EWM29709.1, cds956 (CDS) Nannochloropsis gaditana

Overview
NameEWM29709.1
Unique Namecds956
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:827420..827645 +
Alignment locationCM002456.1:827753..827916 +
Alignment locationCM002456.1:828017..829390 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29709.1
Productwd repeat protein
Orig transcript idgnl|cribi|Naga_100124g3.8330.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:827420..827645 +
CM002456.1supercontigCM002456.1:827753..827916 +
CM002456.1supercontigCM002456.1:828017..829390 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR017986WD40_repeat_dom
IPR015943WD40/YVTN_repeat-like_dom
IPR001680WD40_repeat
Homology
BLAST of EWM29709.1 vs. NCBI_GenBank
Match: gi|585112287|gb|EWM29709.1| (wd repeat protein [Nannochloropsis gaditana])

HSP 1 Score: 1222.61 bits (3162), Expect = 0.000e+0
Identity = 587/587 (100.00%), Postives = 587/587 (100.00%), Query Frame = 0
Query:    1 MNGKGAPDEPMNIEQMRFQVVDKDTGQIFRIDEMEQHININAYTLFPSRDELAQKLASSAVQAGDSDDETPTSPKSGLSLTGLSALSSMLGFPKKKDVHRQDPVEGLVRVSTVRKEGPDFGDLKLSQCLQAHDGPIWTMKFSIGGEFLASAGQSGIVYVWSVGHSGFSRSGGDGSDREAPVTDEAEAPGGLDVLKLLRLSPHRRFRDHTADVIDLSWNKENFLLSASIDKTVRLWHTARSECLHVYPHVDCVTAVDFHPKIDHLFLSGNFDKKLRVWNVTDGRVKEWANTPDMITAACFSPEGSMAVAGLYRGQVFFYQTEGMKYYTQVECRNRHGALKGGKKVTGLCYDTSSHTVAAAFPPSSSGGATTPGPRLQGAPSTSGGHSSSFPVSSGPVSAPGPTPHSVTGAGCEQLLITTNDSRLRLYQTEDYSMLCKYKGLTNDHMQIKASFSEDGKYVISGSENGQIYIWKGTTPQHGHAGGLAGLSAPLTFKKDRNTAYEFFPSTEIGGINPPIVSVALFVPANAVWHAMKGTSYEEEALNAGPGLPISKMIISADYSGKIRVFQRHVLTKEKTDRNTGSHFNKKA 587
            MNGKGAPDEPMNIEQMRFQVVDKDTGQIFRIDEMEQHININAYTLFPSRDELAQKLASSAVQAGDSDDETPTSPKSGLSLTGLSALSSMLGFPKKKDVHRQDPVEGLVRVSTVRKEGPDFGDLKLSQCLQAHDGPIWTMKFSIGGEFLASAGQSGIVYVWSVGHSGFSRSGGDGSDREAPVTDEAEAPGGLDVLKLLRLSPHRRFRDHTADVIDLSWNKENFLLSASIDKTVRLWHTARSECLHVYPHVDCVTAVDFHPKIDHLFLSGNFDKKLRVWNVTDGRVKEWANTPDMITAACFSPEGSMAVAGLYRGQVFFYQTEGMKYYTQVECRNRHGALKGGKKVTGLCYDTSSHTVAAAFPPSSSGGATTPGPRLQGAPSTSGGHSSSFPVSSGPVSAPGPTPHSVTGAGCEQLLITTNDSRLRLYQTEDYSMLCKYKGLTNDHMQIKASFSEDGKYVISGSENGQIYIWKGTTPQHGHAGGLAGLSAPLTFKKDRNTAYEFFPSTEIGGINPPIVSVALFVPANAVWHAMKGTSYEEEALNAGPGLPISKMIISADYSGKIRVFQRHVLTKEKTDRNTGSHFNKKA
Sbjct:    1 MNGKGAPDEPMNIEQMRFQVVDKDTGQIFRIDEMEQHININAYTLFPSRDELAQKLASSAVQAGDSDDETPTSPKSGLSLTGLSALSSMLGFPKKKDVHRQDPVEGLVRVSTVRKEGPDFGDLKLSQCLQAHDGPIWTMKFSIGGEFLASAGQSGIVYVWSVGHSGFSRSGGDGSDREAPVTDEAEAPGGLDVLKLLRLSPHRRFRDHTADVIDLSWNKENFLLSASIDKTVRLWHTARSECLHVYPHVDCVTAVDFHPKIDHLFLSGNFDKKLRVWNVTDGRVKEWANTPDMITAACFSPEGSMAVAGLYRGQVFFYQTEGMKYYTQVECRNRHGALKGGKKVTGLCYDTSSHTVAAAFPPSSSGGATTPGPRLQGAPSTSGGHSSSFPVSSGPVSAPGPTPHSVTGAGCEQLLITTNDSRLRLYQTEDYSMLCKYKGLTNDHMQIKASFSEDGKYVISGSENGQIYIWKGTTPQHGHAGGLAGLSAPLTFKKDRNTAYEFFPSTEIGGINPPIVSVALFVPANAVWHAMKGTSYEEEALNAGPGLPISKMIISADYSGKIRVFQRHVLTKEKTDRNTGSHFNKKA 587          
BLAST of EWM29709.1 vs. NCBI_GenBank
Match: gi|813149803|ref|XP_012200548.1| (hypothetical protein SPRG_20020 [Saprolegnia parasitica CBS 223.65] >gi|641534887|gb|KDO28817.1| hypothetical protein SPRG_20020 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 315.464 bits (807), Expect = 4.721e-97
Identity = 198/555 (35.68%), Postives = 278/555 (50.09%), Query Frame = 0
Query:   18 FQVVDKDTGQIFRIDEMEQHININAYTLFPSRDELAQKLASSAVQAGDSDDETPTSPKSGLSLTGLSALSSMLGFPKKKDVHRQDPVEGLVRVSTVRKEGPDFGDLKLSQCLQAHDGPIWTMKFSIGGEFLASAGQSGIVYVWSVGHSGFSRSGGDGSDREAPVTDEAEAPGGLDVLKLLRLSPHRRFRDHTADVIDLSWNKENFLLSASIDKTVRLWHTARSECLHVYPHVDCVTAVDFHPKIDHLFLSGNFDKKLRVWNVTDGRVKEWANTPDMITAACFSPEGSMAVAGLYRGQVFFYQT---EGMKYYTQVECRNRHGALKGGKKVTGLCYDTSSHTVAAAFPPSSSGGATTPGPRLQGAPSTSGGHSSSFPVSSGPVSAPGPTPHSVTGAGCEQLLITTNDSRLRLYQTEDYSMLCKYKGLTNDHMQIKASFSEDGKYVISGSENGQIYIW-KGTTPQHGHAGGLAGLSAPLTFKKDRNTAYEFFPSTEIGGINPPIVSVALFVPANAVWHA-MKGTSYEEEALNAGPGLPISKMIISADYSGKIRVFQR 567
            F V +KDTG+++ I E+E H  ++ YT+FP   E     A    +    ++++ TS K+ L +T             K+   +  P+ G V V +  K+  +F  L ++Q +  H G IWTMKFS  G  L + GQ  I+ VW V   G    G D      P               L   +P + ++ H+  ++D+SW++ NF+LSAS+DKTVRLWH ++ ECLHV+ H D V AVDFHPK D  FLSG FD K R+WN+ DG V  +  TP MITAA F P GS  + GL  GQ   YQ    + M YYTQ++CRN                               + GAT  G ++ G   T  G                           +  L+TTNDSR+RL+  ++Y+ +CKYKGL N+++QIK  FS+DG YVI GSE G +YIW K     HG AG L G       K+DRN ++E+F + E       +V+VALF PA+    A +  T ++   + A  G      +++A Y G I+VF R
Sbjct:   86 FVVRNKDTGEVYDIRELEAH-PVDCYTMFPQNFE--PPAADDESEPHIHEEKSKTSIKARLRMT--------FKKKDKQSKAKAKPMAGAVHVGSSTKDKREFSALTVAQTITCHHGTIWTMKFSHDGARLVTGGQDAILRVWKVHALG----GADAETSPRP---------------LFVETPEQSYQGHSMPIVDVSWSRSNFILSASMDKTVRLWHISKEECLHVFQHPDSVPAVDFHPKDDRFFLSGCFDNKARIWNIPDGCVVSYVQTPVMITAATFHPSGSRVIVGLLHGQCILYQVNNHQAMNYYTQIDCRN-------------------------------ARGATRKGRKVTGIEFTPEG---------------------------KFFLVTTNDSRMRLFSVDNYARVCKYKGLRNEYLQIKGRFSQDGDYVICGSETGNVYIWHKANASAHG-AGLLGG-------KQDRNQSFEYFTAVEGAS---GVVTVALFAPASTFALAPLPTTDHDNVHVQACTGY-----MVTATYDGAIKVFTR 536          
BLAST of EWM29709.1 vs. NCBI_GenBank
Match: gi|953490769|emb|CEG46423.1| (WD40 repeat-containing protein [Plasmopara halstedii])

HSP 1 Score: 311.997 bits (798), Expect = 6.475e-96
Identity = 204/560 (36.43%), Postives = 289/560 (51.61%), Query Frame = 0
Query:   17 RFQVVDKDTGQIFRIDEMEQHININAYTLFPSRDELAQKLASSAVQAGDSDDETPTSPKSGLSLTGLSALSSMLGFPKKKDVHRQDPVE-GLVRVSTVRKEGPDFGDLKLSQCLQAHDGPIWTMKFSIGGEFLASAGQSGIVYVWSVGHSGFSRSGGDGSDREAPVTDEAEAPGGLDVLKLLRLSPHRRFRDHTADVIDLSWNKENFLLSASIDKTVRLWHTARSECLHVYPHVDCVTAVDFHPKIDHLFLSGNFDKKLRVWNVTDGRVKEWANTPDMITAACFSPEGSMAVAGLYRGQVFFYQT---EGMKYYTQVECRNRHGALKGGKKVTGLCYDTSSHTVAAAFPPSSSGGATTPGPRLQGAPSTSGGHSSSFPVSSGPVSAPGPTPHSVTGAGCEQLLITTNDSRLRLYQTEDYSMLCKYKGLTNDHMQIKASFSEDGKYVISGSENGQIYIWKGTTPQHGHAGGLAGLSAPLTFKKDRNTAYEFFPSTEIGGINPP--IVSVALFVPANAVWHAMKGTSYE---EEALNAGPGLPISKMIISADYSGKIRVFQR 567
            ++ V +KDTG++F I ++   +  N+Y++FP+ D LA +           +++   +     SLT +     M  FP K  V  ++P++   V V++ +KE  +F D+ L+Q +  H G IWT+KFS  G  L S GQ  ++ VW V  S         SD +A +  E+      D  ++L   P R ++ HT  ++D+SW++ NF+LSAS+DKT+RLWH +R +CLHV+ H D V AVDFHPK D  FLSG FD K RVW++ DG V  +  TP MITAA F+P G+ AV GL  GQ  FYQ    + M YYTQ+ECRN  G+++ G+KVTG+ +D          P       +T   R+                                     +L    N SR+           CKYKGL N H+QIK  FS+DG +VI GSENG +Y+W         A  L  +S   + K DRN++YE F + +     PP  IV+VALF PA+    AM  +  E   +   NA  GL     I+SA Y G I+ F+R
Sbjct:   66 KYIVKNKDTGEVFDIRDLAS-MPANSYSIFPN-DFLAPQ-----------EEDVKRTKSRRPSLTKI-----MSKFPMKSKV--KEPLKRNHVPVTSFKKEKREFEDISLAQTISKHIGTIWTIKFSHDGARLVSGGQDAVLRVWRVQIS---------SDEDAKLAKES------DEKQILDTEPERSYQGHTMPIVDVSWSRSNFILSASMDKTIRLWHISREDCLHVFHHPDSVPAVDFHPKEDRYFLSGCFDNKARVWDIPDGCVVSYVQTPVMITAASFNPSGTRAVVGLLNGQCIFYQVNSHQQMNYYTQIECRNSRGSMRKGRKVTGIEFD----------PEGKYFLVSTNDSRM-------------------------------------RLFSVDNYSRI-----------CKYKGLVNGHLQIKGRFSQDGDFVICGSENGSVYVW-------NKARYLRSMSIVKSSKHDRNSSYESFSAAD-----PPNGIVTVALFAPASTF--AMVKSKLEARDDVNSNACTGL-----IVSASYDGCIKFFER 513          
BLAST of EWM29709.1 vs. NCBI_GenBank
Match: gi|669157830|ref|XP_008614477.1| (hypothetical protein SDRG_10272 [Saprolegnia diclina VS20] >gi|530733833|gb|EQC32075.1| hypothetical protein SDRG_10272 [Saprolegnia diclina VS20])

HSP 1 Score: 311.612 bits (797), Expect = 1.553e-95
Identity = 198/555 (35.68%), Postives = 277/555 (49.91%), Query Frame = 0
Query:   18 FQVVDKDTGQIFRIDEMEQHININAYTLFPSRDELAQKLASSAVQAGDSDDETPTSPKSGLSLTGLSA-LSSMLGFPKKKDVHRQDPVEGLVRVSTVRKEGPDFGDLKLSQCLQAHDGPIWTMKFSIGGEFLASAGQSGIVYVWSVGHSGFSRSGGDGSDREAPVTDEAEAPGGLDVLKLLRLSPHRRFRDHTADVIDLSWNKENFLLSASIDKTVRLWHTARSECLHVYPHVDCVTAVDFHPKIDHLFLSGNFDKKLRVWNVTDGRVKEWANTPDMITAACFSPEGSMAVAGLYRGQVFFYQT---EGMKYYTQVECRNRHGALKGGKKVTGLCYDTSSHTVAAAFPPSSSGGATTPGPRLQGAPSTSGGHSSSFPVSSGPVSAPGPTPHSVTGAGCEQLLITTNDSRLRLYQTEDYSMLCKYKGLTNDHMQIKASFSEDGKYVISGSENGQIYIWKGTTPQHGHAGGLAGLSAPLTFKKDRNTAYEFFPSTEIGGINPPIVSVALFVPANAVWHA-MKGTSYEEEALNAGPGLPISKMIISADYSGKIRVFQR 567
            F V +KDTG+++ I E+E H  ++ YT+FP   E              +DDE+    +   + T + A L        K+   +  P+ G V   +  K+  +F  L + Q +  H G IWTMKFS  G  L + GQ  I+ VW V   G       G+D E        AP  L        +P + ++ H+  ++D+SW++ NF+LSAS+DKTVRLWH ++ ECLHV+ H D V AVDFHPK D  FLSG FD K R+WN+ DG V  +   P MITAA F P GS  + GL  GQ   YQ    + M YYTQ++CRN                               + GAT  G ++ G   T  G                           +  L+TTNDSR+RL+  ++Y+ +CKYKGL N+++QIK  FS+DG YVI GSENG +YIW   T    H+  L G       K+DRN ++E+F  T + G +  +V+VALF PA+    A +  T ++   + A  G      +++A Y G IRVF R
Sbjct:   86 FVVRNKDTGEVYDIRELEAH-PVDCYTMFPQNFEPP------------ADDESEPHIQEEKAKTSIKARLRMTFKKKDKQPKAKAKPMAGAVHGGSSTKDKREFSALTVVQTITCHHGTIWTMKFSHDGARLVTGGQDAILRVWKVHALG-------GADAET-------APRAL-----FLETPDQSYQGHSMPIVDVSWSRSNFILSASMDKTVRLWHISKEECLHVFQHPDSVPAVDFHPKDDRFFLSGCFDNKARIWNIPDGCVVSYVQAPVMITAATFHPSGSRVIVGLLHGQCILYQVNNHQAMNYYTQIDCRN-------------------------------ARGATRKGRKVTGIEFTPEG---------------------------KFFLVTTNDSRMRLFSVDNYARVCKYKGLRNEYLQIKGRFSQDGDYVICGSENGNVYIWHKAT-SSAHSSSLLGS------KQDRNQSFEYF--TAVDGAS-GVVTVALFAPASTFALAPLPTTDHDNVHVQACTGY-----MVTATYDGAIRVFTR 535          
BLAST of EWM29709.1 vs. NCBI_GenBank
Match: gi|675204561|ref|XP_008911165.1| (hypothetical protein PPTG_15645 [Phytophthora parasitica INRA-310] >gi|566015166|gb|ETI38077.1| hypothetical protein F443_16090 [Phytophthora parasitica P1569] >gi|567952625|gb|ETK78297.1| hypothetical protein L915_15635 [Phytophthora parasitica] >gi|567981284|gb|ETL31727.1| hypothetical protein L916_15531 [Phytophthora parasitica] >gi|568040676|gb|ETM38124.1| hypothetical protein L914_15486 [Phytophthora parasitica] >gi|568088535|gb|ETN03392.1| hypothetical protein PPTG_15645 [Phytophthora parasitica INRA-310] >gi|570318900|gb|ETO66848.1| hypothetical protein F444_16075 [Phytophthora parasitica P1976] >gi|570942705|gb|ETP07962.1| hypothetical protein F441_15919 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 308.145 bits (788), Expect = 3.718e-94
Identity = 203/559 (36.31%), Postives = 283/559 (50.63%), Query Frame = 0
Query:   17 RFQVVDKDTGQIFRIDEMEQHININAYTLFPSRDELAQKLASSAVQAGDSDDETPTSPKSGLSLTGLSALSSMLGFPKKKDVHRQDPVEGLVRVSTVRKEGPDFGDLKLSQCLQAHDGPIWTMKFSIGGEFLASAGQSGIVYVWSVGHSGFSRSGGDGSDREAPVTDEAEAPGGLDVLKLLRLSPHRRFRDHTADVIDLSWNKENFLLSASIDKTVRLWHTARSECLHVYPHVDCVTAVDFHPKIDHLFLSGNFDKKLRVWNVTDGRVKEWANTPDMITAACFSPEGSMAVAGLYRGQVFFYQT---EGMKYYTQVECRNRHGALKGGKKVTGLCYDTSSHTVAAAFPPSSSGGATTPGPRLQGAPSTSGGHSSSFPVSSGPVSAPGPTPHSVTGAGCEQLLITTNDSRLRLYQTEDYSMLCKYKGLTNDHMQIKASFSEDGKYVISGSENGQIYIWKGTTPQHGHAGGLAGLSAPLTFKKDRNTAYEFFPSTEIGGINPP--IVSVALFVPANAVWHAMKGTSYE---EEALNAGPGLPISKMIISADYSGKIRVFQR 567
            ++ V +KDTG++F I ++   +  ++Y++FP+ D +A +           ++E   +     S+T +     M  FP K    ++      V V++ +KE  D  DL L+Q L  H G IWTMKFS  G  L S GQ  I+ VW V  S         S+ +A +  E++    LD        P R ++ HT  ++D+SW++ NF+LSAS+DKTVRLWH +R +CLHV+ H D V AVDFHPK D  FLSG FD K RVW++ DG V  +  TP MITAA F+P G+ A+ GL  GQ  FYQ    + M YYTQ+ECRN  G+++ G+KVTG+ +D          P       +T   R+                                     +L    N SR+  Y           KGL N H+QIK  FS+DG +VI GSENG +Y+W         A  L  +S   + K+DRN++YEFF + E     PP  IV+VALF PA+    AM  +  E   +   NA  GL     I+SA Y G I+ F+R
Sbjct:   91 KYIVKNKDTGEVFDIRDLSS-MPADSYSIFPN-DFVAPQ-----------EEEAKRTRTRRPSITKI-----MAKFPIKSKT-KEPTKRNHVPVTSCKKEKRDLEDLCLAQTLSKHTGTIWTMKFSHDGARLVSGGQDAILRVWKVQIS---------SEEDAKLARESDEKHILDA------EPERSYQGHTMPIVDVSWSRSNFILSASMDKTVRLWHISREDCLHVFHHPDSVPAVDFHPKEDRYFLSGCFDNKARVWDIPDGCVVSYVQTPVMITAASFNPSGTRAIVGLLNGQCIFYQVNSHQQMNYYTQIECRNSRGSMRKGRKVTGIEFD----------PEGKYFLVSTNDSRM-------------------------------------RLFSVDNYSRICKY-----------KGLVNGHLQIKGRFSQDGDFVICGSENGSVYVW-------NKARYLRSMSIVKSSKQDRNSSYEFFTAAE-----PPNGIVTVALFAPASTF--AMVKSKLEASDDVNTNACTGL-----IVSASYDGCIKFFER 538          
BLAST of EWM29709.1 vs. NCBI_GenBank
Match: gi|568010772|gb|ETL84955.1| (hypothetical protein L917_15353 [Phytophthora parasitica])

HSP 1 Score: 307.76 bits (787), Expect = 4.143e-94
Identity = 203/559 (36.31%), Postives = 283/559 (50.63%), Query Frame = 0
Query:   17 RFQVVDKDTGQIFRIDEMEQHININAYTLFPSRDELAQKLASSAVQAGDSDDETPTSPKSGLSLTGLSALSSMLGFPKKKDVHRQDPVEGLVRVSTVRKEGPDFGDLKLSQCLQAHDGPIWTMKFSIGGEFLASAGQSGIVYVWSVGHSGFSRSGGDGSDREAPVTDEAEAPGGLDVLKLLRLSPHRRFRDHTADVIDLSWNKENFLLSASIDKTVRLWHTARSECLHVYPHVDCVTAVDFHPKIDHLFLSGNFDKKLRVWNVTDGRVKEWANTPDMITAACFSPEGSMAVAGLYRGQVFFYQT---EGMKYYTQVECRNRHGALKGGKKVTGLCYDTSSHTVAAAFPPSSSGGATTPGPRLQGAPSTSGGHSSSFPVSSGPVSAPGPTPHSVTGAGCEQLLITTNDSRLRLYQTEDYSMLCKYKGLTNDHMQIKASFSEDGKYVISGSENGQIYIWKGTTPQHGHAGGLAGLSAPLTFKKDRNTAYEFFPSTEIGGINPP--IVSVALFVPANAVWHAMKGTSYE---EEALNAGPGLPISKMIISADYSGKIRVFQR 567
            ++ V +KDTG++F I ++   +  ++Y++FP+ D +A +           ++E   +     S+T +     M  FP K    ++      V V++ +KE  D  DL L+Q L  H G IWTMKFS  G  L S GQ  I+ VW V  S         S+ +A +  E++    LD        P R ++ HT  ++D+SW++ NF+LSAS+DKTVRLWH +R +CLHV+ H D V AVDFHPK D  FLSG FD K RVW++ DG V  +  TP MITAA F+P G+ A+ GL  GQ  FYQ    + M YYTQ+ECRN  G+++ G+KVTG+ +D          P       +T   R+                                     +L    N SR+  Y           KGL N H+QIK  FS+DG +VI GSENG +Y+W         A  L  +S   + K+DRN++YEFF + E     PP  IV+VALF PA+    AM  +  E   +   NA  GL     I+SA Y G I+ F+R
Sbjct:   78 KYIVKNKDTGEVFDIRDLSS-MPADSYSIFPN-DFVAPQ-----------EEEAKRTRTRRPSITKI-----MAKFPIKSKT-KEPTKRNHVPVTSCKKEKRDLEDLCLAQTLSKHTGTIWTMKFSHDGARLVSGGQDAILRVWKVQIS---------SEEDAKLARESDEKHILDA------EPERSYQGHTMPIVDVSWSRSNFILSASMDKTVRLWHISREDCLHVFHHPDSVPAVDFHPKEDRYFLSGCFDNKARVWDIPDGCVVSYVQTPVMITAASFNPSGTRAIVGLLNGQCIFYQVNSHQQMNYYTQIECRNSRGSMRKGRKVTGIEFD----------PEGKYFLVSTNDSRM-------------------------------------RLFSVDNYSRICKY-----------KGLVNGHLQIKGRFSQDGDFVICGSENGSVYVW-------NKARYLRSMSIVKSSKQDRNSSYEFFTAAE-----PPNGIVTVALFAPASTF--AMVKSKLEASDDVNTNACTGL-----IVSASYDGCIKFFER 525          
BLAST of EWM29709.1 vs. NCBI_GenBank
Match: gi|570973346|gb|ETP36007.1| (hypothetical protein F442_15941 [Phytophthora parasitica P10297])

HSP 1 Score: 307.375 bits (786), Expect = 7.674e-94
Identity = 203/559 (36.31%), Postives = 283/559 (50.63%), Query Frame = 0
Query:   17 RFQVVDKDTGQIFRIDEMEQHININAYTLFPSRDELAQKLASSAVQAGDSDDETPTSPKSGLSLTGLSALSSMLGFPKKKDVHRQDPVEGLVRVSTVRKEGPDFGDLKLSQCLQAHDGPIWTMKFSIGGEFLASAGQSGIVYVWSVGHSGFSRSGGDGSDREAPVTDEAEAPGGLDVLKLLRLSPHRRFRDHTADVIDLSWNKENFLLSASIDKTVRLWHTARSECLHVYPHVDCVTAVDFHPKIDHLFLSGNFDKKLRVWNVTDGRVKEWANTPDMITAACFSPEGSMAVAGLYRGQVFFYQT---EGMKYYTQVECRNRHGALKGGKKVTGLCYDTSSHTVAAAFPPSSSGGATTPGPRLQGAPSTSGGHSSSFPVSSGPVSAPGPTPHSVTGAGCEQLLITTNDSRLRLYQTEDYSMLCKYKGLTNDHMQIKASFSEDGKYVISGSENGQIYIWKGTTPQHGHAGGLAGLSAPLTFKKDRNTAYEFFPSTEIGGINPP--IVSVALFVPANAVWHAMKGTSYE---EEALNAGPGLPISKMIISADYSGKIRVFQR 567
            ++ V +KDTG++F I ++   +  ++Y++FP+ D +A +           ++E   +     S+T +     M  FP K    ++      V V++ +KE  D  DL L+Q L  H G IWTMKFS  G  L S GQ  I+ VW V  S         S+ +A +  E++    LD        P R ++ HT  ++D+SW++ NF+LSAS+DKTVRLWH +R +CLHV+ H D V AVDFHPK D  FLSG FD K RVW++ DG V  +  TP MITAA F+P G+ A+ GL  GQ  FYQ    + M YYTQ+ECRN  G+++ G+KVTG+ +D          P       +T   R+                                     +L    N SR+  Y           KGL N H+QIK  FS+DG +VI GSENG +Y+W         A  L  +S   + K+DRN++YEFF + E     PP  IV+VALF PA+    AM  +  E   +   NA  GL     I+SA Y G I+ F+R
Sbjct:   91 KYIVKNKDTGEVFDIRDLSS-MPADSYSIFPN-DFVAPQ-----------EEEAKRTRTRRPSITKI-----MAKFPIKSKT-KEPTKRNHVPVTSCKKEKRDLEDLCLAQTLSKHTGTIWTMKFSHDGARLVSGGQDAILRVWKVQIS---------SEEDAKLARESDEKHILDA------EPERSYQGHTMPIVDVSWSRSNFILSASMDKTVRLWHISREDCLHVFHHPDSVPAVDFHPKEDRYFLSGCFDNKARVWDIPDGCVVSYVQTPVMITAASFNPSGTRAIVGLLNGQCIFYQVNSHQQMNYYTQLECRNSRGSMRKGRKVTGIEFD----------PEGKYFLVSTNDSRM-------------------------------------RLFSVDNYSRICKY-----------KGLVNGHLQIKGRFSQDGDFVICGSENGSVYVW-------NKARYLRSMSIVKSSKQDRNSSYEFFTAAE-----PPNGIVTVALFAPASTF--AMVKSKLEASDDVNTNACTGL-----IVSASYDGCIKFFER 538          
BLAST of EWM29709.1 vs. NCBI_GenBank
Match: gi|1173955248|gb|OQS02252.1| (hypothetical protein THRCLA_05359 [Thraustotheca clavata])

HSP 1 Score: 310.071 bits (793), Expect = 3.636e-92
Identity = 205/557 (36.80%), Postives = 278/557 (49.91%), Query Frame = 0
Query:   18 FQVVDKDTGQIFRIDEMEQHININAYTLFPSRDELAQKLASSAVQAGDSDDETPTSPKSGLSLTGLSALSSMLGFPKKKDVHRQDPVEGLVRVSTVRKEGPDFGDLKLSQCLQAHDGPIWTMKFSIGGEFLASAGQSGIVYVWSVGHSGFSRSGGDGSDREAPVTDEAEAPGGLDVLKLLRLSPHRRFRDHTADVIDLSWNKENFLLSASIDKTVRLWHTARSECLHVYPHVDCVTAVDFHPKIDHLFLSGNFDKKLRVWNVTDGRVKEWANTPDMITAACFSPEGSMAVAGLYRGQVFFYQT---EGMKYYTQVECRNRHGALKGGKKVTGLCYDTSSHTVAAAFPPSSSGGATTPGPRLQGAPSTSGGHSSSFPVSSGPVSAPGPTPHSVTGAGCEQLLITTNDSRLRLYQTEDYSMLCKYKGLTNDHMQIKASFSEDGKYVISGSENGQIYIWKGTTPQHGHAGGLAGLSAPLTFKKDRNTAYEFFPSTEIGGINPP--IVSVALFVPANAVWHAMKGTSYEEEA-LNAGPGLPISKMIISADYSGKIRVFQRH 568
            F V +KDTG+++ I E++ H  ++ YT+FP   E  Q    S  Q    + +T TS K+ L LT          F KK    + +   G V+V    KE  +F  L L Q L  H G IWTMKFS  G  L + GQ  I+ VW V  +       + + +  P               L    P + ++ HT  ++D+SW++ NF+LSAS+DKTVRLWH ++ ECLHV+ H D V AVDFHPK D  FLSG FD K R+WN+ DG V  +  TP MITAA F P GS  V GL  GQ   YQ    + M YYTQ++CRN  GA + G+KVTG+ +                    TP  +              F VS              T     +L    N SR+  Y           KGL N+++QIKA FS+DG++VI GSENG +YIW  +  QH         ++ ++ K+DRN ++EFF + E     PP  +V+VALF PA+    A  G   +++  + A  G      I+SA Y G I+VFQRH
Sbjct:  355 FVVRNKDTGEVYDIRELDAH-PVDCYTIFPQNFEPPQDREDSNEQHIQGE-KTKTSLKARLRLT----------FKKKDKTVKANDNLG-VQVGASNKENREFDSLSLVQTLSKHSGTIWTMKFSHDGARLVTGGQDAILRVWKVNMT-------EKTTQHRP---------------LFLEQPDQSYQGHTMPIVDVSWSRSNFILSASMDKTVRLWHISKEECLHVFQHPDSVPAVDFHPKDDRFFLSGCFDNKARIWNIPDGCVVSYVQTPVMITAATFHPSGSRVVVGLLHGQCILYQVNNHQAMNYYTQIDCRNARGATRKGRKVTGIEF--------------------TPEGKF-------------FLVS--------------TNDSRMRLFSVDNYSRVCKY-----------KGLRNEYLQIKARFSQDGEHVICGSENGNVYIWNRSMAQHS--------TSFMSGKQDRNNSFEFFTAAE-----PPSGVVTVALFAPASTYALAPSGLGPDQDVHVEACTGY-----IVSASYDGCIKVFQRH 800          
BLAST of EWM29709.1 vs. NCBI_GenBank
Match: gi|970658139|gb|KUF95940.1| (WD repeat-containing protein 44 [Phytophthora nicotianae])

HSP 1 Score: 291.197 bits (744), Expect = 5.424e-88
Identity = 190/554 (34.30%), Postives = 271/554 (48.92%), Query Frame = 0
Query:   17 RFQVVDKDTGQIFRIDEMEQHININAYTLFPSRDELAQKLASSAVQAGDSDDETPTSPKSGLSLTGLSALSSMLGFPKKKDVHRQDPVEGLVRVSTVRKEGPDFGDLKLSQCLQAHDGPIWTMKFSIGGEFLASAGQSGIVYVWSVGHSGFSRSGGDGSDREAPVTDEAEAPGGLDVLKLLRLSPHRRFRDHTADVIDLSWNKENFLLSASIDKTVRLWHTARSECLHVYPHVDCVTAVDFHPKIDHLFLSGNFDKKLRVWNVTDGRVKEWANTPDMITAACFSPEGSMAVAGLYRGQVFFYQT---EGMKYYTQVECRNRHGALKGGKKVTGLCYDTSSHTVAAAFPPSSSGGATTPGPRLQGAPSTSGGHSSSFPVSSGPVSAPGPTPHSVTGAGCEQLLITTNDSRLRLYQTEDYSMLCKYKGLTNDHMQIKASFSEDGKYVISGSENGQIYIWKGTTPQHGHAGGLAGLSAPLTFKKDRNTAYEFFPSTEIGGINPPIVSVALFVPANAVWHAMKGTSYEEEALNAGPGLPISKMIISADYSGKIRVFQR 567
            ++ V +KDTG++F I ++   +  ++Y++FP+ D +A +           ++E   +     S+T +     M  FP K    ++      V V++ +KE  D  DL L+Q L  H G IWTMKFS  G  L S GQ  I+ VW V  S         S+ +A +  E++    LD        P R ++ HT  ++D+SW++ NF+LSAS+DKTVRLWH +R +CLHV+ H D V AVDFHPK D  FLSG FD K RVW++ DG V  +  TP MITAA F+P G+ A+ GL  GQ  FYQ    + M YYTQ+ECRN  G+++ G+KVTG+ +D          P       +T   R+                                     +L    N SR+  Y           KGL N H+QIK  FS+DG +VI GSENG +Y+W         A  L  +S   + K+DRN++YEFF ++    +                    K  + ++   NA  GL     I+SA Y G I+ F+R
Sbjct:   78 KYIVKNKDTGEVFDIRDLSS-MPADSYSIFPN-DFVAPQ-----------EEEAKRTRTRRPSITKI-----MAKFPIKSKT-KEPTKRNHVPVTSCKKEKRDLEDLCLAQTLSKHTGTIWTMKFSHDGARLVSGGQDAILRVWKVQIS---------SEEDAKLARESDEKHILDA------EPERSYQGHTMPIVDVSWSRSNFILSASMDKTVRLWHISREDCLHVFHHPDSVPAVDFHPKEDRYFLSGCFDNKARVWDIPDGCVVSYVQTPVMITAASFNPSGTRAIVGLLNGQCIFYQVNSHQQMNYYTQIECRNSRGSMRKGRKVTGIEFD----------PEGKYFLVSTNDSRM-------------------------------------RLFSVDNYSRICKY-----------KGLVNGHLQIKGRFSQDGDFVICGSENGSVYVW-------NKARYLRSMSIVKSSKQDRNSSYEFFTASTFAMVKS------------------KLEASDDVNTNACTGL-----IVSASYDGCIKFFER 509          
BLAST of EWM29709.1 vs. NCBI_GenBank
Match: gi|673029672|ref|XP_008868797.1| (hypothetical protein H310_05759 [Aphanomyces invadans] >gi|574475192|gb|ETW02192.1| hypothetical protein H310_05759 [Aphanomyces invadans])

HSP 1 Score: 292.738 bits (748), Expect = 1.271e-87
Identity = 204/564 (36.17%), Postives = 277/564 (49.11%), Query Frame = 0
Query:   18 FQVVDKDTGQIFRIDEMEQHININAYTLFPSRDE--LAQKLASSAVQAGDSDDET---PTSPKSGLSLTGLSALSSMLGFPKKKDVHRQDPVEGLVRV---STVRKEGPDFGDLKLSQCLQAHDGPIWTMKFSIGGEFLASAGQSGIVYVWSVGHSGFSRSGGDGSDREAPVTDEAEAPGGLDVLKLLRLSPHRRFRDHTADVIDLSWNKENFLLSASIDKTVRLWHTARSECLHVYPHVDCVTAVDFHPKIDHLFLSGNFDKKLRVWNVTDGRVKEWANTPDMITAACFSPEGSMAVAGLYRGQVFFYQT---EGMKYYTQVECRNRHGALKGGKKVTGLCYDTSSHTVAAAFPPSSSGGATTPGPRLQGAPSTSGGHSSSFPVSSGPVSAPGPTPHSVTGAGCEQLLITTNDSRLRLYQTEDYSMLCKYKGLTNDHMQIKASFSEDGKYVISGSENGQIYIWKGTTPQHGHAGGLAGLSAPLTFKKDRNTAYEFFPSTEIGGINPPIVSVALFVPANAVWHAMKGTSYEEEALNAGP---GLPISKMIISADYSGKIRVFQR 567
            F V +KDTG++F I E++    ++ YT+FP   E  L   L   ++ A D D  +    T  K      G SALS   GF  K+      P +G   V   S+ +K+  +F  +   Q L+ H G IWTMKFS  G  L S GQ  I+ VW V       S   G +  +P T     P       LL  +P + +  HT  ++D+SW++ NF+LSAS+DKTVRLWH ++ +CLHV+ H D V AVDFHPK D  FLSG FD K R+WN+ DG V  +  TP MITAA F P G+  VAGL  GQ   YQ    + M YYTQ+ECRN  GA + G+KVTG+            F P                          F VS              T     +L    N SR+  Y+           GL N+++QIK  FS+DG YVI GSEN Q+YIW  +     H+  +      L  K DRN A+E F +++  G    +V+VALF PA+       GT   +++  A     G   +  I++A Y+G I+V++R
Sbjct:   99 FVVRNKDTGEVFDIRELDTK-PVDCYTMFPQNFEPHLRDSLNGDSI-ARDRDSSSGSLETDKKPTDKQQGRSALS---GFHFKRKEKVPPPPDGKTYVHVSSSSKKDKREFDCVAEMQTLRQHHGTIWTMKFSHDGARLVSGGQDAILRVWKVDACAKLPSTPRGIE-ASPSTAGTSMPSS-QRPHLLEGTPEQMYNGHTMPIVDVSWSRSNFILSASMDKTVRLWHISKPDCLHVFQHPDSVPAVDFHPKDDRFFLSGCFDNKARIWNIPDGCVVSYVQTPVMITAASFHPSGNRIVAGLLNGQCILYQVSAHQAMNYYTQIECRNARGATRKGRKVTGI-----------EFSP----------------------EGKYFLVS--------------TNDSRMRLFSVDNYSRVCKYK-----------GLVNNYLQIKGRFSQDGDYVICGSENAQVYIWNKSA---AHSSSML-----LGHKHDRNNAFESFSASDTTG---GVVTVALFAPASTYALVNHGTDLVDKSGRAADDVHGKACTGYIVTASYNGCIKVYER 586          
The following BLAST results are available for this feature:
BLAST of EWM29709.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112287|gb|EWM29709.1|0.000e+0100.00wd repeat protein [Nannochloropsis gaditana][more]
gi|813149803|ref|XP_012200548.1|4.721e-9735.68hypothetical protein SPRG_20020 [Saprolegnia paras... [more]
gi|953490769|emb|CEG46423.1|6.475e-9636.43WD40 repeat-containing protein [Plasmopara halsted... [more]
gi|669157830|ref|XP_008614477.1|1.553e-9535.68hypothetical protein SDRG_10272 [Saprolegnia dicli... [more]
gi|675204561|ref|XP_008911165.1|3.718e-9436.31hypothetical protein PPTG_15645 [Phytophthora para... [more]
gi|568010772|gb|ETL84955.1|4.143e-9436.31hypothetical protein L917_15353 [Phytophthora para... [more]
gi|570973346|gb|ETP36007.1|7.674e-9436.31hypothetical protein F442_15941 [Phytophthora para... [more]
gi|1173955248|gb|OQS02252.1|3.636e-9236.80hypothetical protein THRCLA_05359 [Thraustotheca c... [more]
gi|970658139|gb|KUF95940.1|5.424e-8834.30WD repeat-containing protein 44 [Phytophthora nico... [more]
gi|673029672|ref|XP_008868797.1|1.271e-8736.17hypothetical protein H310_05759 [Aphanomyces invad... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna956rna956Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications