EWM21157.1, cds9518 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21157.1 vs. NCBI_GenBank
Match: gi|553179280|ref|XP_005852675.1| (queuosine biosynthesis protein [Nannochloropsis gaditana CCMP526] >gi|422295854|gb|EKU23153.1| queuosine biosynthesis protein [Nannochloropsis gaditana CCMP526] >gi|585101227|gb|EWM21157.1| 6-pyruvoyl tetrahydropterin synthase/QueD family protein [Nannochloropsis gaditana]) HSP 1 Score: 342.428 bits (877), Expect = 2.358e-119 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0
Query: 1 MLVGKALPVLFSVFLVITTLINIVVDAASGFPFSLGIRDSIMIAHSFKGEQFGPAQNIHGATYTVDVTFRSKNLVPKNNWVIDIGEASTALSRILSKYNFKNLDQVFPEGENTTTEFMCRAIHRDLAAHFCTNRAKSKEERFKGSICVKLWESHKAWACYEAIV 164
MLVGKALPVLFSVFLVITTLINIVVDAASGFPFSLGIRDSIMIAHSFKGEQFGPAQNIHGATYTVDVTFRSKNLVPKNNWVIDIGEASTALSRILSKYNFKNLDQVFPEGENTTTEFMCRAIHRDLAAHFCTNRAKSKEERFKGSICVKLWESHKAWACYEAIV
Sbjct: 1 MLVGKALPVLFSVFLVITTLINIVVDAASGFPFSLGIRDSIMIAHSFKGEQFGPAQNIHGATYTVDVTFRSKNLVPKNNWVIDIGEASTALSRILSKYNFKNLDQVFPEGENTTTEFMCRAIHRDLAAHFCTNRAKSKEERFKGSICVKLWESHKAWACYEAIV 164
BLAST of EWM21157.1 vs. NCBI_GenBank
Match: gi|299471326|emb|CBN79282.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 175.637 bits (444), Expect = 2.031e-53 Identity = 83/132 (62.88%), Postives = 102/132 (77.27%), Query Frame = 0
Query: 33 FSLGIRDSIMIAHSFKGEQFGPAQNIHGATYTVDVTFRSKNLVPKNNWVIDIGEASTALSRILSKYNFKNLDQVFPEGENTTTEFMCRAIHRDLAAHFCTNRAKSKEERFKGSICVKLWESHKAWACYEAIV 164
+SLGIRDSIMIAHSF+G QFGPAQ +HGATYTVD F++ LV K+NWV+DIG AS L+ +LSKYNFKNL+++FP G+NTTTEFMC+ I +LAA C + F G++C+KLWESHKAW CYE V
Sbjct: 33 YSLGIRDSIMIAHSFEGPQFGPAQEMHGATYTVDAEFKTDALVEKSNWVVDIGAASEMLAAVLSKYNFKNLNEIFP-GQNTTTEFMCKVIFDELAAK-CG-------KDFHGTLCIKLWESHKAWGCYEGDV 155
BLAST of EWM21157.1 vs. NCBI_GenBank
Match: gi|551658564|ref|XP_005832052.1| (hypothetical protein GUITHDRAFT_152839 [Guillardia theta CCMP2712] >gi|428176186|gb|EKX45072.1| hypothetical protein GUITHDRAFT_152839 [Guillardia theta CCMP2712]) HSP 1 Score: 168.318 bits (425), Expect = 4.334e-50 Identity = 79/133 (59.40%), Postives = 97/133 (72.93%), Query Frame = 0
Query: 28 ASGFPFSLGIRDSIMIAHSFKGEQFGPAQNIHGATYTVDVTFRSKNLVPKNNWVIDIGEASTALSRILSKYNFKNLDQVFPEGENTTTEFMCRAIHRDLAAHFCTNRAKSKEERFKGSICVKLWESHKAWACY 160
G +SLG+RDSIMIAHSF G++FGPAQN+HGATYTVDV F ++L P+ NWV+DIGE T L ++L +YNFKNL+++FP GENTTTEFMC+ I L + +FKGSI VKLWESH AWA Y
Sbjct: 58 GGGERYSLGLRDSIMIAHSFTGKEFGPAQNMHGATYTVDVEFHVESLAPRLNWVLDIGEGMTMLKKVLGEYNFKNLNELFP-GENTTTEFMCKKIFEGLCVEL--------KGKFKGSITVKLWESHSAWASY 181
BLAST of EWM21157.1 vs. NCBI_GenBank
Match: gi|219118272|ref|XP_002179914.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408967|gb|EEC48900.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 161.77 bits (408), Expect = 5.022e-48 Identity = 80/155 (51.61%), Postives = 101/155 (65.16%), Query Frame = 0
Query: 12 SVFLVITTLINIVVDAA-SGFPFSLGIRDSIMIAHSF-KGEQFGPAQNIHGATYTVDVTFRSKNLVPKNNWVIDIGEASTALSRILSKYNFKNLDQVFPEGENTTTEFMCRAIHRDLAAHFCTNRAKSKEERFKGSICVKLWESHKAWACYEAIV 164
S+FL + ++ + +G F LGIRDS+MIAHSF + FGPA +HGATYT DV F L P NWV+DIG+AS L +L+KYN KNLD+VFP G+ TTTEFMC+ IH DL + + + F G +CVKLWESHKAWA Y +V
Sbjct: 6 SLFLGVYAFYSVCIRLVFAGRSFRLGIRDSLMIAHSFHRHPAFGPAGGMHGATYTCDVEFSKDTLDPDTNWVMDIGKASELLCTVLAKYNLKNLDEVFPNGQLTTTEFMCKQIHMDL-----VDLIRREFHDFHGEVCVKLWESHKAWAAYSGVV 155
BLAST of EWM21157.1 vs. NCBI_GenBank
Match: gi|1072230867|gb|OEU15600.1| (tetrahydrobiopterin biosynthesis enzymes-like protein, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 155.221 bits (391), Expect = 9.144e-46 Identity = 76/132 (57.58%), Postives = 94/132 (71.21%), Query Frame = 0
Query: 33 FSLGIRDSIMIAHSFKGE-QFGPAQNIHGATYTVDVTFRSKNLVPKNNWVIDIGEASTALSRILSKYNFKNLDQVFPEGENTTTEFMCRAIHRDLAAHFCTNRAKSKEERFKGSICVKLWESHKAWACYEAI 163
FSLG++DS+MIAHSF G FGPA +HGATYT DV F SK L P+ NWVIDIG+A LS++LS+YN KNLD VFP+ TTTEFMC+ IH D+ + + + FKG++ VKLWESHKAWA Y +
Sbjct: 1 FSLGVKDSLMIAHSFHGHPSFGPAGGLHGATYTADVEFLSKELHPEFNWVIDIGKALDILSKVLSRYNLKNLDDVFPDNIMTTTEFMCKQIHDDIC-----RLLEDECKDFKGAVRVKLWESHKAWATYTGL 127
BLAST of EWM21157.1 vs. NCBI_GenBank
Match: gi|545708076|ref|XP_005706351.1| (6-pyruvoyl tetrahydropterin synthase [Galdieria sulphuraria] >gi|452822815|gb|EME29831.1| 6-pyruvoyl tetrahydropterin synthase [Galdieria sulphuraria]) HSP 1 Score: 149.443 bits (376), Expect = 1.381e-43 Identity = 72/131 (54.96%), Postives = 94/131 (71.76%), Query Frame = 0
Query: 33 FSLGIRDSIMIAHSFKGEQFGPAQNIHGATYTVDVTFRSKNLVPKNNWVIDIGEASTALSRILSKYNFKNLDQVFP-EGENTTTEFMCRAIHRDLAAHFCTNRAKSKEERFKGSICVKLWESHKAWACYEA 162
++LG+RDS MIAHSF+GE FGPAQ +HGATYTVD FRS NL P+ NWVIDIGEA+ L +LS YN++NLDQ+ +G+NTTTE++ R IH + +K+K F+G + V L ES +AWA YE+
Sbjct: 2 YTLGVRDSFMIAHSFQGEAFGPAQGLHGATYTVDCEFRSTNLQPQLNWVIDIGEATQILKDVLSLYNYRNLDQLEEFQGQNTTTEYLARVIHDKVL-------SKAKMLGFQGILKVSLMESFRAWASYES 125
BLAST of EWM21157.1 vs. NCBI_GenBank
Match: gi|1189382632|gb|OSX70073.1| (hypothetical protein BU14_0930s0005 [Porphyra umbilicalis]) HSP 1 Score: 140.198 bits (352), Expect = 7.693e-40 Identity = 66/131 (50.38%), Postives = 92/131 (70.23%), Query Frame = 0
Query: 31 FPFSLGIRDSIMIAHSFKGEQFGPAQNIHGATYTVDVTFRSKNLVPKNNWVIDIGEASTALSRILSKYNFKNLDQVFP-EGENTTTEFMCRAIHRDLAAHFCTNRAKSKEERFKGSICVKLWESHKAWACY 160
PFS+G+R+S+MIAHSFKGE+FGPAQ HGATYT+D + +K LV NWV++I +A+ AL +++++N++NLD+V +G+NTTTEF+ AIH LA + F G++ V L ESHKAWA Y
Sbjct: 1 MPFSVGVRESLMIAHSFKGEEFGPAQRTHGATYTIDAEWSAKELVSGVNWVLNIADAADALEAVVAEWNYRNLDEVAAFDGQNTTTEFLSHAIHSALAKRLPS---------FVGTLKVTLQESHKAWASY 122
BLAST of EWM21157.1 vs. NCBI_GenBank
Match: gi|397629228|gb|EJK69264.1| (hypothetical protein THAOC_09485, partial [Thalassiosira oceanica]) HSP 1 Score: 140.584 bits (353), Expect = 7.906e-39 Identity = 72/136 (52.94%), Postives = 90/136 (66.18%), Query Frame = 0
Query: 31 FPFSLGIRDSIMIAHSFKGE-QFGPAQNIHGATYTVDVTFRSKNLVPKNNWVIDIGEASTALSRILSKYNFKNLDQVFPEGENTTTEFMCRAIHRDLAAHFCTNRAK---SKEERFKGSICVKLWESHKAWACYEA 162
PF+L IRDSIMIAHSF G FGPA +HGATYTVDV F S+ L P+ NWVIDIG AS ++ +L KYN++NLD VF + TTTEFMC+ IH + R S + F+G + V L+ESHKAWA ++
Sbjct: 84 LPFTLAIRDSIMIAHSFHGHPSFGPAGGLHGATYTVDVEFASEALHPECNWVIDIGLASDLVADVLKKYNYQNLDVVFGKKIMTTTEFMCKEIHTRVVERLREKRQSEDGSDDNDFRGWVKVTLFESHKAWASFDG 219
BLAST of EWM21157.1 vs. NCBI_GenBank
Match: gi|224000597|ref|XP_002289971.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220975179|gb|EED93508.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 138.272 bits (347), Expect = 3.045e-38 Identity = 69/133 (51.88%), Postives = 86/133 (64.66%), Query Frame = 0
Query: 31 FPFSLGIRDSIMIAHSFKGE-QFGPAQNIHGATYTVDVTFRSKNLVPKNNWVIDIGEASTALSRILSKYNFKNLDQVFPEGENTTTEFMCRAIHRDLAAHFCTNRAKSKEERFKGSICVKLWESHKAWACYEA 162
P +L IRDS+MIAHSF FGPA +HGATYTVDV F S L + NWVIDIG AS ++ +L++YN+KNLD+VF + TTTEFMCRAI + + + F+G I V LWESHKAW +E
Sbjct: 57 LPHTLTIRDSLMIAHSFHSHPSFGPAGGLHGATYTVDVEFASSTLHKECNWVIDIGVASAMVAEVLTEYNYKNLDEVFGDNVMTTTEFMCRAIFDGVVKKLKERYSDIDVDHFEGWIKVTLWESHKAWGSFEG 189
BLAST of EWM21157.1 vs. NCBI_GenBank
Match: gi|517699988|ref|WP_018870196.1| (MULTISPECIES: 6-carboxytetrahydropterin synthase [Thioalkalivibrio] >gi|1145562242|gb|OOC10732.1| hypothetical protein B1A74_04015 [Thioalkalivibrio halophilus]) HSP 1 Score: 131.339 bits (329), Expect = 2.233e-36 Identity = 69/131 (52.67%), Postives = 84/131 (64.12%), Query Frame = 0
Query: 33 FSLGIRDSIMIAHSFKGEQFGPAQNIHGATYTVDVTFRSKNLVPKNNWVIDIGEASTALSRILSKYNFKNLDQVFP-EGENTTTEFMCRAIHRDLAAHFCTNRAKSKEERFKGSICVKLWESHKAWACYEA 162
+SL +RD MIAHSF GE FGPAQN+HGATY VDVTFR L + V+DIG A L IL++ N++NLD EG+NTTTEF+ RAIH +A R + R ++CV L ESH AWA YEA
Sbjct: 2 YSLNVRDHFMIAHSFAGEVFGPAQNLHGATYVVDVTFRRAEL-DDDGLVVDIGRAGEVLRSILAELNYQNLDDRPEFEGQNTTTEFLARAIHGRIATAIHEERLGAS-ARGLDAVCVTLHESHVAWAAYEA 130 The following BLAST results are available for this feature:
BLAST of EWM21157.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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