EWM21159.1, cds9512 (CDS) Nannochloropsis gaditana

Overview
NameEWM21159.1
Unique Namecds9512
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037254.1:135452..135562 -
Alignment locationKK037254.1:133646..135247 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21159.1
Productankyrin repeat protein
Orig transcript idgnl|cribi|Naga_100108g11.7744.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:135452..135562 -
KK037254.1supercontigKK037254.1:133646..135247 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR020683Ankyrin_rpt-contain_dom
IPR002110Ankyrin_rpt
Homology
BLAST of EWM21159.1 vs. NCBI_GenBank
Match: gi|585101229|gb|EWM21159.1| (ankyrin repeat protein [Nannochloropsis gaditana])

HSP 1 Score: 1165.21 bits (3013), Expect = 0.000e+0
Identity = 570/570 (100.00%), Postives = 570/570 (100.00%), Query Frame = 0
Query:    1 MDDVRRVSHRIHDAAKKGRIDDVAKLLADYPQLVNDKGEDGWTPLFRACYNNHLELAKYLAENGANLGRDADDFQNTALHACCINGHRQVAEFLLTKGVDVNDHDNVGGWTPLYAASFFAWPELVRLLLEKGADPSIACKEGKTALHVVCEAGYRGEHRPTIMALLQNLPEPTEARPRDGRGRGHRGEGEREGGRTSHRHHQHYHQSLEAQARGHLALKSSSSEGGKMEIGVAGPPPYTEDGSGKRTYFPWELGSADYAWRAAGLCRGMLTRVLAEVVETGRLAALPVEATVRKGKEFEKPFVDVFDLLEAAMQVAETLETFVHEKKGEVGGRRPATTKGNDKEKAGGEVERAAANGEDDADLSLSRCSLDCNQDEGATMPLGERLKLLGIAFSIQLNPAHHPQRGETGALLACLYTVATRLSQEDVAERVHSLLAQYHSHSESKSLRLRLLRVSQIRGPLEGHERVSRRAACPGEDTDPLISTGKDAQRSERRRSASCSSSESKDSAGAGMVGGLSGGFSPVGRGGDGGEKGERMLARAEERERSKREYLEQFKFLKEHAQDLILSDDL 570
            MDDVRRVSHRIHDAAKKGRIDDVAKLLADYPQLVNDKGEDGWTPLFRACYNNHLELAKYLAENGANLGRDADDFQNTALHACCINGHRQVAEFLLTKGVDVNDHDNVGGWTPLYAASFFAWPELVRLLLEKGADPSIACKEGKTALHVVCEAGYRGEHRPTIMALLQNLPEPTEARPRDGRGRGHRGEGEREGGRTSHRHHQHYHQSLEAQARGHLALKSSSSEGGKMEIGVAGPPPYTEDGSGKRTYFPWELGSADYAWRAAGLCRGMLTRVLAEVVETGRLAALPVEATVRKGKEFEKPFVDVFDLLEAAMQVAETLETFVHEKKGEVGGRRPATTKGNDKEKAGGEVERAAANGEDDADLSLSRCSLDCNQDEGATMPLGERLKLLGIAFSIQLNPAHHPQRGETGALLACLYTVATRLSQEDVAERVHSLLAQYHSHSESKSLRLRLLRVSQIRGPLEGHERVSRRAACPGEDTDPLISTGKDAQRSERRRSASCSSSESKDSAGAGMVGGLSGGFSPVGRGGDGGEKGERMLARAEERERSKREYLEQFKFLKEHAQDLILSDDL
Sbjct:    1 MDDVRRVSHRIHDAAKKGRIDDVAKLLADYPQLVNDKGEDGWTPLFRACYNNHLELAKYLAENGANLGRDADDFQNTALHACCINGHRQVAEFLLTKGVDVNDHDNVGGWTPLYAASFFAWPELVRLLLEKGADPSIACKEGKTALHVVCEAGYRGEHRPTIMALLQNLPEPTEARPRDGRGRGHRGEGEREGGRTSHRHHQHYHQSLEAQARGHLALKSSSSEGGKMEIGVAGPPPYTEDGSGKRTYFPWELGSADYAWRAAGLCRGMLTRVLAEVVETGRLAALPVEATVRKGKEFEKPFVDVFDLLEAAMQVAETLETFVHEKKGEVGGRRPATTKGNDKEKAGGEVERAAANGEDDADLSLSRCSLDCNQDEGATMPLGERLKLLGIAFSIQLNPAHHPQRGETGALLACLYTVATRLSQEDVAERVHSLLAQYHSHSESKSLRLRLLRVSQIRGPLEGHERVSRRAACPGEDTDPLISTGKDAQRSERRRSASCSSSESKDSAGAGMVGGLSGGFSPVGRGGDGGEKGERMLARAEERERSKREYLEQFKFLKEHAQDLILSDDL 570          
BLAST of EWM21159.1 vs. NCBI_GenBank
Match: gi|553188463|ref|XP_005854802.1| (ankyrin repeat protein [Nannochloropsis gaditana CCMP526] >gi|422294258|gb|EKU21558.1| ankyrin repeat protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 241.506 bits (615), Expect = 1.756e-74
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0
Query:    1 MDDVRRVSHRIHDAAKKGRIDDVAKLLADYPQLVNDKGEDGWTPLFRACYNNHLELAKYLAENGANLGRDADDFQNTALHACCINGHRQVAEFLLTKGVDVNDHDNVGGWTPL 113
            MDDVRRVSHRIHDAAKKGRIDDVAKLLADYPQLVNDKGEDGWTPLFRACYNNHLELAKYLAENGANLGRDADDFQNTALHACCINGHRQVAEFLLTKGVDVNDHDNVGGWTPL
Sbjct:    1 MDDVRRVSHRIHDAAKKGRIDDVAKLLADYPQLVNDKGEDGWTPLFRACYNNHLELAKYLAENGANLGRDADDFQNTALHACCINGHRQVAEFLLTKGVDVNDHDNVGGWTPL 113          
BLAST of EWM21159.1 vs. NCBI_GenBank
Match: gi|515131163|ref|WP_016760007.1| (hypothetical protein [Leptospira weilii])

HSP 1 Score: 106.301 bits (264), Expect = 1.367e-22
Identity = 60/148 (40.54%), Postives = 82/148 (55.41%), Query Frame = 0
Query:   10 RIHDAAKKGRIDDVAKLLADYPQLVNDKGEDGWTPLFRACYNNHLELAKYLAENGANLGRDAD---DFQNTALHACCINGHRQVAEFLLTKGVDVNDHDNVGGWTPLY-AASFFAWPELVRLLLEKGADPSIACKEGKTALHVVCEAG 153
             + +AA  G +++  +L+     ++N    DGW+ L  A Y  HLE+ K+L  +GANLG  +     + NTALH+    G + V E LL KG D N   N GG TPL+ AAS F    +++LLLEKGAD  I   EGKT   +  E G
Sbjct:   61 NLFEAAALGDLEETKRLVFGSSDMINSFSHDGWSALHLASYFGHLEIVKFLISSGANLGLTSKSKLSYGNTALHSAVATGKKAVVELLLEKGADANALQNPGGITPLHIAASRFGSDGIIQLLLEKGADKKIWNSEGKTPYTIALEKG 208          
BLAST of EWM21159.1 vs. NCBI_GenBank
Match: gi|490631708|ref|WP_004496708.1| (hypothetical protein [Leptospira weilii] >gi|410778534|gb|EKR63160.1| ankyrin repeat protein [Leptospira weilii str. 2006001853] >gi|464135047|gb|EMM72423.1| ankyrin repeat protein [Leptospira weilii str. 2006001855] >gi|464235285|gb|EMN43553.1| ankyrin repeat protein [Leptospira weilii str. LNT 1234])

HSP 1 Score: 106.301 bits (264), Expect = 1.598e-22
Identity = 60/148 (40.54%), Postives = 82/148 (55.41%), Query Frame = 0
Query:   10 RIHDAAKKGRIDDVAKLLADYPQLVNDKGEDGWTPLFRACYNNHLELAKYLAENGANLGRDAD---DFQNTALHACCINGHRQVAEFLLTKGVDVNDHDNVGGWTPLY-AASFFAWPELVRLLLEKGADPSIACKEGKTALHVVCEAG 153
             + +AA  G +++  +L+     ++N    DGW+ L  A Y  HLE+ K+L  +GANLG  +     + NTALH+    G + V E LL KG D N   N GG TPL+ AAS F    +++LLLEKGAD  I   EGKT   +  E G
Sbjct:   61 NLFEAAALGDLEETKRLVFGSSDMINSFSHDGWSALHLASYFGHLEIVKFLISSGANLGLTSKSKLSYGNTALHSAVATGKKAVVELLLEKGADANALQNPGGITPLHIAASRFGSDGIIQLLLEKGADKKIWNSEGKTPYTIALEKG 208          
BLAST of EWM21159.1 vs. NCBI_GenBank
Match: gi|647311633|ref|WP_025749997.1| (ankyrin repeat domain-containing protein [Bacillus flexus])

HSP 1 Score: 101.679 bits (252), Expect = 1.563e-21
Identity = 60/143 (41.96%), Postives = 79/143 (55.24%), Query Frame = 0
Query:   10 RIHDAAKKGRIDDVAKLLADYPQLVNDKGEDGWTPLFRACYNNHLELAKYLAENGANLGRDADDF-QNTALHACCINGHRQVAEFLLTKGVDVNDHDNVGGWTPLYAASFFAWPELVRLLLEKGADPSIACKEGKTALHVVCE 151
            +I +AA  G  +++  LL   P L+N    DGWTPL  ACY   +E AK L   GA++   A +  +N  LHA   N   Q  + LLTKG DVN   + GGWT L+ AS      +++LL+EKGAD  I   +GKT L V  E
Sbjct:    6 QITNAAVNGESEEIKALLNKEPSLLNAFNSDGWTPLHLACYFGQVESAKLLLSLGADIHIKAKNSNENMPLHAAVANKQIQAVDLLLTKGADVNAKQS-GGWTSLHEASLLGDENMIKLLIEKGADIEIQKDDGKTPLEVAVE 147          
BLAST of EWM21159.1 vs. NCBI_GenBank
Match: gi|1089146635|emb|SDY87024.1| (Ankyrin repeat-containing protein [Bacillus sp. 166amftsu])

HSP 1 Score: 101.293 bits (251), Expect = 1.971e-21
Identity = 58/146 (39.73%), Postives = 84/146 (57.53%), Query Frame = 0
Query:   11 IHDAAKKGRIDDVAKLLADYPQLVNDKGEDGWTPLFRACYNNHLELAKYLAENGANLGRDA-DDFQNTALHACCINGHRQVAEFLLTKGVDVNDHDNVGGWTPLYAASFFAWPELVRLLLEKGADPSIACKEGKTALHVVCEAGYR 155
            I +A   G ++ V +L+ +   LV+   EDGWTPL  A Y  H E+A +L + G NL   A +  +NT+L A   N   ++A FL+ +G DVN   + GGWT L+ A+     ++V LL+E GAD SI   +GKTA  +  E GY+
Sbjct:   16 ITNAVMNGELEKVVELINEDQNLVHVYSEDGWTPLHLAAYFGHKEIASFLLKKGTNLHVKAKNQNENTSLQAAIANKKIEMATFLIEQGADVNAVQS-GGWTGLHEAALLGDEKIVALLIENGADKSIKKNDGKTAYDIALEKGYQ 160          
BLAST of EWM21159.1 vs. NCBI_GenBank
Match: gi|498264892|ref|WP_010579048.1| (hypothetical protein [Leptospira alexanderi] >gi|529327579|gb|EQA64204.1| ankyrin repeat protein [Leptospira alexanderi serovar Manhao 3 str. L 60])

HSP 1 Score: 103.219 bits (256), Expect = 2.078e-21
Identity = 58/148 (39.19%), Postives = 82/148 (55.41%), Query Frame = 0
Query:   10 RIHDAAKKGRIDDVAKLLADYPQLVNDKGEDGWTPLFRACYNNHLELAKYLAENGANLGRDAD---DFQNTALHACCINGHRQVAEFLLTKGVDVNDHDNVGGWTPLY-AASFFAWPELVRLLLEKGADPSIACKEGKTALHVVCEAG 153
             + +AA  G +++  +L++    ++N    DGW+ L  A Y  HLE+ K+L  +GANLG  +     + NTALH+    G + V E LL KG D N   N GG TPL+ AAS      +++LLL+KGAD  I   EGKT   +  E G
Sbjct:   61 NLFEAAALGDLEETKRLVSGSSDMINSFSHDGWSALHLASYFGHLEIVKFLISSGANLGLTSKSKLSYGNTALHSAVATGKKAVVELLLEKGADANALQNPGGITPLHIAASRSGSDGIIQLLLKKGADKKIWSSEGKTPYTIALEKG 208          
BLAST of EWM21159.1 vs. NCBI_GenBank
Match: gi|488837368|ref|WP_002749774.1| (ankyrin repeat protein [Leptospira borgpetersenii] >gi|464396899|gb|EMO65256.1| ankyrin repeat protein [Leptospira borgpetersenii serovar Pomona str. 200901868])

HSP 1 Score: 102.834 bits (255), Expect = 2.700e-21
Identity = 57/146 (39.04%), Postives = 83/146 (56.85%), Query Frame = 0
Query:   10 RIHDAAKKGRIDDVAKLLADYPQLVNDKGEDGWTPLFRACYNNHLELAKYLAENGANLGRDAD---DFQNTALHACCINGHRQVAEFLLTKGVDVNDHDNVGGWTPLYAASFFAWPE-LVRLLLEKGADPSIACKEGKTALHVVCE 151
             + +AA  G +++  +LL+    ++N    DGW+ L  A Y  HLE+ K+L  +GANLG  +     + NTALH+    G + V EFLL KG D N   N GG TPL+ A+  +  + +++LLL+KGAD  I   EGKT   +  E
Sbjct:   61 NLFEAAALGDLEETKRLLSGSSDMINSFSHDGWSALHLASYFGHLEIVKFLISSGANLGLTSKSKLSYGNTALHSAVATGKKAVVEFLLDKGADPNALQNPGGITPLHIAAGRSGSDGIIQLLLKKGADKKIWSSEGKTPYTIALE 206          
BLAST of EWM21159.1 vs. NCBI_GenBank
Match: gi|651596070|ref|WP_026591035.1| (hypothetical protein [Bacillus sp. UNC437CL72CviS29])

HSP 1 Score: 100.908 bits (250), Expect = 2.806e-21
Identity = 58/146 (39.73%), Postives = 84/146 (57.53%), Query Frame = 0
Query:   11 IHDAAKKGRIDDVAKLLADYPQLVNDKGEDGWTPLFRACYNNHLELAKYLAENGANLGRDA-DDFQNTALHACCINGHRQVAEFLLTKGVDVNDHDNVGGWTPLYAASFFAWPELVRLLLEKGADPSIACKEGKTALHVVCEAGYR 155
            I +A   G ++ V +L+ +   LV+   EDGWTPL  A Y  H E+A +L + G NL   A +  +NT+L A   N   ++A FL+ +G DVN   + GGWT L+ A+     ++V LL+E GAD SI   +GKTA  +  E GY+
Sbjct:    7 ITNAVMNGELEKVVELINEDQNLVHVYSEDGWTPLHLAAYFGHKEIASFLLKKGTNLHVKAKNQNENTSLQAAIANKKIEMATFLIEQGADVNAVQS-GGWTGLHEAALLGDEKIVALLIENGADKSIKKNDGKTAYDIALEKGYQ 151          
BLAST of EWM21159.1 vs. NCBI_GenBank
Match: gi|488706968|ref|WP_002630913.1| (ankyrin repeat protein [Leptospira weilii] >gi|464296522|gb|EMN91016.1| ankyrin repeat protein [Leptospira weilii str. UI 13098] >gi|476388567|gb|EMY12730.1| ankyrin repeat protein [Leptospira weilii str. Ecochallenge])

HSP 1 Score: 102.449 bits (254), Expect = 3.122e-21
Identity = 59/148 (39.86%), Postives = 81/148 (54.73%), Query Frame = 0
Query:   10 RIHDAAKKGRIDDVAKLLADYPQLVNDKGEDGWTPLFRACYNNHLELAKYLAENGANLGRDAD---DFQNTALHACCINGHRQVAEFLLTKGVDVNDHDNVGGWTPLY-AASFFAWPELVRLLLEKGADPSIACKEGKTALHVVCEAG 153
             + +AA  G +++  +L+     ++N    DGW+ L  A Y  HLE+ K+L  +GANLG  +     + NTALH+    G + V E LL KG D N   N GG TPL+ AAS      +++LLLEKGAD  I   EGKT   +  E G
Sbjct:   61 NLFEAAALGDLEETKRLVFGSSDMINSFSHDGWSALHLASYFGHLEIVKFLISSGANLGLTSKSKLSYGNTALHSAVATGKKAVVELLLEKGADANALQNPGGITPLHIAASRSGSDGIIQLLLEKGADKKIWNSEGKTPYTIALEKG 208          
The following BLAST results are available for this feature:
BLAST of EWM21159.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101229|gb|EWM21159.1|0.000e+0100.00ankyrin repeat protein [Nannochloropsis gaditana][more]
gi|553188463|ref|XP_005854802.1|1.756e-74100.00ankyrin repeat protein [Nannochloropsis gaditana C... [more]
gi|515131163|ref|WP_016760007.1|1.367e-2240.54hypothetical protein [Leptospira weilii][more]
gi|490631708|ref|WP_004496708.1|1.598e-2240.54hypothetical protein [Leptospira weilii] >gi|41077... [more]
gi|647311633|ref|WP_025749997.1|1.563e-2141.96ankyrin repeat domain-containing protein [Bacillus... [more]
gi|1089146635|emb|SDY87024.1|1.971e-2139.73Ankyrin repeat-containing protein [Bacillus sp. 16... [more]
gi|498264892|ref|WP_010579048.1|2.078e-2139.19hypothetical protein [Leptospira alexanderi] >gi|5... [more]
gi|488837368|ref|WP_002749774.1|2.700e-2139.04ankyrin repeat protein [Leptospira borgpetersenii]... [more]
gi|651596070|ref|WP_026591035.1|2.806e-2139.73hypothetical protein [Bacillus sp. UNC437CL72CviS2... [more]
gi|488706968|ref|WP_002630913.1|3.122e-2139.86ankyrin repeat protein [Leptospira weilii] >gi|464... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9543rna9543Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications