EWM21125.1, cds9574 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21125.1 vs. NCBI_GenBank
Match: gi|585101192|gb|EWM21125.1| (Proteasome assembly chaperone 3 [Nannochloropsis gaditana]) HSP 1 Score: 374.015 bits (959), Expect = 4.492e-131 Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0 Query: 1 MCYRIHVKRVAAQERSSHHAGLVIAARQDSHATQFYLPSNTSLHPSTPFRHRLAVHTSPAMRASSSGPPEASTYHETKEINGVLTDVAIFNFSDRIFLTISQNARFGTLISAKADDSVARPGAAPSFDVSVLLGRRDDPLLLIYARQLVETVSRSSSRPLLLSISLRERDPSTFEQVAAWVRPLL 185 MCYRIHVKRVAAQERSSHHAGLVIAARQDSHATQFYLPSNTSLHPSTPFRHRLAVHTSPAMRASSSGPPEASTYHETKEINGVLTDVAIFNFSDRIFLTISQNARFGTLISAKADDSVARPGAAPSFDVSVLLGRRDDPLLLIYARQLVETVSRSSSRPLLLSISLRERDPSTFEQVAAWVRPLL Sbjct: 1 MCYRIHVKRVAAQERSSHHAGLVIAARQDSHATQFYLPSNTSLHPSTPFRHRLAVHTSPAMRASSSGPPEASTYHETKEINGVLTDVAIFNFSDRIFLTISQNARFGTLISAKADDSVARPGAAPSFDVSVLLGRRDDPLLLIYARQLVETVSRSSSRPLLLSISLRERDPSTFEQVAAWVRPLL 185
BLAST of EWM21125.1 vs. NCBI_GenBank
Match: gi|566028629|gb|ETI51540.1| (hypothetical protein F443_05131 [Phytophthora parasitica P1569] >gi|567965979|gb|ETK91439.1| hypothetical protein L915_04993 [Phytophthora parasitica] >gi|567994697|gb|ETL44849.1| hypothetical protein L916_04941 [Phytophthora parasitica] >gi|570956322|gb|ETP21328.1| hypothetical protein F441_05131 [Phytophthora parasitica CJ01A1] >gi|570991533|gb|ETP49254.1| hypothetical protein F442_05189 [Phytophthora parasitica P10297] >gi|970648117|gb|KUF87750.1| Proteasome assembly chaperone 3 [Phytophthora nicotianae]) HSP 1 Score: 101.679 bits (252), Expect = 2.302e-24 Identity = 53/126 (42.06%), Postives = 76/126 (60.32%), Query Frame = 0 Query: 63 ASSSGPPEASTYHETKEINGVLTDVAIFNFSDRIFLTISQNARFGTLISAKADDSVA---RPGAAPSFDVSVLLGRRDDPLLLIYARQLVETVSRSSSRPLLLSISLRERDPSTFEQVAAWVRPLL 185 A ++ PP T + K+INGV TD+A+ F+DR+F+ ++Q FGTL+ A DS++ +P D+ V LGRRDDPLLL+YARQ +E P+L +I L++R TFE V V+ L Sbjct: 2 AEATAPPALHTKKDRKDINGVSTDIAVSIFADRVFIAVTQLGTFGTLVEAHQKDSISGKFQP------DIHVRLGRRDDPLLLVYARQFLEHFGIPVGLPILAAIGLKDRSSGTFEVVMQSVKELF 121
BLAST of EWM21125.1 vs. NCBI_GenBank
Match: gi|675187255|ref|XP_008902512.1| (hypothetical protein PPTG_09334 [Phytophthora parasitica INRA-310] >gi|568023959|gb|ETL98004.1| hypothetical protein L917_04840 [Phytophthora parasitica] >gi|568054382|gb|ETM51165.1| hypothetical protein L914_04948 [Phytophthora parasitica] >gi|568097812|gb|ETN12554.1| hypothetical protein PPTG_09334 [Phytophthora parasitica INRA-310] >gi|570332353|gb|ETO80301.1| hypothetical protein F444_05168 [Phytophthora parasitica P1976]) HSP 1 Score: 100.523 bits (249), Expect = 6.354e-24 Identity = 53/126 (42.06%), Postives = 75/126 (59.52%), Query Frame = 0 Query: 63 ASSSGPPEASTYHETKEINGVLTDVAIFNFSDRIFLTISQNARFGTLISAKADDSVA---RPGAAPSFDVSVLLGRRDDPLLLIYARQLVETVSRSSSRPLLLSISLRERDPSTFEQVAAWVRPLL 185 A ++ PP T + K+INGV TD+A+ F DR+F+ ++Q FGTL+ A DS++ +P D+ V LGRRDDPLLL+YARQ +E P+L +I L++R TFE V V+ L Sbjct: 2 AEATAPPALHTKKDRKDINGVSTDIAVSIFVDRVFIAVTQLGTFGTLVEAHQKDSISGKFQP------DIHVRLGRRDDPLLLVYARQFLEHFGIPVGLPILAAIGLKDRSSGTFEVVMQSVKELF 121
BLAST of EWM21125.1 vs. NCBI_GenBank
Match: gi|695416214|ref|XP_009526780.1| (hypothetical protein PHYSODRAFT_351247 [Phytophthora sojae] >gi|348677905|gb|EGZ17722.1| hypothetical protein PHYSODRAFT_351247 [Phytophthora sojae]) HSP 1 Score: 100.138 bits (248), Expect = 7.234e-24 Identity = 54/123 (43.90%), Postives = 72/123 (58.54%), Query Frame = 0 Query: 63 ASSSGPPEASTYHETKEINGVLTDVAIFNFSDRIFLTISQNARFGTLISAKADDSVARPGAAPSFDVSVLLGRRDDPLLLIYARQLVETVSRSSSRPLLLSISLRERDPSTFEQVAAWVRPLL 185 A + PP T E KEINGV TD+A+ F+DR+F+ +Q FGTL+ A DS++ D+ V LGRRDDPLLL+YARQ +E P+L +I L++R TFE V V+ L Sbjct: 2 AEVAPPPALHTQKERKEINGVPTDIAVSIFADRVFIVATQLGTFGTLVEAHQKDSIS---GKLQPDIHVRLGRRDDPLLLVYARQFLEHFGVPVGLPILAAIGLKDRSSDTFEVVMQSVKELF 121
BLAST of EWM21125.1 vs. NCBI_GenBank
Match: gi|1214686228|gb|OWZ02976.1| (hypothetical protein PHMEG_00025369 [Phytophthora megakarya]) HSP 1 Score: 97.4413 bits (241), Expect = 9.585e-23 Identity = 52/125 (41.60%), Postives = 73/125 (58.40%), Query Frame = 0 Query: 61 MRASSSGPPEASTYHETKEINGVLTDVAIFNFSDRIFLTISQNARFGTLISAKADDSVARPGAAPSFDVSVLLGRRDDPLLLIYARQLVETVSRSSSRPLLLSISLRERDPSTFEQVAAWVRPLL 185 M + + P T + KEINGV TD+A+ F+DR+F+ ++Q FGTL+ A DS++ D+ V LGRRDDPLLL+YARQ +E P+L +I L++R TFE V V+ L Sbjct: 1 MAIAETTPAALHTKKDRKEINGVPTDIAVSIFADRVFIAVTQLGTFGTLVEACQKDSIS---GKLQPDIHVRLGRRDDPLLLVYARQFLEHFGVPLGLPILAAIGLKDRSSDTFEVVMQSVKELF 122
BLAST of EWM21125.1 vs. NCBI_GenBank
Match: gi|953497084|emb|CEG41393.1| (Uncharacterized conserved protein [Plasmopara halstedii]) HSP 1 Score: 96.6709 bits (239), Expect = 1.601e-22 Identity = 52/118 (44.07%), Postives = 73/118 (61.86%), Query Frame = 0 Query: 68 PPEASTYHETKEINGVLTDVAIFNFSDRIFLTISQNARFGTLISAKADDSVARPGAAPSFDVSVLLGRRDDPLLLIYARQLVETVSRSSSRPLLLSISLRERDPSTFEQVAAWVRPLL 185 PP T + K ING+ TD A+ F+DR+F+ ++Q FGTL+ A D+++ G S D+ V LGRRDDPLLL+YARQL+E P+L++I L++R TFE V V+ L Sbjct: 7 PPAVYTKTDWKIINGLPTDFAVSIFADRVFIAVTQLGTFGTLLEAYQKDTIS--GKLQS-DIHVRLGRRDDPLLLVYARQLLEHFGVPVGLPVLVAIGLKDRSSQTFEVVMKCVKELF 121
BLAST of EWM21125.1 vs. NCBI_GenBank
Match: gi|301100812|ref|XP_002899495.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262103803|gb|EEY61855.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 95.5153 bits (236), Expect = 4.241e-22 Identity = 49/117 (41.88%), Postives = 70/117 (59.83%), Query Frame = 0 Query: 69 PEASTYHETKEINGVLTDVAIFNFSDRIFLTISQNARFGTLISAKADDSVARPGAAPSFDVSVLLGRRDDPLLLIYARQLVETVSRSSSRPLLLSISLRERDPSTFEQVAAWVRPLL 185 P T + K+INGV TD+A+ F+DR+F+ ++Q FGTL+ A DS++ D+ + LGRRDDPLLL+YARQ +E P+L +I L++R TFE V V+ L Sbjct: 8 PALHTKKDRKDINGVPTDIAVSIFADRVFIAVTQLGTFGTLVEAYQKDSIS---GKFQPDIHIRLGRRDDPLLLVYARQFLEHFGIPVGLPILAAIGLKDRSSGTFEAVMQSVKELF 121
BLAST of EWM21125.1 vs. NCBI_GenBank
Match: gi|66827883|ref|XP_647296.1| (proteasome assembly chaperone 3 [Dictyostelium discoideum AX4] >gi|74859465|sp|Q55G88.1|PSMG3_DICDI RecName: Full=Proteasome assembly chaperone 3 >gi|60475779|gb|EAL73714.1| proteasome assembly chaperone 3 [Dictyostelium discoideum AX4]) HSP 1 Score: 94.3597 bits (233), Expect = 2.055e-21 Identity = 45/101 (44.55%), Postives = 66/101 (65.35%), Query Frame = 0 Query: 77 TKEINGVLTDVAIFNFSDRIFLTISQNARFGTLISAKADDSVARPGAAPSFDVSVLLGRRDDPLLLIYARQLVETVSRSSSRPLLLSISLRERDPSTFEQV 177 +K+IN V TD+AI +F+D IF+TISQN +F T I A D + PS+ + LLG D L IYARQL+E + +S++ L+LSIS+ ++ TF+Q+ Sbjct: 37 SKKINNVDTDIAISSFADAIFITISQNQKFNTWIRASKSDGILLD--EPSYQIDTLLGNNQDVLFSIYARQLIENIGETSNKSLMLSISITDKSKDTFKQI 135
BLAST of EWM21125.1 vs. NCBI_GenBank
Match: gi|330843370|ref|XP_003293629.1| (hypothetical protein DICPUDRAFT_158520 [Dictyostelium purpureum] >gi|325076031|gb|EGC29855.1| hypothetical protein DICPUDRAFT_158520 [Dictyostelium purpureum]) HSP 1 Score: 93.5893 bits (231), Expect = 3.523e-21 Identity = 48/101 (47.52%), Postives = 66/101 (65.35%), Query Frame = 0 Query: 77 TKEINGVLTDVAIFNFSDRIFLTISQNARFGTLISAKADDSVARPGAAPSFDVSVLLGRRDDPLLLIYARQLVETVSRSSSRPLLLSISLRERDPSTFEQV 177 +K+IN + TD+AI F+D +F+TISQN +F T I A + V PS+ V VLLG D LL IYARQL+E + SS R LLLSIS+ ++ +F+Q+ Sbjct: 33 SKKINNIDTDIAISVFADTVFITISQNQKFNTWIKAYKSEGVLLD--EPSYQVDVLLGSNQDTLLGIYARQLIENIGLSSRRQLLLSISITDKSKDSFKQI 131
BLAST of EWM21125.1 vs. NCBI_GenBank
Match: gi|1013947991|gb|KYR01656.1| (proteasome assembly chaperone 3 [Dictyostelium lacteum]) HSP 1 Score: 93.5893 bits (231), Expect = 4.202e-21 Identity = 45/105 (42.86%), Postives = 67/105 (63.81%), Query Frame = 0 Query: 71 ASTYHETKEINGVLTDVAIFNFSDRIFLTISQNARFGTLISAKADDSVARPGAAPSFDVSVLLGRRDDPLLLIYARQLVETVSRSSSRPLLLSISLRERDPSTFE 175 T + +K IN + TD+ I +FS++IF+TISQN +F T I +S P + V LLG D LL+IYARQL+E + +SS++ LLLSIS++++ TF+ Sbjct: 30 VKTKNISKLINNIQTDIVISSFSNQIFITISQNQKFNTWIQGYKQESTF--SDEPCYTVETLLGNNQDQLLMIYARQLIENIGQSSNKTLLLSISIQDKSKDTFK 132 The following BLAST results are available for this feature:
BLAST of EWM21125.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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