EWM21120.1, cds9555 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21120.1 vs. NCBI_GenBank
Match: gi|585101187|gb|EWM21120.1| (hypothetical protein Naga_100041g26 [Nannochloropsis gaditana]) HSP 1 Score: 864.374 bits (2232), Expect = 0.000e+0 Identity = 429/429 (100.00%), Postives = 429/429 (100.00%), Query Frame = 0 Query: 1 MKLGQTLAFAFIVCLQMAWSFAFLRLDLCRQPASPPSSVARRRALSFSFGGRDRCQYFMSTDNDNSVSSDSEPSPNSSPFPDDRPLNSVEQRRVTRAAKTDKARKLSKNARLMDDFFGKRLGQGSVFYGERLSDLDDEEYARKVEASNDNDERLEVRALRDNPVLVVGATGKTGQWVVTDLLSKGFSVRAFVRNLDKAEDLFGWDGSNLDVFEGNVKDLASLTEATRGALAVIYCAGSREIIGPNAFQQVDGLGVENAVKAAQLSGGEEPGSEPSVRKFILLSSIGVSRPEEYGFLGKLLGDPLRAKARGEAAVRRSGLESYCIVRGGGLRDGDGTKRAIEIAQGDVFGKCGVSRLDLAQVLVQVLVQDVNNVTFEVKNDDSRREDQARLNEILSTADQRQIVEYFLREDAKEEEMWARRLQALKPDII 429 MKLGQTLAFAFIVCLQMAWSFAFLRLDLCRQPASPPSSVARRRALSFSFGGRDRCQYFMSTDNDNSVSSDSEPSPNSSPFPDDRPLNSVEQRRVTRAAKTDKARKLSKNARLMDDFFGKRLGQGSVFYGERLSDLDDEEYARKVEASNDNDERLEVRALRDNPVLVVGATGKTGQWVVTDLLSKGFSVRAFVRNLDKAEDLFGWDGSNLDVFEGNVKDLASLTEATRGALAVIYCAGSREIIGPNAFQQVDGLGVENAVKAAQLSGGEEPGSEPSVRKFILLSSIGVSRPEEYGFLGKLLGDPLRAKARGEAAVRRSGLESYCIVRGGGLRDGDGTKRAIEIAQGDVFGKCGVSRLDLAQVLVQVLVQDVNNVTFEVKNDDSRREDQARLNEILSTADQRQIVEYFLREDAKEEEMWARRLQALKPDII Sbjct: 1 MKLGQTLAFAFIVCLQMAWSFAFLRLDLCRQPASPPSSVARRRALSFSFGGRDRCQYFMSTDNDNSVSSDSEPSPNSSPFPDDRPLNSVEQRRVTRAAKTDKARKLSKNARLMDDFFGKRLGQGSVFYGERLSDLDDEEYARKVEASNDNDERLEVRALRDNPVLVVGATGKTGQWVVTDLLSKGFSVRAFVRNLDKAEDLFGWDGSNLDVFEGNVKDLASLTEATRGALAVIYCAGSREIIGPNAFQQVDGLGVENAVKAAQLSGGEEPGSEPSVRKFILLSSIGVSRPEEYGFLGKLLGDPLRAKARGEAAVRRSGLESYCIVRGGGLRDGDGTKRAIEIAQGDVFGKCGVSRLDLAQVLVQVLVQDVNNVTFEVKNDDSRREDQARLNEILSTADQRQIVEYFLREDAKEEEMWARRLQALKPDII 429
BLAST of EWM21120.1 vs. NCBI_GenBank
Match: gi|551674528|ref|XP_005840019.1| (hypothetical protein GUITHDRAFT_101482 [Guillardia theta CCMP2712] >gi|428184183|gb|EKX53039.1| hypothetical protein GUITHDRAFT_101482 [Guillardia theta CCMP2712]) HSP 1 Score: 130.183 bits (326), Expect = 3.399e-30 Identity = 86/268 (32.09%), Postives = 139/268 (51.87%), Query Frame = 0 Query: 112 LMDDFFGKRLGQGSVFYGERLSDLDDEEYARKVEASNDNDERLEVRALRDNPVLVVGATGKTGQWVVTDLLSKGFSVRAFVRNLDKAEDLFGWDGSNLDVFEGNVKDLASLTEATRGALAVIYCAGSREIIGPNAFQQVDGLGVENAVKAAQLSGGEEPGSEPSVRKFILLSSIGVSRPEEYGFLGKLLGDPLRAKARGEAAVRRSGLESYCIVRGGGLRDGDGTKRAIEI---AQGDVFGKCGVSRLDLAQVLVQVLVQDVNNVTFE 376 L++D KR G G +FYGER + + + A EA ++ + R +R + VLV+G+ TGQW+ + +G + R + DKAED FG DG+NLD++ G+V D A L A G AVIYC G +F+++ GVE V+ A+ P+VR+ +L+SS G G L A+ GEA + ++GL SY I+R G + + G + I + + ++ K ++ D+A V + L+ +++V F+ Sbjct: 76 LIEDLTMKRFGNGWIFYGERETTKNKDYDALAKEA----EDLVNQRVIRPDAVLVIGSLSVTGQWMTLKTMEQGLNARILTKEFDKAEDCFGTDGANLDIYYGDVFDDAQLENAMEGIKAVIYCDSGSLPFGETSFERLSKQGVERVVEMAK--------RMPNVRRMVLISSAG----------GVFSNQQLEAQRAGEALLEKAGL-SYLIIRAGKMENKLGGMKNIAVSPCSAQEMPTKATITPADVADVAITALM--IDDVVFK 318
BLAST of EWM21120.1 vs. NCBI_GenBank
Match: gi|973147593|gb|KUK90221.1| (hypothetical protein XE04_1546 [Marinimicrobia bacterium 46_43]) HSP 1 Score: 107.842 bits (268), Expect = 2.055e-23 Identity = 83/228 (36.40%), Postives = 126/228 (55.26%), Query Frame = 0 Query: 164 VLVVGATGKTGQWVVTDLLSKGFSVRAFVRNLDKAEDLFGWDGSNLDVFEGNVKDLASLTEATRGALAVIYCAGSREIIGPNAFQQVDGLGVENAVKAAQLSGGEEPGSEPSVRKFILLSSIGVSRPEE-YGFLGKLLGDPLRAKARGEAAVRRSGLESYCIVRGGGLRDGDGTKRAIEIAQGDVFGKCGVSRLDLAQVLVQVL-VQDVNNVTFE-VKNDDSRREDQA 388 +L+ GATG+TG+ +V L+ +G R +R+ E+LFG S++ G+V+ + SL A G VI GSR +G N ++VD GV N V+ A +G VR+FIL+SSI V+ + GK+L K +GE +R SGL+ Y I+R GGL+D DG K+++ + QGD +SR D+A + + L D +TFE V++DD ++ A Sbjct: 5 ILIAGATGQTGRIIVQKLIDRGDRPRVLIRDQALVENLFG---SHVQAMIGDVRQIESLLPAMDGIDTVISAIGSRTPVGKNCPKRVDYQGVANLVQTALDAG---------VRRFILISSISVTNLQHPMNCFGKILA----YKLKGEDILRESGLD-YLIIRPGGLKDTDGGKKSLILDQGDRIAGT-ISRSDVAALCLFALDYPDELRLTFEAVESDDESPQNLA 214
BLAST of EWM21120.1 vs. NCBI_GenBank
Match: gi|662568671|gb|KER09808.1| (NAD-dependent epimerase [Chlorobium sp. GBChlB]) HSP 1 Score: 105.916 bits (263), Expect = 7.840e-23 Identity = 80/232 (34.48%), Postives = 119/232 (51.29%), Query Frame = 0 Query: 161 DNPVLVVGATGKTGQWVVTDLLSKGFSVRAFVRNLDKAEDLFGWDGSNLDVFEGNVKDLASLTEATRGALAVIYCAGSREIIGPNAFQQVDGLGVENAVKAAQLSGGEEPGSEPSVRKFILLSSIGVSRP-EEYGFLGKLLGDPLRAKARGEAAVRRSGLESYCIVRGGGLRDGDGTKRAIEIAQGDVFGKCGVSRLDLAQV-LVQVLVQDVNNVTFEVKNDDSRREDQARL 390 + VLV GATG+TG WVV LL G + F R+ K + NL+V+ G +++ +++ A +G AVI G+ E+IG + QVDG GV V AA +G V+KFIL+SSI V++P G +L LRA+ +G +Y I+R GGL+DGD K ++ +GD + R D+ ++ + + + N TFEV + EDQ L Sbjct: 7 NETVLVAGATGRTGLWVVRRLLHYGIKTKTFSRSAAKLSEF-----KNLEVWLGKIQNSSAVAAAVQGCDAVISALGATELIGDASPAQVDGDGVIRLVDAAADAG---------VKKFILISSIAVTKPFHPLNLFGGVLSQKLRAENHIRKIFSENG-RTYTIIRPGGLKDGDPFKFKLQFDKGDKITGL-IDRSDVGEIAALSLWIPKATNQTFEVIR--TVAEDQKTL 220
BLAST of EWM21120.1 vs. NCBI_GenBank
Match: gi|873231581|emb|CEM07838.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 108.227 bits (269), Expect = 2.833e-22 Identity = 102/337 (30.27%), Postives = 165/337 (48.96%), Query Frame = 0 Query: 110 ARLMDDFFGKRLGQGSVFYGERLSDLDDEEYARKVEASNDNDERL-EVRALRDNPVLVVGAT--GKTGQWVVTDLLSKGFSVRAFV--RNLDKAEDLFGWDGSNLDVFEGNVKDLASLTEATRGALAVIYCAGSREIIGPNAFQQVDGLGVENAVKAAQLSGGEEPGSEPSVRKFILLSSIGVSRPEE--YGFLGKLLGDPLRAKARGEAAVRRSGLE-SYCIVRGGGLRDGDGT----------KRAIEIAQ-GDVFGKCGVSRLDLAQVLVQVLVQDVNNVTFEVKNDDSRREDQARLNEILSTADQRQIVEYFLREDAKEEEMWARRLQALKPD 427 +RL DDF KRLGQG +YG+R SD+ EE+ + + L E + L + VL+V + G+ V+ L ++GF+VR V ++ + E +G DG +DV EG+ D+ EA G+ A++Y + ++ + V +AA+ SGG P +V+KF+L+SS V+ + LLG+P K + E +R SG Y I+R +D R I +AQ G + G GVSR+D+A+ +VQ L++ + VTF N + R + +E +S + + F RE +E+W L+ ++ D Sbjct: 66 SRLWDDFLNKRLGQGEQYYGKRTSDMSQEEFLSTQWTKSQTELALEEEKPLLPDAVLLVASEPDGELCTATVSLLRNRGFNVRLLVPTSDMQRIEKRYGGDGDYIDVMEGDAVDVEDAIEAAMGSQALVYLSENQPGQANREYAA-----VAALRQAAEASGG--PSGPATVKKFVLISSASVASGNQGVGAAFNALLGNPTGWKLKAENELRGSGSALPYVILRPTSFQDEQTNAYARANMAWLTRDILVAQEGPLGGLPGVSRIDVAEAVVQTLMRPLAGVTFSFTNGPNIRMPKT-FDESISASG----LSAFERE---ADELWGDLLRGVRTD 387
BLAST of EWM21120.1 vs. NCBI_GenBank
Match: gi|1071378614|ref|WP_069810820.1| (NAD(P)-dependent oxidoreductase [Chlorobaculum limnaeum] >gi|1070920216|gb|AOS84628.1| NAD-dependent epimerase [Chlorobaculum limnaeum]) HSP 1 Score: 103.99 bits (258), Expect = 4.388e-22 Identity = 80/218 (36.70%), Postives = 112/218 (51.38%), Query Frame = 0 Query: 164 VLVVGATGKTGQWVVTDLLSKGFSVRAFVRNLDKAEDLFGWDGSNLDVFEGNVKDLASLTEATRGALAVIYCAGSREIIGPNAFQQVDGLGVENAVKAAQLSGGEEPGSEPSVRKFILLSSIGVSRPEEYGFLGKLLGDPLRAKARGEAAVRR---SGLESYCIVRGGGLRDGDGTKRAIEIAQGDVFGKCGVSRLDLAQVLVQVL-VQDVNNVTFEV 377 VLV GATGKTG WVV LL G VR FVR+ +KA +F G ++V G ++D S+ A G AVI GS + G + +VD G + A +G VR F ++SSI V++ Y L L G L K E +R+ S ++ I+R GGLRDG+ + + + QGD ++R D+A++ V L V+ N TFEV Sbjct: 11 VLVAGATGKTGSWVVRRLLHHGVPVRVFVRSEEKARSMF---GDAVEVAIGKIQDAESIARAVSGCDAVISALGSSSVSGEASPSEVDRDGAIRLMDEAAKAG---------VRHFAMVSSIAVTK--WYHPL-NLFGGVLSMKHAAEEHLRKIFASEGRTHTIIRPGGLRDGEPLQHRLHVEQGDHLWNGWMNRSDVAELAVLSLWVEKAANKTFEV 213
BLAST of EWM21120.1 vs. NCBI_GenBank
Match: gi|499236180|ref|WP_010933720.1| (NAD(P)-dependent oxidoreductase [Chlorobaculum tepidum] >gi|21674875|ref|NP_662940.1| hypothetical protein CT2065 [Chlorobium tepidum TLS] >gi|21648099|gb|AAM73282.1| conserved hypothetical protein [Chlorobium tepidum TLS]) HSP 1 Score: 102.834 bits (255), Expect = 1.235e-21 Identity = 79/218 (36.24%), Postives = 110/218 (50.46%), Query Frame = 0 Query: 164 VLVVGATGKTGQWVVTDLLSKGFSVRAFVRNLDKAEDLFGWDGSNLDVFEGNVKDLASLTEATRGALAVIYCAGSREIIGPNAFQQVDGLGVENAVKAAQLSGGEEPGSEPSVRKFILLSSIGVSRPEEYGFLGKLLGDPLRAKARGEAAVRR---SGLESYCIVRGGGLRDGDGTKRAIEIAQGDVFGKCGVSRLDLAQVLVQVL-VQDVNNVTFEV 377 VLV GATGKTG WVV LL G VR FVR +KA LF G ++V G ++D ++ A G AVI GS + G + +VD G + A +G VR F ++SSI V++ + L G L K E +R+ S SY ++R GGLRDG+ + + + QGD ++R D+A++ V L V+ N TFEV Sbjct: 11 VLVAGATGKTGSWVVKRLLHYGVPVRVFVRCEEKARRLF---GEGVEVVTGKIQDAEAIRRAVSGCDAVISALGSSAMSGEASPSEVDRDGAIRLIDEAAKAG---------VRHFAMVSSIAVTK---WFHPLNLFGGVLSMKLAAEEHLRKIFGSEGRSYTVIRPGGLRDGEPLQHRLHVEQGDHLWNGWMNRSDVAELAVLSLWVEKAANKTFEV 213
BLAST of EWM21120.1 vs. NCBI_GenBank
Match: gi|255085941|ref|XP_002508937.1| (predicted protein, partial [Micromonas commoda] >gi|226524215|gb|ACO70195.1| predicted protein, partial [Micromonas commoda]) HSP 1 Score: 102.064 bits (253), Expect = 1.558e-21 Identity = 79/224 (35.27%), Postives = 112/224 (50.00%), Query Frame = 0 Query: 164 VLVVGATGKTGQWVVTDLLSKGFSVRAFVRNLDKAEDLFGWDGSNLDVFEGNVKDLASL--TEATRGALAVIYCAGSREIIGP-----NAFQQVDGLGVENAVKAAQLSGGEEPGSEPSVRKFILLSSIGVSRPEEYGFLGKLLGDPLRAKARGEAAVRRSGLESYCIVRGGGLRDG--------------DGTKRAIEIAQGDVFGKCGVSRLDLAQVLVQVL 366 VLVVG+TG GQ VV LL G+ VRA RN+D A LFG NL++ +++D +L +E G AV+ C G+ N +Q D +G+ N V A + PS ++F+L+SSIGV R + F+ L L+ K GE A+ SG+ Y ++R G L DG GT+RA++IA+GD SR+ +A V L Sbjct: 1 VLVVGSTGGVGQLVVAKLLDAGYVVRAVSRNVDAARGLFGSQ-PNLELRVADLRDADALDASEICVGVDAVVSCTGTTAFPSARWKDDNGPEQTDFVGIRNLVNATR-------AQSPSCKRFVLVSSIGVERTNQMPFVILNLFGVLKHKRAGELALESSGIP-YTVLRPGRLTDGPYTSYDINTLLKATSGTRRAVDIAEGDTLTPEETSRIVVADCAVAAL 215
BLAST of EWM21120.1 vs. NCBI_GenBank
Match: gi|1140941136|ref|WP_076788984.1| (NAD-dependent epimerase [Chlorobium sp. KB01]) HSP 1 Score: 102.064 bits (253), Expect = 2.295e-21 Identity = 90/236 (38.14%), Postives = 122/236 (51.69%), Query Frame = 0 Query: 164 VLVVGATGKTGQWVVTDLLSKGFSVRAFVRNLDKAEDLFGWDGSNLDVFEGNVKDLASLTEATRGALAVIYCAGSREIIGPNAFQQVDGLGVENAVKAAQLSGGEEPGSEPSVRKFILLSSIGVSRPEEYGFLGKLLGDPLRAKARGEAAVRR--SGLE-SYCIVRGGGLRDGDGTKRAIEIAQGDVFGKCGVSRLDLAQVLVQVL-VQDVNNVTFEVKNDDSRREDQARLNEILS 395 VLV GATG+TGQWVV LL G SVR F R+ DKA LF G N++ G ++ + + A +G AVI GS G ++ +VD GV V A +G VR F L+SS+ V+R Y L G L+ K E VR+ SG++ S+ IVR GGL+DG+ + + GD ++R D+A++LV L V+ N TFEV N+ E Q L S Sbjct: 11 VLVAGATGRTGQWVVKRLLHYGVSVRVFCRDRDKAVSLF---GDNVECVSGVIQSASDIAVAVKGCSAVISALGSGSYSGESSPAEVDRDGVMRLVDEAAKAG---------VRHFALVSSLAVTR--WYHPLNLFAGVLLK-KWDAEEHVRKVFSGVDRSFTIVRPGGLKDGEPLLHRLHVDTGDRLWSGWINRSDVAELLVLSLWVEKAKNKTFEVINES--EESQHSLEPFYS 229
BLAST of EWM21120.1 vs. NCBI_GenBank
Match: gi|499682008|ref|WP_011362742.1| (NAD(P)-dependent oxidoreductase [Chlorobium chlorochromatii] >gi|78171884|gb|ABB28980.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3]) HSP 1 Score: 102.064 bits (253), Expect = 2.456e-21 Identity = 81/237 (34.18%), Postives = 116/237 (48.95%), Query Frame = 0 Query: 164 VLVVGATGKTGQWVVTDLLSKGFSVRAFVRNLDKAEDLFGWDGSNLDVFEGNVKDLASLTEATRGALAVIYCAGSREIIGPNAFQQVDGLGVENAVKAAQLSGGEEPGSEPSVRKFILLSSIGVSRPEEYGFLGKLLGDPLRAKARGEAAVRR---SGLESYCIVRGGGLRDGDGTKRAIEIAQGDVFGKCGVSRLDLAQVLV-QVLVQDVNNVTFEVKNDDSRREDQARLNEILST 396 VLV GATGKTGQWVV L G +VR F R+ KAE +FG D +++ G ++D + A G AVI GS G ++ +VD G+ V AA +G V F L+SS+ V++ + L L K E +R+ + SY IVR GGL+DG+ + + + GD V+R D+A++LV + N TFEV ++ + E Q L T Sbjct: 12 VLVAGATGKTGQWVVKRLQHYGIAVRVFSRDPQKAETIFGKD---VEIIVGKIQDTNDVARAVTGCSAVISALGSNAFSGESSPAEVDRDGIMRLVDAAVAAG---------VTHFGLVSSLAVTK---WFHPLNLFAGVLTKKWEAEEHLRKHFSAPNRSYTIVRPGGLKDGEPLQHKLHVDTGDNLWNGFVNRADVAELLVISLFTPKAKNKTFEVISE--KEELQTSLAHYYDT 231 The following BLAST results are available for this feature:
BLAST of EWM21120.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10 Position : 0 Zoom : x 1
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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