EWM21113.1, cds9571 (CDS) Nannochloropsis gaditana

Overview
NameEWM21113.1
Unique Namecds9571
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037254.1:262377..262486 +
Alignment locationKK037254.1:262636..262732 +
Alignment locationKK037254.1:262863..263017 +
Alignment locationKK037254.1:263146..263383 +
Alignment locationKK037254.1:263476..263597 +
Alignment locationKK037254.1:263789..264070 +
Alignment locationKK037254.1:264172..264280 +
Alignment locationKK037254.1:264457..264543 +
Alignment locationKK037254.1:264704..264848 +
Alignment locationKK037254.1:264993..265048 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21113.1
ProductThioredoxin domain protein
Orig transcript idgnl|cribi|Naga_100041g44.3683.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:262377..262486 +
KK037254.1supercontigKK037254.1:262636..262732 +
KK037254.1supercontigKK037254.1:262863..263017 +
KK037254.1supercontigKK037254.1:263146..263383 +
KK037254.1supercontigKK037254.1:263476..263597 +
KK037254.1supercontigKK037254.1:263789..264070 +
KK037254.1supercontigKK037254.1:264172..264280 +
KK037254.1supercontigKK037254.1:264457..264543 +
KK037254.1supercontigKK037254.1:264704..264848 +
KK037254.1supercontigKK037254.1:264993..265048 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0019725cellular homeostasis
GO:0045454cell redox homeostasis
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005623cell
Vocabulary: INTERPRO
TermDefinition
IPR017937Thioredoxin_CS
IPR013766Thioredoxin_domain
IPR012336Thioredoxin-like_fold
IPR012936Erv_C
Homology
BLAST of EWM21113.1 vs. NCBI_GenBank
Match: gi|585101180|gb|EWM21113.1| (Thioredoxin domain protein [Nannochloropsis gaditana])

HSP 1 Score: 975.696 bits (2521), Expect = 0.000e+0
Identity = 466/466 (100.00%), Postives = 466/466 (100.00%), Query Frame = 0
Query:    1 MAPVSSRGIKSFDFYRKVPLDLTEATWHGGLVSILAILFMLSLFVVELSSFIASTTHSTVVVDFNRDQQIRINFNITMLDVPCEFATVDVLDVLGTNQQNVTKNIEKWNLDQNAQRRMFQGRNREQRDLVHDDHHPALDLAHQDGEHALPLGKDDFAGFVAGQEYVFANFYAPWCVWCQRLAPTWEAFAEALERQQFNIKVVKIDCVEHRDLCAESVIRAFPTLRLYKAGKAISPDYREDRTVEALTSYIERTLDLHAKVASSAPEHREKIERTLFAEAEHPGCLLSGFLLVNRVPGNFHIEARSKYHNLNPTLTNVSHVVHDLTFGPPVTREYREKLALLPKGFQQTRSPLADQVYVVSKVHHAFHHYLKVVSTHYEVSRTFGGQKSTVLQYQMVANSQVMHYQDDEVPEAKFSYDISPLATVISSKKRAWYEFLTSLMAIIGGTFTVLGLLDHMLGKVLKPKKM 466
            MAPVSSRGIKSFDFYRKVPLDLTEATWHGGLVSILAILFMLSLFVVELSSFIASTTHSTVVVDFNRDQQIRINFNITMLDVPCEFATVDVLDVLGTNQQNVTKNIEKWNLDQNAQRRMFQGRNREQRDLVHDDHHPALDLAHQDGEHALPLGKDDFAGFVAGQEYVFANFYAPWCVWCQRLAPTWEAFAEALERQQFNIKVVKIDCVEHRDLCAESVIRAFPTLRLYKAGKAISPDYREDRTVEALTSYIERTLDLHAKVASSAPEHREKIERTLFAEAEHPGCLLSGFLLVNRVPGNFHIEARSKYHNLNPTLTNVSHVVHDLTFGPPVTREYREKLALLPKGFQQTRSPLADQVYVVSKVHHAFHHYLKVVSTHYEVSRTFGGQKSTVLQYQMVANSQVMHYQDDEVPEAKFSYDISPLATVISSKKRAWYEFLTSLMAIIGGTFTVLGLLDHMLGKVLKPKKM
Sbjct:    1 MAPVSSRGIKSFDFYRKVPLDLTEATWHGGLVSILAILFMLSLFVVELSSFIASTTHSTVVVDFNRDQQIRINFNITMLDVPCEFATVDVLDVLGTNQQNVTKNIEKWNLDQNAQRRMFQGRNREQRDLVHDDHHPALDLAHQDGEHALPLGKDDFAGFVAGQEYVFANFYAPWCVWCQRLAPTWEAFAEALERQQFNIKVVKIDCVEHRDLCAESVIRAFPTLRLYKAGKAISPDYREDRTVEALTSYIERTLDLHAKVASSAPEHREKIERTLFAEAEHPGCLLSGFLLVNRVPGNFHIEARSKYHNLNPTLTNVSHVVHDLTFGPPVTREYREKLALLPKGFQQTRSPLADQVYVVSKVHHAFHHYLKVVSTHYEVSRTFGGQKSTVLQYQMVANSQVMHYQDDEVPEAKFSYDISPLATVISSKKRAWYEFLTSLMAIIGGTFTVLGLLDHMLGKVLKPKKM 466          
BLAST of EWM21113.1 vs. NCBI_GenBank
Match: gi|553181165|ref|XP_005853522.1| (hypothetical protein NGA_0271420 [Nannochloropsis gaditana CCMP526] >gi|422295540|gb|EKU22839.1| hypothetical protein NGA_0271420 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 812.757 bits (2098), Expect = 0.000e+0
Identity = 403/466 (86.48%), Postives = 404/466 (86.70%), Query Frame = 0
Query:    1 MAPVSSRGIKSFDFYRKVPLDLTEATWHGGLVSILAILFMLSLFVVELSSFIASTTHSTVVVDFNRDQQIRINFNITMLDVPCEFATVDVLDVLGTNQQNVTKNIEKWNLDQNAQRRMFQGRNREQRDLVHDDHHPALDLAHQDGEHALPLGKDDFAGFVAGQEYVFANFYAPWCVWCQRLAPTWEAFAEALERQQFNIKVVKIDCVEHRDLCAESVIRAFPTLRLYKAGKAISPDYREDRTVEALTSYIERTLDLHAKVASSAPEHREKIERTLFAEAEHPGCLLSGFLLVNRVPGNFHIEARSKYHNLNPTLTNVSHVVHDLTFGPPVTREYREKLALLPKGFQQTRSPLADQVYVVSKVHHAFHHYLKVVSTHYEVSRTFGGQKSTVLQYQMVANSQVMHYQDDEVPEAKFSYDISPLATVISSKKRAWYEFLTSLMAIIGGTFTVLGLLDHMLGKVLKPKKM 466
            MAPVSSRGIKSF                                                  DF R  +IRINFNITMLDVPCEFATVDVLDVLGTNQQNVTKNIEKWNLDQNAQRRMFQGRNREQRDLVHDDHHPALDLAHQDGEHALPLGKDDFAGFVAGQEYVFANFYAPWCVWCQRLAPTWEAFAEALERQQFNIKVVKIDCVEHRDLCAESVIRAFPTLRLYKAGKAISPDYREDRTVEALTSYIERTLDLHAKVASSAPEHREKIERTLFAEAEHPGCLLSGFLLVNRVPGNFHIEARSKYHNLNPTLTNVSHVVHDLTFGPPVTREYREKLALLPKGFQQTRSPLADQVYVVSKVHHAFHHYLKVVSTHYEVSRTFGGQKSTVLQYQMVANSQVMHYQDDEVPEAKFSYDISPLATVISSKKRAWYEFLTSLMAIIGGTFT         GKVLKPKKM
Sbjct:    1 MAPVSSRGIKSF--------------------------------------------------DFYR--KIRINFNITMLDVPCEFATVDVLDVLGTNQQNVTKNIEKWNLDQNAQRRMFQGRNREQRDLVHDDHHPALDLAHQDGEHALPLGKDDFAGFVAGQEYVFANFYAPWCVWCQRLAPTWEAFAEALERQQFNIKVVKIDCVEHRDLCAESVIRAFPTLRLYKAGKAISPDYREDRTVEALTSYIERTLDLHAKVASSAPEHREKIERTLFAEAEHPGCLLSGFLLVNRVPGNFHIEARSKYHNLNPTLTNVSHVVHDLTFGPPVTREYREKLALLPKGFQQTRSPLADQVYVVSKVHHAFHHYLKVVSTHYEVSRTFGGQKSTVLQYQMVANSQVMHYQDDEVPEAKFSYDISPLATVISSKKRAWYEFLTSLMAIIGGTFT---------GKVLKPKKM 405          
BLAST of EWM21113.1 vs. NCBI_GenBank
Match: gi|585102185|gb|EWM21843.1| (Thioredoxin domain protein [Nannochloropsis gaditana])

HSP 1 Score: 507.294 bits (1305), Expect = 8.834e-175
Identity = 245/459 (53.38%), Postives = 324/459 (70.59%), Query Frame = 0
Query:    5 SSRGIKSFDFYRKVPLDLTEATWHGGLVSILAILFMLSLFVVELSSFIASTTHSTVVVDFNRDQQIRINFNITMLDVPCEFATVDVLDVLGTNQQNVTKNIEKWNLDQNAQRRMFQGRNREQRDLVHDDHHPALDLAHQDGEHALPLGKDDFAGFVAGQEYVFANFYAPWCVWCQRLAPTWEAFAEALERQQFNIKVVKIDCVEHRDLCAESVIRAFPTLRLYKAGKAISPDYREDRTVEALTSYIERTLDLHAKVASSAPEHREKIERTLFAEAEHPGCLLSGFLLVNRVPGNFHIEARSKYHNLNPTLTNVSHVVHDLTFGPPVTREYREKLALLPKGFQQTRSPLADQVYVVSKVHHAFHHYLKVVSTHYEVSRTFGGQKSTVLQYQMVANSQVMHYQDDEVPEAKFSYDISPLATVISSKKRAWYEFLTSLMAIIGGTFTVLGLLDHMLGKVLKP 463
            S+RG+   D YR+VP DLTE +  GGL SI+A +FM++LF+VEL SF++  T + VV+D + DQ I+INFN+TMLD+PC +A VDVLDVLGTN+ NV+KNIEKWNLD+  +RR FQGRNRE+R ++HD+HH AL++  Q+GEHA+PL  D F  ++   E+ F +FYAPWC+WCQRLAPTWEAFAE +E  Q  +KV KIDCV H  LC +  + AFPTLR++   + + PDY  DRT+ ALTS++ R L +  K   S PE  ++         EHPGC+LSG LLVNRVPGNFHIEARS  HNLN  +TN+SHVV+ L+FGP    +   +L      F  + + L  + +V+ + H A HHYLKVV T YEV   +G  ++ +L YQM+  + +M Y  DEVPEAKFSY++SP+A ++    R WYEF+TSL  I+GGTFTV+GLLD  L ++LKP
Sbjct:    7 SARGM---DLYRRVPADLTETSTLGGLFSIVAGVFMVALFIVELISFMSHRTETMVVLDHSHDQLIQINFNVTMLDLPCRYAVVDVLDVLGTNRMNVSKNIEKWNLDEAGRRRYFQGRNREERSILHDEHHGALEVLLQNGEHAVPLAADSFDEYLESNEFTFVSFYAPWCIWCQRLAPTWEAFAEHVEEAQIPVKVAKIDCVTHAQLCRDQKVHAFPTLRMFNRARPLPPDYNTDRTLVALTSFVTRKLAVEEK-KKSWPERDQEY-------VEHPGCMLSGHLLVNRVPGNFHIEARSAVHNLNAAMTNLSHVVNHLSFGPLYDSQVLSRLERFSSEFYVSNA-LDGRDFVLEEPHKAHHHYLKVVGTLYEVPMRWG--RADMLTYQMLPETSLMTYGLDEVPEAKFSYEVSPMAVIVKKTGRRWYEFVTSLCGILGGTFTVVGLLDSTLHRLLKP 451          
BLAST of EWM21113.1 vs. NCBI_GenBank
Match: gi|1210520507|dbj|GAX20665.1| (hypothetical protein FisN_32Hh054 [Fistulifera solaris])

HSP 1 Score: 481.485 bits (1238), Expect = 2.097e-164
Identity = 236/471 (50.11%), Postives = 318/471 (67.52%), Query Frame = 0
Query:    7 RGIKSFDFYRKVPLDLTEATWHGGLVSILAILFMLSLFVVELSSFIASTTHSTVVVDFNRDQQIRINFNITMLDVPCEFATVDVLDVLGTNQQNVTKNIEKWNLDQNAQRRMFQGRNREQRDLVHDDHHPALDLAH-QDGEHALPLGKDDFAGFVAGQEYVFANFYAPWCVWCQRLAPTWEAFAEALERQQFNIKVVKIDCVEHRDLCAESVIRAFPTLRLYKAGKAISPDYREDRTVEALTSYIERTLDLHAKVA------SSAPEHREKIERTLFAE--AEHPGCLLSGFLLVNRVPGNFHIEARSKYHNLNPTLTNVSHVVHDLTFGPPVTREYREKLALLPKGFQQTR--SPLADQVYVVSKVHHAFHHYLKVVSTHYEVSRTFGGQKSTVLQYQMVANSQVMHYQDDEVPEAKFSYDISPLATVISSKKRAWYEFLTSLMAIIGGTFTVLGLLDHMLGKVLKPKKM 466
            + + S DFYR+VP DLTEAT  G  +S  A++ M  LF  E  +F  + T +T+ VD N   QIR+NFNITMLD+ C+F +VDV D LGTN+QNVTKN++KW LD+  +RR+F GRNRE R+L HD+H   L+  H ++G HA+ L K++F  F+      F + YAPWCVWCQRLAPTWE  A+ +++ +  + V K+DC+   DLC E  I AFPTLR Y  G+ +SPDY+ DRTV AL  Y +R LD+  K          A E     +R+L+ +   +HPGC +SG L+VNRVPGNFHIEA+SK  NLN  LTNVSH+V+ L+FG PV +  R+   +L +  ++ +  SP+ + VYV    H A HHY+KVVSTH E+ ++   + +T   YQ +  SQV+HY D +VPEA+FSYDISP++ V+S + R WY++LTSL AIIGGTFT LGL+D +L  VLKPKK+
Sbjct:   12 QALSSVDFYRRVPKDLTEATTLGAFMSACAMIVMAVLFFSETLAFATTETVTTIAVDENTSPQIRLNFNITMLDLHCDFVSVDVWDALGTNRQNVTKNVDKWQLDEEGKRRIFSGRNREARELKHDEHDKTLEEMHAEEGVHAIALTKENFKPFLEENPMAFIDLYAPWCVWCQRLAPTWETLAQEVKKLEMPVGVAKVDCMAEADLCREQKIMAFPTLRWYHDGEPVSPDYKMDRTVTALIGYAKRKLDMDEKFKEWDKKNEQADEEERARKRSLYQQNRPDHPGCQVSGHLMVNRVPGNFHIEAKSKNFNLNAALTNVSHIVNHLSFGDPVDQTSRKTKRILKQVDEKHKQFSPMDNSVYVTEMSHAAHHHYIKVVSTHLEMGQSSNNRLTT---YQFLEQSQVVHYFDTDVPEARFSYDISPMSVVVSKEGRKWYDYLTSLCAIIGGTFTTLGLIDAILYSVLKPKKL 479          
BLAST of EWM21113.1 vs. NCBI_GenBank
Match: gi|1210528478|dbj|GAX12875.1| (hypothetical protein FisN_32Lh054 [Fistulifera solaris])

HSP 1 Score: 479.559 bits (1233), Expect = 1.323e-163
Identity = 234/471 (49.68%), Postives = 318/471 (67.52%), Query Frame = 0
Query:    7 RGIKSFDFYRKVPLDLTEATWHGGLVSILAILFMLSLFVVELSSFIASTTHSTVVVDFNRDQQIRINFNITMLDVPCEFATVDVLDVLGTNQQNVTKNIEKWNLDQNAQRRMFQGRNREQRDLVHDDHHPALDLAH-QDGEHALPLGKDDFAGFVAGQEYVFANFYAPWCVWCQRLAPTWEAFAEALERQQFNIKVVKIDCVEHRDLCAESVIRAFPTLRLYKAGKAISPDYREDRTVEALTSYIERTLDLHAKVAS------SAPEHREKIERTLFAE--AEHPGCLLSGFLLVNRVPGNFHIEARSKYHNLNPTLTNVSHVVHDLTFGPPVTREYREKLALLPKGFQQTR--SPLADQVYVVSKVHHAFHHYLKVVSTHYEVSRTFGGQKSTVLQYQMVANSQVMHYQDDEVPEAKFSYDISPLATVISSKKRAWYEFLTSLMAIIGGTFTVLGLLDHMLGKVLKPKKM 466
            + + S DFYR+VP DLTEAT  G  +S  A++ M  LF  E  +F  + T +T+ VD N   QIR+NFNITMLD+ C++ +VDV D LGTN+QNVTKN++KW LD+  +RR+F GRNRE R+L HD+H   L+  H ++G HA+ L K++F  F+      F + YAPWCVWCQRLAPTWE  A+ +++ +  + V K+DC+   DLC E  I AFPTLR Y  G+ +SPDY+ DRTV AL  Y +R LD+  K          A E     +R+L+ +   EHPGC +SG L+VNRVPGNFHIEA+SK  NLN  LTNVSH+V+ L+FG PV +  R+   +L +  ++ +  +P+ + VYV    H A HHY+KVVSTH E+ ++   + +T   YQ +  SQV+HY D +VPEA+FSYDISP++ V+S + R WY++LTSL AIIGGTFT LGL+D +L  +LKPKK+
Sbjct:   12 QALSSVDFYRRVPKDLTEATILGAFMSACAMIVMAVLFFSETLAFATTETVTTIAVDENTSPQIRLNFNITMLDLHCDYVSVDVWDALGTNRQNVTKNVDKWQLDEEGKRRIFSGRNREARELKHDEHDKTLEEMHAEEGVHAIALTKENFKPFLEENPMAFIDLYAPWCVWCQRLAPTWETLAQEVKKLEMPVGVAKVDCMAEADLCREQKIMAFPTLRWYHDGEPVSPDYKMDRTVTALIGYAKRKLDMDEKFKEWDKKNQQADEEERARKRSLYQQNRPEHPGCQVSGHLMVNRVPGNFHIEAKSKNFNLNAALTNVSHIVNHLSFGEPVDQTSRKTKRILKQVDEKHKQFAPMDNTVYVTEMSHAAHHHYIKVVSTHLEMGQSSNNRLTT---YQFLEQSQVVHYFDTDVPEARFSYDISPMSVVVSKEGRKWYDYLTSLCAIIGGTFTTLGLIDAVLYSILKPKKL 479          
BLAST of EWM21113.1 vs. NCBI_GenBank
Match: gi|219125194|ref|XP_002182871.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405665|gb|EEC45607.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 474.937 bits (1221), Expect = 6.951e-162
Identity = 227/470 (48.30%), Postives = 318/470 (67.66%), Query Frame = 0
Query:    9 IKSFDFYRKVPLDLTEATWHGGLVSILAILFMLSLFVVELSSFIASTTHSTVVVDFNRDQQIRINFNITMLDVPCEFATVDVLDVLGTNQQNVTKNIEKWNLDQNAQRRMFQGRNREQRDLVHDDHHPALDLAH-QDGEHALPLGKDDFAGFVAGQEYVFANFYAPWCVWCQRLAPTWEAFAEALERQQFNIKVVKIDCVEHRDLCAESVIRAFPTLRLYKAGKAISPDYREDRTVEALTSYIERTLDL-------HAKVASSAPEHREKIERTLFAE--AEHPGCLLSGFLLVNRVPGNFHIEARSKYHNLNPTLTNVSHVVHDLTFGPPVTREYREKLALLPKGFQQTR--SPLADQVYVVSKVHHAFHHYLKVVSTHYEVSRTFGGQKSTVLQYQMVANSQVMHYQDDEVPEAKFSYDISPLATVISSKKRAWYEFLTSLMAIIGGTFTVLGLLDHMLGKVLKPKKM 466
            + S DFYR+VP DLTEAT  G ++S+ A++ M  LF+ E ++F  +   +++ +D N   QIR+NFNIT+ D+ C++ ++DV D LGTN+QNVTKNI+KW LD    RR+F GRNRE R++VHD H  +LD  H +DG+  + L  D F  F+   E  F + YAPWCVWCQRLAPTWE FA+ ++++   I V KIDC+   DLC    + AFPTLR Y  GKA++PDY+ DRT+ ALTS+ +R LD+       H+K + SA     + +R L+ +   +HPGC +SG L+VNRVPGNFH+EA+SK HNLN  +TN+SHVV+ L+FG P+    R+   +L +  ++ R  +P+  Q ++    H AFHHY+KVVSTH  +  +     +++L YQ +  SQ++ Y D  VPEA+FSYD+SP++ V+  + R WY++LTSL AIIGGTFT LGL+D  L KVLKPKK+
Sbjct:    1 MSSVDFYRRVPKDLTEATSLGAIMSVCALVVMGVLFLSETAAFARTGIATSITLDENTSPQIRLNFNITLTDLQCDYVSIDVWDALGTNKQNVTKNIDKWQLDAQGIRRIFSGRNREGREVVHDSHDRSLDEIHSEDGKAVVDLTADTFDDFMEEHEMAFVDLYAPWCVWCQRLAPTWELFAQEVKKEGMPIGVAKIDCMAEADLCRAQRVMAFPTLRWYHEGKAVAPDYKMDRTIPALTSFAKRKLDMDEKFKEWHSKASDSADPAEVEKKRQLYQQNRPDHPGCQVSGHLMVNRVPGNFHLEAKSKSHNLNAAMTNLSHVVNHLSFGEPIDENNRKSKRILKQVPEEHRQFAPMDGQAFLTKAFHQAFHHYIKVVSTHLNMGSS---DANSMLTYQFLEQSQIVFYDDVNVPEARFSYDLSPMSVVVEKEGRKWYDYLTSLCAIIGGTFTTLGLIDATLYKVLKPKKL 467          
BLAST of EWM21113.1 vs. NCBI_GenBank
Match: gi|299115405|emb|CBN74236.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 472.626 bits (1215), Expect = 2.285e-161
Identity = 230/462 (49.78%), Postives = 316/462 (68.40%), Query Frame = 0
Query:    9 IKSFDFYRKVPLDLTEATWHGGLVSILAILFMLSLFVVELSSFIASTTHSTVVVDFNRDQQIRINFNITMLDVPCEFATVDVLDVLGTNQQNVTKNIEKWNLDQNAQRRMFQGRNREQRDLVHDDHHPALDLAHQDGEHALPLGKDDFAGFVAGQEYVFANFYAPWCVWCQRLAPTWEAFAEALERQ---QFNIKVVKIDCVEHRDLCAESVIRAFPTLRLYKAGKAISPDYREDRTVEALTSYIERTLDLHAKVASSAPEHREKIERTLFAEAEHPGCLLSGFLLVNRVPGNFHIEARSKYHNLNPTLTNVSHVVHDLTFGPPVTREYREKLALLPKGFQQTRSP-LADQVYVVSKVHHAFHHYLKVVSTHYEVSRTFGGQKSTVLQYQMVANSQVMHYQDDEVPEAKFSYDISPLATVISSKKRAWYEFLTSLMAIIGGTFTVLGLLDHMLGKVLKPKKM 466
            IK+FDFYRK+PLDLTE T  G ++S  A+  ML LF+ EL +F+    ++TV +D N+D ++RINFNITML +PC++A+VDVLD+LGTN+ N+T+NI KW+ D+N  +R F GRN+ Q  + HDDHH  LDLAH+DGEHA+PL   +F  F+ G + V  +F+APWCVWC +LAPTWEAFAE +ER       + V K+DCVE R+LC+   + AFPT+R +K G     DY +DR+V +L  Y +      AKV        + + R    + ++PGC LSGF++VNRVPGNFHIEARS  H+++PT  N+SHVV  L FG  V    R    ++  G +    P L D+VY +  +H A HHY+KVVST        G  K+  LQYQM+ +SQ M Y+ D+VPEAKFSYD+SP++  I  ++R WY+FLTS++AI+GGTFTV+G+LD++L +V+K KK+
Sbjct:    4 IKTFDFYRKIPLDLTETTLQGAVMSGCALFCMLILFLCELRAFLTPEVYTTVAIDSNQDSKLRINFNITMLALPCDYASVDVLDLLGTNKVNMTQNIVKWHTDENGVKREFHGRNKAQEMVKHDDHHRDLDLAHEDGEHAVPLTSSNFKDFIQGNDNVMVDFFAPWCVWCIKLAPTWEAFAEEVERDASLNGKLMVAKVDCVEERELCSTQNLMAFPTIRYFKGGVQDGTDYSKDRSVTSLVQYAQ------AKVGGD----EKALRRYGRLKQDYPGCQLSGFIMVNRVPGNFHIEARSALHSIDPTAANISHVVKTLKFGTQVPVRGRR---VIESGVELEGLPALEDRVYSIDSLHTAPHHYIKVVSTF-----VGGLAKTDNLQYQMMVSSQTMPYEQDQVPEAKFSYDLSPMSVHIKQRRRKWYDFLTSVLAIVGGTFTVVGVLDNILFRVVKQKKI 447          
BLAST of EWM21113.1 vs. NCBI_GenBank
Match: gi|1072238185|gb|OEU22912.1| (DUF1692-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 466.077 bits (1198), Expect = 2.165e-158
Identity = 224/472 (47.46%), Postives = 319/472 (67.58%), Query Frame = 0
Query:    9 IKSFDFYRKVPLDLTEATWHGGLVSILAILFMLSLFVVELSSFIASTTHSTVVVDFNRDQQIRINFNITMLDVPCEFATVDVLDVLGTNQQNVTKNIEKWNLDQNAQRRMFQGRNREQRDLVHDDHHPALDLAH-QDGEHALPLGKDDFAGFVAGQEYVFANFYAPWCVWCQRLAPTWEAFAEALERQQFNIKVVKIDCVEHRDLCAESVIRAFPTLRLYKAGKAISPDYREDRTVEALTSYIERTLDLHAKV------ASSAPEHREKIE--RTLFAEA--EHPGCLLSGFLLVNRVPGNFHIEARSKYHNLNPTLTNVSHVVHDLTFGPPVTREYREK---LALLPKGFQQTRSPLADQVYVVSKVHHAFHHYLKVVSTHYEVSRTFGGQKSTVLQYQMVANSQVMHYQDDEVPEAKFSYDISPLATVISSKKRAWYEFLTSLMAIIGGTFTVLGLLDHMLGKVLKPKKM 466
            + + DFYR+VP DLTEAT  G  +S++A+  M  LF  E  +F  +   +++ +D N   Q+R+NFNITMLD+ C++ +VDV D LGTN+QNVTKN+EKW L ++   R+F GRNREQR++ H++H   L+  H +DG  A  L KD+F G++   E  F + YAPWCVWCQRL PTWE FA+ ++  +  + V K+DC++  DLC +  + AFPTLR Y  GKA++P+Y+ DRTV AL  + +R L+++ K       A    E    IE  R LF+++  EHP C +SG L+VNRVPGNFHIEA+SK HNLN  +TN++HVV+ ++FG P+ ++ R     L  +P+  QQ  +P+ + +Y+  + H A+HHY+KVVSTH  V  T   Q   +L YQ +  SQV++Y++  VPEA+FSYD+SP++ V+  + R WY++LTSL AIIGGTFT LGL+D +L KV KPKK+
Sbjct:    1 MSNVDFYRRVPKDLTEATTLGAAMSLVALSIMGILFFSETMAFARTKIATSITLDENTQPQLRLNFNITMLDIHCDYVSVDVWDALGTNRQNVTKNVEKWQLSEDGNTRLFSGRNREQREVRHEEHDRTLEEMHEEDGVQAFELKKDNFKGWLEEHEMAFVDMYAPWCVWCQRLGPTWEKFAQEVKTLKMPVGVGKLDCMQEADLCRDEKVMAFPTLRWYDNGKAVAPEYKMDRTVTALVGFAKRKLEMNDKFKDWEKGAVDRGESDADIEKKRKLFSQSRTEHPSCQVSGHLMVNRVPGNFHIEAKSKNHNLNSAMTNLTHVVNHMSFGEPLDQQSRRAKRILKQVPEEHQQF-NPMDNSMYLTKEFHQAYHHYIKVVSTHLNVGSTVANQ---MLTYQFLEQSQVVYYEESNVPEARFSYDLSPMSVVVEKEGRKWYDYLTSLCAIIGGTFTTLGLIDAVLYKVFKPKKL 468          
BLAST of EWM21113.1 vs. NCBI_GenBank
Match: gi|224013158|ref|XP_002295231.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220969193|gb|EED87535.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 454.136 bits (1167), Expect = 1.963e-153
Identity = 234/489 (47.85%), Postives = 316/489 (64.62%), Query Frame = 0
Query:    2 APVSSRGIKSFDFYRKVPLDLTEATWHGGLVSILAILFMLSLFVVELSSFIASTTHSTVVVDFNRDQQIRINFNITMLDVPCEFATVDVLDVLGTNQQNVTKNIEKWNLDQNAQRRMFQGRNREQRDLVHDDHHPALDLAHQDGEHALPLGKDDFAGFVAGQEYVFANFYAPWCVWCQRLAPTWEAFAEALERQQFNIKVVKIDCVEHRDLCAESVIRAFPTLRLYKAGKAISPDYREDRTVEALTSYIERTLDL-------HAKVASSAPEHREKIERTLFAEAEHPGCLLSGFLLVNRVPGNFHIEARSKYHNLNPTLTNVSHVVHDLTFGPPVT------------REYREKLALLPKGFQQTRSPLADQVYVVSKVHHAFHHYLKVVSTHYEVSRTFGGQKS-----TVLQYQMVANSQVMHYQDDEVPEAKFSYDISPLATVISSKKRAWYEFLTSLMAIIGGTFTVLGLLDHMLGKVLKPKKM 466
             P     + S DFYR+VP DLTEAT  G ++SI AI  M  LF  E  +F  +   +++ +D N   QIR+NFNIT++D+ C+F +VDV D LGTN+QNVTKNIEKW LD++ QRR+F GRNREQR++VH++H   L+  H+DGE A+ L  ++F  F+ G +  F + YAPWC+WCQRL PTWE F E +      + V K+DCV H  LC +  + AFPTLR YK G+AI PDY+ DRTV+AL  Y +R LD+        +K A    + R K  R   +  EHPGC +SG L+VNRVPGNFHIEA+S  HNLN  +TN++H V+ L+FG P+T            R+ +  L  +P+  +Q  +P+ D  YV ++ H AFHHY+KVVSTH  +  +   + S      V  YQM+  SQ++ Y +  VPEA+FSYD+SP++ V+  + R WY++LTSL AIIGGTFT LGL+D  L KV KPKK+
Sbjct:    6 GPGRRSAMSSVDFYRRVPKDLTEATSLGAIMSICAITVMAILFFSETLAFARTAMVTSIALDENDQPQIRLNFNITLMDLHCDFVSVDVWDTLGTNRQNVTKNIEKWQLDEDGQRRIFSGRNREQREVVHEEHEETLEELHEDGEQAVELHPENFKAFLEGHDMAFIDMYAPWCIWCQRLHPTWEKFGEKVHELGMPVGVGKVDCVVHAQLCKDEKVMAFPTLRWYKDGEAILPDYKMDRTVDALVGYAKRKLDMEQKYKDWESKNAGGNADARGK-PRGGTSRPEHPGCQVSGHLMVNRVPGNFHIEAKSVNHNLNAAMTNLTHRVNHLSFGEPITKLPPHMENTPFMRKVKRVLKQVPEEHKQF-NPMDDTEYVTAQFHQAFHHYIKVVSTHLNMGSSSKSEYSVNDVNAVTVYQMLEQSQIVFYDEVNVPEARFSYDMSPMSVVVQKEGRKWYDYLTSLCAIIGGTFTTLGLIDATLYKVFKPKKL 492          
BLAST of EWM21113.1 vs. NCBI_GenBank
Match: gi|397641928|gb|EJK74922.1| (hypothetical protein THAOC_03372 [Thalassiosira oceanica])

HSP 1 Score: 430.639 bits (1106), Expect = 6.963e-143
Identity = 218/468 (46.58%), Postives = 306/468 (65.38%), Query Frame = 0
Query:   18 VPLDLTEATWHGGLVSILAILFMLSLFVVELSSFIASTTHSTVVVDFNRDQQIRINFNITMLDVPCEFATVDVLDVLGTNQQNVTKNIEKWNLDQNAQRRMFQGRNREQRDLVHDDHHPALDLAHQDGEHALPLGKDDFAGFVAGQEYVFANFYAPWCVWCQRLAPTWEAFAEALERQQFNIKVVKIDCVEHRDLCAESVIRAFPTLRLYKAGKAISPDYREDRTVEALTSYIERTLDLHAKVA------SSAPEHREKIERTLFAEAEHPGCLLSGFLLVNRVPGNFHIEARSKYHNLNPTLTNVSHVVHDLTFGPPVT------------REYREKLALLPKGFQQTRSPLADQVYVVSKVHHAFHHYLKVVSTHYEV-SRTFGGQKSTVLQYQMVANSQVMHYQDDEVPEAKFSYDISPLATVISSKKRAWYEFLTSLMAIIGGTFTVLGLLDHMLGKVLKPKKM 466
             PL   +AT  G L+SI AI  M  LF+ E  +F  +T  + + +D N   QIR+NFNIT++D+ C++ +VDV D LGTN+QNVTKNIEKW LD++ QRR+F GRNR+QR++VH++H   L+  H+DG  A+ L  D F  F+   E  F + YAPWC+WCQRL PTWE FAE +  Q   + V K++CV +  LC +  + AFPTLR YK G+AI PDY+ DRTV AL+ Y +R L++  K        ++ P ++        +  EHPGC +SG L+VNRVPGNFHIEA+S  HNLN  +TN++H V+ ++FG P+T            R+ +  L  +P+  +Q  +P+ DQ Y+ ++ H AFHHY+KVVSTH  + S +     +++  YQM+  SQ++ Y +  VPEA+FSYD+SP++ V+  + R WY++LTSL AIIGGTFT LGL+D  L KV KPKK+
Sbjct:  117 TPLFTFQATSLGALMSICAISVMGILFLSETLAFARTTMRTAIALDENDQPQIRLNFNITLMDLHCDYVSVDVWDTLGTNRQNVTKNIEKWQLDESGQRRIFSGRNRDQREVVHEEHEETLEELHEDGAQAVELTPDSFKPFLMSHEMAFIDMYAPWCIWCQRLHPTWEKFAEEVYSQGMPVGVGKVNCVVYGQLCKDEKVMAFPTLRWYKGGEAILPDYKMDRTVAALSGYAKRKLEMEQKYKDWEQKNANDPSNKRGRPNAGKSRPEHPGCQVSGHLMVNRVPGNFHIEAKSVNHNLNAAMTNLTHRVNHISFGEPITKLPYHMENTPFMRKVKRVLKQVPEEHKQF-NPMDDQEYITTQFHQAFHHYIKVVSTHLNMGSSSTVNDVNSITVYQMLEQSQIVFYDEVNVPEARFSYDMSPMSVVVQKEGRKWYDYLTSLCAIIGGTFTTLGLIDATLYKVFKPKKL 583          
The following BLAST results are available for this feature:
BLAST of EWM21113.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101180|gb|EWM21113.1|0.000e+0100.00Thioredoxin domain protein [Nannochloropsis gadita... [more]
gi|553181165|ref|XP_005853522.1|0.000e+086.48hypothetical protein NGA_0271420 [Nannochloropsis ... [more]
gi|585102185|gb|EWM21843.1|8.834e-17553.38Thioredoxin domain protein [Nannochloropsis gadita... [more]
gi|1210520507|dbj|GAX20665.1|2.097e-16450.11hypothetical protein FisN_32Hh054 [Fistulifera sol... [more]
gi|1210528478|dbj|GAX12875.1|1.323e-16349.68hypothetical protein FisN_32Lh054 [Fistulifera sol... [more]
gi|219125194|ref|XP_002182871.1|6.951e-16248.30predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|299115405|emb|CBN74236.1|2.285e-16149.78conserved unknown protein [Ectocarpus siliculosus][more]
gi|1072238185|gb|OEU22912.1|2.165e-15847.46DUF1692-domain-containing protein [Fragilariopsis ... [more]
gi|224013158|ref|XP_002295231.1|1.963e-15347.85predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|397641928|gb|EJK74922.1|6.963e-14346.58hypothetical protein THAOC_03372 [Thalassiosira oc... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9602rna9602Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications