EWM30595.1, cds96 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30595.1 vs. NCBI_GenBank
Match: gi|585113262|gb|EWM30595.1| (peroxisomal membrane protein 2 [Nannochloropsis gaditana]) HSP 1 Score: 489.574 bits (1259), Expect = 5.463e-175 Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0 Query: 1 MASELNEEDIPASAGPTSKPAEDEALSMATTTKSDTNTSAALICTFPASMKAELKRLLRAYHHCLVTRPVLTKALTSAVISALGDILASSGKGGRGRSGRRTLGFFLFGGLVTGPLCHYWYGLLEKKVRGLQGGKNVAMKVLLDKLLFTPPFLALTLFLLRLLESGRPGAAWRGMKQVYFPTLKTNLQVWTVAQAINFSYVSPAYRVLFGNLVALWWSFYLSRLGGGAGGRASSVVLMRKRY 242 MASELNEEDIPASAGPTSKPAEDEALSMATTTKSDTNTSAALICTFPASMKAELKRLLRAYHHCLVTRPVLTKALTSAVISALGDILASSGKGGRGRSGRRTLGFFLFGGLVTGPLCHYWYGLLEKKVRGLQGGKNVAMKVLLDKLLFTPPFLALTLFLLRLLESGRPGAAWRGMKQVYFPTLKTNLQVWTVAQAINFSYVSPAYRVLFGNLVALWWSFYLSRLGGGAGGRASSVVLMRKRY Sbjct: 1 MASELNEEDIPASAGPTSKPAEDEALSMATTTKSDTNTSAALICTFPASMKAELKRLLRAYHHCLVTRPVLTKALTSAVISALGDILASSGKGGRGRSGRRTLGFFLFGGLVTGPLCHYWYGLLEKKVRGLQGGKNVAMKVLLDKLLFTPPFLALTLFLLRLLESGRPGAAWRGMKQVYFPTLKTNLQVWTVAQAINFSYVSPAYRVLFGNLVALWWSFYLSRLGGGAGGRASSVVLMRKRY 242
BLAST of EWM30595.1 vs. NCBI_GenBank
Match: gi|553181362|ref|XP_005853552.1| (integral membrane mpv17 pmp22, partial [Nannochloropsis gaditana CCMP526] >gi|422295512|gb|EKU22811.1| integral membrane mpv17 pmp22, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 475.322 bits (1222), Expect = 2.359e-169 Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0 Query: 1 MASELNEEDIPASAGPTSKPAEDEALSMATTTKSDTNTSAALICTFPASMKAELKRLLRAYHHCLVTRPVLTKALTSAVISALGDILASSGKGGRGRSGRRTLGFFLFGGLVTGPLCHYWYGLLEKKVRGLQGGKNVAMKVLLDKLLFTPPFLALTLFLLRLLESGRPGAAWRGMKQVYFPTLKTNLQVWTVAQAINFSYVSPAYRVLFGNLVALWWSFYLSRLGGGAGGRASSV 235 MASELNEEDIPASAGPTSKPAEDEALSMATTTKSDTNTSAALICTFPASMKAELKRLLRAYHHCLVTRPVLTKALTSAVISALGDILASSGKGGRGRSGRRTLGFFLFGGLVTGPLCHYWYGLLEKKVRGLQGGKNVAMKVLLDKLLFTPPFLALTLFLLRLLESGRPGAAWRGMKQVYFPTLKTNLQVWTVAQAINFSYVSPAYRVLFGNLVALWWSFYLSRLGGGAGGRASSV Sbjct: 1 MASELNEEDIPASAGPTSKPAEDEALSMATTTKSDTNTSAALICTFPASMKAELKRLLRAYHHCLVTRPVLTKALTSAVISALGDILASSGKGGRGRSGRRTLGFFLFGGLVTGPLCHYWYGLLEKKVRGLQGGKNVAMKVLLDKLLFTPPFLALTLFLLRLLESGRPGAAWRGMKQVYFPTLKTNLQVWTVAQAINFSYVSPAYRVLFGNLVALWWSFYLSRLGGGAGGRASSV 235
BLAST of EWM30595.1 vs. NCBI_GenBank
Match: gi|695382429|ref|XP_009517398.1| (hypothetical protein PHYSODRAFT_323562 [Phytophthora sojae] >gi|348690309|gb|EGZ30123.1| hypothetical protein PHYSODRAFT_323562 [Phytophthora sojae]) HSP 1 Score: 139.813 bits (351), Expect = 5.520e-38 Identity = 78/168 (46.43%), Postives = 105/168 (62.50%), Query Frame = 0 Query: 57 LLRAYHHCLVTRPVLTKALTSAVISALGDILAS--SGKGGRGRSGRRTLGFFLFGGLVTGPLCHYWYGLLEKKVRGLQGGKNVAMKVLLDKLLFTPPFLALTLFLLRLLESGRPGAAWRGMKQVYFPTLKTNLQVWTVAQAINFSYVSPAYRVLFGNLVALWWSFYLS 222 L + Y L T P+ TKA+TSA ++ LG++L K RG S R+ L FF FGG VTGP+ HYWYG LE + R + K+LLD+LLFTPP +A T+F L ++ P A+ + +VY+ L N +VWT+ Q ++F YV P RVL+GN VALWW+ YLS Sbjct: 3 LQKRYQLALQTNPLRTKAVTSAGVAMLGEVLGHVLKHKTLRGLSPRQMLAFFAFGGAVTGPVLHYWYGYLETQ-RVTKEKLTPNKKLLLDRLLFTPPMVAFTIFSLGVMRGSSPKASRENLSRVYWGALLMNWKVWTLTQWLSFHYVPPLLRVLWGNCVALWWNSYLS 169
BLAST of EWM30595.1 vs. NCBI_GenBank
Match: gi|570968075|gb|ETP31194.1| (hypothetical protein F442_19910 [Phytophthora parasitica P10297]) HSP 1 Score: 143.665 bits (361), Expect = 1.923e-37 Identity = 75/163 (46.01%), Postives = 103/163 (63.19%), Query Frame = 0 Query: 62 HHCLVTRPVLTKALTSAVISALGDILAS--SGKGGRGRSGRRTLGFFLFGGLVTGPLCHYWYGLLEKKVRGLQGGKNVAMKVLLDKLLFTPPFLALTLFLLRLLESGRPGAAWRGMKQVYFPTLKTNLQVWTVAQAINFSYVSPAYRVLFGNLVALWWSFYLS 222 H L + TKALTSA ++ LG++L K RG S R+ L FF FGG+VTGP+ H+WYG LE + R + K+LLD+LLFTPP +A T+F L ++ P A+ + +VY+ L N +VWT+ Q ++F YV P +RVL+GN VALWW+ YLS Sbjct: 192 HRVLCNVAIRTKALTSAGVAMLGEVLGHVLKHKTLRGLSPRQMLAFFAFGGVVTGPVLHFWYGYLETQ-RVAKKKLTPNRKLLLDRLLFTPPMVAFTIFSLGIMRGSSPKASRENLSRVYWNALLMNWKVWTLTQWLSFHYVPPQFRVLWGNCVALWWNSYLS 353
BLAST of EWM30595.1 vs. NCBI_GenBank
Match: gi|568005919|gb|ETL80196.1| (hypothetical protein L917_19279 [Phytophthora parasitica]) HSP 1 Score: 143.665 bits (361), Expect = 2.093e-37 Identity = 75/163 (46.01%), Postives = 103/163 (63.19%), Query Frame = 0 Query: 62 HHCLVTRPVLTKALTSAVISALGDILAS--SGKGGRGRSGRRTLGFFLFGGLVTGPLCHYWYGLLEKKVRGLQGGKNVAMKVLLDKLLFTPPFLALTLFLLRLLESGRPGAAWRGMKQVYFPTLKTNLQVWTVAQAINFSYVSPAYRVLFGNLVALWWSFYLS 222 H L + TKALTSA ++ LG++L K RG S R+ L FF FGG+VTGP+ H+WYG LE + R + K+LLD+LLFTPP +A T+F L ++ P A+ + +VY+ L N +VWT+ Q ++F YV P +RVL+GN VALWW+ YLS Sbjct: 192 HRVLCNVAIRTKALTSAGVAMLGEVLGHVLKHKTLRGLSPRQMLAFFAFGGVVTGPVLHFWYGYLETQ-RVAKKKLTPNRKLLLDRLLFTPPMVAFTIFSLGIMRGSSPKASRENLSRVYWNALLMNWKVWTLTQWLSFHYVPPQFRVLWGNCVALWWNSYLS 353
BLAST of EWM30595.1 vs. NCBI_GenBank
Match: gi|567976430|gb|ETL26953.1| (hypothetical protein L916_19436 [Phytophthora parasitica]) HSP 1 Score: 143.665 bits (361), Expect = 2.553e-37 Identity = 76/166 (45.78%), Postives = 105/166 (63.25%), Query Frame = 0 Query: 59 RAYHHCLVTRPVLTKALTSAVISALGDILAS--SGKGGRGRSGRRTLGFFLFGGLVTGPLCHYWYGLLEKKVRGLQGGKNVAMKVLLDKLLFTPPFLALTLFLLRLLESGRPGAAWRGMKQVYFPTLKTNLQVWTVAQAINFSYVSPAYRVLFGNLVALWWSFYLS 222 + Y L T P+ TKALTSA ++ LG++L K RG S R+ L FF FGG+VTGP+ H+WYG LE + R + K+LLD+LLFTPP +A T+F L ++ P A+ + +VY+ L N +VWT+ Q ++F V P +RVL+GN VALWW+ YLS Sbjct: 207 QKYQLALQTNPLRTKALTSAGVAMLGEVLGHVLKHKTLRGLSPRQMLAFFAFGGVVTGPVLHFWYGYLETQ-RVAKKKLTPNRKLLLDRLLFTPPMVAFTIFSLGIMRGSSPKASRENLSRVYWNALLMNWKVWTLTQWLSFHCVPPQFRVLWGNCVALWWNSYLS 371
BLAST of EWM30595.1 vs. NCBI_GenBank
Match: gi|675210563|ref|XP_008914166.1| (hypothetical protein PPTG_24249 [Phytophthora parasitica INRA-310] >gi|568085591|gb|ETN00495.1| hypothetical protein PPTG_24249 [Phytophthora parasitica INRA-310]) HSP 1 Score: 140.198 bits (352), Expect = 4.254e-36 Identity = 74/163 (45.40%), Postives = 102/163 (62.58%), Query Frame = 0 Query: 62 HHCLVTRPVLTKALTSAVISALGDILAS--SGKGGRGRSGRRTLGFFLFGGLVTGPLCHYWYGLLEKKVRGLQGGKNVAMKVLLDKLLFTPPFLALTLFLLRLLESGRPGAAWRGMKQVYFPTLKTNLQVWTVAQAINFSYVSPAYRVLFGNLVALWWSFYLS 222 H L + TKALTSA ++ LG++L K RG S R+ L FF FGG+VTGP+ H+WYG LE + R + K+LLD+LLFTPP +A T+F L ++ P A+ + +VY+ L N +VWT+ Q ++F V P +RVL+GN VALWW+ YLS Sbjct: 192 HRVLCNVAIRTKALTSAGVAMLGEVLGHVLKHKTLRGLSPRQMLAFFAFGGVVTGPVLHFWYGYLETQ-RVAKKKLTPNRKLLLDRLLFTPPMVAFTIFSLGIMRGSSPKASRENLSRVYWNALLMNWKVWTLTQWLSFHCVPPQFRVLWGNCVALWWNSYLS 353
BLAST of EWM30595.1 vs. NCBI_GenBank
Match: gi|568035824|gb|ETM33451.1| (hypothetical protein L914_19315 [Phytophthora parasitica]) HSP 1 Score: 139.813 bits (351), Expect = 4.678e-36 Identity = 74/163 (45.40%), Postives = 102/163 (62.58%), Query Frame = 0 Query: 62 HHCLVTRPVLTKALTSAVISALGDILAS--SGKGGRGRSGRRTLGFFLFGGLVTGPLCHYWYGLLEKKVRGLQGGKNVAMKVLLDKLLFTPPFLALTLFLLRLLESGRPGAAWRGMKQVYFPTLKTNLQVWTVAQAINFSYVSPAYRVLFGNLVALWWSFYLS 222 H L + TKALTSA ++ LG++L K RG S R+ L FF FGG+VTGP+ H+WYG LE + R + K+LLD+LLFTPP +A T+F L ++ P A+ + +VY+ L N +VWT+ Q ++F V P +RVL+GN VALWW+ YLS Sbjct: 192 HRVLCNVAIRTKALTSAGVAMLGEVLGHVLKHKTLRGLSPRQMLAFFAFGGVVTGPVLHFWYGYLETQ-RVAKKKLTPNRKLLLDRLLFTPPMVAFTIFSLGIMRGSSPKASRENLSRVYWNALLMNWKVWTLTQWLSFHCVPPQFRVLWGNCVALWWNSYLS 353
BLAST of EWM30595.1 vs. NCBI_GenBank
Match: gi|570937760|gb|ETP03017.1| (hypothetical protein F441_19963 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 137.502 bits (345), Expect = 2.398e-35 Identity = 72/155 (46.45%), Postives = 100/155 (64.52%), Query Frame = 0 Query: 70 VLTKALTSAVISALGDILAS--SGKGGRGRSGRRTLGFFLFGGLVTGPLCHYWYGLLEKKVRGLQGGKNVAMKVLLDKLLFTPPFLALTLFLLRLLESGRPGAAWRGMKQVYFPTLKTNLQVWTVAQAINFSYVSPAYRVLFGNLVALWWSFYLS 222 + TKALTSA ++ LG++L K RG S R+ L FF FGG+VTGP+ H+WYG LE + R + K+LLD+LLFTPP +A T+F L ++ P A+ + +VY+ L N +VWT+ Q ++F V P +RVL+GN VALWW+ YLS Sbjct: 176 IETKALTSAGVAMLGEVLGHVLKHKTLRGLSPRQMLAFFAFGGVVTGPVLHFWYGYLETQ-RVAKKKLTPNRKLLLDRLLFTPPMVAFTIFSLGIMRGSSPKASRENLSRVYWNALLMNWKVWTLTQWLSFHCVPPQFRVLWGNCVALWWNSYLS 329
BLAST of EWM30595.1 vs. NCBI_GenBank
Match: gi|566010313|gb|ETI33224.1| (hypothetical protein F443_20086 [Phytophthora parasitica P1569]) HSP 1 Score: 137.502 bits (345), Expect = 2.723e-35 Identity = 72/155 (46.45%), Postives = 100/155 (64.52%), Query Frame = 0 Query: 70 VLTKALTSAVISALGDILAS--SGKGGRGRSGRRTLGFFLFGGLVTGPLCHYWYGLLEKKVRGLQGGKNVAMKVLLDKLLFTPPFLALTLFLLRLLESGRPGAAWRGMKQVYFPTLKTNLQVWTVAQAINFSYVSPAYRVLFGNLVALWWSFYLS 222 + TKALTSA ++ LG++L K RG S R+ L FF FGG+VTGP+ H+WYG LE + R + K+LLD+LLFTPP +A T+F L ++ P A+ + +VY+ L N +VWT+ Q ++F V P +RVL+GN VALWW+ YLS Sbjct: 176 IETKALTSAGVAMLGEVLGHVLKHKTLRGLSPRQMLAFFAFGGVVTGPVLHFWYGYLETQ-RVAKKKLTPNRKLLLDRLLFTPPMVAFTIFSLGIMRGSSPKASRENLSRVYWNALLMNWKVWTLTQWLSFHCVPPQFRVLWGNCVALWWNSYLS 329 The following BLAST results are available for this feature:
BLAST of EWM30595.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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