EWM21134.1, cds9534 (CDS) Nannochloropsis gaditana

Overview
NameEWM21134.1
Unique Namecds9534
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037254.1:185185..185369 +
Alignment locationKK037254.1:185564..186707 +
Alignment locationKK037254.1:186941..187270 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21134.1
Productincenp-like protein
Orig transcript idgnl|cribi|Naga_100041g4.3704.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:185185..185369 +
KK037254.1supercontigKK037254.1:185564..186707 +
KK037254.1supercontigKK037254.1:186941..187270 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0007049cell cycle
GO:0016043cellular component organization
Vocabulary: INTERPRO
TermDefinition
IPR005635Inner_centromere_prot_ARK-bd
Homology
BLAST of EWM21134.1 vs. NCBI_GenBank
Match: gi|585101201|gb|EWM21134.1| (incenp-like protein [Nannochloropsis gaditana])

HSP 1 Score: 1121.3 bits (2899), Expect = 0.000e+0
Identity = 552/552 (100.00%), Postives = 552/552 (100.00%), Query Frame = 0
Query:    1 MMTNGHASLPATPASPFKEGRALWSITGKLEGRTSEGKEALDSLHDNAMEYMRSCFNTAKRRLTEDSSLCERSPQRKGTTAPENTPTSATGSDWSIKKQRRSVAEAEQMALVKAKVALFESYRSATTHKHSSPSTIVSDPVSAIAITPKKSIRLTPSKSASDSPSTTSYHAVFPGLNLGETMTLASTSARSFQISVSRIPEEAEDEGAGEETSREGRGAAGATFNAGKPFRGALRESPTLRQSLQPSLGLPAHHAPKTLEAARGGPGPGGAGGRTTPDQPLTAHHITRAMKGLQLTEIPESSSIEPGKGSDKGKLGEGGEGGGLIETGPAPIIECNGSGVHPLEGTRPASHCSSGAGGVGGFLGIVQKTLGLSWQCAALPPTHTSAINTMASSTSSPLEPLPPLDPADTYPMSDSDEEGRPLGEDVVGSDEEAWDRRRRSAKKIPDWARGTTLAAALDRQFTTDPATWVDPDTIFPEVPPTCNLEEIFKVRKKRYYKRTSSGMWEKDGLTPVERMTYRRAMACERKGEEVSVNGGNSSRVGVSNISIVGKKE 552
            MMTNGHASLPATPASPFKEGRALWSITGKLEGRTSEGKEALDSLHDNAMEYMRSCFNTAKRRLTEDSSLCERSPQRKGTTAPENTPTSATGSDWSIKKQRRSVAEAEQMALVKAKVALFESYRSATTHKHSSPSTIVSDPVSAIAITPKKSIRLTPSKSASDSPSTTSYHAVFPGLNLGETMTLASTSARSFQISVSRIPEEAEDEGAGEETSREGRGAAGATFNAGKPFRGALRESPTLRQSLQPSLGLPAHHAPKTLEAARGGPGPGGAGGRTTPDQPLTAHHITRAMKGLQLTEIPESSSIEPGKGSDKGKLGEGGEGGGLIETGPAPIIECNGSGVHPLEGTRPASHCSSGAGGVGGFLGIVQKTLGLSWQCAALPPTHTSAINTMASSTSSPLEPLPPLDPADTYPMSDSDEEGRPLGEDVVGSDEEAWDRRRRSAKKIPDWARGTTLAAALDRQFTTDPATWVDPDTIFPEVPPTCNLEEIFKVRKKRYYKRTSSGMWEKDGLTPVERMTYRRAMACERKGEEVSVNGGNSSRVGVSNISIVGKKE
Sbjct:    1 MMTNGHASLPATPASPFKEGRALWSITGKLEGRTSEGKEALDSLHDNAMEYMRSCFNTAKRRLTEDSSLCERSPQRKGTTAPENTPTSATGSDWSIKKQRRSVAEAEQMALVKAKVALFESYRSATTHKHSSPSTIVSDPVSAIAITPKKSIRLTPSKSASDSPSTTSYHAVFPGLNLGETMTLASTSARSFQISVSRIPEEAEDEGAGEETSREGRGAAGATFNAGKPFRGALRESPTLRQSLQPSLGLPAHHAPKTLEAARGGPGPGGAGGRTTPDQPLTAHHITRAMKGLQLTEIPESSSIEPGKGSDKGKLGEGGEGGGLIETGPAPIIECNGSGVHPLEGTRPASHCSSGAGGVGGFLGIVQKTLGLSWQCAALPPTHTSAINTMASSTSSPLEPLPPLDPADTYPMSDSDEEGRPLGEDVVGSDEEAWDRRRRSAKKIPDWARGTTLAAALDRQFTTDPATWVDPDTIFPEVPPTCNLEEIFKVRKKRYYKRTSSGMWEKDGLTPVERMTYRRAMACERKGEEVSVNGGNSSRVGVSNISIVGKKE 552          
BLAST of EWM21134.1 vs. NCBI_GenBank
Match: gi|553187471|ref|XP_005854617.1| (incenp-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|422294441|gb|EKU21741.1| incenp-like protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 194.126 bits (492), Expect = 1.039e-56
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
Query:  462 TTDPATWVDPDTIFPEVPPTCNLEEIFKVRKKRYYKRTSSGMWEKDGLTPVERMTYRRAMACERKGEEVSVNGGNSSRVGVSNISIVGKKE 552
            TTDPATWVDPDTIFPEVPPTCNLEEIFKVRKKRYYKRTSSGMWEKDGLTPVERMTYRRAMACERKGEEVSVNGGNSSRVGVSNISIVGKKE
Sbjct:    1 TTDPATWVDPDTIFPEVPPTCNLEEIFKVRKKRYYKRTSSGMWEKDGLTPVERMTYRRAMACERKGEEVSVNGGNSSRVGVSNISIVGKKE 91          
BLAST of EWM21134.1 vs. NCBI_GenBank
Match: gi|219118845|ref|XP_002180189.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408446|gb|EEC48380.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 92.4337 bits (228), Expect = 4.899e-16
Identity = 52/118 (44.07%), Postives = 70/118 (59.32%), Query Frame = 0
Query:  404 LDPADTYPMSDSDEEGRPLGEDVVGSDEEAWDRRRRSAKKIPDWARGTTLAAALDRQFTTDPATWVDPDTIFPEVPPTCNLEEIFKVRKKRYYKRTSSGMWEKDGLTPVERMTYRRAM 521
            L P DTY MSD          +   SD ++ +  R+  K++P WA  + L  AL++Q+T +  T +DPD IF EV  TC+LE IF  RK RY +RTSSG W KD  T  E++TY+R M
Sbjct:  486 LSPIDTYEMSD---------REASESDSDSDEESRKPRKRVPMWAEKSNLIPALEKQYTVNTGT-LDPDEIFGEVQ-TCDLEAIFDQRKTRYQRRTSSGNWSKDRATTYEKLTYKRTM 592          
BLAST of EWM21134.1 vs. NCBI_GenBank
Match: gi|299471719|emb|CBN76940.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 87.0409 bits (214), Expect = 2.088e-15
Identity = 43/84 (51.19%), Postives = 56/84 (66.67%), Query Frame = 0
Query:  442 KKIPDWARGTTLAAALDRQFTTDPATWVDPDTIFPEVPPTCNLEEIFKVRKKRYYKRTSSGMWEKDGLTPVERMTYRRAMACER 525
            KKIP WA+G+ L+ AL RQ+ T     VDPD IFPEV  TC+LE IF V K RY++R SS  W  D +TP E +TY+R++   +
Sbjct:  193 KKIPAWAKGSALSEALTRQYAT--GQKVDPDKIFPEVF-TCDLEAIFPVNKSRYHRRGSSANWTPDRVTPQEVLTYKRSVGIAK 273          
BLAST of EWM21134.1 vs. NCBI_GenBank
Match: gi|397614233|gb|EJK62675.1| (hypothetical protein THAOC_16702 [Thalassiosira oceanica])

HSP 1 Score: 85.1149 bits (209), Expect = 9.835e-14
Identity = 49/119 (41.18%), Postives = 70/119 (58.82%), Query Frame = 0
Query:  403 PLDPADTYPMSDSDEEGRPLGEDVVGSDEEAWDRRRRSAKKIPDWARGTTLAAALDRQFTTDPATWVDPDTIFPEVPPTCNLEEIFKVRKKRYYKRTSSGMWEKDGLTPVERMTYRRAM 521
            PL P  TY MSD +EE     +     +      R+R  K +P WA+ + L  AL++Q+   P   +DPD IF EV  +CNL+EIF  +K RY +RTSSG W +D +T  E++ Y+RA+
Sbjct:  589 PLSPKQTYEMSDREEESVSESDSDSEYE------RQRPKKTVPQWAQKSNLMRALEKQYADGP-NRLDPDKIFGEVL-SCNLDEIFDKKKARYQRRTSSGNWSQDHVTAKEKLAYKRAV 699          
BLAST of EWM21134.1 vs. NCBI_GenBank
Match: gi|299473098|emb|CBN77491.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 80.4925 bits (197), Expect = 3.222e-12
Identity = 40/83 (48.19%), Postives = 55/83 (66.27%), Query Frame = 0
Query:  444 IPDWARGTTLAAALDRQFT-TDPATWVDPDTIFPEVPPTCNLEEIFKVRKKRYYKRTSSGMWEKDGLTPVERMTYRRAMACER 525
            IPDWARG  LA  LD+Q+   +P   ++PD IFPE   TCNLE IF  +K+++  R+SSG W  D LT  E++ Y+RAM  ++
Sbjct:  553 IPDWARGKALAKILDKQYGGPNP---LNPDKIFPEFF-TCNLEHIFNTKKQKW-DRSSSGNWHTDRLTIAEKLAYQRAMGFDK 630          
BLAST of EWM21134.1 vs. NCBI_GenBank
Match: gi|585106231|gb|EWM24703.1| (incenp protein [Nannochloropsis gaditana])

HSP 1 Score: 80.8777 bits (198), Expect = 3.513e-12
Identity = 39/87 (44.83%), Postives = 53/87 (60.92%), Query Frame = 0
Query:  443 KIPDWARGTTLAAALDRQFTTDPATWVDPDTIFPEVPPTCNLEEIFK--------VRKKRYYKRTSSGMWEKDGLTPVERMTYRRAM 521
            ++PDWA+G  L  AL+ QF       VDPD+IFPEV  TC+LEEIFK         +K+ Y +R S+G W++D L+  E+  YR  M
Sbjct: 1039 RVPDWAKGPALREALEAQFNKK--HKVDPDSIFPEV-RTCDLEEIFKSYQQGGAQAKKRAYRQRQSTGNWQRDELSSAEKTRYREDM 1122          
BLAST of EWM21134.1 vs. NCBI_GenBank
Match: gi|123475419|ref|XP_001320887.1| (hypothetical protein [Trichomonas vaginalis G3] >gi|121903702|gb|EAY08664.1| conserved hypothetical protein [Trichomonas vaginalis G3])

HSP 1 Score: 73.559 bits (179), Expect = 1.006e-10
Identity = 34/79 (43.04%), Postives = 45/79 (56.96%), Query Frame = 0
Query:  442 KKIPDWARGTTLAAALDRQFTTDPATWVDPDTIFPEVPPTCNLEEIFKVRKKRYYKRTSSGMWEKDGLTPVERMTYRRA 520
            K IP+WARG  L   L +Q+       +DPD IF + P  CNLEEIF  + +++ KR  SG W +DG+T  E   Y  A
Sbjct:  225 KSIPNWARGEQLEKQLKKQYL------IDPDEIFFDFPMECNLEEIFGTQNQKWAKRNESGYWAQDGVTQEEIRNYSSA 297          
BLAST of EWM21134.1 vs. NCBI_GenBank
Match: gi|673030090|ref|XP_008869006.1| (hypothetical protein H310_05917 [Aphanomyces invadans] >gi|574475401|gb|ETW02401.1| hypothetical protein H310_05917 [Aphanomyces invadans])

HSP 1 Score: 70.8626 bits (172), Expect = 1.030e-10
Identity = 49/118 (41.53%), Postives = 62/118 (52.54%), Query Frame = 0
Query:  409 TYPMSDSDEEGRPLGEDVVGSDEEAWDRRRRSAKKIPDWARGTTLAAALDRQFTTDPATWVDPD-TIFPEVPPTCNLEEIFK----VRKKRYYKRTSSGMWEKDGLTPVERMTYRRAM 521
             Y MSD      P  +D   SD E         KKIP WA+   L  AL RQF     + +DP  TIFP+   TC+LE IF+     +KKR+ KRTSSG W  D  T  +++ Y+RAM
Sbjct:   64 NYEMSDG-----PESDDSGNSDSEC--------KKIPSWAQRDALEQALARQFG---PSAIDPTPTIFPDFVDTCDLEAIFQPADASKKKRFQKRTSSGNWLADRPTMRDKVAYKRAM 165          
BLAST of EWM21134.1 vs. NCBI_GenBank
Match: gi|1072232488|gb|OEU17219.1| (hypothetical protein FRACYDRAFT_268629 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 69.3218 bits (168), Expect = 1.103e-10
Identity = 37/85 (43.53%), Postives = 53/85 (62.35%), Query Frame = 0
Query:  439 RSAKKIPDWARGTTLAAALDRQFTTDPATW-VDPDTIFPEVPPTCNLEEIFKVRKKRYYK-RTSSGMWEKDGLTPVERMTYRRAM 521
            ++ KKIP WA    L  AL++Q+     +  VDPD IFPEV  +C+LE IF  +K + Y+ R SSG W +D +T  E++ Y+R M
Sbjct:   28 KTKKKIPTWALRANLYPALEKQYNGHIGSRKVDPDEIFPEVQ-SCDLEAIFGTKKAKAYRSRASSGNWAQDKVTVAEKLVYKREM 111          
The following BLAST results are available for this feature:
BLAST of EWM21134.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101201|gb|EWM21134.1|0.000e+0100.00incenp-like protein [Nannochloropsis gaditana][more]
gi|553187471|ref|XP_005854617.1|1.039e-56100.00incenp-like protein, partial [Nannochloropsis gadi... [more]
gi|219118845|ref|XP_002180189.1|4.899e-1644.07predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|299471719|emb|CBN76940.1|2.088e-1551.19conserved unknown protein [Ectocarpus siliculosus][more]
gi|397614233|gb|EJK62675.1|9.835e-1441.18hypothetical protein THAOC_16702 [Thalassiosira oc... [more]
gi|299473098|emb|CBN77491.1|3.222e-1248.19conserved unknown protein [Ectocarpus siliculosus][more]
gi|585106231|gb|EWM24703.1|3.513e-1244.83incenp protein [Nannochloropsis gaditana][more]
gi|123475419|ref|XP_001320887.1|1.006e-1043.04hypothetical protein [Trichomonas vaginalis G3] >g... [more]
gi|673030090|ref|XP_008869006.1|1.030e-1041.53hypothetical protein H310_05917 [Aphanomyces invad... [more]
gi|1072232488|gb|OEU17219.1|1.103e-1043.53hypothetical protein FRACYDRAFT_268629 [Fragilario... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9565rna9565Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications