EWM21124.1, cds9537 (CDS) Nannochloropsis gaditana

Overview
NameEWM21124.1
Unique Namecds9537
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037254.1:191853..192569 +
Alignment locationKK037254.1:192678..192722 +
Alignment locationKK037254.1:192824..192996 +
Alignment locationKK037254.1:193115..193275 +
Alignment locationKK037254.1:193432..193619 +
Alignment locationKK037254.1:193717..193920 +
Alignment locationKK037254.1:194073..194259 +
Alignment locationKK037254.1:194334..194538 +
Alignment locationKK037254.1:194597..194802 +
Alignment locationKK037254.1:194856..194920 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21124.1
Productcellulase 2
Orig transcript idgnl|cribi|Naga_100041g8.3694.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:191853..192569 +
KK037254.1supercontigKK037254.1:192678..192722 +
KK037254.1supercontigKK037254.1:192824..192996 +
KK037254.1supercontigKK037254.1:193115..193275 +
KK037254.1supercontigKK037254.1:193432..193619 +
KK037254.1supercontigKK037254.1:193717..193920 +
KK037254.1supercontigKK037254.1:194073..194259 +
KK037254.1supercontigKK037254.1:194334..194538 +
KK037254.1supercontigKK037254.1:194597..194802 +
KK037254.1supercontigKK037254.1:194856..194920 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR017853Glycoside_hydrolase_SF
IPR013781Glyco_hydro_catalytic_dom
IPR001547Glyco_hydro_5
Homology
BLAST of EWM21124.1 vs. NCBI_GenBank
Match: gi|585101191|gb|EWM21124.1| (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 1478.38 bits (3826), Expect = 0.000e+0
Identity = 716/716 (100.00%), Postives = 716/716 (100.00%), Query Frame = 0
Query:    1 MPSRALLMRSSILCINAAIACLVTSIYAQLEPQYVPAASSESVTCYPADALAWRSIPGKIVLHGAPFVKTHHKKVPPAQPSEPIVTDPSGGGGAAGGIRPGGGVTPEPQPKPINGVKPPQPPVTAPPAQVAQPIVPFPGAAGPGVPGPQGGVPGGAGRPLPNMDPFRPPELKPAVRHLQTQEAAKAGGDQKVAGAVVGGVAIENGSGTAREEDDLDEEDKAAIARESMYASIQLKGLNWFGLDRINIFEGTNYKTIDQVMAFFVAHNINALRLPFSLAFALTPMDHEEAEAGGGQGELQYPDRGKISPEYIGLTSWEIIDLLFEKAKENGILILLDMHTLDPDKGVSRLWYDPAKYSEATVLWGWERILSRYVHHWNLFGLDIMNECHDHASWGKGDPMTDFNRYVERFILFVHERVPSYRGLFFVEGIFLNAMGRDQSPWPYWWGGNLFGADKYPIDVKIAALNDRIVYAPHIYGPDVSNMFYFNDWSFPNNLKNVWDNQFGWLIKSTRKALVVGEWGGSCNNKDGIVQEHLAQWMIDNCFQSNFWWALNPGSADTDGLMSQDWSHFDERKMALLGKVQPNPSKFTYEKATDMVCVRHGAPPNPQCADDLAHILKTPDTQQDQDNGGWRKRAPIDGCESNKPWRAGCAEGLAEYRGGWWLSIDRGVGGGRSRSSLLLQQGGIQGRNEDPDRLKEWPARHMLQTHECSSAYRKAKD 716
            MPSRALLMRSSILCINAAIACLVTSIYAQLEPQYVPAASSESVTCYPADALAWRSIPGKIVLHGAPFVKTHHKKVPPAQPSEPIVTDPSGGGGAAGGIRPGGGVTPEPQPKPINGVKPPQPPVTAPPAQVAQPIVPFPGAAGPGVPGPQGGVPGGAGRPLPNMDPFRPPELKPAVRHLQTQEAAKAGGDQKVAGAVVGGVAIENGSGTAREEDDLDEEDKAAIARESMYASIQLKGLNWFGLDRINIFEGTNYKTIDQVMAFFVAHNINALRLPFSLAFALTPMDHEEAEAGGGQGELQYPDRGKISPEYIGLTSWEIIDLLFEKAKENGILILLDMHTLDPDKGVSRLWYDPAKYSEATVLWGWERILSRYVHHWNLFGLDIMNECHDHASWGKGDPMTDFNRYVERFILFVHERVPSYRGLFFVEGIFLNAMGRDQSPWPYWWGGNLFGADKYPIDVKIAALNDRIVYAPHIYGPDVSNMFYFNDWSFPNNLKNVWDNQFGWLIKSTRKALVVGEWGGSCNNKDGIVQEHLAQWMIDNCFQSNFWWALNPGSADTDGLMSQDWSHFDERKMALLGKVQPNPSKFTYEKATDMVCVRHGAPPNPQCADDLAHILKTPDTQQDQDNGGWRKRAPIDGCESNKPWRAGCAEGLAEYRGGWWLSIDRGVGGGRSRSSLLLQQGGIQGRNEDPDRLKEWPARHMLQTHECSSAYRKAKD
Sbjct:    1 MPSRALLMRSSILCINAAIACLVTSIYAQLEPQYVPAASSESVTCYPADALAWRSIPGKIVLHGAPFVKTHHKKVPPAQPSEPIVTDPSGGGGAAGGIRPGGGVTPEPQPKPINGVKPPQPPVTAPPAQVAQPIVPFPGAAGPGVPGPQGGVPGGAGRPLPNMDPFRPPELKPAVRHLQTQEAAKAGGDQKVAGAVVGGVAIENGSGTAREEDDLDEEDKAAIARESMYASIQLKGLNWFGLDRINIFEGTNYKTIDQVMAFFVAHNINALRLPFSLAFALTPMDHEEAEAGGGQGELQYPDRGKISPEYIGLTSWEIIDLLFEKAKENGILILLDMHTLDPDKGVSRLWYDPAKYSEATVLWGWERILSRYVHHWNLFGLDIMNECHDHASWGKGDPMTDFNRYVERFILFVHERVPSYRGLFFVEGIFLNAMGRDQSPWPYWWGGNLFGADKYPIDVKIAALNDRIVYAPHIYGPDVSNMFYFNDWSFPNNLKNVWDNQFGWLIKSTRKALVVGEWGGSCNNKDGIVQEHLAQWMIDNCFQSNFWWALNPGSADTDGLMSQDWSHFDERKMALLGKVQPNPSKFTYEKATDMVCVRHGAPPNPQCADDLAHILKTPDTQQDQDNGGWRKRAPIDGCESNKPWRAGCAEGLAEYRGGWWLSIDRGVGGGRSRSSLLLQQGGIQGRNEDPDRLKEWPARHMLQTHECSSAYRKAKD 716          
BLAST of EWM21124.1 vs. NCBI_GenBank
Match: gi|585108749|gb|EWM26661.1| (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 318.161 bits (814), Expect = 1.784e-97
Identity = 153/381 (40.16%), Postives = 236/381 (61.94%), Query Frame = 0
Query:  230 ASIQLKGLNWFGLD-RINIFEGTNYKTIDQVMAFFVAHNINALRLPFSLAFALTPMDHEEAEAGGGQGELQYPDRGKISPEYIGLTSWEIIDLLFEKAKENGILILLDMHTLDPDKGVSRLWYDPAKYSEATVLWGWERILSRYVHHWNLFGLDIMNECHDHASWGKGDPMTDFNRYVERFILFVHERVPSYRGLFFVEGIFLNAMGRDQSPWPYWWGGNLFGADKYPIDVKIAALNDRIVYAPHIYGPDVSNMFYFN--DWSFPNNLKNVWDNQFGWLIKSTRKALVVGEWGGSCNNKDGIVQEHLAQWMIDNCFQSNFWWALNPGSADTDGLMSQDWSHFDERKMALLGKVQPNPSKFTYEKATDMVCVRHGAPPNPQC 607
            A   +KG++WFG +     F G N+ T+D ++ FF+ H  N +R+P S+AF L P D +  +   G+G      +GK        T WEI+D + ++A   G++++LDMHTL P +  + LWYD  +Y EA +L  W  I++ Y   WN+F LD+ NE H  A+WG   P TD+N++ ER I  +H + P+++GL+ VEG+  N      + +P+WWGGN  GA ++PI V +  + +R+VY+PH+YGPDV +  Y N       N L  VWD+Q GWLI   +K +++GEWGGS   +D IVQ  LA+W++ NC  +N WWA+NP S+DT G+M+ +W  +D+R++ L+  + P+P++F  + +   +C+R G  PNPQC
Sbjct:   90 APFFVKGISWFGCEGHGYTFTGLNFTTVDTILNFFLQHKFNTVRIPVSVAFGLAPKDFKPNQRFVGKGL-----KGK--------TIWEILDEVIDQAALRGLMVMLDMHTLGPQEA-TDLWYD-EQYKEADILQAWSNIMAAYSIKWNVFALDLKNEPHGIATWGVSAPQTDYNKFYERAIAHIHTQFPNWKGLYMVEGVQYNKETDKVTDYPFWWGGNFGGAIQHPIYVPVPEVMNRVVYSPHVYGPDVYDHPYMNVPAAELANELVKVWDSQMGWLIPKLQKGMIIGEWGGSLKGRDEIVQTELAKWLVKNCMANNVWWAINPESSDTGGIMAWNWKTYDKRRLDLVDSIFPDPTQFGIKHSK--LCLRFGTYPNPQC 453          
BLAST of EWM21124.1 vs. NCBI_GenBank
Match: gi|585104020|gb|EWM23139.1| (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 277.715 bits (709), Expect = 1.038e-80
Identity = 159/391 (40.66%), Postives = 225/391 (57.54%), Query Frame = 0
Query:  232 IQLKGLNWFGLD-RINIFEGTNYKTIDQVMAFFVAHNINALRLPFSLAFALTPMDHEEAEAGGGQGELQYPDRGKISPEYIGLTSWEIIDLLFEKAKENGILILLDMHTLDPDKGVSRLWYDPAKYSEATVLWGWERILSRYVHHWNLFGLDIMNECHDHASWGKGDPMTDFNRYVERFILFVHERVPSYRGLFFVEGIFLNAMGRDQSPWPYWWGGNLFGADKYPIDVKIAALNDRIVYAPHIYGPDVS-NMFYFNDWSFPNNLKNVWDNQFGWLIKSTRKALVVGEWGGSC--NNKDGIVQEHLAQWMIDNCFQSNFWWALNPGSADTDGLMSQDWSHFDERKMALLGKVQPNPSKFTYE-KATDMVCVRHGAPPNPQCADDLAHILKT 617
            + LKGLNW+G +  + + +G    + ++ M+F  +H  NALRLPFSL +    +D   A     Q +++            GLT  +++D +F+ A   GILILLD+H +  +KG++ LWYD      A VL  W  +L R+   WNL G+D+ NE H  ASWG G P TD+N +  + I  +  RVP + G+FFVEGI      R  SP  YWWGGNL G  KYPI      L+ R+VY+PHIYGP+V     YF D  FP+N+  +WD+QFGW+ KST +A+V+GEWGGS   + K    Q+ LA+W++  C   NFWW LNP +    GL+++D+   D+  + +L  VQP P+ F     A D +CV  GA  N +CA  +   + T
Sbjct:  191 LYLKGLNWYGFEGELFVLDGLAVWSPERFMSFLASHRFNALRLPFSLEWLARGLDSPLANIYVVQEDMR------------GLTQGQVMDRIFDAAAAQGILILLDLHVISVEKGITDLWYDETA-DGALVLDLWTLLLRRFAGRWNLLGIDLKNEPHGIASWGHGHPKTDWNAFATKSIQTLATRVPDFHGVFFVEGI---ERPRWNSPHAYWWGGNLEGVRKYPISTGSEDLDRRVVYSPHIYGPEVFPRHRYFQDSRFPDNMPGIWDHQFGWIEKSTGRAVVLGEWGGSIVGDRKAAANQQKLAEWLVHACIPDNFWWCLNPATEFNGGLLARDYQAVDKNVLQMLHYVQPKPTTFHGGIGAGDPLCVVDGAFANVRCAVKMGLPIST 565          
BLAST of EWM21124.1 vs. NCBI_GenBank
Match: gi|585108543|gb|EWM26490.1| (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 273.092 bits (697), Expect = 2.364e-80
Identity = 155/391 (39.64%), Postives = 221/391 (56.52%), Query Frame = 0
Query:  232 IQLKGLNWFGLDRIN-IFEGTNYKTIDQVMAFFVAHNINALRLPFSLAFALTPMDHEEAEAGGGQGELQYPDRGKISPEYIGLTSWEIIDLLFEKAKENGILILLDMHTLDPDKGVSRLWYDPAKYSEATVLWGWERILSRYVHHWNLFGLDIMNECHDHASWGKGDPMTDFNRYVERFILFVHERVPSYRGLFFVEGIFL-NAMGRDQSPWPYWWGGNLFGADKYPIDVKIAALNDRIVYAPHIYGPDVSNMFYFNDWSFPNNLKNVWDNQFGWLIKSTRKALVVGEWGGSCNNKDGIVQEHLAQWMIDNCFQSNFWWALNPGSADTDGLMSQDWSHFDERKMALLGKVQPNPSKFTYEKATDMVCVRHGAPPNPQCADDLAHILKTPDT 620
              LKG+++FG +  N +  G    T DQ+  F    + NA+RLPFS A AL P     A                I  E   LT+ E+I  + +KA E GILI+LDMH L+ D  +  LWYD  KYS   V   W+ +L+ +   WNLF +D+ NE H  A+WG G   TD+N   E    +++++ P Y+GL FVEG  L +A          WWGG+L G  ++PID+   ALN R+VY+PH+YGPD     YF   +FP+N+ ++W  Q+ ++ + T +A+VVGEWGG   N+D I Q+  A++++D C +  F+W LNP S DT GL+  D+     +K+ALL KVQP+P+ F   K +D  C+  GA  NP+C  D    L T +T
Sbjct:   85 FHLKGVSYFGFETPNEVPHGLWSVTRDQIFGFLRNESFNAVRLPFSTALALEPNKKVNANT--------------IEKELHDLTALELIGNIIDKAAEYGILIMLDMHRLNED-FIPELWYDD-KYSMDDVKEAWDNLLTAFGDRWNLFAIDLKNEPHGVATWGSGKATTDWNTAAEELATYLYKKHPQYKGLVFVEGTQLASAKHHKLDKNNKWWGGDLEGVQEFPIDLGSDALNKRLVYSPHVYGPDAFVQPYFEAKNFPDNMPDIWKKQWAFVEEQTDRAVVVGEWGGRYENQDKIWQDSFAKFLVDECLEDTFYWCLNPNSGDTGGLLDYDFLTPMPKKLALLAKVQPHPT-FITVKGSDQYCISPGAYANPKC--DKGRRLATSNT 456          
BLAST of EWM21124.1 vs. NCBI_GenBank
Match: gi|585100881|gb|EWM20925.1| (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 261.151 bits (666), Expect = 3.178e-76
Identity = 142/359 (39.55%), Postives = 198/359 (55.15%), Query Frame = 0
Query:  232 IQLKGLNWFGLDR----INIFEGTNYKTIDQVMAFFVAHNINALRLPFSLAFALTPMDHEEAEAGGGQGELQYPDRGKISPEYIGLTSWEIIDLLFEKAKENGILILLDMHTLDPDKGVSRLWYDPAKYSEATVLWGWERILSRYVHHWNLFGLDIMNECHDHASWGKGDPMTDFNRYVERFILFVHERVPSYRGLFFVEGIFLNAMGRDQSPWPYWWGGNLFGADKYPIDVKIAALNDRIVYAPHIYGPDVSNMFYFNDWSFPNNLKNVWDNQFGWLIKSTRKALVVGEWGGSCNNKDGIVQEHLAQWMIDNCFQSNFWWALNPGSADTDGLMSQDWSHFDERKMALLGKVQPNPSKF 586
             ++KG+NWFG +     ++   G   KT+   +     H  NA+RLPFS+  AL  +D    E G  Q +               LTS +I+D L E+A + G++++LD H LDPD+G+S LWYD   Y E  +L  W+ +L+R+  HWN+F LD+ NE H   SWG G+ +TD+    ER I  +    P +RGLFFV GI+                 N     ++P+DV    LN R+VY PH+YGPDV    YF+ WSFP+NL  VWD  +G+L      A+VV EWGG C  KD   QE +A+++ +     NF+W LNP S DT G++  DWS   E+K+ LL  VQP PS+ 
Sbjct:   32 FRIKGINWFGFETPDKCVHGLWGGLSKTLTDYLDLLAFHGFNAIRLPFSVKLALA-LDTTYPEPGFVQADASLSS----------LTSGQIMDKLVEEAGKRGMMVMLDQHRLDPDRGISDLWYDEG-YEEPVILRSWDIMLARFKTHWNVFALDLKNEPHGPCSWGSGEALTDWKAASERIIRHIAAAHPDFRGLFFVSGIWGGGGHWWGG--------NFRRVREHPVDVGSTGLNRRVVYTPHVYGPDVFPQSYFSSWSFPDNLPAVWDLHWGFLSGVLETAVVVSEWGGFCRGKDAKWQERIARYLREKGMADNFYWCLNPNSGDTGGILLDDWSTMHEQKLKLLRDVQPEPSRL 370          
BLAST of EWM21124.1 vs. NCBI_GenBank
Match: gi|375332083|gb|AFA52581.1| (putative endogluconase [Vaucheria litorea])

HSP 1 Score: 239.195 bits (609), Expect = 4.874e-67
Identity = 153/462 (33.12%), Postives = 232/462 (50.22%), Query Frame = 0
Query:  232 IQLKGLNWFGLD-RINIFEGT-NYKTIDQVMAFFVAHNINALRLPFSLAFALTPMDHEEAEAGGGQGELQYPDRGKISP----EYIGLTSWEIIDLLFEKAKENGILILLDMHTLDPDKGVSRLWYDPAKYSEATVLWGWERILSRYVHHWNLFGLDIMNECHDHASWGKGDPMTDFNRYVERFILFVHERVPSYRGLFFVEGIFLNAMGRDQSPWP-------YWWGGNLFGADKYPIDVKIAALNDRIVYAPHIYGPDVSNMFYFNDWSFPNNLKNVWDNQFGWLIKSTRKALVVGEWGGSCNNKDGIVQEHLAQWMIDNCFQSNFWWALNPGSADTDGLMSQDW-------SHFDERKMALLGKVQPNPSKFTYEKATDMVCVRHGAPPNPQC----------ADDLAHILKTPDTQQDQD------NGGWRKRAPIDGCESNKPWRAGCAEGLAEYRG 657
             +LKG NWFG +  +NI  G     T+D+V+ F  A++ N LR+P SL+ AL                    ++ KIS     E     SW+ I+ L +KA E G+L+L D H L  D   + LWY    Y E   + GW  I+ ++    N  G+D+ NE H  A+WGKG   TD+N+  ER +  + E++P+Y  L FVEGI   + G   +P+         +WG N FG     +D     LN  +VY+PHIYGPD+ +  YFN   FP+N+  +W+ Q G++   T KA+++GEWGG    KD I+QE   Q+M+D C   +F+W++ P S D  GL+++ W       + F   K+ L+ + QP PS FT   + D  C+  GA  +  C          + DL ++L + + +  ++      NG   K   +  C S +  + G    L+E  G
Sbjct:   58 FRLKGANWFGFNTSLNILHGLWGDVTMDEVLDFLAANDFNGLRIPLSLSLAL-------------------DNQTKISQYQCVECTSDLSWDAIERLMDKAAERGLLVLFDFHKL-ADGESTELWYSD-NYPEEKFIEGWVNIIEKFGSWPNFMGIDLFNEPHISATWGKG-LETDWNKGAERIVQGIVEQIPTYNKLIFVEGI---SSGGSSTPYDEDDPANDQFWGSNFFGLYDAEVDFGTPELNKLLVYSPHIYGPDLYDHDYFNASDFPDNMPEIWEKQIGFIESLTGKAVIIGEWGGKMEGKDAILQEKWVQYMLDACISGSFYWSVTPNSGDLGGLLTESWDIPQSGDTQF--FKLTLIAEAQPTPSLFTQPISGDQYCLDFGAFADNSCWTNTNSRRDISLDLGNLLVSAENKASKEISNIACNGKMNKENSV--CCSAECGQCGGINCLSEVHG 490          
BLAST of EWM21124.1 vs. NCBI_GenBank
Match: gi|319655629|gb|ADV58321.1| (cellulase 2, partial [Pristionchus pacificus] >gi|319655639|gb|ADV58326.1| cellulase 2, partial [Pristionchus pacificus] >gi|319655647|gb|ADV58330.1| cellulase 2, partial [Pristionchus pacificus])

HSP 1 Score: 221.09 bits (562), Expect = 8.465e-61
Identity = 129/385 (33.51%), Postives = 195/385 (50.65%), Query Frame = 0
Query:  232 IQLKGLNWFGLDRINIFEGTNYK-------TIDQVMAFFVAHNINALRLPFSLAFALTPMDHEEAEAGGGQGELQYPDRGKISPEYIGLTSWEIIDLLFEKAKENGILILLDMHTLDPDKGVSRLWYDPAKYSEATVLWGWERILSRYVHHWNLFGLDIMNECHDHASWGKGDPMTDFNRYVERFILFVHERVPSYRGLFFVEGIFLNAMGRDQSPWPYWWGGNLFGADKYPIDVKIAALNDRIVYAPHIYGPDVSNMFYFNDWSFPNNLKNVWDNQFGWLIKSTRKALVVGEWGG--SCNNKDGIVQEHLAQWMIDNCFQSNFWWALNPGSADTDGLMSQDWSHFDERKMALLGKVQPNPSKFTYEKATDMVCVRHGAPPNPQC 607
            + LKG+N+FG      FE   Y         ++  + F   +N NA+R+PFSL        +                    +P   G T+ +++D+  ++A E G+LI+LD H + P  G+S LWY+   YSE+       +  ++    WN+F +D+ NE HD ASWG  +  TD+N+  ER I      + S+ GLFFVEGI               WG  L    ++PI+    +LN+R+VY+PH YGP V +   FN   FPNN+  ++  ++G+++  T + +VVGEWGG     +KD    +   +W+   C  +NF+W LNP SADT GL+  DW     RK+ L  + QPNP+KF  +     +C+  GA P   C
Sbjct:    8 LVLKGINYFG------FETETYTPHGIWSYDLNFYLDFIKNNNFNAIRVPFSLEMVKNNPSNLNINCA-------------TNPGLCGKTALQLLDVFIDRAAERGLLIMLDNHRITPGGGISELWYN-NDYSES-------QKFTKTHCRWNVFAIDLKNEPHDSASWGNSNAATDWNKAAERII----NSLSSFLGLFFVEGIE--------------WGNRLENVAQFPINTGNPSLNNRVVYSPHCYGPSVYDRPEFNTPDFPNNVDGIYMVKYGFIVNQTGQPVVVGEWGGRAEVGSKDMTWNQWYVEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPIPRKINLTNRAQPNPTKFQAQNG--QICITAGAFPEAHC 345          
BLAST of EWM21124.1 vs. NCBI_GenBank
Match: gi|319655621|gb|ADV58317.1| (cellulase 2, partial [Pristionchus pacificus] >gi|319655623|gb|ADV58318.1| cellulase 2, partial [Pristionchus pacificus] >gi|319655651|gb|ADV58332.1| cellulase 2, partial [Pristionchus pacificus])

HSP 1 Score: 219.935 bits (559), Expect = 2.174e-60
Identity = 128/385 (33.25%), Postives = 195/385 (50.65%), Query Frame = 0
Query:  232 IQLKGLNWFGLDRINIFEGTNYK-------TIDQVMAFFVAHNINALRLPFSLAFALTPMDHEEAEAGGGQGELQYPDRGKISPEYIGLTSWEIIDLLFEKAKENGILILLDMHTLDPDKGVSRLWYDPAKYSEATVLWGWERILSRYVHHWNLFGLDIMNECHDHASWGKGDPMTDFNRYVERFILFVHERVPSYRGLFFVEGIFLNAMGRDQSPWPYWWGGNLFGADKYPIDVKIAALNDRIVYAPHIYGPDVSNMFYFNDWSFPNNLKNVWDNQFGWLIKSTRKALVVGEWGG--SCNNKDGIVQEHLAQWMIDNCFQSNFWWALNPGSADTDGLMSQDWSHFDERKMALLGKVQPNPSKFTYEKATDMVCVRHGAPPNPQC 607
            + LKG+N+FG      FE   Y         ++  + F   +N NA+R+PFSL        +                    +P   G T+ +++D+  ++A E G+LI+LD H + P  G+S LWY+  +Y E+       +  ++    WN+F +D+ NE HD ASWG  +  TD+N+  ER I      + S+ GLFFVEGI               WG  L    ++PI+    +LN+R+VY+PH YGP V +   FN   FPNNL  ++  ++G+++  T + +VVGEWGG     ++D    +   +W+   C  +NF+W LNP SADT GL+  DW     RK+ L  + QPNP+KF  +     +C+  GA P   C
Sbjct:    8 LVLKGINYFG------FETETYTPHGIWSYDLNFYLDFIKNNNFNAIRVPFSLEMVKNNPSNLNINCA-------------TNPGLCGKTALQLLDVFIDRAAERGLLIMLDNHRITPGGGISELWYN-NEYPES-------QKFTKTHCRWNVFAIDLKNEPHDSASWGNSNAATDWNKAAERII----NSLSSFLGLFFVEGIE--------------WGNRLENVAQFPINTGNPSLNNRVVYSPHCYGPSVYDRPEFNTPDFPNNLDGIYMVKYGFIVNQTGQPVVVGEWGGRAEVGSRDMTWNQWYVEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPIPRKINLTNRAQPNPTKFQAQNG--QICITAGAFPEAHC 345          
BLAST of EWM21124.1 vs. NCBI_GenBank
Match: gi|319655615|gb|ADV58314.1| (cellulase 2, partial [Pristionchus pacificus] >gi|319655633|gb|ADV58323.1| cellulase 2, partial [Pristionchus pacificus] >gi|319655637|gb|ADV58325.1| cellulase 2, partial [Pristionchus pacificus] >gi|319655641|gb|ADV58327.1| cellulase 2, partial [Pristionchus pacificus] >gi|319655649|gb|ADV58331.1| cellulase 2, partial [Pristionchus pacificus] >gi|319655655|gb|ADV58334.1| cellulase 2, partial [Pristionchus pacificus])

HSP 1 Score: 219.935 bits (559), Expect = 2.459e-60
Identity = 128/385 (33.25%), Postives = 195/385 (50.65%), Query Frame = 0
Query:  232 IQLKGLNWFGLDRINIFEGTNYK-------TIDQVMAFFVAHNINALRLPFSLAFALTPMDHEEAEAGGGQGELQYPDRGKISPEYIGLTSWEIIDLLFEKAKENGILILLDMHTLDPDKGVSRLWYDPAKYSEATVLWGWERILSRYVHHWNLFGLDIMNECHDHASWGKGDPMTDFNRYVERFILFVHERVPSYRGLFFVEGIFLNAMGRDQSPWPYWWGGNLFGADKYPIDVKIAALNDRIVYAPHIYGPDVSNMFYFNDWSFPNNLKNVWDNQFGWLIKSTRKALVVGEWGG--SCNNKDGIVQEHLAQWMIDNCFQSNFWWALNPGSADTDGLMSQDWSHFDERKMALLGKVQPNPSKFTYEKATDMVCVRHGAPPNPQC 607
            + LKG+N+FG      FE   Y         ++  + F   +N NA+R+PFSL        +                    +P   G T+ +++D+  ++A E G+LI+LD H + P  G+S LWY+  +Y E+       +  ++    WN+F +D+ NE HD ASWG  +  TD+N+  ER I      + S+ GLFFVEGI               WG  L    ++PI+    ++N+R+VY+PH YGP V +   FN   FPNNL  ++  ++G+++  T + +VVGEWGG     +KD    +   +W+   C  +NF+W LNP SADT GL+  DW     RK+ L  + QPNP+KF  +     +C+  GA P   C
Sbjct:    8 LVLKGINYFG------FETETYTPHGIWSYDLNFYLDFIKNNNFNAIRVPFSLEMVKNNPSNLNINCA-------------TNPGLCGKTALQLLDVFIDRAAERGLLIMLDNHRITPGGGISELWYN-NEYPES-------QKFTKTHCRWNVFAIDLKNEPHDSASWGNSNAATDWNKAAERII----NSLSSFLGLFFVEGIE--------------WGNRLENVAQFPINTGNPSVNNRVVYSPHCYGPSVYDRPEFNTPDFPNNLDGIYMVKYGFIVNQTGQPVVVGEWGGRAEVGSKDMTWNQWYVEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPIPRKINLTNRAQPNPTKFQAQNG--QICITAGAFPEAHC 345          
BLAST of EWM21124.1 vs. NCBI_GenBank
Match: gi|319655643|gb|ADV58328.1| (cellulase 2, partial [Pristionchus pacificus])

HSP 1 Score: 219.935 bits (559), Expect = 2.510e-60
Identity = 128/385 (33.25%), Postives = 196/385 (50.91%), Query Frame = 0
Query:  232 IQLKGLNWFGLDRINIFEGTNYK-------TIDQVMAFFVAHNINALRLPFSLAFALTPMDHEEAEAGGGQGELQYPDRGKISPEYIGLTSWEIIDLLFEKAKENGILILLDMHTLDPDKGVSRLWYDPAKYSEATVLWGWERILSRYVHHWNLFGLDIMNECHDHASWGKGDPMTDFNRYVERFILFVHERVPSYRGLFFVEGIFLNAMGRDQSPWPYWWGGNLFGADKYPIDVKIAALNDRIVYAPHIYGPDVSNMFYFNDWSFPNNLKNVWDNQFGWLIKSTRKALVVGEWGG--SCNNKDGIVQEHLAQWMIDNCFQSNFWWALNPGSADTDGLMSQDWSHFDERKMALLGKVQPNPSKFTYEKATDMVCVRHGAPPNPQC 607
            + LKG+N+FG      FE   Y         ++  + F   +N NA+R+PFSL        +                    +P   G T+ +++D+  ++A E G+LI+LD H + P  G+S LWY+  +Y E+       +  ++    WN+F +D+ NE HD ASWG  +  TD+N+  ER I      + S+ GLFFVEGI               WG  L    ++PI+    +LN+R+VY+PH YGP V +   FN   FPNNL+ ++  ++G+++  T + +VVGEWGG     ++D    +   +W+   C  +NF+W LNP SADT GL+  DW     RK+ L  + QPNP+KF  +     +C+  GA P   C
Sbjct:    8 LVLKGINYFG------FETETYTPHGIWSYDLNFYLDFIKNNNFNAIRVPFSLEMVKNNPSNLNINCA-------------TNPGLCGKTALQLLDVFIDRAAERGLLIMLDNHRITPGGGISELWYN-NEYPES-------QKFTKTHCRWNVFAIDLKNEPHDSASWGNSNAATDWNKAAERII----NSLSSFLGLFFVEGIE--------------WGNRLENVAQFPINTGNPSLNNRVVYSPHCYGPSVYDRPEFNTPDFPNNLEGMYMVKYGFIVNQTGQPVVVGEWGGRAEVGSRDMTWNQWYVEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPIPRKINLTNRAQPNPTKFQAQNG--QICITAGAFPEAHC 345          
The following BLAST results are available for this feature:
BLAST of EWM21124.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101191|gb|EWM21124.1|0.000e+0100.00cellulase 2 [Nannochloropsis gaditana][more]
gi|585108749|gb|EWM26661.1|1.784e-9740.16cellulase 2 [Nannochloropsis gaditana][more]
gi|585104020|gb|EWM23139.1|1.038e-8040.66cellulase 2 [Nannochloropsis gaditana][more]
gi|585108543|gb|EWM26490.1|2.364e-8039.64cellulase 2 [Nannochloropsis gaditana][more]
gi|585100881|gb|EWM20925.1|3.178e-7639.55cellulase 2 [Nannochloropsis gaditana][more]
gi|375332083|gb|AFA52581.1|4.874e-6733.12putative endogluconase [Vaucheria litorea][more]
gi|319655629|gb|ADV58321.1|8.465e-6133.51cellulase 2, partial [Pristionchus pacificus] >gi|... [more]
gi|319655621|gb|ADV58317.1|2.174e-6033.25cellulase 2, partial [Pristionchus pacificus] >gi|... [more]
gi|319655615|gb|ADV58314.1|2.459e-6033.25cellulase 2, partial [Pristionchus pacificus] >gi|... [more]
gi|319655643|gb|ADV58328.1|2.510e-6033.25cellulase 2, partial [Pristionchus pacificus][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9568rna9568Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications