EWM21167.1, cds9515 (CDS) Nannochloropsis gaditana

Overview
NameEWM21167.1
Unique Namecds9515
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037254.1:140648..142861 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21167.1
Productdead deah box rna
Orig transcript idgnl|cribi|Naga_100108g14.7752.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:140648..142861 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
GO:0003723RNA binding
GO:0004386helicase activity
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR011545DEAD/DEAH_box_helicase_dom
IPR012562GUCT
IPR027417P-loop_NTPase
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
Homology
BLAST of EWM21167.1 vs. NCBI_GenBank
Match: gi|585101237|gb|EWM21167.1| (dead deah box rna [Nannochloropsis gaditana])

HSP 1 Score: 1507.66 bits (3902), Expect = 0.000e+0
Identity = 737/737 (100.00%), Postives = 737/737 (100.00%), Query Frame = 0
Query:    1 MARILHPLRTHSPPRTEIKACKNSMGKKDKISLAENAMDTTDAVIVTTSKKDKSSRKKKNGVAEEEALTDSSAQSASVVEEDSPNKKRKIKGSQEGADGAGGEKKKKKRAKPEESDAAVKDSAKKTKKCKTQASETADADPNALSNFKISQATCTRLEARGIKSLFPIQSMTLQKILDGCDLIGRARTGCGKTLAFALPVVELIGDEREERGAPPKVLVLAPTRELAKQVADEFEACAPATLRSVCIYGGAPYRPQEEALRRGVQVVVGTPGRILDHIERGTLKLSGLRFLILDEADSMLDMGFKDDIQKVCDAMGQDSHQRRQVLLFSATLPPWVQKVAQQYMRKDKLVQVDLVQGEDAKASTDVRHVAIPCHWSSMPSTVADCLAVYGGSNKARTIVFCETKKECNELVVNPVIKTECAALHGDIPQAQRETTLKAFREGRVRVLVATDVAARGLDMTVDLVVQNKPPVTASGRTDVETYVHRSGRTGRAGRKGICVTLFSPKYRFAVKEIEGAVGNKFEWAGAPQPADIVAASALAAMEDVANVDDKVFPLFQAAAAKLVEEMGAEEALAAALACLTGHTKELRSRSLLSNSDDYVTCQFQADQPIMSTGYVWTALRNALPQEVTEDIRGMQLTADNTGAVFDVPSKYMKTSMKRAVEENPFLTVCKTLPEIKQPRGVGGGGFSMGGRGSGFGGRAGSGFGGRGRGGGFGGRGRGGGFGGRGRGRGGGGGRGRW 737
            MARILHPLRTHSPPRTEIKACKNSMGKKDKISLAENAMDTTDAVIVTTSKKDKSSRKKKNGVAEEEALTDSSAQSASVVEEDSPNKKRKIKGSQEGADGAGGEKKKKKRAKPEESDAAVKDSAKKTKKCKTQASETADADPNALSNFKISQATCTRLEARGIKSLFPIQSMTLQKILDGCDLIGRARTGCGKTLAFALPVVELIGDEREERGAPPKVLVLAPTRELAKQVADEFEACAPATLRSVCIYGGAPYRPQEEALRRGVQVVVGTPGRILDHIERGTLKLSGLRFLILDEADSMLDMGFKDDIQKVCDAMGQDSHQRRQVLLFSATLPPWVQKVAQQYMRKDKLVQVDLVQGEDAKASTDVRHVAIPCHWSSMPSTVADCLAVYGGSNKARTIVFCETKKECNELVVNPVIKTECAALHGDIPQAQRETTLKAFREGRVRVLVATDVAARGLDMTVDLVVQNKPPVTASGRTDVETYVHRSGRTGRAGRKGICVTLFSPKYRFAVKEIEGAVGNKFEWAGAPQPADIVAASALAAMEDVANVDDKVFPLFQAAAAKLVEEMGAEEALAAALACLTGHTKELRSRSLLSNSDDYVTCQFQADQPIMSTGYVWTALRNALPQEVTEDIRGMQLTADNTGAVFDVPSKYMKTSMKRAVEENPFLTVCKTLPEIKQPRGVGGGGFSMGGRGSGFGGRAGSGFGGRGRGGGFGGRGRGGGFGGRGRGRGGGGGRGRW
Sbjct:    1 MARILHPLRTHSPPRTEIKACKNSMGKKDKISLAENAMDTTDAVIVTTSKKDKSSRKKKNGVAEEEALTDSSAQSASVVEEDSPNKKRKIKGSQEGADGAGGEKKKKKRAKPEESDAAVKDSAKKTKKCKTQASETADADPNALSNFKISQATCTRLEARGIKSLFPIQSMTLQKILDGCDLIGRARTGCGKTLAFALPVVELIGDEREERGAPPKVLVLAPTRELAKQVADEFEACAPATLRSVCIYGGAPYRPQEEALRRGVQVVVGTPGRILDHIERGTLKLSGLRFLILDEADSMLDMGFKDDIQKVCDAMGQDSHQRRQVLLFSATLPPWVQKVAQQYMRKDKLVQVDLVQGEDAKASTDVRHVAIPCHWSSMPSTVADCLAVYGGSNKARTIVFCETKKECNELVVNPVIKTECAALHGDIPQAQRETTLKAFREGRVRVLVATDVAARGLDMTVDLVVQNKPPVTASGRTDVETYVHRSGRTGRAGRKGICVTLFSPKYRFAVKEIEGAVGNKFEWAGAPQPADIVAASALAAMEDVANVDDKVFPLFQAAAAKLVEEMGAEEALAAALACLTGHTKELRSRSLLSNSDDYVTCQFQADQPIMSTGYVWTALRNALPQEVTEDIRGMQLTADNTGAVFDVPSKYMKTSMKRAVEENPFLTVCKTLPEIKQPRGVGGGGFSMGGRGSGFGGRAGSGFGGRGRGGGFGGRGRGGGFGGRGRGRGGGGGRGRW 737          
BLAST of EWM21167.1 vs. NCBI_GenBank
Match: gi|553188467|ref|XP_005854803.1| (dead deah box rna [Nannochloropsis gaditana CCMP526] >gi|422294259|gb|EKU21559.1| dead deah box rna [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1500.34 bits (3883), Expect = 0.000e+0
Identity = 735/737 (99.73%), Postives = 735/737 (99.73%), Query Frame = 0
Query:    1 MARILHPLRTHSPPRTEIKACKNSMGKKDKISLAENAMDTTDAVIVTTSKKDKSSRKKKNGVAEEEALTDSSAQSASVVEEDSPNKKRKIKGSQEGADGAGGEKKKKKRAKPEESDAAVKDSAKKTKKCKTQASETADADPNALSNFKISQATCTRLEARGIKSLFPIQSMTLQKILDGCDLIGRARTGCGKTLAFALPVVELIGDEREERGAPPKVLVLAPTRELAKQVADEFEACAPATLRSVCIYGGAPYRPQEEALRRGVQVVVGTPGRILDHIERGTLKLSGLRFLILDEADSMLDMGFKDDIQKVCDAMGQDSHQRRQVLLFSATLPPWVQKVAQQYMRKDKLVQVDLVQGEDAKASTDVRHVAIPCHWSSMPSTVADCLAVYGGSNKARTIVFCETKKECNELVVNPVIKTECAALHGDIPQAQRETTLKAFREGRVRVLVATDVAARGLDMTVDLVVQNKPPVTASGRTDVETYVHRSGRTGRAGRKGICVTLFSPKYRFAVKEIEGAVGNKFEWAGAPQPADIVAASALAAMEDVANVDDKVFPLFQAAAAKLVEEMGAEEALAAALACLTGHTKELRSRSLLSNSDDYVTCQFQADQPIMSTGYVWTALRNALPQEVTEDIRGMQLTADNTGAVFDVPSKYMKTSMKRAVEENPFLTVCKTLPEIKQPRGVGGGGFSMGGRGSGFGGRAGSGFGGRGRGGGFGGRGRGGGFGGRGRGRGGGGGRGRW 737
            MARILHPLRTHSPPRTEIKACKNSM KKDKISLAENAMDTTDAVIVTTSKKDKSSRKKKNGVAEEEALTDSSAQSASVVEEDSPNKKRKIKGSQEGADGAGGEKKKKKRAKPEESDAAVKDSAKKTKKCKTQASETADADPNALSNFKISQAT TRLEARGIKSLFPIQSMTLQKILDGCDLIGRARTGCGKTLAFALPVVELIGDEREERGAPPKVLVLAPTRELAKQVADEFEACAPATLRSVCIYGGAPYRPQEEALRRGVQVVVGTPGRILDHIERGTLKLSGLRFLILDEADSMLDMGFKDDIQKVCDAMGQDSHQRRQVLLFSATLPPWVQKVAQQYMRKDKLVQVDLVQGEDAKASTDVRHVAIPCHWSSMPSTVADCLAVYGGSNKARTIVFCETKKECNELVVNPVIKTECAALHGDIPQAQRETTLKAFREGRVRVLVATDVAARGLDMTVDLVVQNKPPVTASGRTDVETYVHRSGRTGRAGRKGICVTLFSPKYRFAVKEIEGAVGNKFEWAGAPQPADIVAASALAAMEDVANVDDKVFPLFQAAAAKLVEEMGAEEALAAALACLTGHTKELRSRSLLSNSDDYVTCQFQADQPIMSTGYVWTALRNALPQEVTEDIRGMQLTADNTGAVFDVPSKYMKTSMKRAVEENPFLTVCKTLPEIKQPRGVGGGGFSMGGRGSGFGGRAGSGFGGRGRGGGFGGRGRGGGFGGRGRGRGGGGGRGRW
Sbjct:    1 MARILHPLRTHSPPRTEIKACKNSMVKKDKISLAENAMDTTDAVIVTTSKKDKSSRKKKNGVAEEEALTDSSAQSASVVEEDSPNKKRKIKGSQEGADGAGGEKKKKKRAKPEESDAAVKDSAKKTKKCKTQASETADADPNALSNFKISQATRTRLEARGIKSLFPIQSMTLQKILDGCDLIGRARTGCGKTLAFALPVVELIGDEREERGAPPKVLVLAPTRELAKQVADEFEACAPATLRSVCIYGGAPYRPQEEALRRGVQVVVGTPGRILDHIERGTLKLSGLRFLILDEADSMLDMGFKDDIQKVCDAMGQDSHQRRQVLLFSATLPPWVQKVAQQYMRKDKLVQVDLVQGEDAKASTDVRHVAIPCHWSSMPSTVADCLAVYGGSNKARTIVFCETKKECNELVVNPVIKTECAALHGDIPQAQRETTLKAFREGRVRVLVATDVAARGLDMTVDLVVQNKPPVTASGRTDVETYVHRSGRTGRAGRKGICVTLFSPKYRFAVKEIEGAVGNKFEWAGAPQPADIVAASALAAMEDVANVDDKVFPLFQAAAAKLVEEMGAEEALAAALACLTGHTKELRSRSLLSNSDDYVTCQFQADQPIMSTGYVWTALRNALPQEVTEDIRGMQLTADNTGAVFDVPSKYMKTSMKRAVEENPFLTVCKTLPEIKQPRGVGGGGFSMGGRGSGFGGRAGSGFGGRGRGGGFGGRGRGGGFGGRGRGRGGGGGRGRW 737          
BLAST of EWM21167.1 vs. NCBI_GenBank
Match: gi|298712936|emb|CBJ26838.1| (DEAD box helicase [Ectocarpus siliculosus])

HSP 1 Score: 603.979 bits (1556), Expect = 0.000e+0
Identity = 306/547 (55.94%), Postives = 395/547 (72.21%), Query Frame = 0
Query:  143 ALSNFKISQATCTRLEARGIKSLFPIQSMTLQKILDGCDLIGRARTGCGKTLAFALPVVE---LIGDEREERGAPPKVLVLAPTRELAKQVADEFEACAPATLRSVCIYGGAPYRPQEEALRRGVQVVVGTPGRILDHIERGTLKLSGLRFLILDEADSMLDMGFKDDIQKVCDAMGQDSHQRRQVLLFSATLPPWVQKVAQQYMRKDKLVQVDLVQGEDAKASTDVRHVAIPCHWSSMPSTVADCLAVYGGSNKARTIVFCETKKECNELVVNPVIKTECAALHGDIPQAQRETTLKAFREGRVRVLVATDVAARGLDMTVDLVVQNKPPVTASGRTDVETYVHRSGRTGRAGRKGICVTLFSPKYRFAVKEIEGAVGNKFEWAGAPQPADIVAASALAAMEDVANVDDKVFPLFQAAAAKLVEEMGAEEALAAALACLTGHTKELRSRSLLSNSDDYVTCQFQADQPIMSTGYVWTALRNALPQEVTEDIRGMQLTADNTGAVFDVPSKYMKTSMKRAVEENPFLTVCKTLPEIKQPR---GVGG 683
            ++  F IS+ T   L  RGI +LFPIQ+ T + I  G DLIGRARTG GKTLAFA+PV+E   + G    + G  P+VLV+APTRELAKQVA +FE  AP +L++ CIYGGAPYRPQE+ALR GV VVVGTPGR+LDH+ RGTL+LS   F+ILDEAD MLDMGFK++++KV +A G++  Q RQ+LLFSAT+PPWV KV ++YM++D+ V +DLV+    KAS DV H+ IPCHW+S  ST+ D ++VYG     RTIVFC TK++CNEL ++P +  +C ALHGDI QA RE+TL  F++G  +VLVATDVAARGLDM VDLV+  +PP   SGR D E+YVHRSGRTGRAGRKG+C+TL++P+ R  + EIE  +GN F W GAPQP DIV ASA AA++D+  VDD V  L++ AA +L++E GA  AL AALAC+TG T+ +  RSLLSNS+ +VT  F++D PI    Y WTA+R  L     ++IRGMQL+ D    VFDVP ++M+  ++   E   +L +C  LP +K  R   GV G
Sbjct:  148 SVDEFDISETTKGHLRNRGITTLFPIQAQTFEHIRRGKDLIGRARTGMGKTLAFAVPVIEKLLMAGAGSLKPGRKPRVLVMAPTRELAKQVAADFELTAP-SLKTTCIYGGAPYRPQEDALRWGVDVVVGTPGRLLDHVGRGTLQLSDAEFIILDEADQMLDMGFKEEMEKVFEACGEEGEQGRQMLLFSATMPPWVDKVVKEYMKEDR-VFIDLVKEGTVKASKDVEHIGIPCHWTSRSSTINDIVSVYGAGGNKRTIVFCTTKRDCNELCMDPKMTYDCQALHGDITQANRESTLAGFKKGSFKVLVATDVAARGLDMIVDLVLNAEPPTHQSGRVDTESYVHRSGRTGRAGRKGMCITLYTPRQRGGLGEIERHIGNDFAWRGAPQPDDIVNASAGAAIDDIRAVDDSVIDLYKTAAEQLIDEKGALNALCAALACMTGRTEAMPVRSLLSNSEGHVTIIFRSDHPIEYMAYCWTAIRKVLSSAAADNIRGMQLSEDGLACVFDVPEEHME-GVRDVCEREDWLDICTELPPLKGAREGKGVNG 691          
BLAST of EWM21167.1 vs. NCBI_GenBank
Match: gi|570966695|gb|ETP29814.1| (hypothetical protein F442_21078 [Phytophthora parasitica P10297])

HSP 1 Score: 600.897 bits (1548), Expect = 0.000e+0
Identity = 304/575 (52.87%), Postives = 410/575 (71.30%), Query Frame = 0
Query:  112 PEESDAAVKDSAKKTKKCKTQASETADADPN-ALSNFKISQATCTRLEARGIKSLFPIQSMTLQKILDGCDLIGRARTGCGKTLAFALPVVELI-GDER-EERGAPPKVLVLAPTRELAKQVADEFEACAPATLRSVCIYGGAPYRPQEEALRRGVQVVVGTPGRILDHIERGTLKLSGLRFLILDEADSMLDMGFKDDIQKVCDAMGQ---DSHQRRQVLLFSATLPPWVQKVAQQYMRKDKLVQVDLVQGEDAKASTDVRHVAIPCHWSSMPSTVADCLAVYGGSNKARTIVFCETKKECNELVVNPVIKTECAALHGDIPQAQRETTLKAFREGRVRVLVATDVAARGLDMTVDLVVQNKPPVTASGRTDVETYVHRSGRTGRAGRKGICVTLFSPKYRFAVKEIEGAVGNKFEWAGAPQPADIVAASALAAMEDVANVDDKVFPLFQAAAAKLVEEMGAEEALAAALACLTGHTKELRSRSLLSNSDDYVTCQFQADQPIMSTGYVWTALRNALPQEVTEDIRGMQLTADNTGAVFDVPSKYMKTSMKRAVEE---NPFLTVCKTLPEIKQ 677
            P E  A  +  A  TKK K++ +     + N +L NF+I   T   L+ARGI +LFPIQ+MT  KILDG DL+GRARTG GKTLAFALPV+EL+  D+R   RG  P+V+ +APTRELAKQVA EFE   P +L +VCIYGGA Y+ Q  A R GV ++VGT GR++DHI+RG L+L    FLILDEAD+ML+MGF++D+QKV  AM Q   +S  +RQ LLFSAT+P WV+ VA +YM+K + V  +LV+  D +ASTDV+H+AIPCHW   P+ +A+ L VY   + +RTI+F ETKK+CNEL V+P IKT+C  LHGDI Q QRETT+KAFREGR+R+L+ATDVAARGLDM VDLV+ ++PP   +G  DV+TYVHRSGRTGRAG+KGIC+TL++ + R  + +IE  +GNKF   G P   D++ ASA  A++++ NVD  +  +FQ  A++L+E M +E+ LAAALAC+TGHTK  R  SL+S   DYVT  F +   I + GYVW A+   +P+++ +DI+ M LT D+ GA FD+P   ++  +++ +EE   N   ++ KTLP+++Q
Sbjct:   74 PAEDTAESEVEAPATKKVKSENATHVGGEENPSLDNFRICDETKKNLQARGIHTLFPIQAMTFDKILDGKDLMGRARTGMGKTLAFALPVIELLLKDKRPRSRGRAPRVVCMAPTRELAKQVASEFELTGP-SLSTVCIYGGASYQSQNNAFRSGVDILVGTTGRVIDHIDRGNLRLHNCEFLILDEADTMLEMGFREDVQKVFTAMDQVKNESTGKRQTLLFSATIPKWVKDVADKYMKKAEYV--NLVKDSDDQASTDVQHIAIPCHWQGRPTLLANLLGVYAKKD-SRTIIFAETKKDCNELAVHPEIKTDCQVLHGDIAQEQRETTMKAFREGRLRLLIATDVAARGLDMNVDLVINSEPPRKMTGMADVDTYVHRSGRTGRAGKKGICITLYTNRQRDQLNQIERKIGNKFIMKGPPDQEDLIKASAEKALKEIDNVDPAMVEIFQEKASELLETMESEKCLAAALACITGHTKPPRRTSLMSGVPDYVTVLFTSSNFIRAKGYVWNAVNRDIPEDIAKDIKQMTLTEDSMGACFDLPIAGLEL-LEKQIEEGGMNCPYSIPKTLPKLQQ 643          
BLAST of EWM21167.1 vs. NCBI_GenBank
Match: gi|970632294|gb|KUF78628.1| (ATP-dependent RNA helicase DDX50 [Phytophthora nicotianae])

HSP 1 Score: 599.742 bits (1545), Expect = 0.000e+0
Identity = 304/575 (52.87%), Postives = 409/575 (71.13%), Query Frame = 0
Query:  112 PEESDAAVKDSAKKTKKCKTQASETADADPN-ALSNFKISQATCTRLEARGIKSLFPIQSMTLQKILDGCDLIGRARTGCGKTLAFALPVVELI-GDER-EERGAPPKVLVLAPTRELAKQVADEFEACAPATLRSVCIYGGAPYRPQEEALRRGVQVVVGTPGRILDHIERGTLKLSGLRFLILDEADSMLDMGFKDDIQKVCDAMGQ---DSHQRRQVLLFSATLPPWVQKVAQQYMRKDKLVQVDLVQGEDAKASTDVRHVAIPCHWSSMPSTVADCLAVYGGSNKARTIVFCETKKECNELVVNPVIKTECAALHGDIPQAQRETTLKAFREGRVRVLVATDVAARGLDMTVDLVVQNKPPVTASGRTDVETYVHRSGRTGRAGRKGICVTLFSPKYRFAVKEIEGAVGNKFEWAGAPQPADIVAASALAAMEDVANVDDKVFPLFQAAAAKLVEEMGAEEALAAALACLTGHTKELRSRSLLSNSDDYVTCQFQADQPIMSTGYVWTALRNALPQEVTEDIRGMQLTADNTGAVFDVPSKYMKTSMKRAVEE---NPFLTVCKTLPEIKQ 677
            P E  A  +  A  TKK K++ +     + N +L NF+I   T   L+ARGI +LFPIQ+MT  KILDG DL+GRARTG GKTLAFALPV+EL+  D+R   RG  P+V+ +APTRELAKQVA EFE   P +L +VCIYGGA Y+ Q  A R GV ++VGT GR++DHI+RG L+L    FLILDEAD+ML+MGF++D+QKV  AM Q   +S  +RQ LLFSAT+P WV+ VA +YM+K + V  +LV+  D +ASTDV+H+AIPCHW   P+ +A+ L VY   + +RTI+F ETKK+CNEL V+P IKT+C  LHGDI Q QRETT+KAFREGR+R+L+ATDVAARGLDM VDLV+ ++PP   +G  DV+TYVHRSGRTGRAG+KGIC+TL++ + R  + +IE  +GNKF   G P   D++ ASA  A++++ NVD  +  +FQ  A++L+E M  E+ LAAALAC+TGHTK  R  SL+S   DYVT  F +   I + GYVW A+   +P+++ +DI+ M LT D+ GA FD+P   ++  +++ +EE   N   ++ KTLP+++Q
Sbjct:   74 PAEDTAESEVEAPATKKVKSENATHVGGEENPSLDNFRICDETKKNLQARGIHTLFPIQAMTFDKILDGKDLMGRARTGMGKTLAFALPVIELLLKDKRPRSRGRAPRVVCMAPTRELAKQVASEFELTGP-SLSTVCIYGGASYQSQNNAFRSGVDILVGTTGRVIDHIDRGNLRLHNCEFLILDEADTMLEMGFREDVQKVFTAMDQVKNESTGKRQTLLFSATIPKWVKDVAXKYMKKAEYV--NLVKDSDDQASTDVQHIAIPCHWQGRPTLLANLLGVYAKKD-SRTIIFAETKKDCNELAVHPEIKTDCQVLHGDIAQEQRETTMKAFREGRLRLLIATDVAARGLDMNVDLVINSEPPRKMTGMADVDTYVHRSGRTGRAGKKGICITLYTNRQRDQLNQIERKIGNKFIMKGPPDQEDLIKASAEKALKEIDNVDPAMVEIFQEKASELLETMEPEKCLAAALACITGHTKPPRRTSLMSGVPDYVTVLFTSSNFIRAKGYVWNAVNRDIPEDIAKDIKQMTLTEDSMGACFDLPIAGLEL-LEKQIEEGGMNCPYSIPKTLPKLQQ 643          
BLAST of EWM21167.1 vs. NCBI_GenBank
Match: gi|566008933|gb|ETI31844.1| (hypothetical protein F443_21248 [Phytophthora parasitica P1569] >gi|567975068|gb|ETL25637.1| hypothetical protein L916_20525 [Phytophthora parasitica] >gi|568004530|gb|ETL78851.1| hypothetical protein L917_20399 [Phytophthora parasitica] >gi|568034461|gb|ETM32130.1| hypothetical protein L914_20404 [Phytophthora parasitica] >gi|570312612|gb|ETO60560.1| hypothetical protein F444_21264 [Phytophthora parasitica P1976] >gi|570936377|gb|ETP01634.1| hypothetical protein F441_21133 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 599.356 bits (1544), Expect = 0.000e+0
Identity = 304/575 (52.87%), Postives = 409/575 (71.13%), Query Frame = 0
Query:  112 PEESDAAVKDSAKKTKKCKTQASETADADPN-ALSNFKISQATCTRLEARGIKSLFPIQSMTLQKILDGCDLIGRARTGCGKTLAFALPVVELI-GDER-EERGAPPKVLVLAPTRELAKQVADEFEACAPATLRSVCIYGGAPYRPQEEALRRGVQVVVGTPGRILDHIERGTLKLSGLRFLILDEADSMLDMGFKDDIQKVCDAMGQ---DSHQRRQVLLFSATLPPWVQKVAQQYMRKDKLVQVDLVQGEDAKASTDVRHVAIPCHWSSMPSTVADCLAVYGGSNKARTIVFCETKKECNELVVNPVIKTECAALHGDIPQAQRETTLKAFREGRVRVLVATDVAARGLDMTVDLVVQNKPPVTASGRTDVETYVHRSGRTGRAGRKGICVTLFSPKYRFAVKEIEGAVGNKFEWAGAPQPADIVAASALAAMEDVANVDDKVFPLFQAAAAKLVEEMGAEEALAAALACLTGHTKELRSRSLLSNSDDYVTCQFQADQPIMSTGYVWTALRNALPQEVTEDIRGMQLTADNTGAVFDVPSKYMKTSMKRAVEE---NPFLTVCKTLPEIKQ 677
            P E  A  +  A  TKK K++ +     + N +L NF+I   T   L+ARGI +LFPIQ+MT  KILDG DL+GRARTG GKTLAFALPV+EL+  D+R   RG  P+V+ +APTRELAKQVA EFE   P +L +VCIYGGA Y+ Q  A R GV ++VGT GR++DHI+RG L+L    FLILDEAD+ML+MGF++D+QKV  AM Q   +S  +RQ LLFSAT+P WV+ VA +YM+K + V  +LV+  D +ASTDV+H+AIPCHW   P+ +A+ L VY   + +RTI+F ETKK+CNEL V+P IKT+C  LHGDI Q QRETT+KAFREGR+R+L+ATDVAARGLDM VDLV+ ++PP   +G  DV+TYVHRSGRTGRAG+KGIC+TL++ + R  + +IE  +GNKF   G P   D++ ASA  A++++ NVD  +  +FQ  A++L+E M  E+ LAAALAC+TGHTK  R  SL+S   DYVT  F +   I + GYVW A+   +P+++ +DI+ M LT D+ GA FD+P   ++  +++ +EE   N   ++ KTLP+++Q
Sbjct:   74 PAEDTAESEVEAPATKKVKSENATHVGGEENPSLDNFRICDETKKNLQARGIHTLFPIQAMTFDKILDGKDLMGRARTGMGKTLAFALPVIELLLKDKRPRSRGRAPRVVCMAPTRELAKQVASEFELTGP-SLSTVCIYGGASYQSQNNAFRSGVDILVGTTGRVIDHIDRGNLRLHNCEFLILDEADTMLEMGFREDVQKVFTAMDQVKNESTGKRQTLLFSATIPKWVKDVADKYMKKAEYV--NLVKDSDDQASTDVQHIAIPCHWQGRPTLLANLLGVYAKKD-SRTIIFAETKKDCNELAVHPEIKTDCQVLHGDIAQEQRETTMKAFREGRLRLLIATDVAARGLDMNVDLVINSEPPRKMTGMADVDTYVHRSGRTGRAGKKGICITLYTNRQRDQLNQIERKIGNKFIMKGPPDQEDLIKASAEKALKEIDNVDPAMVEIFQEKASELLETMEPEKCLAAALACITGHTKPPRRTSLMSGVPDYVTVLFTSSNFIRAKGYVWNAVNRDIPEDIAKDIKQMTLTEDSMGACFDLPIAGLEL-LEKQIEEGGMNCPYSIPKTLPKLQQ 643          
BLAST of EWM21167.1 vs. NCBI_GenBank
Match: gi|675212053|ref|XP_008914911.1| (hypothetical protein PPTG_18629 [Phytophthora parasitica INRA-310] >gi|568084900|gb|ETM99820.1| hypothetical protein PPTG_18629 [Phytophthora parasitica INRA-310])

HSP 1 Score: 598.586 bits (1542), Expect = 0.000e+0
Identity = 303/575 (52.70%), Postives = 408/575 (70.96%), Query Frame = 0
Query:  112 PEESDAAVKDSAKKTKKCKTQASETADADPN-ALSNFKISQATCTRLEARGIKSLFPIQSMTLQKILDGCDLIGRARTGCGKTLAFALPVVELI-GDER-EERGAPPKVLVLAPTRELAKQVADEFEACAPATLRSVCIYGGAPYRPQEEALRRGVQVVVGTPGRILDHIERGTLKLSGLRFLILDEADSMLDMGFKDDIQKVCDAMGQ---DSHQRRQVLLFSATLPPWVQKVAQQYMRKDKLVQVDLVQGEDAKASTDVRHVAIPCHWSSMPSTVADCLAVYGGSNKARTIVFCETKKECNELVVNPVIKTECAALHGDIPQAQRETTLKAFREGRVRVLVATDVAARGLDMTVDLVVQNKPPVTASGRTDVETYVHRSGRTGRAGRKGICVTLFSPKYRFAVKEIEGAVGNKFEWAGAPQPADIVAASALAAMEDVANVDDKVFPLFQAAAAKLVEEMGAEEALAAALACLTGHTKELRSRSLLSNSDDYVTCQFQADQPIMSTGYVWTALRNALPQEVTEDIRGMQLTADNTGAVFDVPSKYMKTSMKRAVEE---NPFLTVCKTLPEIKQ 677
            P E  A  +  A  TKK K++ +     + N +L NF+I   T   L+ARGI +LFPIQ+MT  KILDG DL+GRARTG GKTLAF LPV+EL+  D+R   RG  P+V+ +APTRELAKQVA EFE   P +L +VCIYGGA Y+ Q  A R GV ++VGT GR++DHI+RG L+L    FLILDEAD+ML+MGF++D+QKV  AM Q   +S  +RQ LLFSAT+P WV+ VA +YM+K + V  +LV+  D +ASTDV+H+AIPCHW   P+ +A+ L VY   + +RTI+F ETKK+CNEL V+P IKT+C  LHGDI Q QRETT+KAFREGR+R+L+ATDVAARGLDM VDLV+ ++PP   +G  DV+TYVHRSGRTGRAG+KGIC+TL++ + R  + +IE  +GNKF   G P   D++ ASA  A++++ NVD  +  +FQ  A++L+E M  E+ LAAALAC+TGHTK  R  SL+S   DYVT  F +   I + GYVW A+   +P+++ +DI+ M LT D+ GA FD+P   ++  +++ +EE   N   ++ KTLP+++Q
Sbjct:   74 PAEDTAESEVEAPATKKVKSENATHVGGEENPSLDNFRICDETKKNLQARGIHTLFPIQAMTFDKILDGKDLMGRARTGMGKTLAFVLPVIELLLKDKRPRSRGRAPRVVCMAPTRELAKQVASEFELTGP-SLSTVCIYGGASYQSQNNAFRSGVDILVGTTGRVIDHIDRGNLRLHNCEFLILDEADTMLEMGFREDVQKVFTAMDQVKNESTGKRQTLLFSATIPKWVKDVADKYMKKAEYV--NLVKDSDDQASTDVQHIAIPCHWQGRPTLLANLLGVYAKKD-SRTIIFAETKKDCNELAVHPEIKTDCQVLHGDIAQEQRETTMKAFREGRLRLLIATDVAARGLDMNVDLVINSEPPRKMTGMADVDTYVHRSGRTGRAGKKGICITLYTNRQRDQLNQIERKIGNKFIMKGPPDQEDLIKASAEKALKEIDNVDPAMVEIFQEKASELLETMEPEKCLAAALACITGHTKPPRRTSLMSGVPDYVTVLFTSSNFIRAKGYVWNAVNRDIPEDIAKDIKQMTLTEDSMGACFDLPIAGLEL-LEKQIEEGGMNCPYSIPKTLPKLQQ 643          
BLAST of EWM21167.1 vs. NCBI_GenBank
Match: gi|970656729|gb|KUF94706.1| (Elicitin protein RAL13D [Phytophthora nicotianae])

HSP 1 Score: 596.275 bits (1536), Expect = 0.000e+0
Identity = 296/543 (54.51%), Postives = 390/543 (71.82%), Query Frame = 0
Query:  112 PEESDAAVKDSAKKTKKCKTQASETADADPN-ALSNFKISQATCTRLEARGIKSLFPIQSMTLQKILDGCDLIGRARTGCGKTLAFALPVVELI-GDER-EERGAPPKVLVLAPTRELAKQVADEFEACAPATLRSVCIYGGAPYRPQEEALRRGVQVVVGTPGRILDHIERGTLKLSGLRFLILDEADSMLDMGFKDDIQKVCDAMGQ---DSHQRRQVLLFSATLPPWVQKVAQQYMRKDKLVQVDLVQGEDAKASTDVRHVAIPCHWSSMPSTVADCLAVYGGSNKARTIVFCETKKECNELVVNPVIKTECAALHGDIPQAQRETTLKAFREGRVRVLVATDVAARGLDMTVDLVVQNKPPVTASGRTDVETYVHRSGRTGRAGRKGICVTLFSPKYRFAVKEIEGAVGNKFEWAGAPQPADIVAASALAAMEDVANVDDKVFPLFQAAAAKLVEEMGAEEALAAALACLTGHTKELRSRSLLSNSDDYVTCQFQADQPIMSTGYVWTALRNALPQEVTEDIRGMQLTADNTGAVFDVP 648
            P E  A  +  A  TKK K++ +     + N +L NF+I   T   L+ARGI +LFPIQ+MT  KILDG DL+GRARTG GKTLAFALPV+EL+  D+R   RG  P+V+ +APTRELAKQVA EFE   P +L +VCIYGGA Y+ Q  A R GV ++VGT GR++DHI+RG L+L    FLILDEAD+ML+MGF++D+QKV  AM Q   +S  +RQ LLFSAT+P WV+ VA +YM+K + V  +LV+  D +ASTDV+H+AIPCHW   P+ +A+ L VY   + +RTI+F ETKK+CNEL V+P IKT+C  LHGDI Q QRETT+KAFREGR+R+L+ATDVAARGLDM VDLV+ ++PP   +G  DV+TYVHRSGRTGRAG+KGIC+TL++ + R  + +IE  +GNKF   G P   D++ ASA  A++++ NVD  +  +FQ  A++L+E M  E+ LAAALAC+TGHTK  R  SL+S   DYVT  F +   I + GYVW A+   +P+++ +DI+ M LT D+ GA FD+P
Sbjct:   74 PAEDTAESEVEAPATKKVKSENATHVGGEENPSLDNFRICDETKKNLQARGIHTLFPIQAMTFDKILDGKDLMGRARTGMGKTLAFALPVIELLLKDKRPRSRGRAPRVVCMAPTRELAKQVASEFELTGP-SLSTVCIYGGASYQSQNNAFRSGVDILVGTTGRVIDHIDRGNLRLHNCEFLILDEADTMLEMGFREDVQKVFTAMDQVKNESTGKRQTLLFSATIPKWVKDVAHKYMKKAEYV--NLVKDSDDQASTDVQHIAIPCHWQGRPTLLANLLGVYAKKD-SRTIIFAETKKDCNELAVHPEIKTDCQVLHGDIAQEQRETTMKAFREGRLRLLIATDVAARGLDMNVDLVINSEPPRKMTGMADVDTYVHRSGRTGRAGKKGICITLYTNRQRDQLNQIERKIGNKFIMKGPPDQEDLIKASAEKALKEIDNVDPAMVEIFQEKASELLETMEPEKCLAAALACITGHTKPPRRTSLMSGVPDYVTVLFTSSNFIRAKGYVWNAVNRDIPEDIAKDIKQMTLTEDSMGACFDLP 612          
BLAST of EWM21167.1 vs. NCBI_GenBank
Match: gi|695394112|ref|XP_009520796.1| (hypothetical protein PHYSODRAFT_326516 [Phytophthora sojae] >gi|348685693|gb|EGZ25508.1| hypothetical protein PHYSODRAFT_326516 [Phytophthora sojae])

HSP 1 Score: 580.096 bits (1494), Expect = 0.000e+0
Identity = 298/575 (51.83%), Postives = 399/575 (69.39%), Query Frame = 0
Query:  112 PEESDAAVKDSAKKTKKCKTQASETADADPNALSNFKISQATCTRLEARGIKSLFPIQSMTLQKILDGCDLIGRARTGCGKTLAFALPVVELI-GDER-EERGAPPKVLVLAPTRELAKQVADEFEACAPATLRSVCIYGGAPYRPQEEALRRGVQVVVGTPGRILDHIERGTLKLSGLRFLILDEADSMLDMGFKDDIQKVCDAMGQ---DSHQRRQVLLFSATLPPWVQKVAQQYMRKDKLVQVDLVQGEDAKASTDVRHVAIPCHWSSMPSTVADCLAVYGGSNKARTIVFCETKKECNELVVNPVIKTECAALHGDIPQAQRETTLKAFREGRVRVLVATDVAARGLDMTVDLVVQNKPPVTASGRTDVETYVHRSGRTGRAGRKGICVTLFSPKYRFAVKEIEGAVGNKFEWAGAPQPADIVAASALAAMEDVANVDDKVFPLFQAAAAKLVEEMGAEEALAAALACLTGHTKELRSRSLLSNSDDYVTCQFQADQPIMSTGYVWTALRNALPQEVTEDIRGMQLTADNTGAVFDVPSKYMKTSMKRAVEEN----PFLTVCKTLPEIKQ 677
            PE S+ +  ++    K     A+     +   L +F I   T   L+ARGI +LFPIQ+MT  KIL G DL+GRARTG GKTLAFALPV+EL+  D+R   RG  P+V+ +APTRELAKQVA EFE   P +L +VCIYGGA Y+ Q  A R GV ++VGT GR++DHI+RG L+L    FLILDEAD+ML+MGF++D+QKV  AM Q   +S  +RQ LLFSAT+P WV  VA +YM KD+   V+LV+  D +ASTDV+H+AIPCHW   P+ +A+ L VY   + +RTI+F ETKK+CNEL V+P IKT+C  LHGDI Q QRETT+KAFREGR+R+L+ATDVAARGLDM VDLV+ ++PP   SG  DV+TYVHRSGRTGRAG+KGIC+TL++ + R  + +IE  +GNKF   G P   D++ ASA  A+ ++ NVD  +  +FQ  AA+L+ +M  E+ LAAALAC+TGHTK  R  SL+S   DYVT  F +   I + GYVW A+   +P+    DI+ + LT D+ GA FD+P   ++  +++ +EE     P+ ++ KT+P+++Q
Sbjct:   70 PEISEESEVETPAAKKAKNENATHVGGTENPPLESFDICAETVKNLKARGIHTLFPIQAMTFDKILAGKDLMGRARTGMGKTLAFALPVIELLLKDKRPRSRGRAPRVVCMAPTRELAKQVATEFEQSGP-SLSTVCIYGGASYQSQNNAFRSGVDILVGTTGRVIDHIDRGNLRLHNCEFLILDEADTMLEMGFREDVQKVFAAMEQTKNESSGKRQTLLFSATIPKWVTDVADKYMAKDR-EYVNLVKDSDDQASTDVQHIAIPCHWQGRPTLLANLLGVYAKKD-SRTIIFAETKKDCNELAVHPEIKTDCQVLHGDIAQEQRETTMKAFREGRLRLLIATDVAARGLDMNVDLVINSEPPRKMSGMADVDTYVHRSGRTGRAGKKGICITLYTNRQRDQLTQIERKIGNKFIMKGPPDQEDLIKASAAKALTEINNVDPSMIEIFQEKAAELLGQMDPEKCLAAALACITGHTKPPRRTSLMSGVPDYVTVLFTSSNFIRAKGYVWNAVNRDIPENFANDIKQLTLTEDSMGACFDLPIGALEI-VEKLIEEGGMHCPY-SIPKTIPKLQQ 639          
BLAST of EWM21167.1 vs. NCBI_GenBank
Match: gi|301111464|ref|XP_002904811.1| (DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4] >gi|262095141|gb|EEY53193.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 578.941 bits (1491), Expect = 0.000e+0
Identity = 311/608 (51.15%), Postives = 415/608 (68.26%), Query Frame = 0
Query:  112 PEESDAAVKDSAKKTKKCKTQASETADADPN-ALSNFKISQATCTRLEARGIKSLFPIQSMTLQKILDGCDLIGRARTGCGKTLAFALPVVELIGDEREERGAPPK--VLVLAPTRELAKQVADEFEACAPATLRSVCIYGGAPYRPQEEALRRGVQVVVGTPGRILDHIERGTLKLSGLRFLILDEADSMLDMGFKDDIQKVCDAMGQ---DSHQRRQVLLFSATLPPWVQKVAQQYMRKDKLVQVDLVQGEDAKASTDVRHVAIPCHWSSMPSTVADCLAVYGGSNKARTIVFCETKKECNELVVNPVIKTECAALHGDIPQAQRETTLKAFREGRVRVLVATDVAARGLDMTVDLVVQNKPPVTASGRTDVETYVHRSGRTGRAGRKGICVTLFSPKYRFAVKEIEGAVGNKFEWAGAPQPADIVAASALAAMEDVANVDDKVFPLFQAAAAKLVEEMGAEEALAAALACLTGHTKELRSRSLLSNSDDYVTCQFQADQPIMSTGYVWTALRNALPQEVTEDIRGMQLTADNTGAVFDVPS---KYMKTSMKRAVEENPFLTVCKTLPEIKQPRGVGGGGFSMGGRGSGFGGRAGSGFGGRGRGG 710
            P E     +  A   KK K + +     + N +L NF+I   T   L+ARGI +LFPIQ+MT  KI+DG DL+GRARTG GKTLAFALPV+EL+  ++  R       V+ +APTRELAKQVA EFE   P +L +VCIYGGA Y+ Q  A R GV ++VGT GR++DHI+RG L+L    FLILDEAD+ML+MGF++D+QKV  AM Q   +S  +RQ LLFSAT+P WV+ VA +YM+K + V  +LV+  D +ASTDV+H+AIPCHW   P+ +A+ L VY   + +RTI+F ETKK+CNEL V+P IKT+C  LHGDI Q QRETT+KAFREGR+R+L+ATDVAARGLDM VDLV+ ++PP   SG  DV+TYVHRSGRTGRAG+KGIC+TL++ + R  + +IE  +GNKF   G P   D++ ASA  A++++ NVD  +  +FQ  A +L+E M  E+ LAAALAC+TGHTK  R  SL+S   DYVT  F +   I + GYVW A+   +P+E+++DI+ M LT D  GA FD+P    + ++T M+ +    P+ ++ KTLP+++Q        + M  R   +GGR G    GRGRGG
Sbjct:   75 PAEETGESEVEAPAAKKAKNENATHVGGEENPSLDNFRICDETKKNLQARGIHTLFPIQAMTFDKIVDGKDLMGRARTGMGKTLAFALPVIELLLQDKRPRARGRAPRVVCMAPTRELAKQVATEFELTGP-SLSTVCIYGGASYQSQNNAFRSGVDILVGTTGRVIDHIDRGNLRLHNCEFLILDEADTMLEMGFREDVQKVFTAMDQVKNESTGKRQTLLFSATIPKWVKDVADKYMKKAEYV--NLVKDSDDQASTDVQHIAIPCHWQGRPTLLANLLGVYAKKD-SRTIIFAETKKDCNELAVHPEIKTDCQVLHGDIAQEQRETTMKAFREGRLRLLIATDVAARGLDMNVDLVINSEPPRKMSGMADVDTYVHRSGRTGRAGKKGICITLYTNRQRDQLNQIERKIGNKFIMKGPPDQEDLIKASAAKALKEIDNVDPSMIEIFQEKARELLETMEPEKCLAAALACITGHTKPPRRTSLMSGVPDYVTVLFTSSNFIRAKGYVWNAVNRDIPEEISKDIKQMTLTEDAMGACFDLPIAGLELLETQMEESGMNCPY-SIPKTLPKLQQ------SAYQM--RPQSYGGRGGGRGAGRGRGG 669          
The following BLAST results are available for this feature:
BLAST of EWM21167.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101237|gb|EWM21167.1|0.000e+0100.00dead deah box rna [Nannochloropsis gaditana][more]
gi|553188467|ref|XP_005854803.1|0.000e+099.73dead deah box rna [Nannochloropsis gaditana CCMP52... [more]
gi|298712936|emb|CBJ26838.1|0.000e+055.94DEAD box helicase [Ectocarpus siliculosus][more]
gi|570966695|gb|ETP29814.1|0.000e+052.87hypothetical protein F442_21078 [Phytophthora para... [more]
gi|970632294|gb|KUF78628.1|0.000e+052.87ATP-dependent RNA helicase DDX50 [Phytophthora nic... [more]
gi|566008933|gb|ETI31844.1|0.000e+052.87hypothetical protein F443_21248 [Phytophthora para... [more]
gi|675212053|ref|XP_008914911.1|0.000e+052.70hypothetical protein PPTG_18629 [Phytophthora para... [more]
gi|970656729|gb|KUF94706.1|0.000e+054.51Elicitin protein RAL13D [Phytophthora nicotianae][more]
gi|695394112|ref|XP_009520796.1|0.000e+051.83hypothetical protein PHYSODRAFT_326516 [Phytophtho... [more]
gi|301111464|ref|XP_002904811.1|0.000e+051.15DEAD/DEAH box RNA helicase, putative [Phytophthora... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9546rna9546Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications