EWM21120.1, cds9555 (CDS) Nannochloropsis gaditana

Overview
NameEWM21120.1
Unique Namecds9555
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037254.1:233513..234802 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21120.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100041g26.3690.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:233513..234802 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR016040NAD(P)-bd_dom
Homology
BLAST of EWM21120.1 vs. NCBI_GenBank
Match: gi|585101187|gb|EWM21120.1| (hypothetical protein Naga_100041g26 [Nannochloropsis gaditana])

HSP 1 Score: 864.374 bits (2232), Expect = 0.000e+0
Identity = 429/429 (100.00%), Postives = 429/429 (100.00%), Query Frame = 0
Query:    1 MKLGQTLAFAFIVCLQMAWSFAFLRLDLCRQPASPPSSVARRRALSFSFGGRDRCQYFMSTDNDNSVSSDSEPSPNSSPFPDDRPLNSVEQRRVTRAAKTDKARKLSKNARLMDDFFGKRLGQGSVFYGERLSDLDDEEYARKVEASNDNDERLEVRALRDNPVLVVGATGKTGQWVVTDLLSKGFSVRAFVRNLDKAEDLFGWDGSNLDVFEGNVKDLASLTEATRGALAVIYCAGSREIIGPNAFQQVDGLGVENAVKAAQLSGGEEPGSEPSVRKFILLSSIGVSRPEEYGFLGKLLGDPLRAKARGEAAVRRSGLESYCIVRGGGLRDGDGTKRAIEIAQGDVFGKCGVSRLDLAQVLVQVLVQDVNNVTFEVKNDDSRREDQARLNEILSTADQRQIVEYFLREDAKEEEMWARRLQALKPDII 429
            MKLGQTLAFAFIVCLQMAWSFAFLRLDLCRQPASPPSSVARRRALSFSFGGRDRCQYFMSTDNDNSVSSDSEPSPNSSPFPDDRPLNSVEQRRVTRAAKTDKARKLSKNARLMDDFFGKRLGQGSVFYGERLSDLDDEEYARKVEASNDNDERLEVRALRDNPVLVVGATGKTGQWVVTDLLSKGFSVRAFVRNLDKAEDLFGWDGSNLDVFEGNVKDLASLTEATRGALAVIYCAGSREIIGPNAFQQVDGLGVENAVKAAQLSGGEEPGSEPSVRKFILLSSIGVSRPEEYGFLGKLLGDPLRAKARGEAAVRRSGLESYCIVRGGGLRDGDGTKRAIEIAQGDVFGKCGVSRLDLAQVLVQVLVQDVNNVTFEVKNDDSRREDQARLNEILSTADQRQIVEYFLREDAKEEEMWARRLQALKPDII
Sbjct:    1 MKLGQTLAFAFIVCLQMAWSFAFLRLDLCRQPASPPSSVARRRALSFSFGGRDRCQYFMSTDNDNSVSSDSEPSPNSSPFPDDRPLNSVEQRRVTRAAKTDKARKLSKNARLMDDFFGKRLGQGSVFYGERLSDLDDEEYARKVEASNDNDERLEVRALRDNPVLVVGATGKTGQWVVTDLLSKGFSVRAFVRNLDKAEDLFGWDGSNLDVFEGNVKDLASLTEATRGALAVIYCAGSREIIGPNAFQQVDGLGVENAVKAAQLSGGEEPGSEPSVRKFILLSSIGVSRPEEYGFLGKLLGDPLRAKARGEAAVRRSGLESYCIVRGGGLRDGDGTKRAIEIAQGDVFGKCGVSRLDLAQVLVQVLVQDVNNVTFEVKNDDSRREDQARLNEILSTADQRQIVEYFLREDAKEEEMWARRLQALKPDII 429          
BLAST of EWM21120.1 vs. NCBI_GenBank
Match: gi|551674528|ref|XP_005840019.1| (hypothetical protein GUITHDRAFT_101482 [Guillardia theta CCMP2712] >gi|428184183|gb|EKX53039.1| hypothetical protein GUITHDRAFT_101482 [Guillardia theta CCMP2712])

HSP 1 Score: 130.183 bits (326), Expect = 3.399e-30
Identity = 86/268 (32.09%), Postives = 139/268 (51.87%), Query Frame = 0
Query:  112 LMDDFFGKRLGQGSVFYGERLSDLDDEEYARKVEASNDNDERLEVRALRDNPVLVVGATGKTGQWVVTDLLSKGFSVRAFVRNLDKAEDLFGWDGSNLDVFEGNVKDLASLTEATRGALAVIYCAGSREIIGPNAFQQVDGLGVENAVKAAQLSGGEEPGSEPSVRKFILLSSIGVSRPEEYGFLGKLLGDPLRAKARGEAAVRRSGLESYCIVRGGGLRDGDGTKRAIEI---AQGDVFGKCGVSRLDLAQVLVQVLVQDVNNVTFE 376
            L++D   KR G G +FYGER +  + +  A   EA    ++ +  R +R + VLV+G+   TGQW+    + +G + R   +  DKAED FG DG+NLD++ G+V D A L  A  G  AVIYC       G  +F+++   GVE  V+ A+          P+VR+ +L+SS G          G      L A+  GEA + ++GL SY I+R G + +  G  + I +   +  ++  K  ++  D+A V +  L+  +++V F+
Sbjct:   76 LIEDLTMKRFGNGWIFYGERETTKNKDYDALAKEA----EDLVNQRVIRPDAVLVIGSLSVTGQWMTLKTMEQGLNARILTKEFDKAEDCFGTDGANLDIYYGDVFDDAQLENAMEGIKAVIYCDSGSLPFGETSFERLSKQGVERVVEMAK--------RMPNVRRMVLISSAG----------GVFSNQQLEAQRAGEALLEKAGL-SYLIIRAGKMENKLGGMKNIAVSPCSAQEMPTKATITPADVADVAITALM--IDDVVFK 318          
BLAST of EWM21120.1 vs. NCBI_GenBank
Match: gi|973147593|gb|KUK90221.1| (hypothetical protein XE04_1546 [Marinimicrobia bacterium 46_43])

HSP 1 Score: 107.842 bits (268), Expect = 2.055e-23
Identity = 83/228 (36.40%), Postives = 126/228 (55.26%), Query Frame = 0
Query:  164 VLVVGATGKTGQWVVTDLLSKGFSVRAFVRNLDKAEDLFGWDGSNLDVFEGNVKDLASLTEATRGALAVIYCAGSREIIGPNAFQQVDGLGVENAVKAAQLSGGEEPGSEPSVRKFILLSSIGVSRPEE-YGFLGKLLGDPLRAKARGEAAVRRSGLESYCIVRGGGLRDGDGTKRAIEIAQGDVFGKCGVSRLDLAQVLVQVL-VQDVNNVTFE-VKNDDSRREDQA 388
            +L+ GATG+TG+ +V  L+ +G   R  +R+    E+LFG   S++    G+V+ + SL  A  G   VI   GSR  +G N  ++VD  GV N V+ A  +G         VR+FIL+SSI V+  +      GK+L      K +GE  +R SGL+ Y I+R GGL+D DG K+++ + QGD      +SR D+A + +  L   D   +TFE V++DD   ++ A
Sbjct:    5 ILIAGATGQTGRIIVQKLIDRGDRPRVLIRDQALVENLFG---SHVQAMIGDVRQIESLLPAMDGIDTVISAIGSRTPVGKNCPKRVDYQGVANLVQTALDAG---------VRRFILISSISVTNLQHPMNCFGKILA----YKLKGEDILRESGLD-YLIIRPGGLKDTDGGKKSLILDQGDRIAGT-ISRSDVAALCLFALDYPDELRLTFEAVESDDESPQNLA 214          
BLAST of EWM21120.1 vs. NCBI_GenBank
Match: gi|662568671|gb|KER09808.1| (NAD-dependent epimerase [Chlorobium sp. GBChlB])

HSP 1 Score: 105.916 bits (263), Expect = 7.840e-23
Identity = 80/232 (34.48%), Postives = 119/232 (51.29%), Query Frame = 0
Query:  161 DNPVLVVGATGKTGQWVVTDLLSKGFSVRAFVRNLDKAEDLFGWDGSNLDVFEGNVKDLASLTEATRGALAVIYCAGSREIIGPNAFQQVDGLGVENAVKAAQLSGGEEPGSEPSVRKFILLSSIGVSRP-EEYGFLGKLLGDPLRAKARGEAAVRRSGLESYCIVRGGGLRDGDGTKRAIEIAQGDVFGKCGVSRLDLAQV-LVQVLVQDVNNVTFEVKNDDSRREDQARL 390
            +  VLV GATG+TG WVV  LL  G   + F R+  K  +       NL+V+ G +++ +++  A +G  AVI   G+ E+IG  +  QVDG GV   V AA  +G         V+KFIL+SSI V++P       G +L   LRA+         +G  +Y I+R GGL+DGD  K  ++  +GD      + R D+ ++  + + +    N TFEV    +  EDQ  L
Sbjct:    7 NETVLVAGATGRTGLWVVRRLLHYGIKTKTFSRSAAKLSEF-----KNLEVWLGKIQNSSAVAAAVQGCDAVISALGATELIGDASPAQVDGDGVIRLVDAAADAG---------VKKFILISSIAVTKPFHPLNLFGGVLSQKLRAENHIRKIFSENG-RTYTIIRPGGLKDGDPFKFKLQFDKGDKITGL-IDRSDVGEIAALSLWIPKATNQTFEVIR--TVAEDQKTL 220          
BLAST of EWM21120.1 vs. NCBI_GenBank
Match: gi|873231581|emb|CEM07838.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 108.227 bits (269), Expect = 2.833e-22
Identity = 102/337 (30.27%), Postives = 165/337 (48.96%), Query Frame = 0
Query:  110 ARLMDDFFGKRLGQGSVFYGERLSDLDDEEYARKVEASNDNDERL-EVRALRDNPVLVVGAT--GKTGQWVVTDLLSKGFSVRAFV--RNLDKAEDLFGWDGSNLDVFEGNVKDLASLTEATRGALAVIYCAGSREIIGPNAFQQVDGLGVENAVKAAQLSGGEEPGSEPSVRKFILLSSIGVSRPEE--YGFLGKLLGDPLRAKARGEAAVRRSGLE-SYCIVRGGGLRDGDGT----------KRAIEIAQ-GDVFGKCGVSRLDLAQVLVQVLVQDVNNVTFEVKNDDSRREDQARLNEILSTADQRQIVEYFLREDAKEEEMWARRLQALKPD 427
            +RL DDF  KRLGQG  +YG+R SD+  EE+       +  +  L E + L  + VL+V +   G+     V+ L ++GF+VR  V   ++ + E  +G DG  +DV EG+  D+    EA  G+ A++Y + ++       +       V    +AA+ SGG  P    +V+KF+L+SS  V+   +        LLG+P   K + E  +R SG    Y I+R    +D               R I +AQ G + G  GVSR+D+A+ +VQ L++ +  VTF   N  + R  +   +E +S +     +  F RE    +E+W   L+ ++ D
Sbjct:   66 SRLWDDFLNKRLGQGEQYYGKRTSDMSQEEFLSTQWTKSQTELALEEEKPLLPDAVLLVASEPDGELCTATVSLLRNRGFNVRLLVPTSDMQRIEKRYGGDGDYIDVMEGDAVDVEDAIEAAMGSQALVYLSENQPGQANREYAA-----VAALRQAAEASGG--PSGPATVKKFVLISSASVASGNQGVGAAFNALLGNPTGWKLKAENELRGSGSALPYVILRPTSFQDEQTNAYARANMAWLTRDILVAQEGPLGGLPGVSRIDVAEAVVQTLMRPLAGVTFSFTNGPNIRMPKT-FDESISASG----LSAFERE---ADELWGDLLRGVRTD 387          
BLAST of EWM21120.1 vs. NCBI_GenBank
Match: gi|1071378614|ref|WP_069810820.1| (NAD(P)-dependent oxidoreductase [Chlorobaculum limnaeum] >gi|1070920216|gb|AOS84628.1| NAD-dependent epimerase [Chlorobaculum limnaeum])

HSP 1 Score: 103.99 bits (258), Expect = 4.388e-22
Identity = 80/218 (36.70%), Postives = 112/218 (51.38%), Query Frame = 0
Query:  164 VLVVGATGKTGQWVVTDLLSKGFSVRAFVRNLDKAEDLFGWDGSNLDVFEGNVKDLASLTEATRGALAVIYCAGSREIIGPNAFQQVDGLGVENAVKAAQLSGGEEPGSEPSVRKFILLSSIGVSRPEEYGFLGKLLGDPLRAKARGEAAVRR---SGLESYCIVRGGGLRDGDGTKRAIEIAQGDVFGKCGVSRLDLAQVLVQVL-VQDVNNVTFEV 377
            VLV GATGKTG WVV  LL  G  VR FVR+ +KA  +F   G  ++V  G ++D  S+  A  G  AVI   GS  + G  +  +VD  G    +  A  +G         VR F ++SSI V++   Y  L  L G  L  K   E  +R+   S   ++ I+R GGLRDG+  +  + + QGD      ++R D+A++ V  L V+   N TFEV
Sbjct:   11 VLVAGATGKTGSWVVRRLLHHGVPVRVFVRSEEKARSMF---GDAVEVAIGKIQDAESIARAVSGCDAVISALGSSSVSGEASPSEVDRDGAIRLMDEAAKAG---------VRHFAMVSSIAVTK--WYHPL-NLFGGVLSMKHAAEEHLRKIFASEGRTHTIIRPGGLRDGEPLQHRLHVEQGDHLWNGWMNRSDVAELAVLSLWVEKAANKTFEV 213          
BLAST of EWM21120.1 vs. NCBI_GenBank
Match: gi|499236180|ref|WP_010933720.1| (NAD(P)-dependent oxidoreductase [Chlorobaculum tepidum] >gi|21674875|ref|NP_662940.1| hypothetical protein CT2065 [Chlorobium tepidum TLS] >gi|21648099|gb|AAM73282.1| conserved hypothetical protein [Chlorobium tepidum TLS])

HSP 1 Score: 102.834 bits (255), Expect = 1.235e-21
Identity = 79/218 (36.24%), Postives = 110/218 (50.46%), Query Frame = 0
Query:  164 VLVVGATGKTGQWVVTDLLSKGFSVRAFVRNLDKAEDLFGWDGSNLDVFEGNVKDLASLTEATRGALAVIYCAGSREIIGPNAFQQVDGLGVENAVKAAQLSGGEEPGSEPSVRKFILLSSIGVSRPEEYGFLGKLLGDPLRAKARGEAAVRR---SGLESYCIVRGGGLRDGDGTKRAIEIAQGDVFGKCGVSRLDLAQVLVQVL-VQDVNNVTFEV 377
            VLV GATGKTG WVV  LL  G  VR FVR  +KA  LF   G  ++V  G ++D  ++  A  G  AVI   GS  + G  +  +VD  G    +  A  +G         VR F ++SSI V++   +     L G  L  K   E  +R+   S   SY ++R GGLRDG+  +  + + QGD      ++R D+A++ V  L V+   N TFEV
Sbjct:   11 VLVAGATGKTGSWVVKRLLHYGVPVRVFVRCEEKARRLF---GEGVEVVTGKIQDAEAIRRAVSGCDAVISALGSSAMSGEASPSEVDRDGAIRLIDEAAKAG---------VRHFAMVSSIAVTK---WFHPLNLFGGVLSMKLAAEEHLRKIFGSEGRSYTVIRPGGLRDGEPLQHRLHVEQGDHLWNGWMNRSDVAELAVLSLWVEKAANKTFEV 213          
BLAST of EWM21120.1 vs. NCBI_GenBank
Match: gi|255085941|ref|XP_002508937.1| (predicted protein, partial [Micromonas commoda] >gi|226524215|gb|ACO70195.1| predicted protein, partial [Micromonas commoda])

HSP 1 Score: 102.064 bits (253), Expect = 1.558e-21
Identity = 79/224 (35.27%), Postives = 112/224 (50.00%), Query Frame = 0
Query:  164 VLVVGATGKTGQWVVTDLLSKGFSVRAFVRNLDKAEDLFGWDGSNLDVFEGNVKDLASL--TEATRGALAVIYCAGSREIIGP-----NAFQQVDGLGVENAVKAAQLSGGEEPGSEPSVRKFILLSSIGVSRPEEYGFLGKLLGDPLRAKARGEAAVRRSGLESYCIVRGGGLRDG--------------DGTKRAIEIAQGDVFGKCGVSRLDLAQVLVQVL 366
            VLVVG+TG  GQ VV  LL  G+ VRA  RN+D A  LFG    NL++   +++D  +L  +E   G  AV+ C G+           N  +Q D +G+ N V A +          PS ++F+L+SSIGV R  +  F+   L   L+ K  GE A+  SG+  Y ++R G L DG               GT+RA++IA+GD       SR+ +A   V  L
Sbjct:    1 VLVVGSTGGVGQLVVAKLLDAGYVVRAVSRNVDAARGLFGSQ-PNLELRVADLRDADALDASEICVGVDAVVSCTGTTAFPSARWKDDNGPEQTDFVGIRNLVNATR-------AQSPSCKRFVLVSSIGVERTNQMPFVILNLFGVLKHKRAGELALESSGIP-YTVLRPGRLTDGPYTSYDINTLLKATSGTRRAVDIAEGDTLTPEETSRIVVADCAVAAL 215          
BLAST of EWM21120.1 vs. NCBI_GenBank
Match: gi|1140941136|ref|WP_076788984.1| (NAD-dependent epimerase [Chlorobium sp. KB01])

HSP 1 Score: 102.064 bits (253), Expect = 2.295e-21
Identity = 90/236 (38.14%), Postives = 122/236 (51.69%), Query Frame = 0
Query:  164 VLVVGATGKTGQWVVTDLLSKGFSVRAFVRNLDKAEDLFGWDGSNLDVFEGNVKDLASLTEATRGALAVIYCAGSREIIGPNAFQQVDGLGVENAVKAAQLSGGEEPGSEPSVRKFILLSSIGVSRPEEYGFLGKLLGDPLRAKARGEAAVRR--SGLE-SYCIVRGGGLRDGDGTKRAIEIAQGDVFGKCGVSRLDLAQVLVQVL-VQDVNNVTFEVKNDDSRREDQARLNEILS 395
            VLV GATG+TGQWVV  LL  G SVR F R+ DKA  LF   G N++   G ++  + +  A +G  AVI   GS    G ++  +VD  GV   V  A  +G         VR F L+SS+ V+R   Y  L    G  L+ K   E  VR+  SG++ S+ IVR GGL+DG+     + +  GD      ++R D+A++LV  L V+   N TFEV N+    E Q  L    S
Sbjct:   11 VLVAGATGRTGQWVVKRLLHYGVSVRVFCRDRDKAVSLF---GDNVECVSGVIQSASDIAVAVKGCSAVISALGSGSYSGESSPAEVDRDGVMRLVDEAAKAG---------VRHFALVSSLAVTR--WYHPLNLFAGVLLK-KWDAEEHVRKVFSGVDRSFTIVRPGGLKDGEPLLHRLHVDTGDRLWSGWINRSDVAELLVLSLWVEKAKNKTFEVINES--EESQHSLEPFYS 229          
BLAST of EWM21120.1 vs. NCBI_GenBank
Match: gi|499682008|ref|WP_011362742.1| (NAD(P)-dependent oxidoreductase [Chlorobium chlorochromatii] >gi|78171884|gb|ABB28980.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3])

HSP 1 Score: 102.064 bits (253), Expect = 2.456e-21
Identity = 81/237 (34.18%), Postives = 116/237 (48.95%), Query Frame = 0
Query:  164 VLVVGATGKTGQWVVTDLLSKGFSVRAFVRNLDKAEDLFGWDGSNLDVFEGNVKDLASLTEATRGALAVIYCAGSREIIGPNAFQQVDGLGVENAVKAAQLSGGEEPGSEPSVRKFILLSSIGVSRPEEYGFLGKLLGDPLRAKARGEAAVRR---SGLESYCIVRGGGLRDGDGTKRAIEIAQGDVFGKCGVSRLDLAQVLV-QVLVQDVNNVTFEVKNDDSRREDQARLNEILST 396
            VLV GATGKTGQWVV  L   G +VR F R+  KAE +FG D   +++  G ++D   +  A  G  AVI   GS    G ++  +VD  G+   V AA  +G         V  F L+SS+ V++   +     L    L  K   E  +R+   +   SY IVR GGL+DG+  +  + +  GD      V+R D+A++LV  +      N TFEV ++  + E Q  L     T
Sbjct:   12 VLVAGATGKTGQWVVKRLQHYGIAVRVFSRDPQKAETIFGKD---VEIIVGKIQDTNDVARAVTGCSAVISALGSNAFSGESSPAEVDRDGIMRLVDAAVAAG---------VTHFGLVSSLAVTK---WFHPLNLFAGVLTKKWEAEEHLRKHFSAPNRSYTIVRPGGLKDGEPLQHKLHVDTGDNLWNGFVNRADVAELLVISLFTPKAKNKTFEVISE--KEELQTSLAHYYDT 231          
The following BLAST results are available for this feature:
BLAST of EWM21120.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Position :
0
Zoom :
x 1
01SequenceEWM21120.1XP_005840019.1KUK90221.1KER09808.1CEM07838.1WP_069810820.1WP_010933720.1XP_002508937.1WP_076788984.1WP_011362742.1
Match NameE-valueIdentityDescription
gi|585101187|gb|EWM21120.1|0.000e+0100.00hypothetical protein Naga_100041g26 [Nannochlorops... [more]
gi|551674528|ref|XP_005840019.1|3.399e-3032.09hypothetical protein GUITHDRAFT_101482 [Guillardia... [more]
gi|973147593|gb|KUK90221.1|2.055e-2336.40hypothetical protein XE04_1546 [Marinimicrobia bac... [more]
gi|662568671|gb|KER09808.1|7.840e-2334.48NAD-dependent epimerase [Chlorobium sp. GBChlB][more]
gi|873231581|emb|CEM07838.1|2.833e-2230.27unnamed protein product [Vitrella brassicaformis C... [more]
gi|1071378614|ref|WP_069810820.1|4.388e-2236.70NAD(P)-dependent oxidoreductase [Chlorobaculum lim... [more]
gi|499236180|ref|WP_010933720.1|1.235e-2136.24NAD(P)-dependent oxidoreductase [Chlorobaculum tep... [more]
gi|255085941|ref|XP_002508937.1|1.558e-2135.27predicted protein, partial [Micromonas commoda] >g... [more]
gi|1140941136|ref|WP_076788984.1|2.295e-2138.14NAD-dependent epimerase [Chlorobium sp. KB01][more]
gi|499682008|ref|WP_011362742.1|2.456e-2134.18NAD(P)-dependent oxidoreductase [Chlorobium chloro... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9586rna9586Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications