGEALHTVGAPDECLCK--WFRCRFPVA 587
F PA ++ P A F G+GIVI ASG I+ QA GA+VT+ +LR VL +LPIEI++ G E F + + L DVR LLD+ +S L +LH R LR YAAK YA+ A F+E LLFDAG IPF FFGL S+ HG +F DY +D W ++ C D+ ++ L G E DSSCV++ K R DAL V++A+NGP Q TYA L GDKDTWALA + S+ + PGY ++ ARP T S+ A+ + G VQF +D ++ G+VPL+ NNQLL++ Y HR G++ D C LL P + +AV L D C+C+ W C +A
Sbjct: 74 FTPATPMATPDALFH-GKGIVIAASGAIARQAAGAYVTALVLRTVLHEDLPIEIFYSGPEEAFQGPVLKALEALPDVR---LLDL-------ESALSNLHARGLRTLEPLPSLQALRGYAAKAYAMQACSFQEALLFDAGAIPFVPASRFFGLPSYHRHGLAVFSDYVSIDAAQWRYILQGMCLDVRQVARALNGRELDSSCVVMDKRRNADALAVSLALNGPCQALTYATLWGDKDTWALAMFYVGKTVSVRECEPGYLLK-ARPSGEGGGEGGGEGGAEEGARGNTDTLSSPLQVARKVNGHVQFLKDKSSQSPPGLVPLHHNNQLLDLRNY----HRHKNGIYMDVFSHLGDVLMPGTRRRDCRAFPARDLLPLSPVMHEAYEAVALGLEE-NKIDHCVCRDDWISCEADIA 471
BLAST of EWM29715.1 vs. NCBI_GenBank
Match: gi|657881751|ref|WP_029586183.1| (hypothetical protein [Bradyrhizobium sp. URHD0069]) HSP 1 Score: 85.8853 bits (211), Expect = 5.057e-14 Identity = 73/246 (29.67%), Postives = 110/246 (44.72%), Query Frame = 0
Query: 227 PSAHFRSGRGIVITASGRISGQAIGAFVTSFLLRRVLGCELPIEIYFVGEHEIFSTALRDKILELKDVRVSSLLDVLGSDPFYQSKLKHLHVPDRRLRSYAAKPYALYAAPFEEVLLFDAGVIPFANPENFFGLDSFRDHGFHIFRDYRELDRNAWGFVEHEYCTDMDELHGLLAGTE--------ADSSCVLLHKGRAWDALLVTMAMNGPLQPFTYARLNGDKDTWALAAALTYQNFSMAQTTP 464
PS HF SG GI+I A G AFV LLR GC+LPIE++ G E+ + R K+L L+D+ V D + ++ + +P R + K YAL FE VL+ DA +P +P F D +R G ++ D C D+ E + + + E +S +L+HK R W L + + +N + Y L GDKDT+ + LT +++ P
Sbjct: 24 PSDHF-SGTGILICAGG--PSFFTNAFVLVHLLRVTHGCKLPIEVWHFGRGEMSA---RMKLL-LRDLGV----DTVDAEAVLTA------LPARIQNGWQLKAYALMWCRFEHVLMLDADQVPLTDPAGLFEWDEYRQTGAVLWPD----------------CGDILETNPIWSACELKPRTCPAIESGQLLIHKARHWRGLQIALHLNEH-SAYYYQLLYGDKDTFLIGLLLTDSAYALVPHRP 235
BLAST of EWM29715.1 vs. NCBI_GenBank
Match: gi|1160742533|ref|WP_079601147.1| (hypothetical protein [Bradyrhizobium erythrophlei] >gi|1109600111|emb|SHG59996.1| Mannosyltransferase putative [Bradyrhizobium erythrophlei]) HSP 1 Score: 84.7297 bits (208), Expect = 1.143e-13 Identity = 71/238 (29.83%), Postives = 103/238 (43.28%), Query Frame = 0
Query: 227 PSAHFRSGRGIVITASGRISGQAIGAFVTSFLLRRVLGCELPIEIYFVGEHEIFSTALRDKILELKDVRVSSLLDVLGSDPFYQSKLKHLHVPDRRLRSYAAKPYALYAAPFEEVLLFDAGVIPFANPENFFGLDSFRDHGFHIFRDYRELDRNAWGFVEHEYCTDMDELHGLLAGTEADSSCVLLHKGRAWDALLVTMAMNGPLQPFTYARLNGDKDTWALAAALTYQNFSMAQTTP 464
PS HF SG GI+I A G A+V LLR GC LPIE++ G E+ R+ LL LG+D ++ +P R + K YAL FE VL+ DA +P +P F D +R G ++ D ++ +E D +L +S +L+HK R W L + + +N + Y L GDKDT+ L LT +++ P
Sbjct: 24 PSDHF-SGTGILICAGG--PSFFTNAYVLVHLLRVTHGCTLPIEVWHFGRGEM-------------SARMKLLLHDLGADTV-DAEAVLTSLPARVQNGWQLKAYALMWCRFEHVLMLDADQVPLGDPAELFKWDDYRRTGAVLWPDCGDI-------LETNPIWDACDLKSRTCPA-VESGQLLIHKARHWRGLQIALHLN-EHSAYYYQLLYGDKDTFLLGLLLTESAYALVPHRP 235
BLAST of EWM29715.1 vs. NCBI_GenBank
Match: gi|1154910078|ref|WP_078815927.1| (hypothetical protein [Prosthecobacter debontii] >gi|1152225455|emb|SKB07876.1| Glycosyltransferase involved in cell wall bisynthesis [Prosthecobacter debontii]) HSP 1 Score: 84.7297 bits (208), Expect = 2.331e-13 Identity = 79/249 (31.73%), Postives = 115/249 (46.18%), Query Frame = 0
Query: 215 HFQGLFVPAVSCPSAHFRSG--RGIVITASGRISGQAIGAFVTSFLLRRVLGCELPIEIYFVGEHEIFSTALRDKILELKDVRVSSLLDVLGSDPFYQSKLKHLHVPDRRLRSYAAKPYALYAAPFEEVLLFDAGVIPFANPENFFGLDSFRDHGFHIFRDY--RELDRNAWGFVEHEYCTDMDELHGLLAGTEADSSCVLLHKGRAWDALLVTMAMNGPLQPFTYARLNGDKDTWALAAALTYQNFSM 459
HFQ L + A + G RGIVI A G A+V +LR LGCELPIE++ +G E+ S +R +LE VR ++ + KH P R L + K Y++ + FEEVLL DA +P NP F + +++ G + D DR+ W Y + E +S VL+HK R W+AL++ M N F Y + GDKDT+ A ++++M
Sbjct: 248 HFQRLAMKAAYSRKFPKKIGHQRGIVICAGG--PRYFACAWVCIRMLRH-LGCELPIEVWHLGPAEM-SPHMRS-LLEPWGVRCVDAFEI---------RKKH---PVRLLAGWELKCYSILYSDFEEVLLLDADNVPVHNPTFLFDTEEYQEQGAVFWPDLGCTAEDRDIWNLTGVPYRKE----------REFESGQVLVHKRRCWNALVLAMHYN-EHSDFYYQHVYGDKDTFRFAFRKLGKDYAM 468
BLAST of EWM29715.1 vs. NCBI_GenBank
Match: gi|1028568140|gb|OAJ36444.1| (hypothetical protein BDEG_20617 [Batrachochytrium dendrobatidis JEL423]) HSP 1 Score: 82.0333 bits (201), Expect = 6.371e-13 Identity = 64/232 (27.59%), Postives = 109/232 (46.98%), Query Frame = 0
Query: 233 SGRGIVITASGRISGQAIGAFVTSFLLRRVLGCELPIEIYFVGEHEIFSTALRDKILELKDVRVSSLLDVLGSDPFYQSKLKHLHVPDRRLRSYAAKPYALYAAPFEEVLLFDAGVIPFANPENFFGLDSFRDHGFHIFRDYRELDRNAWGF----------VEHEYCTDMDELHGLL----AGTEADSSCVLLHKGRAWDALLVTMAMN-GPLQPFTYARLNGDKDTWALA 449
+GRGI IT + + + V + L +G LPIEI++ G+ ++ + L + +V+++ + D+LG D + R Y KP+A+ A+ F EV++ DA V+ F PE F +++ G IFRD R L+ W + H Y +++ + E D+ V+ K R A+L+T +N P + + Y R GDK+T+ L+
Sbjct: 133 TGRGIAITTGSKYA--LVAKLVVTML--HEIGSTLPIEIFYCGKDDLGTNEL-EMFSAFPNVKLADMQDILGID--------------QCSRGYENKPFAVLASSFREVIMIDADVLFFQPPEVIFESAGYKEMGAVIFRD-RTLEYGTWNHGPSLKRLVEEIAHPYLSNLIYPEARVMRKKTAQEIDAGVVVWDKMRTMPAILLTCLLNSSPYKHWIYDRTLGDKETFWLS 344
BLAST of EWM29715.1 vs. NCBI_GenBank
Match: gi|494655008|ref|WP_007412952.1| (hypothetical protein [Pedosphaera parvula] >gi|223896698|gb|EEF63139.1| hypothetical protein Cflav_PD5774 [bacterium Ellin514]) HSP 1 Score: 82.8037 bits (203), Expect = 9.025e-13 Identity = 84/273 (30.77%), Postives = 120/273 (43.96%), Query Frame = 0
Query: 193 LSSSQGAAATDGSRKEGHDNY------YHFQGL----FVPAVSCPSAHFRSGRGIVITASGRISGQAIGAFVTSFLLRRVLGCELPIEIYFVGEHEIFSTALRDKILELKDVRVSSLLDVLGSDPFYQSKLKHLHVPDRRLRSYAAKPYALYAAPFEEVLLFDAGVIPFANPENFFGLDSFRDHGFHIFRDY----RELDRNAWGFVEHEYCTDMDELHGLLAGTEA--DSSCVLLHKGRAWDALLVTMAMNGPLQPFTYARLNGDKDTWALA 449
LSS Q AA G K D + H G+ F+ + F SGRGIVI A G A+V +LR + GC+LPI+++ +GE E+ D +++LL LG K++ P R L + K YA+ +PFEEVL DA +P NPE F +R+ G + DY E + W + C GL E ++ +++ K R W AL + M N F Y + GDK+T+ LA
Sbjct: 317 LSSKQRIAARRGVIKTHRDAFDQESLNLHNAGMACDRFLNQIVSYPDRF-SGRGIVICAGG--VRYFTNAWVCIHMLR-LRGCKLPIQVWHLGEKEM-------------DPEMANLLLPLGVKCIDAYKMRE-RFPARILNGWELKAYAMLHSPFEEVLFLDADNVPIVNPEFLFDTPQYRETGAIFWPDYDQGKNEKKQTIW-----KSC-------GLRQPQEPEFETGQMVVDKKRCWVALSLCMWFNEN-SDFYYNYIYGDKETFHLA 558
BLAST of EWM29715.1 vs. NCBI_GenBank
Match: gi|748490418|ref|XP_011108558.1| (hypothetical protein H072_2571 [Dactylellina haptotyla CBS 200.50] >gi|526203143|gb|EPS43438.1| hypothetical protein H072_2571 [Dactylellina haptotyla CBS 200.50]) HSP 1 Score: 80.1073 bits (196), Expect = 4.362e-12 Identity = 72/253 (28.46%), Postives = 117/253 (46.25%), Query Frame = 0
Query: 220 FVPAVSCPSAHFRSGRGIVITASGRISGQAIGAFVTSFLLRRVLGCELPIEIYFVGEHEIFSTALRDKILELKDVRVSSLLDVLGSDPFYQSKLKHLHVPDRRLRSYAAKPYALYAAPFEEVLLFDAGVIPFANPENFFGLDSFRDHGFHIFRDYRELDRNAWGFVEHEYCTDMDE------LHGLLAGTEADSSCVLLHKGRAWDALLVTMAMNGPLQPFT--------YARLNGDKDT----WALAAALTY 454
F +S S ++ GRGIV++A + + +TS R LGC+LPIEI ++GE ++ S R + LE D V+ + + SD + +L +AAKP+A+ + F EV+ DA + F NPE F +S++ G FRD + N +++ + + ++G +S V++ K R + A+L+ MNGP + Y + GDK+T W L A Y
Sbjct: 287 FADHMSLHSQMYKGGRGIVLSAGDKQAP----FLLTSIPSFRKLGCKLPIEIMYLGESDL-SEDYRAE-LEQFDGVVTRDISAMVSDEGW------------KLAGWAAKPFAMLLSSFREVIFIDADSLFFKNPEVLFEDESYKKTGALFFRDRIIMPENKKRWLQQIIPKPISKKVRQSRFWTGVSGHMQESGVVVVDKWRHFVAMLLVTRMNGPDRDGNESKGIVGVYDMVYGDKETFWLGWELVADTDY 521
BLAST of EWM29715.1 vs. NCBI_GenBank
Match: gi|1174231218|ref|WP_081452392.1| (hypothetical protein [Verrucomicrobium spinosum]) HSP 1 Score: 78.5666 bits (192), Expect = 1.076e-11 Identity = 72/237 (30.38%), Postives = 109/237 (45.99%), Query Frame = 0
Query: 226 CPSAHFRSGRGIVITASGRISGQAIGAFVTSFLLRRVLGCELPIEIYFVGEHEIFSTALRDKILELKDVRVSSLLDVLGSDPFYQSKLKHLHVPDRRLRSYAAKPYALYAAPFEEVLLFDAGVIPFANPENFFGLDSFRDHGFHIFRDYRE--LDRNAWGFVEHEYCTDMDELHGLLAGTEADSSCVLLHKGRAWDALLVTMAMNGPLQPFTYARLNGDKDTWALAAALTYQNFSMA 460
CPS HF SG+GIVI A G + + R GC LP+E++ +GE E+ K+L K ++L+D + + KH P + L+ + K +A+ F+EVLL DA +P +P + F ++ D G + D RNAW D E +S VL++KGR W AL + M +N + Y GDK+++ A L + F+MA
Sbjct: 25 CPS-HF-SGQGIVIAAGGDTLLPCLWVLLHRL---RATGCSLPVEVWHLGEDEMPGDI--RKLLSEK-FPFTTLIDA------FAVREKH---PVKILKGWELKVFAMLHCSFKEVLLLDADNVPMVDPTSVFQNPAYLDRGALFWPDQNRHARGRNAWRAFGIPPEDDW----------EVESGQVLVNKGRHWRALNLAMHLN-EHSDYYYRLFYGDKESFYFAWKLLNEPFAMA 233
BLAST of EWM29715.1 vs. NCBI_GenBank
Match: gi|662530840|gb|KEQ88213.1| (hypothetical protein M438DRAFT_341854 [Aureobasidium pullulans EXF-150]) HSP 1 Score: 78.9518 bits (193), Expect = 1.351e-11 Identity = 71/245 (28.98%), Postives = 114/245 (46.53%), Query Frame = 0
Query: 229 AHFRSG-RGIVITASGRISGQAIGAFVTSFLLRRVLGCELPIEIYFVGEHEIFSTALRDKILELKDVRVSSLLDVLGSDPFYQSKLKHLHVPDRRLRSYAAKPYALYAAPFEEVLLFDAGVIPFANPENFFGLDSFRDHGFHIFRD--YRELDRNAW-GFVEHEYCTDMDELHGLLAG---TEADSSCVLLHKGRAWDALLVTMAMNGPLQPFT--------YARLNGDKDT----WALAAALTY 454
AHFR+G RGIV++ + + QA F+TS + R LGC LP+EI ++GE+++ + R K+ + V L ++ D + L+ +A+K +AL + F EV+ DA + F NPE+ F + + G FRD Y R W + + + + G + +S C+++ K R + A+L MNGP + Y+ GDK+T W LA Y
Sbjct: 317 AHFRNGGRGIVLSGNDK---QA-PFFLTSIMSFRKLGCNLPVEIMYLGENDL-NDDWRMKLESIPGVVTRDLSQMVSDDGW-------------ELKGWASKAFALLMSSFREVIYLDADALFFVNPEDLFQDPGYVETGALFFRDRVYAPSSRKQWLKDMLPKPISKKAQTSRYWTGESREQQESGCLVVDKWRHFVAMLTVTRMNGPDRDDNSKTGAKGVYSLFYGDKETFWLGWELAGDTDY 543 The following BLAST results are available for this feature:
BLAST of EWM29715.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|