EWM21126.1, cds9532 (CDS) Nannochloropsis gaditana

Overview
NameEWM21126.1
Unique Namecds9532
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037254.1:180209..180217 +
Alignment locationKK037254.1:180398..181696 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21126.1
Productelongation factor 1
Orig transcript idgnl|cribi|Naga_100041g2.3696.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:180209..180217 +
KK037254.1supercontigKK037254.1:180398..181696 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0008135translation factor activity, RNA binding
GO:0005515protein binding
GO:0003746translation elongation factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006414translational elongation
Vocabulary: INTERPRO
TermDefinition
IPR004046GST_C
IPR010987Glutathione-S-Trfase_C-like
IPR012336Thioredoxin-like_fold
IPR004045Glutathione_S-Trfase_N
IPR001662Transl_elong_EF1_G_con
Homology
BLAST of EWM21126.1 vs. NCBI_GenBank
Match: gi|585101193|gb|EWM21126.1| (elongation factor 1 [Nannochloropsis gaditana])

HSP 1 Score: 892.493 bits (2305), Expect = 0.000e+0
Identity = 435/435 (100.00%), Postives = 435/435 (100.00%), Query Frame = 0
Query:    1 MALKLYTNPGNFRAFKILVAALYNGVDIDVVDLDLAAKKRTDVLAKSPAGKVPVLETPQGLLFESNAIARYIARARRDTDLYGVSFFDSGLVDAWIDFAAQEVELPATLWVYPVFGYLPHNAAVTEKAKADLGAAMEILDNHLADKTYLVGEKVTLADITVASALVYPYKIVMSPEYRAQYPHVLRWFLTIVNQPHFRAVIGDVVLAEKELVPSGAPPALALPAKGAGKKEKKEKKEKAAAPKQEKKKEEAPAKTGEDLEEQLAKEEKKKAAEHPLKILDRESPSEFVMDTWKKTYSNARSYDQAMDEFWKVFDSLGYSLWFCNYQYNSELTKLFMTCNLVSGFVQRTDELRKWAFGCMWILGEDAPGKMEIRGLWLMRGQSDSYIKSANPDAEFYTWTKVPTPVSDEDKKKVQEYWCSDDSLAGLPVLDCKVFK 435
            MALKLYTNPGNFRAFKILVAALYNGVDIDVVDLDLAAKKRTDVLAKSPAGKVPVLETPQGLLFESNAIARYIARARRDTDLYGVSFFDSGLVDAWIDFAAQEVELPATLWVYPVFGYLPHNAAVTEKAKADLGAAMEILDNHLADKTYLVGEKVTLADITVASALVYPYKIVMSPEYRAQYPHVLRWFLTIVNQPHFRAVIGDVVLAEKELVPSGAPPALALPAKGAGKKEKKEKKEKAAAPKQEKKKEEAPAKTGEDLEEQLAKEEKKKAAEHPLKILDRESPSEFVMDTWKKTYSNARSYDQAMDEFWKVFDSLGYSLWFCNYQYNSELTKLFMTCNLVSGFVQRTDELRKWAFGCMWILGEDAPGKMEIRGLWLMRGQSDSYIKSANPDAEFYTWTKVPTPVSDEDKKKVQEYWCSDDSLAGLPVLDCKVFK
Sbjct:    1 MALKLYTNPGNFRAFKILVAALYNGVDIDVVDLDLAAKKRTDVLAKSPAGKVPVLETPQGLLFESNAIARYIARARRDTDLYGVSFFDSGLVDAWIDFAAQEVELPATLWVYPVFGYLPHNAAVTEKAKADLGAAMEILDNHLADKTYLVGEKVTLADITVASALVYPYKIVMSPEYRAQYPHVLRWFLTIVNQPHFRAVIGDVVLAEKELVPSGAPPALALPAKGAGKKEKKEKKEKAAAPKQEKKKEEAPAKTGEDLEEQLAKEEKKKAAEHPLKILDRESPSEFVMDTWKKTYSNARSYDQAMDEFWKVFDSLGYSLWFCNYQYNSELTKLFMTCNLVSGFVQRTDELRKWAFGCMWILGEDAPGKMEIRGLWLMRGQSDSYIKSANPDAEFYTWTKVPTPVSDEDKKKVQEYWCSDDSLAGLPVLDCKVFK 435          
BLAST of EWM21126.1 vs. NCBI_GenBank
Match: gi|298714497|emb|CBJ27519.1| (eukaryotic elongation factor-1 B gamma [Ectocarpus siliculosus])

HSP 1 Score: 470.7 bits (1210), Expect = 1.677e-161
Identity = 246/436 (56.42%), Postives = 310/436 (71.10%), Query Frame = 0
Query:    1 MALKLYTNPGNFRAFKILVAALYNGVDIDVVDLDLAAKKRT-DVLAKSPAGKVPVLETPQGLLFESNAIARYIARARRDTDLYGVSFFDSGLVDAWIDFAAQEVELPATLWVYPVFGYLPHNAAVTEKAKADLGAAMEILDNHLADKTYLVGEKVTLADITVASALVYPYKIVMSPEYRAQYPHVLRWFLTIVNQPHFRAVIGDVVLAEKELVPSGAPPALALPAKGAGKKEKKEKKEKAAAPKQEKKKEEAPAKTGEDLEEQLAKEEKKKAAEHPLKILDRESPSEFVMDTWKKTYSNARSYDQAMDEFWKVFDSLGYSLWFCNYQYNSELTKLFMTCNLVSGFVQRTDELRKWAFGCMWILGEDAPGKMEIRGLWLMRGQSDSYIKSANPDAEFYTWTKVPTPVSDEDKKKVQEYWCSDDSLAGLPVLDCKVFK 435
            MALKL+TNP NFRAFK+L+AA YNGV+++V + +  +  ++ D LAKSP G+VPVLETPQG +FESNAIARY+AR RRDT+LYGVSFF+S  VD+WIDF A E+ELPAT+W YPV GY+P+N A   KAK DL  A+  L+  L  +TYLVG+K+TLADITVASALVYP K+V+SPEYR  +P V RWF T VNQP F+AVIG V LA++E+   GAP A     K    K+ K+KKE         +    PA            EEKK  A HPL ++D+E+ S FV DTWKK YSN  SY+++M +FW++FD+ G+SLW C Y+YN+E T+LFMT NLV GF+QR+ E+RKWAFGCM I GE+   ++ + G WL+RGQS   +  AN DA +Y W KV TPVSD DK  V E WCS+ ++ G PVLD KVFK
Sbjct:    1 MALKLWTNPANFRAFKVLIAAEYNGVELEVPEFNHPSDSKSPDFLAKSPLGRVPVLETPQGSIFESNAIARYVARMRRDTELYGVSFFESAQVDSWIDFCAHEIELPATIWCYPVIGYMPYNDAAVSKAKEDLKIALGALEKALLHRTYLVGDKITLADITVASALVYPMKLVVSPEYRKAFPCVTRWFTTCVNQPQFKAVIGTVELAKEEMTAEGAPKAPKKEKKPQPAKKAKKKKEDKKEEDDGSRDLGMPA------------EEKK--APHPLAVMDKEAKSPFVGDTWKKIYSN-NSYEESMKQFWEIFDAEGWSLWICRYKYNAENTRLFMTSNLVGGFIQRSGEIRKWAFGCMQITGEEGK-ELIVSGAWLIRGQSIQPMVDANDDANWYDWVKVATPVSDADKALVTEMWCSETTVEGRPVLDGKVFK 420          
BLAST of EWM21126.1 vs. NCBI_GenBank
Match: gi|325180920|emb|CCA15330.1| (calciumdependent protein 1 putative [Albugo laibachii Nc14])

HSP 1 Score: 430.639 bits (1106), Expect = 9.658e-146
Identity = 217/433 (50.12%), Postives = 283/433 (65.36%), Query Frame = 0
Query:    3 LKLYTNPGNFRAFKILVAALYNGVDIDVVDLDLAAKKRTDVLAKSPAGKVPVLETPQGLLFESNAIARYIARARRDTDLYGVSFFDSGLVDAWIDFAAQEVELPATLWVYPVFGYLPHNAAVTEKAKADLGAAMEILDNHLADKTYLVGEKVTLADITVASALVYPYKIVMSPEYRAQYPHVLRWFLTIVNQPHFRAVIGDVVLAEKELVPSGAPPALALPAKGAGKKEKKEKKEKAAAPKQEKKKEEAPAKTGEDLEEQLAKEEKKKAAEHPLKILDRESPSEFVMDTWKKTYSNARSYDQAMDEFWKVFDSLGYSLWFCNYQYNSELTKLFMTCNLVSGFVQRTDELRKWAFGCMWILGEDAPGKMEIRGLWLMRGQSDSYIKSANPDAEFYTWTKVPTPVSDEDKKKVQEYWCSDDSLAGLPVLDCKVFK 435
            +KLY+ PGN+R FKIL+AA YNGVDI+V + D+   K  + LAK+P GKVPVLET  G LFESNAIARY+AR R D+ L G +FF+SG VD+W+DF+A E+E+P  +W+YPVFGY+  NA    KA  D+  A+++L+NHL  +TYLVGE++TLADI +AS LVYP K++M  E+R  Y  V RWF T+VNQP F+ VIGDV L +         P LA    G  K+ KK   +   APK+    EEAP              + KK  EHPL +L+RE PS+ V+D WK  YSN +    +M  FW  FDS GYS+W C+Y YN E   LFMT N V+GF+QR++ +RK+AFG M I GE+   K++I G WL RG +  +I  ANPDAE+YTW +V T   D  K ++  YWC+D  L G P+ D +VFK
Sbjct:   16 MKLYSYPGNYRVFKILIAAEYNGVDIEVPEFDMTTIKSKEFLAKNPLGKVPVLETENGSLFESNAIARYVARLRADSGLSGRTFFESGQVDSWMDFSAHELEVPLQMWLYPVFGYMKFNAGTKAKAMEDVKKALQVLENHLHLRTYLVGEQITLADIVIASLLVYPMKMLMDKEFRKPYSAVNRWFNTLVNQPEFQKVIGDVPLCD--------VPVLAEGDNGGKKETKKNAPKATNAPKE--TVEEAP--------------KPKKKVEHPLVVLNREKPSKMVLDEWKVQYSNTKPVSDSMKWFWDNFDSEGYSIWMCDYNYNEENKVLFMTSNAVNGFIQRSEGVRKFAFGVMHICGEEG-SKLDITGCWLFRGDTVEHIMEANPDAEYYTWKRV-TTFDDASKARIAAYWCNDAELEGRPLADSRVFK 422          
BLAST of EWM21126.1 vs. NCBI_GenBank
Match: gi|953492003|emb|CEG45580.1| (elongation factor 1 [Plasmopara halstedii])

HSP 1 Score: 425.631 bits (1093), Expect = 5.690e-144
Identity = 211/436 (48.39%), Postives = 285/436 (65.37%), Query Frame = 0
Query:    1 MALKLYTNPGNFRAFKILVAALYNGVDIDVVDLDLAAK-KRTDVLAKSPAGKVPVLETPQGLLFESNAIARYIARARRDTDLYGVSFFDSGLVDAWIDFAAQEVELPATLWVYPVFGYLPHNAAVTEKAKADLGAAMEILDNHLADKTYLVGEKVTLADITVASALVYPYKIVMSPEYRAQYPHVLRWFLTIVNQPHFRAVIGDVVLAEKELVPSGAPPALALPAKGAGKKEKKEKKEKAAAPKQEKKKEEAPAKTGEDLEEQLAKEEKKKAAEHPLKILDRESPSEFVMDTWKKTYSNARSYDQAMDEFWKVFDSLGYSLWFCNYQYNSELTKLFMTCNLVSGFVQRTDELRKWAFGCMWILGEDAPGKMEIRGLWLMRGQSDSYIKSANPDAEFYTWTKVPTPVSDEDKKKVQEYWCSDDSLAGLPVLDCKVFK 435
            M LKLYT PGN+R FK L+AA +NG++I++ + D A   K  +  AKSP GKVP+LET +G +FES AIA+Y+AR R DT LYG SFF+SG VDAWIDF+A E+E+P  +W+YP+ G+   NAA   KAK+D+  A++ L+NHL  +TYLVGE++TLADI +ASALVYP+K V+  ++R  YP + RWF T+VNQP F+AV+GDV L +  L          +  K A + EK   KE+   PK+                            EHPL +L+RE PS  ++D WK  YSN ++   AM  FW+  D+ GYSLWFC+Y YN+E TK+FMTCN V GF+QR++ +RK+AFG M + G +   ++ I G WL RG S+ ++  ANPDAE+YTWTK    ++DE K +V  YWC++D L G P+ D KVFK
Sbjct:    1 MVLKLYTYPGNYRVFKALIAAEFNGINIELPEFDFAKDIKSEEFKAKSPTGKVPLLETDEGCIFESGAIAKYVARLRADTGLYGKSFFESGQVDAWIDFSAYELEIPLEVWLYPILGWSKLNAAALTKAKSDVKKALQTLENHLHLRTYLVGEQITLADIFIASALVYPFKFVLDKDFRKPYPALNRWFSTLVNQPEFQAVVGDVPLIDVALTTEEDNSNTKVVKKEASQNEKASLKEEDVKPKK---------------------------VEHPLAVLNREKPSSMILDAWKVQYSNTKNLADAMTWFWEHLDTEGYSLWFCDYNYNNENTKMFMTCNAVGGFLQRSEAMRKYAFGVMDVCGAEG-SEIIITGCWLFRGDSEKHMIEANPDAEYYTWTKA--ELNDETKARVAAYWCNEDELEGKPIADSKVFK 406          
BLAST of EWM21126.1 vs. NCBI_GenBank
Match: gi|635367198|emb|CCI44608.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 424.091 bits (1089), Expect = 2.226e-143
Identity = 210/433 (48.50%), Postives = 279/433 (64.43%), Query Frame = 0
Query:    3 LKLYTNPGNFRAFKILVAALYNGVDIDVVDLDLAAKKRTDVLAKSPAGKVPVLETPQGLLFESNAIARYIARARRDTDLYGVSFFDSGLVDAWIDFAAQEVELPATLWVYPVFGYLPHNAAVTEKAKADLGAAMEILDNHLADKTYLVGEKVTLADITVASALVYPYKIVMSPEYRAQYPHVLRWFLTIVNQPHFRAVIGDVVLAEKELVPSGAPPALALPAKGAGKKEKKEKKEKAAAPKQEKKKEEAPAKTGEDLEEQLAKEEKKKAAEHPLKILDRESPSEFVMDTWKKTYSNARSYDQAMDEFWKVFDSLGYSLWFCNYQYNSELTKLFMTCNLVSGFVQRTDELRKWAFGCMWILGEDAPGKMEIRGLWLMRGQSDSYIKSANPDAEFYTWTKVPTPVSDEDKKKVQEYWCSDDSLAGLPVLDCKVFK 435
            +KLYT PGN+R FKIL+AA YNG+DI+V + D+   K  + LAK+P GKVPVLET  G LFESNAIARY+AR R DT LYG +FF+SG VD+WIDF+A E+E+P  +W+YP+FGY+  NA    KA  D+  A+++L+NHL  +TYLVGE +TLADI +AS LVYP K+++  + R  Y  V RWF T+VNQP F+ ++GDV L +         P LA    G  K+ KK   +   A KQ   +E  P                KK  EHPL +L+RE PS+ V+D WK  YSN +    +M  FW  FDS GYS+W C+Y YN E   LFMT N ++GF+QR++ +RK+AFG M I G++   K+ I G WL RG +  ++  ANPDAE+YTW +V T   D  K ++  YWC+D+ L G P+ D +VFK
Sbjct:    1 MKLYTYPGNYRVFKILIAAEYNGIDIEVPEFDMTTIKSKEFLAKNPLGKVPVLETENGALFESNAIARYVARLRADTGLYGQTFFESGQVDSWIDFSAHELEVPLQMWLYPIFGYMKFNAGTKAKAVEDVKKALQVLENHLHLRTYLVGEHITLADIVIASLLVYPMKMLLDKDLRKPYSAVNRWFSTLVNQPEFQNIVGDVPLCD--------VPVLAEGDNGGKKETKKTAGKAPKATKQSVAEEPKP----------------KKKVEHPLVVLNREKPSKMVLDEWKVQYSNTKPVIDSMKWFWDNFDSEGYSIWMCDYNYNDENKVLFMTSNAINGFIQRSEGVRKFAFGVMHICGKEG-SKLNITGCWLFRGDTIDHMMEANPDAEYYTWKRVAT-FDDASKARIAAYWCNDNELEGEPLADSRVFK 407          
BLAST of EWM21126.1 vs. NCBI_GenBank
Match: gi|301105367|ref|XP_002901767.1| (elongation factor 1-gamma, putative [Phytophthora infestans T30-4] >gi|262099105|gb|EEY57157.1| elongation factor 1-gamma, putative [Phytophthora infestans T30-4])

HSP 1 Score: 422.55 bits (1085), Expect = 9.165e-143
Identity = 221/436 (50.69%), Postives = 289/436 (66.28%), Query Frame = 0
Query:    1 MALKLYTNPGNFRAFKILVAALYNGVDIDVVDLDLAAKKRT-DVLAKSPAGKVPVLETPQGLLFESNAIARYIARARRDTDLYGVSFFDSGLVDAWIDFAAQEVELPATLWVYPVFGYLPHNAAVTEKAKADLGAAMEILDNHLADKTYLVGEKVTLADITVASALVYPYKIVMSPEYRAQYPHVLRWFLTIVNQPHFRAVIGDVVLAEKELVPSGAPPALALPAKGAGKKEKKEKKEKAAAPKQEKKKEEAPAKTGEDLEEQLAKEEKKKAAEHPLKILDRESPSEFVMDTWKKTYSNARSYDQAMDEFWKVFDSLGYSLWFCNYQYNSELTKLFMTCNLVSGFVQRTDELRKWAFGCMWILGEDAPGKMEIRGLWLMRGQSDSYIKSANPDAEFYTWTKVPTPVSDEDKKKVQEYWCSDDSLAGLPVLDCKVFK 435
            M LKLYT PGN+RAFK L+AA +NGVDI++ + D A   +T +  AK+PAGKVP+LET +G +FES AIA+Y+AR R DT LYG +FF+SG VDAWIDF+A E+E+P   W+YP+ G+   NAA   KAKAD+  A++ L+NHL  +TYLVGE++TLADI +ASALVYP+K V+  E+R  Y  V RWF T+VNQP F+AV+GDV L +  L   G          G    +K   K++ AAP     KEEAP               K K  EHPL +L+RE PS   +D WK  YSN R+   AM  FW+  D+ GYSLWFC+Y YN+E TK+FMTCN V GF+QR++ +RK+AFG M + G +   ++ I G WL RG S+ ++  ANPDAE+YTW K    ++DE K +V  YWC++D L G P+ D KVFK
Sbjct:    1 MVLKLYTYPGNYRAFKALIAAEFNGVDIELPEFDFAKDVKTKEFKAKTPAGKVPLLETDEGCIFESGAIAKYVARLRADTGLYGKTFFESGQVDAWIDFSAYELEIPLEAWLYPILGWGQFNAAALTKAKADVKKALQTLENHLHLRTYLVGEQITLADIFIASALVYPFKFVLDKEFRKPYSAVNRWFSTLVNQPEFQAVVGDVPLIDVALTAEG-------DNSGKKAAKKDAPKKEKAAP-----KEEAP---------------KPKKVEHPLAVLNREKPSSLNLDAWKVQYSNTRNLADAMTWFWEHLDTEGYSLWFCDYNYNNENTKMFMTCNAVGGFLQRSEAMRKYAFGVMDVCGAEG-SEIIITGCWLFRGDSEKHMIEANPDAEYYTWKKA--ELNDETKARVAAYWCNEDELEGKPIADSKVFK 406          
BLAST of EWM21126.1 vs. NCBI_GenBank
Match: gi|567964509|gb|ETK89994.1| (hypothetical protein L915_06152 [Phytophthora parasitica] >gi|567993211|gb|ETL43394.1| hypothetical protein L916_06088 [Phytophthora parasitica])

HSP 1 Score: 421.779 bits (1083), Expect = 1.593e-142
Identity = 222/434 (51.15%), Postives = 286/434 (65.90%), Query Frame = 0
Query:    3 LKLYTNPGNFRAFKILVAALYNGVDIDVVDLDLAAK-KRTDVLAKSPAGKVPVLETPQGLLFESNAIARYIARARRDTDLYGVSFFDSGLVDAWIDFAAQEVELPATLWVYPVFGYLPHNAAVTEKAKADLGAAMEILDNHLADKTYLVGEKVTLADITVASALVYPYKIVMSPEYRAQYPHVLRWFLTIVNQPHFRAVIGDVVLAEKELVPSGAPPALALPAKGAGKKEKKEKKEKAAAPKQEKKKEEAPAKTGEDLEEQLAKEEKKKAAEHPLKILDRESPSEFVMDTWKKTYSNARSYDQAMDEFWKVFDSLGYSLWFCNYQYNSELTKLFMTCNLVSGFVQRTDELRKWAFGCMWILGEDAPGKMEIRGLWLMRGQSDSYIKSANPDAEFYTWTKVPTPVSDEDKKKVQEYWCSDDSLAGLPVLDCKVFK 435
            +KLYT PGN+R FK+L+AA YNGVDI++ + D A   K  +  AK+P GKVP+LET +G LFES AIARY+AR R DT LYG +FF+SG VDAWIDF+A E+E+P  +WV+P+ G    NAA   KAKAD+  A++ L+NHL  +TYLVGE+VTLADI VASALVYP+K V+  E+R  Y  V RWF T+VNQP F+AV+GDV L +  L   G          G    +K   K++ AAP     KEEAP               K K  EHPL +L+RE PS   +D WK  YSN ++   AM  FW+  D+ GYSLWFC+Y YNSE TK+FMTCN V GF+QR++ +RK+AFG M + G +   ++ I G WL RG S+ ++  ANPDAE+YTW K    ++DE K +V  YWC++D L G P+ D KVFK
Sbjct:    1 MKLYTYPGNYRVFKVLIAAEYNGVDIELPEFDFAKDIKSKEFKAKTPIGKVPILETEEGTLFESGAIARYVARLRPDTGLYGKTFFESGQVDAWIDFSAYELEVPLEVWVHPILGVGKFNAAALTKAKADVKKALQTLENHLHLRTYLVGEQVTLADIVVASALVYPFKFVLDKEFRKPYSAVNRWFSTLVNQPEFQAVVGDVPLIDVALTAEG-------DNSGKKAAKKDAPKKEKAAP-----KEEAP---------------KPKKVEHPLAVLNREKPSSLNLDAWKVQYSNTKNLADAMTWFWEHLDTEGYSLWFCDYNYNSENTKMFMTCNAVGGFLQRSEAMRKYAFGVMDVCGAEG-SEIIITGCWLFRGDSEKHMIEANPDAEYYTWKK--AELNDETKARVAAYWCNEDELEGKPIADSKVFK 404          
BLAST of EWM21126.1 vs. NCBI_GenBank
Match: gi|570954614|gb|ETP19871.1| (hypothetical protein F441_06281 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 421.394 bits (1082), Expect = 2.789e-142
Identity = 222/433 (51.27%), Postives = 285/433 (65.82%), Query Frame = 0
Query:    4 KLYTNPGNFRAFKILVAALYNGVDIDVVDLDLAAK-KRTDVLAKSPAGKVPVLETPQGLLFESNAIARYIARARRDTDLYGVSFFDSGLVDAWIDFAAQEVELPATLWVYPVFGYLPHNAAVTEKAKADLGAAMEILDNHLADKTYLVGEKVTLADITVASALVYPYKIVMSPEYRAQYPHVLRWFLTIVNQPHFRAVIGDVVLAEKELVPSGAPPALALPAKGAGKKEKKEKKEKAAAPKQEKKKEEAPAKTGEDLEEQLAKEEKKKAAEHPLKILDRESPSEFVMDTWKKTYSNARSYDQAMDEFWKVFDSLGYSLWFCNYQYNSELTKLFMTCNLVSGFVQRTDELRKWAFGCMWILGEDAPGKMEIRGLWLMRGQSDSYIKSANPDAEFYTWTKVPTPVSDEDKKKVQEYWCSDDSLAGLPVLDCKVFK 435
            KLYT PGN+R FK+L+AA YNGVDI++ + D A   K  +  AK+P GKVP+LET +G LFES AIARY+AR R DT LYG +FF+SG VDAWIDF+A E+E+P  +WV+P+ G    NAA   KAKAD+  A++ L+NHL  +TYLVGE+VTLADI VASALVYP+K V+  E+R  Y  V RWF T+VNQP F+AV+GDV L +  L   G          G    +K   K++ AAP     KEEAP               K K  EHPL +L+RE PS   +D WK  YSN ++   AM  FW+  D+ GYSLWFC+Y YNSE TK+FMTCN V GF+QR++ +RK+AFG M + G +   ++ I G WL RG S+ ++  ANPDAE+YTW K    ++DE K +V  YWC++D L G P+ D KVFK
Sbjct:    5 KLYTYPGNYRVFKVLIAAEYNGVDIELPEFDFAKDIKSKEFKAKTPIGKVPILETEEGTLFESGAIARYVARLRPDTGLYGKTFFESGQVDAWIDFSAYELEVPLEVWVHPILGVGKFNAAALTKAKADVKKALQTLENHLHLRTYLVGEQVTLADIVVASALVYPFKFVLDKEFRKPYSAVNRWFSTLVNQPEFQAVVGDVPLIDVALTAEG-------DNSGKKAAKKDAPKKEKAAP-----KEEAP---------------KPKKVEHPLAVLNREKPSSLNLDAWKVQYSNTKNLADAMTWFWEHLDTEGYSLWFCDYNYNSENTKMFMTCNAVGGFLQRSEAMRKYAFGVMDVCGAEG-SEIIITGCWLFRGDSEKHMIEANPDAEYYTWKK--AELNDETKARVAAYWCNEDELEGKPIADSKVFK 407          
BLAST of EWM21126.1 vs. NCBI_GenBank
Match: gi|675165667|ref|XP_008891718.1| (hypothetical protein PPTG_02398 [Phytophthora parasitica INRA-310] >gi|567993202|gb|ETL43385.1| hypothetical protein L916_06090 [Phytophthora parasitica] >gi|568107845|gb|ETN22469.1| hypothetical protein PPTG_02398 [Phytophthora parasitica INRA-310] >gi|570330868|gb|ETO78816.1| hypothetical protein F444_06339 [Phytophthora parasitica P1976] >gi|570954616|gb|ETP19873.1| hypothetical protein F441_06283 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 417.927 bits (1073), Expect = 5.638e-141
Identity = 219/436 (50.23%), Postives = 286/436 (65.60%), Query Frame = 0
Query:    1 MALKLYTNPGNFRAFKILVAALYNGVDIDVVDLDLAAK-KRTDVLAKSPAGKVPVLETPQGLLFESNAIARYIARARRDTDLYGVSFFDSGLVDAWIDFAAQEVELPATLWVYPVFGYLPHNAAVTEKAKADLGAAMEILDNHLADKTYLVGEKVTLADITVASALVYPYKIVMSPEYRAQYPHVLRWFLTIVNQPHFRAVIGDVVLAEKELVPSGAPPALALPAKGAGKKEKKEKKEKAAAPKQEKKKEEAPAKTGEDLEEQLAKEEKKKAAEHPLKILDRESPSEFVMDTWKKTYSNARSYDQAMDEFWKVFDSLGYSLWFCNYQYNSELTKLFMTCNLVSGFVQRTDELRKWAFGCMWILGEDAPGKMEIRGLWLMRGQSDSYIKSANPDAEFYTWTKVPTPVSDEDKKKVQEYWCSDDSLAGLPVLDCKVFK 435
            M LKLYT PGN+R FK L+AA +NG+DI++ + D A   K  +  AK+PAGKVP+LET +G +FES AIA+YIAR R DT LYG +FF+SG VDAWIDF+A E+E+P   W+YP+ G+   NAA   KAK D+  A++ L+NHL  +TYLVGE++TLADI +ASALVYP+K V+  E+R  Y  V RWF T+VNQP F+AV+GDV L +  L   G          G    +K   K++ AAP     KEEAP               K K  EHPL +L+RE PS   +D WK  YSN ++   AM  FW+  D+ GYSLWFC+Y YNSE TK+FMTCN V GF+QR++ +RK+AFG M + G +   ++ I G WL RG S+ ++  ANPDAE+YTW K    ++DE K +V  YWC++D L G P+ D KVFK
Sbjct:    1 MVLKLYTYPGNYRVFKALIAAEFNGIDIELPEFDFAKDIKSKEFKAKTPAGKVPLLETEEGCIFESGAIAKYIARLRADTGLYGKTFFESGQVDAWIDFSAYELEIPLEAWLYPILGWGKFNAAALTKAKDDVKKALQTLENHLHLRTYLVGEQITLADIFIASALVYPFKFVLDKEFRKPYSAVNRWFSTLVNQPEFQAVVGDVPLIDVALTAEG-------DNSGKKAAKKDAPKKEKAAP-----KEEAP---------------KPKKVEHPLAVLNREKPSSLNLDAWKVQYSNTKNLADAMTWFWEHLDTEGYSLWFCDYNYNSENTKMFMTCNAVGGFLQRSEAMRKYAFGVMDVCGAEG-SEIIITGCWLFRGDSEKHMIEANPDAEYYTWKK--AELNDETKARVAAYWCNEDELEGKPIADSKVFK 406          
BLAST of EWM21126.1 vs. NCBI_GenBank
Match: gi|695388965|ref|XP_009519315.1| (hypothetical protein PHYSODRAFT_284839 [Phytophthora sojae] >gi|197320662|gb|ACH68459.1| calcium-dependent protein 1 [Phytophthora sojae] >gi|348684212|gb|EGZ24027.1| hypothetical protein PHYSODRAFT_284839 [Phytophthora sojae])

HSP 1 Score: 416.772 bits (1070), Expect = 2.059e-140
Identity = 212/436 (48.62%), Postives = 287/436 (65.83%), Query Frame = 0
Query:    1 MALKLYTNPGNFRAFKILVAALYNGVDIDVVDLDLAAK-KRTDVLAKSPAGKVPVLETPQGLLFESNAIARYIARARRDTDLYGVSFFDSGLVDAWIDFAAQEVELPATLWVYPVFGYLPHNAAVTEKAKADLGAAMEILDNHLADKTYLVGEKVTLADITVASALVYPYKIVMSPEYRAQYPHVLRWFLTIVNQPHFRAVIGDVVLAEKELVPSGAPPALALPAKGAGKKEKKEKKEKAAAPKQEKKKEEAPAKTGEDLEEQLAKEEKKKAAEHPLKILDRESPSEFVMDTWKKTYSNARSYDQAMDEFWKVFDSLGYSLWFCNYQYNSELTKLFMTCNLVSGFVQRTDELRKWAFGCMWILGEDAPGKMEIRGLWLMRGQSDSYIKSANPDAEFYTWTKVPTPVSDEDKKKVQEYWCSDDSLAGLPVLDCKVFK 435
            M  KLYT P N+R FK+L+AA YNGVDI++ + D+A   K  +  +K+P GKVP+LET +G +FES AIA+Y+AR R DT LYG +FF+SG VD+WIDF+A E+E+P   W+YP+ G+  +NA    KAKAD+  A++ L+NHL  +TYLVGE++TLADI +A+ALVYP+K V+  E+R  Y  V RWF T+VNQP F+AV+GDV L +           +AL A+  G    K+ K+ A   ++   KEEAP               K K  EHPL +L+RE PS   +D WK  YSN +    AM  FW+  D+ GYSLWFC+Y YN E TK+FMTCN V GF+QR++ +RK+AFG M + G +   ++ I G WL RG S+ ++  ANPDAE+YTWTK    ++DE K ++  YWC++D L G P+ D KVFK
Sbjct:    1 MVFKLYTYPANYRVFKVLIAAEYNGVDIELPEFDMATDLKSEEFQSKTPVGKVPILETEEGTIFESGAIAKYVARLRNDTGLYGKTFFESGQVDSWIDFSAYELEIPLQAWLYPILGWAKYNAEALTKAKADVKKALQTLENHLHLRTYLVGEQITLADIFIATALVYPFKFVLDKEFRKPYSAVNRWFATLVNQPEFQAVVGDVPLID-----------VALTAE--GDNSGKKAKKDAPKKEKAAPKEEAP---------------KPKKVEHPLAVLNREKPSSMNLDAWKVQYSNTKDLADAMKWFWEHLDTEGYSLWFCDYNYNKENTKMFMTCNAVGGFLQRSEAMRKYAFGVMDVCGAEG-SEIIITGCWLFRGDSEKHMVEANPDAEYYTWTKA--ELNDETKARIAAYWCNEDELEGKPIADSKVFK 405          
The following BLAST results are available for this feature:
BLAST of EWM21126.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101193|gb|EWM21126.1|0.000e+0100.00elongation factor 1 [Nannochloropsis gaditana][more]
gi|298714497|emb|CBJ27519.1|1.677e-16156.42eukaryotic elongation factor-1 B gamma [Ectocarpus... [more]
gi|325180920|emb|CCA15330.1|9.658e-14650.12calciumdependent protein 1 putative [Albugo laibac... [more]
gi|953492003|emb|CEG45580.1|5.690e-14448.39elongation factor 1 [Plasmopara halstedii][more]
gi|635367198|emb|CCI44608.1|2.226e-14348.50unnamed protein product [Albugo candida][more]
gi|301105367|ref|XP_002901767.1|9.165e-14350.69elongation factor 1-gamma, putative [Phytophthora ... [more]
gi|567964509|gb|ETK89994.1|1.593e-14251.15hypothetical protein L915_06152 [Phytophthora para... [more]
gi|570954614|gb|ETP19871.1|2.789e-14251.27hypothetical protein F441_06281 [Phytophthora para... [more]
gi|675165667|ref|XP_008891718.1|5.638e-14150.23hypothetical protein PPTG_02398 [Phytophthora para... [more]
gi|695388965|ref|XP_009519315.1|2.059e-14048.62hypothetical protein PHYSODRAFT_284839 [Phytophtho... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9563rna9563Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications