EWM21061.1, cds9612 (CDS) Nannochloropsis gaditana

Overview
NameEWM21061.1
Unique Namecds9612
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037255.1:43085..43474 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21061.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100654g2.6019.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037255.1supercontigKK037255.1:43085..43474 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Homology
[Close]
BLAST of EWM21061.1 vs. NCBI_GenBank
Match: gi|585101086|gb|EWM21061.1| (hypothetical protein Naga_100654g2 [Nannochloropsis gaditana])

HSP 1 Score: 265.774 bits (678), Expect = 4.107e-90
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0 
Query:    1 MLASAADYSQHHAEDRLTKHLLELDRQQAAREQAPGYSVYLTHLSPFSFSEKNIVHVGLPQKWKGGGEGRWGRLVTFPHDNLPRLGQEAAERKEERIKELETKKEGKQQQWGCKGGGWSWRELGIEPCE 129
            MLASAADYSQHHAEDRLTKHLLELDRQQAAREQAPGYSVYLTHLSPFSFSEKNIVHVGLPQKWKGGGEGRWGRLVTFPHDNLPRLGQEAAERKEERIKELETKKEGKQQQWGCKGGGWSWRELGIEPCE
Sbjct:    1 MLASAADYSQHHAEDRLTKHLLELDRQQAAREQAPGYSVYLTHLSPFSFSEKNIVHVGLPQKWKGGGEGRWGRLVTFPHDNLPRLGQEAAERKEERIKELETKKEGKQQQWGCKGGGWSWRELGIEPCE 129
[Close]
BLAST of EWM21061.1 vs. NCBI_GenBank
Match: gi|585109043|gb|EWM26913.1| (glutathione s-transferase [Nannochloropsis gaditana])

HSP 1 Score: 91.2781 bits (225), Expect = 5.380e-19
Identity = 44/58 (75.86%), Postives = 52/58 (89.66%), Query Frame = 0 
Query:    1 MLASAADY-SQHHAEDRLTKHLLELDRQQAAREQAPGYSVYLTHLSPFSFSEKNIVHV 57
            +LASAAD+ S +HAEDR+TKHLLE+DRQQAARE+APGY VYLTHL+P + SEKNIV V
Sbjct:  354 ILASAADHQSDYHAEDRVTKHLLEVDRQQAAREEAPGYCVYLTHLTPLTCSEKNIVLV 411
The following BLAST results are available for this feature:
BLAST of EWM21061.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585101086|gb|EWM21061.1|4.107e-90100.00hypothetical protein Naga_100654g2 [Nannochloropsi... [more]
gi|585109043|gb|EWM26913.1|5.380e-1975.86glutathione s-transferase [Nannochloropsis gaditan... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9643rna9643Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications