EWM21181.1, cds9500 (CDS) Nannochloropsis gaditana

Overview
NameEWM21181.1
Unique Namecds9500
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037254.1:98304..98570 -
Alignment locationKK037254.1:97316..98108 -
Alignment locationKK037254.1:96535..97159 -
Alignment locationKK037254.1:95979..96405 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21181.1
ProductCholine transporter
Orig transcript idgnl|cribi|Naga_100111g13.4980.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:98304..98570 -
KK037254.1supercontigKK037254.1:97316..98108 -
KK037254.1supercontigKK037254.1:96535..97159 -
KK037254.1supercontigKK037254.1:95979..96405 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR007603Choline_transptr-like
Homology
BLAST of EWM21181.1 vs. NCBI_GenBank
Match: gi|585101254|gb|EWM21181.1| (Choline transporter [Nannochloropsis gaditana])

HSP 1 Score: 1445.25 bits (3740), Expect = 0.000e+0
Identity = 703/703 (100.00%), Postives = 703/703 (100.00%), Query Frame = 0
Query:    1 MQKPYHVQIVYVSLLISSLDHERLNFECECGRNGQDCGAVAFVFALTQCPLHINASRATPAALMASNDRKDEWQNAPNAPSLYPQVPPQGFYAPPQNNEQGGQYNGVPPMYQPAVAQPMMVQGQPVYVQQPASGNYYTPQQVQVVQPHSQFQNPQQYPSKTGAVEMQQYRPEPQYQQPEKPLPMTQPGKPGAGETGGDTASGAASGGGDRDAAKCQDAWAAVLFLAHLGFIAYLAFARGLKALRDQDLTTDTPTTEDPTGEHYRIAESGLTSVYIGLAVVLGAAAAWSALWTGILLRNAAHIITAALIGSIISSGVGVILALVYGNFVMAIMAGLMGAIQVMWYYCVRDRIPFASMNLKCSATATLQYPSILFLAAVMTVVQMGWALLWQLAAYGVAVTKGAEIVVIEGTSFLLSQCTDTAGACACSRETAEGVVALSEAGVCKDLSEFSANVSPLIMFLLFISLFWGSLVVKNVLFCSAAGMVADWWYSGQNKGVVSKSFFRASSTSFGSICFGSLILAVLRALRQMLHAGRRQGQRENALTCVVNCLMAIIERLMQIFNRYAMVYCATYGTGFRESGTKTFELFKRAGLTAIINDDLAETALNLVALIIALLTAVVGFVYGTMFGLGGNWPVILAVVGFFAGFFVSLIVMSVLDAGVATVFVVFAEDPQAFAQSHPALYEELAQAWAKIGYDPARRSVTRV 703
            MQKPYHVQIVYVSLLISSLDHERLNFECECGRNGQDCGAVAFVFALTQCPLHINASRATPAALMASNDRKDEWQNAPNAPSLYPQVPPQGFYAPPQNNEQGGQYNGVPPMYQPAVAQPMMVQGQPVYVQQPASGNYYTPQQVQVVQPHSQFQNPQQYPSKTGAVEMQQYRPEPQYQQPEKPLPMTQPGKPGAGETGGDTASGAASGGGDRDAAKCQDAWAAVLFLAHLGFIAYLAFARGLKALRDQDLTTDTPTTEDPTGEHYRIAESGLTSVYIGLAVVLGAAAAWSALWTGILLRNAAHIITAALIGSIISSGVGVILALVYGNFVMAIMAGLMGAIQVMWYYCVRDRIPFASMNLKCSATATLQYPSILFLAAVMTVVQMGWALLWQLAAYGVAVTKGAEIVVIEGTSFLLSQCTDTAGACACSRETAEGVVALSEAGVCKDLSEFSANVSPLIMFLLFISLFWGSLVVKNVLFCSAAGMVADWWYSGQNKGVVSKSFFRASSTSFGSICFGSLILAVLRALRQMLHAGRRQGQRENALTCVVNCLMAIIERLMQIFNRYAMVYCATYGTGFRESGTKTFELFKRAGLTAIINDDLAETALNLVALIIALLTAVVGFVYGTMFGLGGNWPVILAVVGFFAGFFVSLIVMSVLDAGVATVFVVFAEDPQAFAQSHPALYEELAQAWAKIGYDPARRSVTRV
Sbjct:    1 MQKPYHVQIVYVSLLISSLDHERLNFECECGRNGQDCGAVAFVFALTQCPLHINASRATPAALMASNDRKDEWQNAPNAPSLYPQVPPQGFYAPPQNNEQGGQYNGVPPMYQPAVAQPMMVQGQPVYVQQPASGNYYTPQQVQVVQPHSQFQNPQQYPSKTGAVEMQQYRPEPQYQQPEKPLPMTQPGKPGAGETGGDTASGAASGGGDRDAAKCQDAWAAVLFLAHLGFIAYLAFARGLKALRDQDLTTDTPTTEDPTGEHYRIAESGLTSVYIGLAVVLGAAAAWSALWTGILLRNAAHIITAALIGSIISSGVGVILALVYGNFVMAIMAGLMGAIQVMWYYCVRDRIPFASMNLKCSATATLQYPSILFLAAVMTVVQMGWALLWQLAAYGVAVTKGAEIVVIEGTSFLLSQCTDTAGACACSRETAEGVVALSEAGVCKDLSEFSANVSPLIMFLLFISLFWGSLVVKNVLFCSAAGMVADWWYSGQNKGVVSKSFFRASSTSFGSICFGSLILAVLRALRQMLHAGRRQGQRENALTCVVNCLMAIIERLMQIFNRYAMVYCATYGTGFRESGTKTFELFKRAGLTAIINDDLAETALNLVALIIALLTAVVGFVYGTMFGLGGNWPVILAVVGFFAGFFVSLIVMSVLDAGVATVFVVFAEDPQAFAQSHPALYEELAQAWAKIGYDPARRSVTRV 703          
BLAST of EWM21181.1 vs. NCBI_GenBank
Match: gi|553192695|ref|XP_005855625.1| (hypothetical protein NGA_0598810 [Nannochloropsis gaditana CCMP526] >gi|422293431|gb|EKU20731.1| hypothetical protein NGA_0598810 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1310.43 bits (3390), Expect = 0.000e+0
Identity = 640/640 (100.00%), Postives = 640/640 (100.00%), Query Frame = 0
Query:   64 MASNDRKDEWQNAPNAPSLYPQVPPQGFYAPPQNNEQGGQYNGVPPMYQPAVAQPMMVQGQPVYVQQPASGNYYTPQQVQVVQPHSQFQNPQQYPSKTGAVEMQQYRPEPQYQQPEKPLPMTQPGKPGAGETGGDTASGAASGGGDRDAAKCQDAWAAVLFLAHLGFIAYLAFARGLKALRDQDLTTDTPTTEDPTGEHYRIAESGLTSVYIGLAVVLGAAAAWSALWTGILLRNAAHIITAALIGSIISSGVGVILALVYGNFVMAIMAGLMGAIQVMWYYCVRDRIPFASMNLKCSATATLQYPSILFLAAVMTVVQMGWALLWQLAAYGVAVTKGAEIVVIEGTSFLLSQCTDTAGACACSRETAEGVVALSEAGVCKDLSEFSANVSPLIMFLLFISLFWGSLVVKNVLFCSAAGMVADWWYSGQNKGVVSKSFFRASSTSFGSICFGSLILAVLRALRQMLHAGRRQGQRENALTCVVNCLMAIIERLMQIFNRYAMVYCATYGTGFRESGTKTFELFKRAGLTAIINDDLAETALNLVALIIALLTAVVGFVYGTMFGLGGNWPVILAVVGFFAGFFVSLIVMSVLDAGVATVFVVFAEDPQAFAQSHPALYEELAQAWAKIGYDPARRSVTRV 703
            MASNDRKDEWQNAPNAPSLYPQVPPQGFYAPPQNNEQGGQYNGVPPMYQPAVAQPMMVQGQPVYVQQPASGNYYTPQQVQVVQPHSQFQNPQQYPSKTGAVEMQQYRPEPQYQQPEKPLPMTQPGKPGAGETGGDTASGAASGGGDRDAAKCQDAWAAVLFLAHLGFIAYLAFARGLKALRDQDLTTDTPTTEDPTGEHYRIAESGLTSVYIGLAVVLGAAAAWSALWTGILLRNAAHIITAALIGSIISSGVGVILALVYGNFVMAIMAGLMGAIQVMWYYCVRDRIPFASMNLKCSATATLQYPSILFLAAVMTVVQMGWALLWQLAAYGVAVTKGAEIVVIEGTSFLLSQCTDTAGACACSRETAEGVVALSEAGVCKDLSEFSANVSPLIMFLLFISLFWGSLVVKNVLFCSAAGMVADWWYSGQNKGVVSKSFFRASSTSFGSICFGSLILAVLRALRQMLHAGRRQGQRENALTCVVNCLMAIIERLMQIFNRYAMVYCATYGTGFRESGTKTFELFKRAGLTAIINDDLAETALNLVALIIALLTAVVGFVYGTMFGLGGNWPVILAVVGFFAGFFVSLIVMSVLDAGVATVFVVFAEDPQAFAQSHPALYEELAQAWAKIGYDPARRSVTRV
Sbjct:    1 MASNDRKDEWQNAPNAPSLYPQVPPQGFYAPPQNNEQGGQYNGVPPMYQPAVAQPMMVQGQPVYVQQPASGNYYTPQQVQVVQPHSQFQNPQQYPSKTGAVEMQQYRPEPQYQQPEKPLPMTQPGKPGAGETGGDTASGAASGGGDRDAAKCQDAWAAVLFLAHLGFIAYLAFARGLKALRDQDLTTDTPTTEDPTGEHYRIAESGLTSVYIGLAVVLGAAAAWSALWTGILLRNAAHIITAALIGSIISSGVGVILALVYGNFVMAIMAGLMGAIQVMWYYCVRDRIPFASMNLKCSATATLQYPSILFLAAVMTVVQMGWALLWQLAAYGVAVTKGAEIVVIEGTSFLLSQCTDTAGACACSRETAEGVVALSEAGVCKDLSEFSANVSPLIMFLLFISLFWGSLVVKNVLFCSAAGMVADWWYSGQNKGVVSKSFFRASSTSFGSICFGSLILAVLRALRQMLHAGRRQGQRENALTCVVNCLMAIIERLMQIFNRYAMVYCATYGTGFRESGTKTFELFKRAGLTAIINDDLAETALNLVALIIALLTAVVGFVYGTMFGLGGNWPVILAVVGFFAGFFVSLIVMSVLDAGVATVFVVFAEDPQAFAQSHPALYEELAQAWAKIGYDPARRSVTRV 640          
BLAST of EWM21181.1 vs. NCBI_GenBank
Match: gi|553181489|ref|XP_005853576.1| (hypothetical protein NGA_0598820, partial [Nannochloropsis gaditana CCMP526] >gi|422295487|gb|EKU22786.1| hypothetical protein NGA_0598820, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1025.77 bits (2651), Expect = 0.000e+0
Identity = 508/508 (100.00%), Postives = 508/508 (100.00%), Query Frame = 0
Query:  196 GGDTASGAASGGGDRDAAKCQDAWAAVLFLAHLGFIAYLAFARGLKALRDQDLTTDTPTTEDPTGEHYRIAESGLTSVYIGLAVVLGAAAAWSALWTGILLRNAAHIITAALIGSIISSGVGVILALVYGNFVMAIMAGLMGAIQVMWYYCVRDRIPFASMNLKCSATATLQYPSILFLAAVMTVVQMGWALLWQLAAYGVAVTKGAEIVVIEGTSFLLSQCTDTAGACACSRETAEGVVALSEAGVCKDLSEFSANVSPLIMFLLFISLFWGSLVVKNVLFCSAAGMVADWWYSGQNKGVVSKSFFRASSTSFGSICFGSLILAVLRALRQMLHAGRRQGQRENALTCVVNCLMAIIERLMQIFNRYAMVYCATYGTGFRESGTKTFELFKRAGLTAIINDDLAETALNLVALIIALLTAVVGFVYGTMFGLGGNWPVILAVVGFFAGFFVSLIVMSVLDAGVATVFVVFAEDPQAFAQSHPALYEELAQAWAKIGYDPARRSVTRV 703
            GGDTASGAASGGGDRDAAKCQDAWAAVLFLAHLGFIAYLAFARGLKALRDQDLTTDTPTTEDPTGEHYRIAESGLTSVYIGLAVVLGAAAAWSALWTGILLRNAAHIITAALIGSIISSGVGVILALVYGNFVMAIMAGLMGAIQVMWYYCVRDRIPFASMNLKCSATATLQYPSILFLAAVMTVVQMGWALLWQLAAYGVAVTKGAEIVVIEGTSFLLSQCTDTAGACACSRETAEGVVALSEAGVCKDLSEFSANVSPLIMFLLFISLFWGSLVVKNVLFCSAAGMVADWWYSGQNKGVVSKSFFRASSTSFGSICFGSLILAVLRALRQMLHAGRRQGQRENALTCVVNCLMAIIERLMQIFNRYAMVYCATYGTGFRESGTKTFELFKRAGLTAIINDDLAETALNLVALIIALLTAVVGFVYGTMFGLGGNWPVILAVVGFFAGFFVSLIVMSVLDAGVATVFVVFAEDPQAFAQSHPALYEELAQAWAKIGYDPARRSVTRV
Sbjct:    1 GGDTASGAASGGGDRDAAKCQDAWAAVLFLAHLGFIAYLAFARGLKALRDQDLTTDTPTTEDPTGEHYRIAESGLTSVYIGLAVVLGAAAAWSALWTGILLRNAAHIITAALIGSIISSGVGVILALVYGNFVMAIMAGLMGAIQVMWYYCVRDRIPFASMNLKCSATATLQYPSILFLAAVMTVVQMGWALLWQLAAYGVAVTKGAEIVVIEGTSFLLSQCTDTAGACACSRETAEGVVALSEAGVCKDLSEFSANVSPLIMFLLFISLFWGSLVVKNVLFCSAAGMVADWWYSGQNKGVVSKSFFRASSTSFGSICFGSLILAVLRALRQMLHAGRRQGQRENALTCVVNCLMAIIERLMQIFNRYAMVYCATYGTGFRESGTKTFELFKRAGLTAIINDDLAETALNLVALIIALLTAVVGFVYGTMFGLGGNWPVILAVVGFFAGFFVSLIVMSVLDAGVATVFVVFAEDPQAFAQSHPALYEELAQAWAKIGYDPARRSVTRV 508          
BLAST of EWM21181.1 vs. NCBI_GenBank
Match: gi|585106633|gb|EWM24998.1| (Choline transporter [Nannochloropsis gaditana])

HSP 1 Score: 280.411 bits (716), Expect = 6.182e-81
Identity = 200/655 (30.53%), Postives = 304/655 (46.41%), Query Frame = 0
Query:   54 NASRATPAALMASNDRKDEWQNAPNAPSLYPQVPPQGFYAPPQNNEQGGQYNGVPPMYQ-PAVAQPMMVQGQPVYVQQPASGNYYTPQQVQVVQPHSQFQNPQQYPSKTGAVEMQQYRPEPQYQQPEKPLPMTQP----------GKPGAGETGGDTASGAASGGGDRDAAKCQDAWAAVLFLAHLGFIAYLAFARGLKALRDQDLTTDTPTTEDPTGEHYRIAESGLTSVYIGLAVVLGAAAAWSALWTGILLRNAAHIITAALIGSIISSGVGVILALVYGNFVMAIMAGLMGAIQVMWYYCVRDRIPFASMNLKCSATATLQYPSILFLAAVMTVVQMGWALLWQLAAYGVAVTKGAEIVVIEGTSFLLSQC-TD-----TAGACACSRETAEGVVALSEAGVCKDLSEFSANVSP-LIMFLLFISLFWGSLVVKNVLFCSAAGMVADWWYSGQNKGVVSKSFFRASSTSFGSICFGSLILAVLRALRQMLHAGRRQGQRENALTCVVNCLMAIIERLMQIFNRYAMVYCATYGTGFRESGTKTFELFKRAGLTAIINDDLAETALNLVALIIALLTAVVGFVYGTMFGLGGNWPVILAVVGFFAGFFVSLIVMSVLDAGVATVFVVFAEDPQAFAQSHPALYEELAQAWAK 690
            N  R    A M SN    +   +    +L P                    +G+P +    + A  M   G+  YV +  S   Y    V+    H+   +P  Y    G  + +  RP   +  P K +               GK       G T    + G  +  A   QD WA  LF+AHL  I +LAF  GL  L       D     D       +  S L ++  G  V    AA  S L    +L +A  +I  ALI +I    V  + A++     + I++ +  A+ + +Y  VR+RI FAS NL  +  A       + ++ ++   Q+ W  +W LA  G  + +    V   G ++   +C TD      +  C CS   AE     +  G C        +  P  I+FLL +S+FWGS+V++ ++ C+ +G+VA+WW++G  +G    +F RA +TSFGSICFG+L L+++RA  Q+L     Q  + NA TCV +CL+ +++ +   FNRYA  Y A YGT F ESG   F LFK  GLT +IND L       ++   A+L A+VG+ +   FGL G +  +LA VGF  G  V  IV+S++D+ VATVFV +A+      ++ P LY  + +AW++
Sbjct:   46 NRERQREDAQMGSNTESQQLHQSAGPGTLSP--------------------SGLPAIVAGESTASSMHDMGEDSYVGEVNSNGAY---NVEAYDLHTNAVDP--YWKWGGEAKWEGGRPA--FVDPAKKMTRQSSSNLFGKQVSIGKLSTSVQDGATTVAGSEGEVEPAATPYQDVWATFLFIAHLAIIFWLAFDWGLPLLEKDVDARDNAMQADVQ----SVQNSSLVALTTGGTVCTLGAAVLSYLTLKCVLHHARALIRGALIATIAVQIVVAVAAMLASQLWLFILSCIFAALGLCYYRLVRNRIAFASENLHVATQAIGHASGPVLVSFLVVFCQLVWQFVWTLALVGALLPQKGFTVTQGGNTYGEFECETDFSYLHDSYVCVCSHNGAEEGETTTALGRCH------VSSGPGFILFLLLVSMFWGSVVLQYIVHCTTSGVVAEWWFTGVRQGTTWPNFKRAVTTSFGSICFGALFLSIIRAAHQVLL--EMQKSKNNACTCVASCLLRLVDSIATYFNRYAFTYVAMYGTSFVESGRDAFALFKSKGLTVLINDQLVSNVFTFLSFGAAVLIALVGYGFAMAFGLDGGYKAVLAGVGFVVGLLVCAIVLSIVDSAVATVFVCWADAKDVLQKNAPELYAGMDKAWSE 661          
BLAST of EWM21181.1 vs. NCBI_GenBank
Match: gi|813163919|ref|XP_012203020.1| (hypothetical protein SPRG_08394 [Saprolegnia parasitica CBS 223.65] >gi|641532284|gb|KDO26321.1| hypothetical protein SPRG_08394 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 258.07 bits (658), Expect = 2.575e-74
Identity = 186/536 (34.70%), Postives = 264/536 (49.25%), Query Frame = 0
Query:  174 QYQQPEKPLPMTQPGKPGAGETGGDTASGAASGGGDRDAAKCQDAWAAVLFLAHLGFIAYLAFARGLKALRDQDLTTDTPTTEDPTGEHYRIAESGLTSVYIGLAVVLGAAAAWSALWTGILLRNAAHIITAALIGSI-ISSGVGVILALVYGNFVMAIMAGLMGAIQVMWYYCVRDRIPFASMNLKCSATATLQYPSILFLAAVMTVVQMGWALLWQLAAYGVAVTKGAEIVVIEGTSFLLSQCTDTAGACACSRETAEGVVALSEAGVCKDLSEFSANVSPLIMFLLFISLFWGSLVVKNVLFCSAAGMVADWWYSGQNKGVVSKSFFRASSTSFGSICFGSLILAVLRALRQMLHAGRRQGQREN---------ALTCVVNCLMAIIERLMQIFNRYAMVYCATYGTGFRESGTKTFELFKRAGLTAIINDDLAETALNLVALIIALLTAVVGFVYGTM------FGLGGNWP-----VILAVVGFFAGFFVSLIVMSVLDAGVATVFVVFAEDPQAFAQSHPALYEELAQAW 688
            QYQ  ++  PM       AG+  G  A    S   +   AKC D   A+LF+ HL  IAY AF +GL  +   +   D P  E   G    +  SG      GL   +G +  +SA+W  +L+  A H+I  AL  ++ +  G  V+   V  N +M  +   + AI + + Y V++RI FAS NLK + +A  +Y SI  +A  + V+Q+ W  +W L+  GV                   Q   TA    C+ E A G        VC   S F        MF L +S+FWG  VV+NVL  +AAG VA WWY       V  + +R+ ++SFGSICFGSLI+AVL A+R M    R Q Q+++            CV+NC    IE +M+ FN++A  Y   YG  FR SG    +LF   G TA+INDDLA TAL + A  + +L+  +G +            LG N       VI   +GF AG  +++I+ +++   + T+FV FAEDP +F ++HP  Y EL  AW
Sbjct:    3 QYQSVDQQEPML------AGDKRGGPAGPVQSMRRETATAKCNDGIFALLFIGHLVAIAYFAFTKGLDFINQYE--KDHPAPEAQKGLGVVLGVSG------GL---IGVSVLFSAIWMKLLMAFAEHMIKFALWTNVGLLFGFAVVTLFV--NPIMPFIFLFLAAINICYIYAVQNRIGFASANLKIACSALNEYVSIFGVAIFLLVIQVIWVAVWGLSTVGV------------------YQMFRTADP-HCAEEEARG-------KVCGG-SGFGVT-----MFFLLVSVFWGQQVVQNVLTTTAAGTVASWWYHSSPTSGVGGALYRSMTSSFGSICFGSLIVAVLSAMRTMARVIRNQAQQDDNAALACVACLAECVLNC----IENIMEYFNQWAYTYVGIYGFDFRTSGKAVIDLFNNRGWTAVINDDLASTALTIGAFGVGILSCCLGLLVAQFAPIHWQSQLGANMDQTTVFVIFGTIGFIAGVSMAMILANLVITALHTIFVCFAEDPMSFQRAHPEHYSELVMAW 483          
BLAST of EWM21181.1 vs. NCBI_GenBank
Match: gi|698806066|ref|XP_009836062.1| (hypothetical protein, variant [Aphanomyces astaci] >gi|574108899|gb|ETV74404.1| hypothetical protein, variant [Aphanomyces astaci])

HSP 1 Score: 256.914 bits (655), Expect = 7.193e-74
Identity = 175/529 (33.08%), Postives = 272/529 (51.42%), Query Frame = 0
Query:  174 QYQQPEKPLPMTQPGKPGAGETGGDTASGAASGGGDRDAAKCQDAWAAVLFLAHLGFIAYLAFARGLKALRDQDLTTDTPTTEDPTGEHYRIAESGLTSVYIGLAVVLGAAAAWSALWTGILLRNAAHIITAALIGSIISSGVGVILALVYGNFVMAIMAGLMGAIQVMWYYCVRDRIPFASMNLKCSATATLQYPSILFLAAVMTVVQMGWALLWQLAAYGVAVTKGAEIVVIEGTSFLLSQCTDTAGACACSRETAEGVVALSEAGVCKDLSEFSANVSPLIMFLLFISLFWGSLVVKNVLFCSAAGMVADWWYSGQNKGVVSKSFFRASSTSFGSICFGSLILAVLRALRQMLHAGRRQGQREN-----ALTCVVNCLMAIIERLMQIFNRYAMVYCATYGTGFRESGTKTFELFKRAGLTAIINDDLAETALNLVALIIALLTAVVGFVYGTM------FGLGGNWP---VILAVVGFFAGFFVSLIVMSVLDAGVATVFVVFAEDPQAFAQSHPALYEELAQAW 688
            QY+Q E  L   +P  PG    G  +     S   ++ A KC DA+ A+LF+ HL  IAY AF  GL  L+  +       +E P+    + A    T V      ++G A  +SALW  +L+  A ++I  AL  ++     G  +  ++ N  M +   L  AI + +   V++RI FAS +LK +  A   + SI  LA +   VQ+ W + W L+A GV               + L +  D     +C +E + G +    AG          NV+   +F L +S++WG  V++NV+ C+ AG VA WWY+ + +  V+ S +R+ ++SFGSICFGSLI+AVL+ALR ++   + +   ++      + C+  C++  IE L++ FN +A  Y   YG  FR +G    +LF   G TA+INDDL+ TAL++ A  + +LT V+G V           G G +     VI   +GF AGF +++I+ +++   + T+FV FAEDP +F +SHP  Y EL   W
Sbjct:    4 QYEQHEPMLGKPEPAPPGNHRHG--SPPPVHSMRLEKPAPKCNDAFFAILFVGHLVAIAYFAFTSGLDYLKHFE-------SEHPS----QAAHKSFTMVLGVSGGLIGFAVVFSALWIQVLMACAENMIRFALWMNV-GMMFGFAIMSMFVNPFMGLFFLLGAAINICYINAVQNRIAFASAHLKLACVALSNHKSIFALALLFIFVQVAWLVTWSLSAVGV---------------YQLFRSADP----SCEQEESRGELC-GGAGF---------NVT---IFFLLVSVYWGQQVIQNVMTCTVAGTVATWWYNARTESAVAGSLYRSLTSSFGSICFGSLIVAVLQALRTIVRTIKNKAAEDDNVGLACVACLAECILNCIESLVEYFNMWAYTYVGIYGFDFRSAGKAVMQLFDSRGWTAVINDDLSSTALSIGAFGVGVLTGVIGLVVAKFAPVDWTVGFGADDTTRYVIFGGLGFIAGFSMAMILANLVITALHTIFVCFAEDPVSFQRSHPEHYNELILTW 486          
BLAST of EWM21181.1 vs. NCBI_GenBank
Match: gi|1173955709|gb|OQS02637.1| (Intraflagellar Transport Protein [Thraustotheca clavata])

HSP 1 Score: 269.626 bits (688), Expect = 3.041e-73
Identity = 191/543 (35.17%), Postives = 277/543 (51.01%), Query Frame = 0
Query:  174 QYQQPEKPLPMTQPGKPGAGETGGDTASGAASGGGDRDAA---KCQDAWAAVLFLAHLGFIAYLAFARGLKALRDQDLTTDTPTTEDPTGEHYRIAESGLTSVYIGLAVVLGAAAAWSALWTGILLRNAAHIITAAL---IGSIISSGVGVILALVYGNFVMAIMAGLMGAIQVMWYYCVRDRIPFASMNLKCSATATLQYPSILFLAAVMTVVQMGWALLWQLAAYGVAVTKGAEIVVIEGTSFLLSQCTDTAGACACSRETAEGVVALSEAGVCKDLSEFSANVSPLIMFLLFISLFWGSLVVKNVLFCSAAGMVADWWYSGQNKGVVSKSFFRASSTSFGSICFGSLILAVLRALRQMLHAGRRQ-GQRENA----LTCVVNCLMAIIERLMQIFNRYAMVYCATYGTGFRESGTKTFELFKRAGLTAIINDDLAETALNLVALIIALLTAVVGFVYGTM------FGLGGNWP-----VILAVVGFFAGFFVSLIVMSVLDAGVATVFVVFAEDPQAFAQSHPALYEELAQAWAKIGYD 694
            QYQ  ++  PM           GG     AA     R  A   KC D + A+LF+ HL  I YLAF +GL  L   +    +P            A   LT+V      ++GA+  +SALW  +L+  A H+I  AL   +G ++    G  +A ++ N +M  +   M AI + + Y V++RI FAS NLK + +A     SI  +A  + +VQ+ W  +W L+A GV               + + + +D      C+ E A G      AG              + MF L IS+FWG  VV+NVL C+ AG VA WWY    +G V  + +R+ ++SFGSICFGSLI+AVL A+R + +A + Q  Q +NA    + C+V C++  IE +M+ FN++A  Y   YG  FR SG    +LF   G TA+INDDLA TAL++ AL + +L+  +G +            LG N       VIL  +GF AGF +++I+ ++L  G+ T+FV FAEDP +F ++HP  Y EL  AW     D
Sbjct:    3 QYQSVDQHEPML----------GGQKRPAAAPVESRRLEAASPKCNDWFFALLFVLHLVVIDYLAFTKGLDYLNTFEKDHPSPA-----------AGKSLTAVVGVSGGLIGASVLFSALWMKLLMAFAEHMIKFALWMNVGMLL----GFAVATLFVNPIMPFVFLFMAAINICYIYAVQNRIGFASANLKIACSAVGHNLSIFGVALFLLLVQVVWLGVWSLSAVGV---------------YQVFRKSDPN----CAAEEAHGQ-PCGGAGF------------GVTMFFLLISVFWGQQVVQNVLTCTTAGTVATWWYHQNPQGGVGGALYRSMTSSFGSICFGSLIVAVLSAMRTVANAIKNQAAQDDNAALACVACLVECILNCIESIMEYFNQWAYTYVGIYGFDFRTSGKAVMDLFNNRGWTAVINDDLASTALSIGALGVGILSCCIGLLVAQFAPIDWSAHLGQNVDHTTVFVILGTIGFIAGFSMAMILANLLITGLHTIFVCFAEDPMSFQRAHPEHYNELVVAWRHFHPD 488          
BLAST of EWM21181.1 vs. NCBI_GenBank
Match: gi|669147150|ref|XP_008609137.1| (hypothetical protein SDRG_05211 [Saprolegnia diclina VS20] >gi|530739375|gb|EQC37617.1| hypothetical protein SDRG_05211 [Saprolegnia diclina VS20])

HSP 1 Score: 251.136 bits (640), Expect = 9.189e-72
Identity = 180/535 (33.64%), Postives = 262/535 (48.97%), Query Frame = 0
Query:  174 QYQQPEKPLPMTQPGKPGAGETGGDTASGAASGGGDRDAAKCQDAWAAVLFLAHLGFIAYLAFARGLKALRDQDLTTDTPTTEDPTGEHYRIAESGLTSVYIGLAVVLGAAAAWSALWTGILLRNAAHIITAALIGSIISSGVGVILALVYGNFVMAIMAGLMGAIQVMWYYCVRDRIPFASMNLKCSATATLQYPSILFLAAVMTVVQMGWALLWQLAAYGVAVTKGAEIVVIEGTSFLLSQCTDTAGACACSRETAEGVVALSEAGVCKDLSEFSANVSPLIMFLLFISLFWGSLVVKNVLFCSAAGMVADWWYSGQNKGVVSKSFFRASSTSFGSICFGSLILAVLRALRQMLHAGRRQGQREN---------ALTCVVNCLMAIIERLMQIFNRYAMVYCATYGTGFRESGTKTFELFKRAGLTAIINDDLAETALNLVALIIALLTAVVGFVYGTM------FGLGGNWP-----VILAVVGFFAGFFVSLIVMSVLDAGVATVFVVFAEDPQAFAQSHPALYEELAQAW 688
            QYQ  ++  PM       AG+  G       S   +   AKC D   A+LF+ HL  IAY AF +GL  +   +   D P  E   G    +  SG      GL   +G +  +SA+W  +L+  A H+I  AL  ++     G  +A ++ N +M  +   + AI + + Y V++RI FAS NLK + +A  +Y SI  +A  + V+Q+ W  +W L+  GV                   Q   TA    C+ E A G  A   +G              + MF L +S+FWG  VV+NVL  + AG VA WWY       V  + +R+ ++SFGSICFGSLI+AVL A+R M    R Q Q+++            CV+NC    IE +M+ FN++A  Y   YG  FR SG    +LF   G TA+INDDLA TAL + A  + +L+  +G +            LG N       VI   +GF +G  +++I+ +++   + T+FV FAEDP +F ++HP  Y EL  AW
Sbjct:    3 QYQSVDQQEPML------AGDKRGGPTGPVQSMRREAVTAKCNDGIFALLFIGHLVAIAYFAFTKGLDFINQYE--KDHPAPEAQKGLGVVLGVSG------GL---IGVSVLFSAIWMKLLMAFAEHMIKFALWTNV-GLLFGFAVATLFVNPIMPFVFLFLAAINICYIYAVQNRIGFASANLKIACSALNEYISIFGVAIFLLVIQVIWVAVWGLSTVGV------------------YQMFRTADP-HCADEEARGR-ACGGSGF------------GVTMFFLLVSVFWGQQVVQNVLTTTTAGTVASWWYHSSPTSGVGGALYRSMTSSFGSICFGSLIVAVLSAMRTMARVIRNQAQQDDNAALACVACLAECVLNC----IENIMEYFNQWAYTYVGIYGFDFRTSGKAVIDLFNNRGWTAVINDDLASTALTIGAFGVGILSCCLGLLVAQFAPIHWQSQLGANMDQTTVFVIFGTIGFISGVSMAMILANLVITALHTIFVCFAEDPMSFQRAHPEHYSELVMAW 483          
BLAST of EWM21181.1 vs. NCBI_GenBank
Match: gi|301104838|ref|XP_002901503.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262100507|gb|EEY58559.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 250.751 bits (639), Expect = 1.446e-71
Identity = 173/526 (32.89%), Postives = 264/526 (50.19%), Query Frame = 0
Query:  205 SGGGDRD---------------AAKCQDAWAAVLFLAHLGFIAYLAFARGLKALRDQDLTTDTPTTEDPTGEHYRIAESGLTSVYIGLAVVLGAAAAWSALWTGILLRNAAHIITAALIGSIISSGVGVILALVYGNFVMAIMAGL----MGAIQVMWYYCVRDRIPFASMNLKCSATATLQYPSILFLAAVMTVVQMGWALLWQLAAYGVAVTKGAEIVVIEGTSFLLSQCTDTAGACACSRETAEGVVALSEAGVCKDLSEFSANVSPLIMFLLFISLFWGSLVVKNVLFCSAAGMVADWWYSGQNKGVVSKSFFRASSTSFGSICFGSLILAVLRALRQMLHAGRRQGQREN-----ALTCVVNCLMAIIERLMQIFNRYAMVYCATYGTGFRESGTKTFELFKRAGLTAIINDDLAETALNLVALIIALLTAVVGFV------------YGTMFGLGGNWPVILAVVGFFAGFFVSLIVMSVLDAGVATVFVVFAEDPQAFAQSHPALYEELAQAWAKIGYD 694
            SGG DR                AAKC DA+ AV+FL+++  +  LAF +G+ AL+ +D+  +      P G         +    IG+  V+G     S  W  +L+  A+ +I  AL        VG++LA     F + + A L    M AI V + Y V++RI FAS NLK +  A  Q+ ++  +A V+ + Q+ W LLW +A+ G+        V +E                 C RE        S  G+C  L  ++A      +F + +S++WG  V++N+L C+ AG+VA WWY    +     + +R+ +TSFGSICFGSLI+AVL+ALR M    +R+   EN      L C+  C++  +  +++  N +A VY   YG  FR SG    +LF   G TA+INDDL  +AL+  AL + ++T  VG +             G+  G+ G     +A++GF  G  ++LI+  V+ A + T+FV FAEDP AF ++HP  YE+L   W +   D
Sbjct:   16 SGGKDRRSPPSSAVNSLRLESPAAKCNDAFFAVMFLSNVLVLGILAFWKGVPALK-EDMGRNRSDGRIPQGH-------SVAWTMIGILCVVGTVL--SLAWIKLLMSYASSMIRVALW-----LNVGMVLAFAVSTFSVNVWAALFFLVMAAINVWYIYAVQNRIGFASANLKAACAALQQHSAVFVVAFVLVLQQLVWMLLWGVASLGM------HKVFVEADP-------------DCDREIDLASRGRSHGGLCVGLPAYAA------LFYMLVSVYWGQQVLQNILTCTTAGVVATWWYQPNAQKATVGALYRSVTTSFGSICFGSLIVAVLQALRTMADMAKRRASEENNGGLACLACMAKCILGCLANIVEYINHWAYVYVGVYGYPFRTSGKAVMDLFNNRGWTAVINDDLTSSALSFGALGVGIVTCCVGMLMVRFSPVEWFTALGSRMGVYGT----MALIGFMVGLSMALILAHVIIAALHTIFVCFAEDPVAFNRNHPKEYEDLVAGWRQFHGD 497          
BLAST of EWM21181.1 vs. NCBI_GenBank
Match: gi|698806064|ref|XP_009836061.1| (hypothetical protein H257_10993 [Aphanomyces astaci] >gi|574108898|gb|ETV74403.1| hypothetical protein H257_10993 [Aphanomyces astaci])

HSP 1 Score: 249.98 bits (637), Expect = 3.666e-71
Identity = 177/547 (32.36%), Postives = 274/547 (50.09%), Query Frame = 0
Query:  174 QYQQPEKPLPMTQPGKPGAGETGGDTASGAASGGGDRDAAKCQDAWAAVLFLAHLGFIAYLAFARGLKALRDQDLTTDTPTTEDPTGEHYRIAESGLTSVYIGLAVVLGAAAAWSALWTGILLRNAAHIITAALIGSIISSGVGVILALVYGNFVMAIMAGLMGAIQVMWYYC------------------VRDRIPFASMNLKCSATATLQYPSILFLAAVMTVVQMGWALLWQLAAYGVAVTKGAEIVVIEGTSFLLSQCTDTAGACACSRETAEGVVALSEAGVCKDLSEFSANVSPLIMFLLFISLFWGSLVVKNVLFCSAAGMVADWWYSGQNKGVVSKSFFRASSTSFGSICFGSLILAVLRALRQMLHAGRRQGQREN-----ALTCVVNCLMAIIERLMQIFNRYAMVYCATYGTGFRESGTKTFELFKRAGLTAIINDDLAETALNLVALIIALLTAVVGFVYGTM------FGLGGNWP---VILAVVGFFAGFFVSLIVMSVLDAGVATVFVVFAEDPQAFAQSHPALYEELAQAW 688
            QY+Q E  L   +P  PG    G  +     S   ++ A KC DA+ A+LF+ HL  IAY AF  GL  L+  +       +E P+    + A    T V      ++G A  +SALW  +L+  A ++I  AL  ++     G  +  ++ N  M +   L  AI +  +YC                  V++RI FAS +LK +  A   + SI  LA +   VQ+ W + W L+A GV               + L +  D     +C +E + G +    AG          NV+   +F L +S++WG  V++NV+ C+ AG VA WWY+ + +  V+ S +R+ ++SFGSICFGSLI+AVL+ALR ++   + +   ++      + C+  C++  IE L++ FN +A  Y   YG  FR +G    +LF   G TA+INDDL+ TAL++ A  + +LT V+G V           G G +     VI   +GF AGF +++I+ +++   + T+FV FAEDP +F +SHP  Y EL   W
Sbjct:    4 QYEQHEPMLGKPEPAPPGNHRHG--SPPPVHSMRLEKPAPKCNDAFFAILFVGHLVAIAYFAFTSGLDYLKHFE-------SEHPS----QAAHKSFTMVLGVSGGLIGFAVVFSALWIQVLMACAENMIRFALWMNV-GMMFGFAIMSMFVNPFMGLFFLLGAAINI--WYCRPCRHVSSHVSWTSYINAVQNRIAFASAHLKLACVALSNHKSIFALALLFIFVQVAWLVTWSLSAVGV---------------YQLFRSADP----SCEQEESRGELC-GGAGF---------NVT---IFFLLVSVYWGQQVIQNVMTCTVAGTVATWWYNARTESAVAGSLYRSLTSSFGSICFGSLIVAVLQALRTIVRTIKNKAAEDDNVGLACVACLAECILNCIESLVEYFNMWAYTYVGIYGFDFRSAGKAVMQLFDSRGWTAVINDDLSSTALSIGAFGVGVLTGVIGLVVAKFAPVDWTVGFGADDTTRYVIFGGLGFIAGFSMAMILANLVITALHTIFVCFAEDPVSFQRSHPEHYNELILTW 502          
The following BLAST results are available for this feature:
BLAST of EWM21181.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101254|gb|EWM21181.1|0.000e+0100.00Choline transporter [Nannochloropsis gaditana][more]
gi|553192695|ref|XP_005855625.1|0.000e+0100.00hypothetical protein NGA_0598810 [Nannochloropsis ... [more]
gi|553181489|ref|XP_005853576.1|0.000e+0100.00hypothetical protein NGA_0598820, partial [Nannoch... [more]
gi|585106633|gb|EWM24998.1|6.182e-8130.53Choline transporter [Nannochloropsis gaditana][more]
gi|813163919|ref|XP_012203020.1|2.575e-7434.70hypothetical protein SPRG_08394 [Saprolegnia paras... [more]
gi|698806066|ref|XP_009836062.1|7.193e-7433.08hypothetical protein, variant [Aphanomyces astaci]... [more]
gi|1173955709|gb|OQS02637.1|3.041e-7335.17Intraflagellar Transport Protein [Thraustotheca cl... [more]
gi|669147150|ref|XP_008609137.1|9.189e-7233.64hypothetical protein SDRG_05211 [Saprolegnia dicli... [more]
gi|301104838|ref|XP_002901503.1|1.446e-7132.89conserved hypothetical protein [Phytophthora infes... [more]
gi|698806064|ref|XP_009836061.1|3.666e-7132.36hypothetical protein H257_10993 [Aphanomyces astac... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9531rna9531Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications