EWM21075.1, cds9598 (CDS) Nannochloropsis gaditana

Overview
NameEWM21075.1
Unique Namecds9598
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037255.1:5615..5963 +
Alignment locationKK037255.1:6076..6335 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21075.1
Productalpha- -glucosyltransferase
Orig transcript idgnl|cribi|Naga_101296g1.7429.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037255.1supercontigKK037255.1:5615..5963 +
KK037255.1supercontigKK037255.1:6076..6335 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0016758transferase activity, transferring hexosyl groups
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006464cellular protein modification process
GO:0006629lipid metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005783endoplasmic reticulum
GO:0016020membrane
GO:0005789endoplasmic reticulum membrane
Vocabulary: INTERPRO
TermDefinition
IPR004856Glyco_trans_ALG6/ALG8
Homology
BLAST of EWM21075.1 vs. NCBI_GenBank
Match: gi|585101120|gb|EWM21075.1| (alpha- -glucosyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 394.815 bits (1013), Expect = 8.892e-139
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0
Query:    1 MVATRASNRRSVTNNDHAAVADTPAGPEVLQSRFPLKNQPQSTQKRRKAPPRKDAAVQAEKNPSLLEPAPPPASSPFPSPSSSSSSSSSFSFNITSLTIILFALVVRHAVSLHSHSGMHTPPKYGDYEAQRHWMEITLHVPLKDWYSLPPSLPPLPPSLPPSLPPSPPLFPHRLPFSLSPIIIPPIHVYFLKKTMTQPLIGS 202
            MVATRASNRRSVTNNDHAAVADTPAGPEVLQSRFPLKNQPQSTQKRRKAPPRKDAAVQAEKNPSLLEPAPPPASSPFPSPSSSSSSSSSFSFNITSLTIILFALVVRHAVSLHSHSGMHTPPKYGDYEAQRHWMEITLHVPLKDWYSLPPSLPPLPPSLPPSLPPSPPLFPHRLPFSLSPIIIPPIHVYFLKKTMTQPLIGS
Sbjct:    1 MVATRASNRRSVTNNDHAAVADTPAGPEVLQSRFPLKNQPQSTQKRRKAPPRKDAAVQAEKNPSLLEPAPPPASSPFPSPSSSSSSSSSFSFNITSLTIILFALVVRHAVSLHSHSGMHTPPKYGDYEAQRHWMEITLHVPLKDWYSLPPSLPPLPPSLPPSLPPSPPLFPHRLPFSLSPIIIPPIHVYFLKKTMTQPLIGS 202          
BLAST of EWM21075.1 vs. NCBI_GenBank
Match: gi|1026018471|ref|XP_016541102.1| (PREDICTED: probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase [Capsicum annuum])

HSP 1 Score: 86.2705 bits (212), Expect = 2.114e-17
Identity = 42/87 (48.28%), Postives = 57/87 (65.52%), Query Frame = 0
Query:   60 EKNPSLLEPAPPPASSPFPSPSSSSSSSSSFSFNITSLTIILFALVVRHAVSLHSHSGMHTPPKYGDYEAQRHWMEITLHVPLKDWY 146
            EK     +P    + S   S  +   +++SF      + I LFA++VR AVS+H +SG  TPPKYGDYEAQRHWMEITL++P+K+WY
Sbjct:    2 EKKKKATKPTRDDSESNIWSFVTQRGTTASF------ICITLFAILVRIAVSIHPYSGAGTPPKYGDYEAQRHWMEITLNLPVKEWY 82          
BLAST of EWM21075.1 vs. NCBI_GenBank
Match: gi|1109215911|ref|XP_019182415.1| (PREDICTED: probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase [Ipomoea nil])

HSP 1 Score: 87.4261 bits (215), Expect = 1.163e-16
Identity = 37/50 (74.00%), Postives = 45/50 (90.00%), Query Frame = 0
Query:   97 LTIILFALVVRHAVSLHSHSGMHTPPKYGDYEAQRHWMEITLHVPLKDWY 146
            L I LFAL+VR AVSLHS+SG  TPP+YGDYEAQRHWMEIT+++P+K+WY
Sbjct:   30 LCISLFALLVRIAVSLHSYSGAGTPPRYGDYEAQRHWMEITINLPVKEWY 79          
BLAST of EWM21075.1 vs. NCBI_GenBank
Match: gi|1026028924|ref|XP_016560722.1| (PREDICTED: probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X2 [Capsicum annuum])

HSP 1 Score: 87.0409 bits (214), Expect = 1.518e-16
Identity = 42/87 (48.28%), Postives = 57/87 (65.52%), Query Frame = 0
Query:   60 EKNPSLLEPAPPPASSPFPSPSSSSSSSSSFSFNITSLTIILFALVVRHAVSLHSHSGMHTPPKYGDYEAQRHWMEITLHVPLKDWY 146
            EK     +P    + S   S  +   +++SF      + I LFA++VR AVS+H +SG  TPPKYGDYEAQRHWMEITL++P+K+WY
Sbjct:    2 EKKKKATKPTRDDSESNIWSFVTQRGTTASF------ICITLFAILVRIAVSIHPYSGAGTPPKYGDYEAQRHWMEITLNLPVKEWY 82          
BLAST of EWM21075.1 vs. NCBI_GenBank
Match: gi|1026028922|ref|XP_016560721.1| (PREDICTED: probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X1 [Capsicum annuum])

HSP 1 Score: 86.6557 bits (213), Expect = 2.188e-16
Identity = 42/87 (48.28%), Postives = 57/87 (65.52%), Query Frame = 0
Query:   60 EKNPSLLEPAPPPASSPFPSPSSSSSSSSSFSFNITSLTIILFALVVRHAVSLHSHSGMHTPPKYGDYEAQRHWMEITLHVPLKDWY 146
            EK     +P    + S   S  +   +++SF      + I LFA++VR AVS+H +SG  TPPKYGDYEAQRHWMEITL++P+K+WY
Sbjct:    2 EKKKKATKPTRDDSESNIWSFVTQRGTTASF------ICITLFAILVRIAVSIHPYSGAGTPPKYGDYEAQRHWMEITLNLPVKEWY 82          
BLAST of EWM21075.1 vs. NCBI_GenBank
Match: gi|747103821|ref|XP_011100116.1| (probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase [Sesamum indicum])

HSP 1 Score: 86.6557 bits (213), Expect = 2.816e-16
Identity = 49/106 (46.23%), Postives = 64/106 (60.38%), Query Frame = 0
Query:   59 AEKNPSLLEP---------------APPPASSP---FPSPSSSSSSSSSFSFNITSLTIILFALVVRHAVSLHSHSGMHTPPKYGDYEAQRHWMEITLHVPLKDWY 146
            +EKN +LL P               A  P S P     S  ++ S+SS F      L I LFA+++R AV+LH +SG HTPP +GDYEAQRHWMEIT+++P+KDWY
Sbjct:    6 SEKNHTLLNPKTLLRVTNAVHQTNTAAGPESDPNTNIWSFITTRSTSSWF------LCISLFAVLIRLAVALHPYSGAHTPPMFGDYEAQRHWMEITVNLPVKDWY 105          
BLAST of EWM21075.1 vs. NCBI_GenBank
Match: gi|1111032418|ref|XP_019267451.1| (PREDICTED: probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase [Nicotiana attenuata] >gi|1102287760|gb|OIT34373.1| putative dolichyl pyrophosphate man9glcnac2 alpha-1,3-glucosyltransferase [Nicotiana attenuata])

HSP 1 Score: 86.2705 bits (212), Expect = 3.377e-16
Identity = 41/74 (55.41%), Postives = 55/74 (74.32%), Query Frame = 0
Query:   79 SPSSSSSSSSSFSF------NITSLTIILFALVVRHAVSLHSHSGMHTPPKYGDYEAQRHWMEITLHVPLKDWY 146
            +P+S  S S+ +SF        + + I LFA++VR AVS+H +SG  TPPKYGDYEAQRHWMEITL++P+K+WY
Sbjct:    9 NPTSDDSESNLWSFLTPRGTTASFVCITLFAILVRVAVSIHPYSGAGTPPKYGDYEAQRHWMEITLNLPVKEWY 82          
BLAST of EWM21075.1 vs. NCBI_GenBank
Match: gi|698474293|ref|XP_009784660.1| (PREDICTED: probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase [Nicotiana sylvestris])

HSP 1 Score: 86.2705 bits (212), Expect = 3.410e-16
Identity = 41/74 (55.41%), Postives = 55/74 (74.32%), Query Frame = 0
Query:   79 SPSSSSSSSSSFSF------NITSLTIILFALVVRHAVSLHSHSGMHTPPKYGDYEAQRHWMEITLHVPLKDWY 146
            +P+S  S S+ +SF        + + I LFA++VR AVS+H +SG  TPPKYGDYEAQRHWMEITL++P+K+WY
Sbjct:    9 NPTSDDSESNLWSFLTPRGTTASFVCITLFAILVRVAVSIHPYSGAGTPPKYGDYEAQRHWMEITLNLPVKEWY 82          
BLAST of EWM21075.1 vs. NCBI_GenBank
Match: gi|1025261266|ref|XP_016491185.1| (PREDICTED: probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X1 [Nicotiana tabacum])

HSP 1 Score: 86.2705 bits (212), Expect = 3.476e-16
Identity = 41/74 (55.41%), Postives = 55/74 (74.32%), Query Frame = 0
Query:   79 SPSSSSSSSSSFSF------NITSLTIILFALVVRHAVSLHSHSGMHTPPKYGDYEAQRHWMEITLHVPLKDWY 146
            +P+S  S S+ +SF        + + I LFA++VR AVS+H +SG  TPPKYGDYEAQRHWMEITL++P+K+WY
Sbjct:    9 NPTSDDSESNLWSFLTPRGTTASFVCITLFAILVRVAVSIHPYSGAGTPPKYGDYEAQRHWMEITLNLPVKEWY 82          
BLAST of EWM21075.1 vs. NCBI_GenBank
Match: gi|1025261270|ref|XP_016491186.1| (PREDICTED: probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X2 [Nicotiana tabacum])

HSP 1 Score: 85.8853 bits (211), Expect = 3.506e-16
Identity = 41/74 (55.41%), Postives = 55/74 (74.32%), Query Frame = 0
Query:   79 SPSSSSSSSSSFSF------NITSLTIILFALVVRHAVSLHSHSGMHTPPKYGDYEAQRHWMEITLHVPLKDWY 146
            +P+S  S S+ +SF        + + I LFA++VR AVS+H +SG  TPPKYGDYEAQRHWMEITL++P+K+WY
Sbjct:    9 NPTSDDSESNLWSFLTPRGTTASFVCITLFAILVRVAVSIHPYSGAGTPPKYGDYEAQRHWMEITLNLPVKEWY 82          
The following BLAST results are available for this feature:
BLAST of EWM21075.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101120|gb|EWM21075.1|8.892e-139100.00alpha- -glucosyltransferase [Nannochloropsis gadit... [more]
gi|1026018471|ref|XP_016541102.1|2.114e-1748.28PREDICTED: probable dolichyl pyrophosphate Man9Glc... [more]
gi|1109215911|ref|XP_019182415.1|1.163e-1674.00PREDICTED: probable dolichyl pyrophosphate Man9Glc... [more]
gi|1026028924|ref|XP_016560722.1|1.518e-1648.28PREDICTED: probable dolichyl pyrophosphate Man9Glc... [more]
gi|1026028922|ref|XP_016560721.1|2.188e-1648.28PREDICTED: probable dolichyl pyrophosphate Man9Glc... [more]
gi|747103821|ref|XP_011100116.1|2.816e-1646.23probable dolichyl pyrophosphate Man9GlcNAc2 alpha-... [more]
gi|1111032418|ref|XP_019267451.1|3.377e-1655.41PREDICTED: probable dolichyl pyrophosphate Man9Glc... [more]
gi|698474293|ref|XP_009784660.1|3.410e-1655.41PREDICTED: probable dolichyl pyrophosphate Man9Glc... [more]
gi|1025261266|ref|XP_016491185.1|3.476e-1655.41PREDICTED: probable dolichyl pyrophosphate Man9Glc... [more]
gi|1025261270|ref|XP_016491186.1|3.506e-1655.41PREDICTED: probable dolichyl pyrophosphate Man9Glc... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9629rna9629Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications