EWM21146.1, cds9522 (CDS) Nannochloropsis gaditana

Overview
NameEWM21146.1
Unique Namecds9522
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037254.1:159022..159224 -
Alignment locationKK037254.1:158168..158812 -
Alignment locationKK037254.1:158073..158091 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21146.1
Productprotein serine threonine kinase
Orig transcript idgnl|cribi|Naga_100319g9.4368.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:159022..159224 -
KK037254.1supercontigKK037254.1:158168..158812 -
KK037254.1supercontigKK037254.1:158073..158091 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0006464cellular protein modification process
GO:0006468protein phosphorylation
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0000166nucleotide binding
GO:0004672protein kinase activity
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
IPR008271Ser/Thr_kinase_AS
IPR017441Protein_kinase_ATP_BS
IPR020636Ca/CaM-dep_Ca-dep_prot_Kinase
IPR000719Prot_kinase_dom
IPR002290Ser/Thr_dual-sp_kinase
Homology
BLAST of EWM21146.1 vs. NCBI_GenBank
Match: gi|585101214|gb|EWM21146.1| (protein serine threonine kinase [Nannochloropsis gaditana])

HSP 1 Score: 593.193 bits (1528), Expect = 0.000e+0
Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0
Query:    1 MIPYYQGYQHRGDTDDSNDGSAGSEDRQGGQGAEERQVEAHSGPLMMLPPSLPAEPTVPSRDMEAFNRLYALHEEIGRGAFSVVHRCTNRITGEDFAVKLMDLRPLQLRENFDQARLRREVEIMQRLEHPHIIRLEGVFEDASTLVLVLEYARGTELFDSILQKKRYTEEEARPIFVQVAHALAYLHRLHIVHRDVKPENVILLDALSPEGFYPFAKLLDFGLSKMIGQDDGSAARTFVGTPCYLAPEVEARAYGRGGGYGTKVDCWSLGAVLYVMLVARFPETCSGA 288
            MIPYYQGYQHRGDTDDSNDGSAGSEDRQGGQGAEERQVEAHSGPLMMLPPSLPAEPTVPSRDMEAFNRLYALHEEIGRGAFSVVHRCTNRITGEDFAVKLMDLRPLQLRENFDQARLRREVEIMQRLEHPHIIRLEGVFEDASTLVLVLEYARGTELFDSILQKKRYTEEEARPIFVQVAHALAYLHRLHIVHRDVKPENVILLDALSPEGFYPFAKLLDFGLSKMIGQDDGSAARTFVGTPCYLAPEVEARAYGRGGGYGTKVDCWSLGAVLYVMLVARFPETCSGA
Sbjct:    1 MIPYYQGYQHRGDTDDSNDGSAGSEDRQGGQGAEERQVEAHSGPLMMLPPSLPAEPTVPSRDMEAFNRLYALHEEIGRGAFSVVHRCTNRITGEDFAVKLMDLRPLQLRENFDQARLRREVEIMQRLEHPHIIRLEGVFEDASTLVLVLEYARGTELFDSILQKKRYTEEEARPIFVQVAHALAYLHRLHIVHRDVKPENVILLDALSPEGFYPFAKLLDFGLSKMIGQDDGSAARTFVGTPCYLAPEVEARAYGRGGGYGTKVDCWSLGAVLYVMLVARFPETCSGA 288          
BLAST of EWM21146.1 vs. NCBI_GenBank
Match: gi|298715487|emb|CBJ28057.1| (calcium/ calmodulin-dependent protein kinase 1 [Ectocarpus siliculosus])

HSP 1 Score: 265.774 bits (678), Expect = 6.286e-78
Identity = 136/242 (56.20%), Postives = 164/242 (67.77%), Query Frame = 0
Query:   61 RDMEAFNRLYALHEEIGRGAFSVVHRCT------------NRITGED------FAVKLMDLRPLQLRENFDQARLRREVEIMQRLEHPHIIRLEGVFEDASTLVLVLEYARGTELFDSILQKKRYTEEEARPIFVQVAHALAYLHRLHIVHRDVKPENVILLDALSPEGFYPFAKLLDFGLSKMIGQDD-GSAARTFVGTPCYLAPEVEARAYGRGGGYGTKVDCWSLGAVLYVMLVARFPE 283
            +D + F+  Y L E++G GA   V +C               + GED      +A K++DLRP +LRE F   RL REV+IM+RL HP+II L    +    LVL+LEYA G ELFD+IL K  ++E EARP+FVQVA AL Y+H   IVHRDVKPENV+++D  +P+G YP AKLLDFGLSK I  D  GS ARTFVGTP YLAPEVE R  G+G  YGT VDCWSLGA+LYVMLVARFPE
Sbjct:   31 QDSDDFSSRYELLEQVGSGASGTVWKCRLAPGNGPPKRAGGPVAGEDPVPGRIYAAKIIDLRPFKLRERFSMQRLMREVDIMRRLRHPNIIHLVEALDTPEQLVLILEYAPGVELFDAILSKASFSESEARPVFVQVARALQYMHSKSIVHRDVKPENVMIIDRTAPDGLYPEAKLLDFGLSKAIDADTGGSVARTFVGTPSYLAPEVEERKGGKGKPYGTPVDCWSLGAMLYVMLVARFPE 272          
BLAST of EWM21146.1 vs. NCBI_GenBank
Match: gi|676392753|ref|XP_009039654.1| (hypothetical protein AURANDRAFT_30694, partial [Aureococcus anophagefferens] >gi|323449634|gb|EGB05520.1| hypothetical protein AURANDRAFT_30694, partial [Aureococcus anophagefferens])

HSP 1 Score: 196.823 bits (499), Expect = 1.345e-57
Identity = 115/233 (49.36%), Postives = 143/233 (61.37%), Query Frame = 0
Query:   66 FNRLYALHEEIGRGAFSVVHRCTNRITG-EDFAVKLMDLRPLQLRENFDQARLRREVEIMQRLEHPHIIRLEGVFEDASTLVLVLEYARGTELFDSILQKKRYTEEEARPIFVQVAHALAYLHRLHIVHRDVKPENVILLDALSPEGFYPFAKLLDFGLSKMI-----GQDD------GSAARTFVGTPCYLAPEVEARAYGRGGG---YGTKVDCWSLGAVLYVMLVARFPE 283
            F+  Y L   IG GAFSVV    +R  G     VK +D+RPL+LR NF   RL RE  I+ R+ H +++R  G +E    L +VLE A G ELF+ IL+++   E +ARP+  Q+  ALAYLH   + HRDVKPENV+    +  +G    A L+DFGLSK+I     G DD       SA RTFVGTPCYLAPE+EA   G  G    YG +VD WSLGAVL+V LVARFPE
Sbjct:   52 FDARYELLAPIGSGAFSVVRGVKSRSGGGPPLCVKTVDVRPLRLRPNFSPRRLLREATILSRVAHANVVRYVGCYEGPDALRVVLERAPGRELFEVILERRSLPEADARPVVAQLTSALAYLHANSVAHRDVKPENVL----VDRQGDEWRATLIDFGLSKVIKTTPSGDDDDLPVLESSAGRTFVGTPCYLAPEIEAIHRGGEGAPRHYGVEVDAWSLGAVLHVSLVARFPE 280          
BLAST of EWM21146.1 vs. NCBI_GenBank
Match: gi|676384927|ref|XP_009035742.1| (hypothetical protein AURANDRAFT_12663, partial [Aureococcus anophagefferens] >gi|323453827|gb|EGB09698.1| hypothetical protein AURANDRAFT_12663, partial [Aureococcus anophagefferens])

HSP 1 Score: 187.193 bits (474), Expect = 8.585e-55
Identity = 106/213 (49.77%), Postives = 137/213 (64.32%), Query Frame = 0
Query:   76 IGRGAFSVVHRCTNRITGEDFAVKLMDLRPLQLR--ENFDQARLRREVEIMQRLEHPHIIRLEGVFEDASTLVLVLEYARGTELFDSILQKKRYTEEEARPIFVQVAHALAYLHRLHIVHRDVKPENVILLDALSPEGFYPFAKLLDFGLSKMIGQ-DDGSAARTFVGTPCYLAPEVEA---RAYGRGGGYGTKVDCWSLGAVLYVMLVARFP 282
            +GRGA  VV +   R  G   AVK MDLR L++   + F   +LRREV++++ LEH +I+ L G F D  T+ LV+E   G ELFD+IL +  YTE +ARPIFVQ+  A+ Y+H+ +++HRD+KPENV+    ++ +G     KL+DFGLSK +     GS A T VGTP YLAPEVE    RA      Y  KVD WSLG  LYVMLVARFP
Sbjct:    1 LGRGASGVVRKAYRRSDGLGVAVKTMDLRALRMHGGDAFKIKKLRREVDVLRTLEHENIVHLYGAFGDDDTVRLVMELVEGRELFDAILSRGHYTEADARPIFVQLLKAVDYMHQRNVIHRDLKPENVL----VTGDG-EDVVKLVDFGLSKHVASAHGGSRAHTMVGTPSYLAPEVELQKPRARDGSMAYDAKVDSWSLGVTLYVMLVARFP 208          
BLAST of EWM21146.1 vs. NCBI_GenBank
Match: gi|1200225775|gb|OUT49837.1| (hypothetical protein CBB69_02685 [Phycisphaera sp. TMED9])

HSP 1 Score: 189.119 bits (479), Expect = 4.017e-52
Identity = 107/232 (46.12%), Postives = 135/232 (58.19%), Query Frame = 0
Query:   74 EEIGRGAFSVVHRCTNRITGEDFAVKLMDLRPLQLREN--FDQARLRREVEIMQRLEHPHIIRLEGVFEDASTLVLVLEYARGTELFDSILQKKRYTEEEARPIFVQVAHALAYLHRLHIVHRDVKPENVILLDALSPEGFYPFAKLLDFGLSKMIGQD--DGSAARTFVGTPCYLAPEVEARAYGR-------------------GGGYGTKVDCWSLGAVLYVMLVARFP 282
            +E+GRGA  VV R T R  G   AVK MDLR L+L     F  ARLRREV++++ L HP I+RL G + D  T++LV+E   G ELFD+IL + ++ E  AR IF ++  A+AY+H  +I+HRDVKPENV++      E      KL+DFGLSK++       S A T VGTP YLAPE+E                          G Y  KVD WSLG  LYVMLVARFP
Sbjct:   25 DEVGRGASGVVRRATRRSDGLPVAVKTMDLRALRLAGGGGFSIARLRREVDVLRSLRHPAIVRLYGAYGDQDTVLLVMELVEGRELFDAILSRGKFDEPSARNIFSKLCQAVAYMHARNIIHRDVKPENVLVTGTNEDE-----VKLVDFGLSKLVAGSMVGASRAHTMVGTPSYLAPEIENMKTKTHSLDLDTISKEEDLDLSDGTGAYDNKVDAWSLGVTLYVMLVARFP 251          
BLAST of EWM21146.1 vs. NCBI_GenBank
Match: gi|66808595|ref|XP_638020.1| (hypothetical protein DDB_G0285963 [Dictyostelium discoideum AX4] >gi|74996805|sp|Q54MH0.1|FHKD_DICDI RecName: Full=Probable serine/threonine-protein kinase fhkD; AltName: Full=Forkhead-associated kinase protein D >gi|60466461|gb|EAL64516.1| hypothetical protein DDB_G0285963 [Dictyostelium discoideum AX4])

HSP 1 Score: 182.956 bits (463), Expect = 5.421e-49
Identity = 101/229 (44.10%), Postives = 142/229 (62.01%), Query Frame = 0
Query:   64 EAFNRLYALHEEIGRGAFSVVHRCTNRITGEDFAVKLMDLRPLQLRENFDQARLRR----EVEIMQRLEHPHIIRLEGVFEDASTLVLVLEYARGTELFDSILQKKRYTEEEARPIFVQVAHALAYLHRLHIVHRDVKPENVILLDALSPEGFYPFAKLLDFGLSKMIGQDDGSAARTFVGTPCYLAPEVEARA-YGRGG-----GYGTKVDCWSLGAVLYVMLVARFP 282
            E  N+ Y++   +G G FSVV RC  R TGE FAVK++D +       + Q + RR    EVEI+Q+++HP+II +  + +      +VLE A G ELF+ I QK R++E EA+  F Q+  A++YLH L+I HRD+KPEN IL+ A+S  G     K+ DFGL+K+IG+ +   A T  GTP Y+APE+     +G GG     GYG +VD WSLG +LY++L  R P
Sbjct:  193 EEMNKKYSIQGILGTGNFSVVKRCIRRDTGEVFAVKIIDKKKF-----WSQTKTRRQMESEVEILQKIKHPNIISIIDIVQSDRYFYIVLELATGGELFEKIKQKGRFSEPEAKDTFKQILEAVSYLHDLNISHRDLKPEN-ILISAVS-HGKSSVIKVTDFGLAKIIGEKE--MATTLCGTPLYVAPEIIRNCLHGDGGAQVNTGYGKEVDVWSLGCILYILLSGRPP 412          
BLAST of EWM21146.1 vs. NCBI_GenBank
Match: gi|831792031|ref|XP_012759910.1| (hypothetical protein SAMD00019534_035640 [Acytostelium subglobosum LB1] >gi|735994700|dbj|GAM20389.1| hypothetical protein SAMD00019534_035640 [Acytostelium subglobosum LB1])

HSP 1 Score: 179.104 bits (453), Expect = 2.922e-48
Identity = 94/220 (42.73%), Postives = 136/220 (61.82%), Query Frame = 0
Query:   70 YALHEEIGRGAFSVVHRCTNRITGEDFAVKLMDLRP-LQLRENFDQARLRREVEIMQRLEHPHIIRLEGVFEDASTLVLVLEYARGTELFDSILQKKRYTEEEARPIFVQVAHALAYLHRLHIVHRDVKPENVILLDALSPEGFYPFAKLLDFGLSKMIGQDDGSAARTFVGTPCYLAPEV------EARAYGRGGGYGTKVDCWSLGAVLYVMLVARFP 282
            Y L   +G G FSVV RCT R TGE FAVK++D +    +    +Q     E+ I+++++HP+II +  +FE    + +VLE A G ELFD I QK R++E EA+  F Q+ +A++YLH+L+I HRD+KPEN++L D  S        K+ DFGL+K+IG+ +   A T  GTP Y+APE+      +     +  GYG +VD WSLG +LY++L  R P
Sbjct:  185 YILQGILGTGNFSVVKRCTKRDTGESFAVKIIDKKKYWHISSTRNQTE--SEISILKQIKHPNIISIIEIFETQQYIYIVLELATGGELFDKIRQKGRFSEPEAKGTFKQILNAVSYLHQLNITHRDLKPENILLGDQSS-----SVIKITDFGLAKIIGEKE--IATTLCGTPLYVAPEIIKNCLYKDDKSDKNIGYGKEVDAWSLGCILYILLCGRPP 395          
BLAST of EWM21146.1 vs. NCBI_GenBank
Match: gi|1013935599|gb|KYQ89301.1| (putative protein serine/threonine kinase [Dictyostelium lacteum])

HSP 1 Score: 179.104 bits (453), Expect = 4.239e-48
Identity = 95/231 (41.13%), Postives = 144/231 (62.34%), Query Frame = 0
Query:   60 SRDMEAFNRLYALHEEIGRGAFSVVHRCTNRITGEDFAVKLMD-LRPLQLRENFDQARLRREVEIMQRLEHPHIIRLEGVFEDASTLVLVLEYARGTELFDSILQKKRYTEEEARPIFVQVAHALAYLHRLHIVHRDVKPENVILLDALSPEGFYPFAKLLDFGLSKMIGQDDGSAARTFVGTPCYLAPEV-------EARAYGRGGGYGTKVDCWSLGAVLYVMLVARFP 282
            S D+E  N+ Y +   +G G FSVV +C  + TGE FAVK++D ++   L +N +Q     E+ I+++++HP+II +  +F+    L +VLE A G ELFD I +K R++E EA+ +F Q+  A+ YLH+L+I HRD+KPEN+++     PEG     K+ DFGL+K+IG+ +   A T  GTP Y+APE+       +    G   GYG +VD WSLG +LY++L  + P
Sbjct:  158 SDDIE-INKHYIIQGMLGTGNFSVVKKCIKKDTGESFAVKIIDKMKYWHLSKNKNQTN--SEIAILKKIKHPNIISIIEIFDTERYLYIVLELATGGELFDKIKEKIRFSEPEAKDVFKQILAAVCYLHQLNISHRDLKPENILI--GKGPEG-KQIIKITDFGLAKIIGEKE--IATTLCGTPLYVAPEIIKSCLMGKNTQNGEPHGYGKEVDAWSLGCILYILLSGKPP 380          
BLAST of EWM21146.1 vs. NCBI_GenBank
Match: gi|470249771|ref|XP_004367117.1| (putative protein serine/threonine kinase [Dictyostelium fasciculatum] >gi|328871764|gb|EGG20134.1| putative protein serine/threonine kinase [Dictyostelium fasciculatum])

HSP 1 Score: 179.489 bits (454), Expect = 2.661e-47
Identity = 97/226 (42.92%), Postives = 139/226 (61.50%), Query Frame = 0
Query:   68 RLYALHEEIGRGAFSVVHRCTNRITGEDFAVKLMDLRPL-QLRENFDQARLRREVEIMQRLEHPHIIRLEGVFEDASTLVLVLEYARGTELFDSILQKKRYTEEEARPIFVQVAHALAYLHRLHIVHRDVKPENVILLDALSPEGFYPFAKLLDFGLSKMIGQDDGSAARTFVGTPCYLAPEVEARAY-----GRGG-----GYGTKVDCWSLGAVLYVMLVARFP 282
            + Y +H  +G G FSVV +CT R TGE+FAVK++D +    L  + +Q     E+ I+++++HP+II +  +F+    L +VLE A G ELFD I QK R+ E EA+ +F Q+  A++YLH+L+I HRD+KPEN+  L   SP    P  K+ DFGL+K+IG+ +   A T  GTP Y+APE+          G G      GYG +VD WSLG +LY++L  R P
Sbjct:  161 KFYIIHGILGTGNFSVVKKCTKRDTGENFAVKIIDKKKYWHLSSSRNQTE--SEINILKQIKHPNIISIFEIFDTERYLYIVLELATGGELFDKIKQKGRFQEPEAKDVFKQILSAVSYLHQLNISHRDLKPENI--LYGSSPNSGEPIIKITDFGLAKIIGEKE--MATTLCGTPLYVAPEIIKNCLMGNMPGSGDKKEKMGYGKEVDVWSLGCILYILLSGRPP 380          
BLAST of EWM21146.1 vs. NCBI_GenBank
Match: gi|857977772|emb|CEO96321.1| (hypothetical protein PBRA_004992 [Plasmodiophora brassicae])

HSP 1 Score: 172.94 bits (437), Expect = 3.740e-47
Identity = 110/294 (37.41%), Postives = 163/294 (55.44%), Query Frame = 0
Query:   15 DDSNDGSAGSEDRQGGQGAEERQVEAHSGPLMMLPPSLPAEPTVPS---------------RDMEAFNRLYALHEE---IGRGAFSVVHRCTNRITGEDFAVKLMDLRPLQLRENFDQARLRREVEIMQRLEHPHIIRLEGVFEDASTLVLVLEYARGTELFDSILQKKRYTEEEARPIFVQVAHALAYLHRLHIVHRDVKPENVILLDALSPEGFYPFAKLLDFGLSKMIGQDDGSAARTFVGTPCYLAPE-VEARAYGRGG-------GYGTKVDCWSLGAVLYVMLVARFP 282
            +D++      +D + G+G  +R V  H   + ++PP+   + T P                R ++  N  +A +E+   +G+GA++VV+RC +R TG +FA+K++D +   +        L  EV I+ RL HPHII+L   +E  + L LVLE   G ELFD I++  RY E++AR IF Q+  A++Y+H   IVHRD+KPENV+L    SP       K+ DFGLS+++G+     A+T  GT  YLAPE + A+A    G       GYG  VD WSLG +LYV+L    P
Sbjct:   85 EDTSTNGTFVDDLKIGKG--KRVVVTHGSEVTLIPPN--KDGTRPRISFHVFFKEDEKQRHRQLQETNSPFAHYEQKELLGQGAYAVVYRCIHRATGNEFALKIIDKKKFAVSGPTRTNALLAEVHILSRLSHPHIIKLVDAYETNAYLYLVLELVTGGELFDEIIKIGRYPEDDARVIFTQMVGAVSYMHEQGIVHRDLKPENVLL---RSPGALN--IKISDFGLSRIVGES--GLAQTLCGTANYLAPEIITAQAIPASGLTPAEVVGYGKAVDMWSLGVILYVILSGTAP 367          
The following BLAST results are available for this feature:
BLAST of EWM21146.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101214|gb|EWM21146.1|0.000e+0100.00protein serine threonine kinase [Nannochloropsis g... [more]
gi|298715487|emb|CBJ28057.1|6.286e-7856.20calcium/ calmodulin-dependent protein kinase 1 [Ec... [more]
gi|676392753|ref|XP_009039654.1|1.345e-5749.36hypothetical protein AURANDRAFT_30694, partial [Au... [more]
gi|676384927|ref|XP_009035742.1|8.585e-5549.77hypothetical protein AURANDRAFT_12663, partial [Au... [more]
gi|1200225775|gb|OUT49837.1|4.017e-5246.12hypothetical protein CBB69_02685 [Phycisphaera sp.... [more]
gi|66808595|ref|XP_638020.1|5.421e-4944.10hypothetical protein DDB_G0285963 [Dictyostelium d... [more]
gi|831792031|ref|XP_012759910.1|2.922e-4842.73hypothetical protein SAMD00019534_035640 [Acytoste... [more]
gi|1013935599|gb|KYQ89301.1|4.239e-4841.13putative protein serine/threonine kinase [Dictyost... [more]
gi|470249771|ref|XP_004367117.1|2.661e-4742.92putative protein serine/threonine kinase [Dictyost... [more]
gi|857977772|emb|CEO96321.1|3.740e-4737.41hypothetical protein PBRA_004992 [Plasmodiophora b... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9553rna9553Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications