EWM21188.1, cds9486 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21188.1 vs. NCBI_GenBank
Match: gi|585101270|gb|EWM21188.1| (deah-box rna helicase, partial [Nannochloropsis gaditana]) HSP 1 Score: 850.892 bits (2197), Expect = 0.000e+0 Identity = 423/423 (100.00%), Postives = 423/423 (100.00%), Query Frame = 0
Query: 1 HGQGEAAREGEEEGGSPGRRAGAEEGENREDERKQDGEGGVDVLPLYAMLPPKAQAAVFLPPPSPRHRRIVVATNVAETSLTLPGILYVVDCGRVKTRTFDHASGVSRYEVQWISQASADQRAGRAGRTGPGHCYRLYSSAVFSQRLSRFTAPEILNLPLEDVFLQMKALGVPLIENFPFPTPPEKKALQAAGALLGDLGAIGRREGEREGGLTSLGQGMATLPVGVRSSKMLLLGRKMLGREEGKEGEEKGGMALVVALVAGLSERDPFVFPDGREGGGGTRGGEGEGEEGEDEAGEEDEEEVLLREKARALKLERFRQWHHPTSDALARLRAVGAYTYAHSRGGSAKFCRENMLHSPTLGRIYDLRKQLSRILNRRFEKQPSYMPLHVTPGMKPPTPAQETALRQVVSHEWMAGWKDDRRE 423
HGQGEAAREGEEEGGSPGRRAGAEEGENREDERKQDGEGGVDVLPLYAMLPPKAQAAVFLPPPSPRHRRIVVATNVAETSLTLPGILYVVDCGRVKTRTFDHASGVSRYEVQWISQASADQRAGRAGRTGPGHCYRLYSSAVFSQRLSRFTAPEILNLPLEDVFLQMKALGVPLIENFPFPTPPEKKALQAAGALLGDLGAIGRREGEREGGLTSLGQGMATLPVGVRSSKMLLLGRKMLGREEGKEGEEKGGMALVVALVAGLSERDPFVFPDGREGGGGTRGGEGEGEEGEDEAGEEDEEEVLLREKARALKLERFRQWHHPTSDALARLRAVGAYTYAHSRGGSAKFCRENMLHSPTLGRIYDLRKQLSRILNRRFEKQPSYMPLHVTPGMKPPTPAQETALRQVVSHEWMAGWKDDRRE
Sbjct: 1 HGQGEAAREGEEEGGSPGRRAGAEEGENREDERKQDGEGGVDVLPLYAMLPPKAQAAVFLPPPSPRHRRIVVATNVAETSLTLPGILYVVDCGRVKTRTFDHASGVSRYEVQWISQASADQRAGRAGRTGPGHCYRLYSSAVFSQRLSRFTAPEILNLPLEDVFLQMKALGVPLIENFPFPTPPEKKALQAAGALLGDLGAIGRREGEREGGLTSLGQGMATLPVGVRSSKMLLLGRKMLGREEGKEGEEKGGMALVVALVAGLSERDPFVFPDGREGGGGTRGGEGEGEEGEDEAGEEDEEEVLLREKARALKLERFRQWHHPTSDALARLRAVGAYTYAHSRGGSAKFCRENMLHSPTLGRIYDLRKQLSRILNRRFEKQPSYMPLHVTPGMKPPTPAQETALRQVVSHEWMAGWKDDRRE 423
BLAST of EWM21188.1 vs. NCBI_GenBank
Match: gi|1173950064|gb|OQR98048.1| (ATP-dependent RNA helicase [Achlya hypogyna]) HSP 1 Score: 329.717 bits (844), Expect = 1.886e-98 Identity = 177/396 (44.70%), Postives = 241/396 (60.86%), Query Frame = 0
Query: 31 DERKQDGEGG-------VDVLPLYAMLPPKAQAAVFLPPPSPRHRRIVVATNVAETSLTLPGILYVVDCGRVKTRTFDHASGVSRYEVQWISQASADQRAGRAGRTGPGHCYRLYSSAVFSQRLSRFTAPEILNLPLEDVFLQMKALGVPLIENFPFPTPPEKKALQAAGALLGDLGAIGRREGEREGGLTSLGQGMATLPVGVRSSKMLLLGRKMLGREEGKEGEEKGGMALVVALVAGLSERDPFVFPDGREGGGGTRGGEGEGEEGEDEAGEEDEEEVLLREKARALKLERFRQWHHPTSDALARLRAVGAYTYAHSRGGSAKFCRENMLHSPTLGRIYDLRKQLSRILNRRFEKQPSYMPLHVTPGMKPPTPAQETALRQVVSHEWMAGWKD 419
D +D EG V VLPLY+ML Q VF PP +HR IVVATNVAETSLT+PG+ YVVD GR K R FD +G+S + VQWIS+ASADQRAGRAGRTGPGHCYRLYSSAV+ +F+ P++L P+EDV LQMKA+G+ I +FPFPTPPE AL+AA +L LGA+ E+ +TSLG+ +A PV R +KMLL+ + E G + ++A+VA L+ + PFV R + E + E + ++ + + +E A ++ + QW SD L+ LRA GAY Y+ GGSA FC++N LH+ + + LR QL+ I+N+ F P+Y P+ + P M PPTP ++ +RQ+V+ AG+ D
Sbjct: 669 DHNPEDDEGSAENSTPYVHVLPLYSMLANDEQMKVFDAPPE-KHRLIVVATNVAETSLTIPGVRYVVDAGRTKERVFDLKTGISEFTVQWISKASADQRAGRAGRTGPGHCYRLYSSAVYENEFPKFSPPQLLCQPIEDVVLQMKAMGIERILDFPFPTPPESVALKAAMMMLMHLGAL----NEKTDTITSLGKTLAQFPVAARFAKMLLIAK------------EVGCLEYIIAVVASLTGQPPFVLALER------KEQEADAEPSPETISPDEMDADMAKEWKEAEEMRKHSQWVDEESDVLSMLRAAGAYAYS---GGSAAFCQDNHLHAKIMEQTLKLRGQLTSIVNKLFASDPTYSPVSLRPDMPPPTPEEQDTIRQIVA----AGYLD 1034
BLAST of EWM21188.1 vs. NCBI_GenBank
Match: gi|1173941617|gb|OQR90741.1| (ATP-dependent RNA helicase, partial [Thraustotheca clavata]) HSP 1 Score: 326.25 bits (835), Expect = 9.903e-97 Identity = 172/379 (45.38%), Postives = 237/379 (62.53%), Query Frame = 0
Query: 41 VDVLPLYAMLPPKAQAAVFLPPPSPRHRRIVVATNVAETSLTLPGILYVVDCGRVKTRTFDHASGVSRYEVQWISQASADQRAGRAGRTGPGHCYRLYSSAVFSQRLSRFTAPEILNLPLEDVFLQMKALGVPLIENFPFPTPPEKKALQAAGALLGDLGAIGRREGEREGGLTSLGQGMATLPVGVRSSKMLLLGRKMLGREEGKEGEEKGGMALVVALVAGLSERDPFVFPDGREGGGGTRGGEGEGEEGEDEAGEEDEEEVLLREKARALKLERFRQWHHPTSDALARLRAVGAYTYAHSRGGSAKFCRENMLHSPTLGRIYDLRKQLSRILNRRFEKQPSYMPLHVTPGMKPPTPAQETALRQVVSHEWMAGWKD 419
V VLPLY+ML Q VF PP +HR IVVATNVAETSLT+PG+ YVVD GR K R +D +G+S ++VQWIS+ASADQRAGRAGRTGPGHCYRLYSSAV+ +F+ P++L P+EDV LQMKA+G+ I NFPFPTPPE AL++A A+L LGA+ +TSLG+ +A PV R +KMLL+ +++ G + V+A+VA L+ + PFV R+ E E+ + E+ +E + +E A ++ + QW SD L+ LRA GAY Y+ GGS+ FC EN LH+ + ++ LR QL+ I+N+ F + Y P+ + P M PP+P ++ +RQ+V+ AG+ D
Sbjct: 607 VHVLPLYSMLANDEQMKVFEAPPE-KHRLIVVATNVAETSLTIPGVRYVVDAGRTKERVYDLKTGISEFKVQWISKASADQRAGRAGRTGPGHCYRLYSSAVYENEFPKFSPPQLLCQPIEDVVLQMKAMGIERILNFPFPTPPESVALKSAMAMLVHLGALNM----TNDTITSLGKTLAQFPVAARFAKMLLIAKQV------------GCLEYVIAVVASLTGQSPFVLALERKEKEA-----DELEQNGETISPEEMDEDMAKEWKEAEEMRKHGQWIDEESDVLSMLRAAGAYAYS---GGSSAFCEENHLHAKVMEQMLKLRSQLTTIVNKLFASEADYTPISLRPNMPPPSPEEQDTIRQIVA----AGYLD 956
BLAST of EWM21188.1 vs. NCBI_GenBank
Match: gi|1214692007|gb|OWZ06755.1| (ATP-dependent RNA helicase [Phytophthora megakarya]) HSP 1 Score: 318.931 bits (816), Expect = 4.108e-95 Identity = 174/378 (46.03%), Postives = 237/378 (62.70%), Query Frame = 0
Query: 43 VLPLYAMLPPKAQAAVFLPPPSPRHRRIVVATNVAETSLTLPGILYVVDCGRVKTRTFDHASGVSRYEVQWISQASADQRAGRAGRTGPGHCYRLYSSAVFSQRLSRFTAPEILNLPLEDVFLQMKALGVPLIENFPFPTPPEKKALQAAGALLGDLGAIGRREGEREGGLTSLGQGMATLPVGVRSSKMLLLGRKMLGREEGKEGEEKGGMALVVALVAGLSERDPFVFP-DGREGGGGTRGGEGEGEEGEDEAGEEDEEEVLLREKARALKLERFRQWHHPTSDALARLRAVGAYTYAHSRGGSAKFCRENMLHSPTLGRIYDLRKQLSRILNRRFEKQPSYMPLHVTPGMKPPTPAQETALRQVVSHEWMAGWKD 419
VLPLY++LP Q VF PP HR +VVATNVAETSLT+PGI YVVD GR K R FD A+G+S +EVQWIS+ASADQRAGRAGRTGPGHCYRLYSSAV+ +F++PEIL P++D+ LQMKA+G+ + FPFPTPP+++A++ A A L +LGA+ E +T LG+ + PV R +KMLLL +K+ + +A+VAGLS PF+ D RE G +G+G++ E E E++ E A ++ + QW SD L+ LRA GAY Y GGS++FC++N LH T+ + LR+QL+RI+N+ + +Q Y + + P M PP + LRQ+V+ AG+ D
Sbjct: 569 VLPLYSLLPNDEQMKVFDTPPE-NHRLVVVATNVAETSLTIPGIKYVVDAGRTKERVFDLANGISSFEVQWISKASADQRAGRAGRTGPGHCYRLYSSAVYDTEFQKFSSPEILCQPIDDLVLQMKAMGIHNVSQFPFPTPPDRQAVKNALATLVNLGAVSPGNDE---SITGLGRSLVKFPVAARFAKMLLLAQKL------------NLVEYTIAIVAGLSGHSPFIHALDRREKEKGVDEEDGDGKKSEMEEMEKEWRE--------AEEMRKHAQWIDQESDVLSLLRAAGAYAYT---GGSSQFCKDNHLHEKTMQNMLKLRQQLTRIVNKLYAEQEGYASIELKPKMPPPDLETQVVLRQIVA----AGFLD 915
BLAST of EWM21188.1 vs. NCBI_GenBank
Match: gi|673026042|ref|XP_008866982.1| (hypothetical protein, variant 7 [Aphanomyces invadans] >gi|673026044|ref|XP_008866983.1| hypothetical protein, variant 8 [Aphanomyces invadans] >gi|574477029|gb|ETW04026.1| hypothetical protein, variant 7 [Aphanomyces invadans] >gi|574477030|gb|ETW04027.1| hypothetical protein, variant 8 [Aphanomyces invadans]) HSP 1 Score: 309.686 bits (792), Expect = 3.649e-92 Identity = 170/386 (44.04%), Postives = 223/386 (57.77%), Query Frame = 0
Query: 41 VDVLPLYAMLPPKAQAAVFLPPPSPRHRRIVVATNVAETSLTLPGILYVVDCGRVKTRTFDHASGVSRYEVQWISQASADQRAGRAGRTGPGHCYRLYSSAVFSQRLSRFTAPEILNLPLEDVFLQMKALGVPLIENFPFPTPPEKKALQAAGALLGDLGAIGRREGEREGGLTSLGQGMATLPVGVRSSKMLLLGRKMLGREEGKEGEEKGGMALVVALVAGLSERDPFVFPDGREGGGGTRGGEGEGE----EGEDEAGEEDEEEVLLREKARALKLERFRQWHHPTSDALARLRAVGAYTYAHSRGGSAKFCRENMLHSPTLGRIYDLRKQLSRILNRRFEKQPSYMPLHVTPGMKPPTPAQETALRQVVSHEWMAGWKDDRR 422
V VLPLY+ML Q VF PP P+HR ++VATNVAETSLT+PG+ YVVD GR K R FD SG+S+++VQWIS+ASADQRAGRAGRTGPGHCYRLYSSAVF F+ P+IL P+EDV LQMKA+G+ I FPFPTPPE AL AA L LGA+ R +T LG+ +A PV R +KMLLL +++ G + +A+VA LS + PF+ R+ + + + + A E + E A ++R QW SD L+ LRA GAY Y+ GGS FC EN LH + ++ LR QL+ I+N+ L + P M PP+ + LRQ+++ W++ RR
Sbjct: 702 VHVLPLYSMLANDDQMKVFEAPP-PKHRLVIVATNVAETSLTIPGVRYVVDAGRTKERVFDLKSGISQFQVQWISKASADQRAGRAGRTGPGHCYRLYSSAVFDNEFKTFSPPQILCQPIEDVVLQMKAMGIENILQFPFPTPPEAIALHAAVTTLLHLGALDR----TTNSITGLGKTLAGFPVAPRFAKMLLLAQQV------------GCLEYAIAVVASLSGQSPFILERERKETQKFQKEDATNDTLPTDASTAADTETRIDAWTEELQEAEAMKRHTQWIDNDSDVLSMLRAAGAYAYS---GGSTSFCAENHLHEKIMEQMLKLRGQLTTIVNKLV----GATALTLRPNMPPPSDDDQDLLRQIIAAGWLSSIAQSRR 1063
BLAST of EWM21188.1 vs. NCBI_GenBank
Match: gi|673026040|ref|XP_008866981.1| (hypothetical protein, variant 6 [Aphanomyces invadans] >gi|574477028|gb|ETW04025.1| hypothetical protein, variant 6 [Aphanomyces invadans]) HSP 1 Score: 309.301 bits (791), Expect = 5.368e-92 Identity = 171/386 (44.30%), Postives = 223/386 (57.77%), Query Frame = 0
Query: 41 VDVLPLYAMLPPKAQAAVFLPPPSPRHRRIVVATNVAETSLTLPGILYVVDCGRVKTRTFDHASGVSRYEVQWISQASADQRAGRAGRTGPGHCYRLYSSAVFSQRLSRFTAPEILNLPLEDVFLQMKALGVPLIENFPFPTPPEKKALQAAGALLGDLGAIGRREGEREGGLTSLGQGMATLPVGVRSSKMLLLGRKMLGREEGKEGEEKGGMALVVALVAGLSERDPFVFPDGREGGGGTRGGEGEGE----EGEDEAGEEDEEEVLLREKARALKLERFRQWHHPTSDALARLRAVGAYTYAHSRGGSAKFCRENMLHSPTLGRIYDLRKQLSRILNRRFEKQPSYMPLHVTPGMKPPTPAQETALRQVVSHEWMAGWKDDRR 422
V VLPLY+ML Q VF PP P+HR ++VATNVAETSLT+PG+ YVVD GR K R FD SG+S+++VQWIS+ASADQRAGRAGRTGPGHCYRLYSSAVF F+ P+IL P+EDV LQMKA+G+ I FPFPTPPE AL AA L LGA+ R +T LG+ +A PV R +KMLLL +++ G + +A+VA LS + PF+ R+ + + + + A E + E A ++R QW SD L+ LRA GAY Y+ GGS FC EN LH + ++ LR QL+ I+N K L + P M PP+ + LRQ+++ W++ RR
Sbjct: 721 VHVLPLYSMLANDDQMKVFEAPP-PKHRLVIVATNVAETSLTIPGVRYVVDAGRTKERVFDLKSGISQFQVQWISKASADQRAGRAGRTGPGHCYRLYSSAVFDNEFKTFSPPQILCQPIEDVVLQMKAMGIENILQFPFPTPPEAIALHAAVTTLLHLGALDR----TTNSITGLGKTLAGFPVAPRFAKMLLLAQQV------------GCLEYAIAVVASLSGQSPFILERERKETQKFQKEDATNDTLPTDASTAADTETRIDAWTEELQEAEAMKRHTQWIDNDSDVLSMLRAAGAYAYS---GGSTSFCAENHLHEKIMEQMLKLRGQLTTIVN----KLVGATALTLRPNMPPPSDDDQDLLRQIIAAGWLSSIAQSRR 1082
BLAST of EWM21188.1 vs. NCBI_GenBank
Match: gi|669146424|ref|XP_008608774.1| (adenosinetriphosphatase [Saprolegnia diclina VS20] >gi|530739599|gb|EQC37841.1| adenosinetriphosphatase [Saprolegnia diclina VS20]) HSP 1 Score: 308.916 bits (790), Expect = 4.390e-91 Identity = 175/409 (42.79%), Postives = 240/409 (58.68%), Query Frame = 0
Query: 19 RRAGAEEGENREDERKQDGEGG--------VDVLPLYAMLPPKAQAAVFLPPPSPRHRRIVVATNVAETSLTLPGILYVVDCGRVKTRTFDHASGVSRYEVQWISQASADQRAGRAGRTGPGHCYRLYSSAVFSQRLSRFTAPEILNLPLEDVFLQMKALGVPLIENFPFPTPPEKKALQAAGALLGDLGAIGRREGEREGGLTSLGQGMATLPVGVRSSKMLLLGRKMLGREEGKEGEEKGGMALVVALVAGLSERDPFVFPDGREGGGGTRGGEGEGEEGEDEAGEEDEEEVLLREKARALKLERFRQWHHPTSDALARLRAVGAYTYAHSRGGSAKFCRENMLHSPTLGRIYDLRKQLSRILNRRFEKQPSYMPLHVTPGMKPPTPAQETALRQVVSHEWMAGWKD 419
+ + A + E D + +D E G V VLPLY+ML Q VF PP P+HR IVVATNVAETSLT+PG+ YVVD GR K R FD +G+S ++VQWIS+ASADQRAGRAGRTGPGHCYRLYSSAV+ +F+ P++L P+EDV LQMKA+G+ I NFPFPTPPE AL+AA L LGA+ +TSLG+ +A PV R +KMLL+ +++ G + ++A+VA L+ + PFV R+ E +E ++ + +E A ++ + QW SD L LRA GAY Y+ + FC EN LH+ + ++ LR QL+ I+N+ F SY P+ + P M PP+P ++ +RQ+V+ AG+ D
Sbjct: 643 KDSDASDSEEENDHQPEDDEEGSTENSTPYVHVLPLYSMLANDEQMKVFEAPP-PKHRLIVVATNVAETSLTIPGVRYVVDAGRTKERVFDLKTGISEFQVQWISKASADQRAGRAGRTGPGHCYRLYSSAVYENEFPKFSPPQLLTQPIEDVILQMKAMGIERILNFPFPTPPEAVALKAAMTTLMHLGALNM----ENDTITSLGRTLALFPVAARFAKMLLIAKQV------------GCLEYIIAVVASLTGQPPFVLAVERKDQEADADAPDEPVISPEEMSDD-----MAKEWKEAEEMRKHSQWVDEESDVLGMLRAAGAYAYSGASPA---FCDENHLHAKIMEQMLKLRSQLTLIVNKLFASDASYTPVALHPNMPPPSPEEQDTIRQIVA----AGYLD 1022
BLAST of EWM21188.1 vs. NCBI_GenBank
Match: gi|566012507|gb|ETI35418.1| (hypothetical protein F443_18237 [Phytophthora parasitica P1569] >gi|567949935|gb|ETK75656.1| hypothetical protein L915_17762 [Phytophthora parasitica] >gi|567978599|gb|ETL29086.1| hypothetical protein L916_17663 [Phytophthora parasitica] >gi|568037988|gb|ETM35537.1| hypothetical protein L914_17575 [Phytophthora parasitica] >gi|570939980|gb|ETP05237.1| hypothetical protein F441_18112 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 308.916 bits (790), Expect = 9.214e-91 Identity = 179/399 (44.86%), Postives = 247/399 (61.90%), Query Frame = 0
Query: 24 EEGENREDERKQDGEGGV---DVLPLYAMLPPKAQAAVFLPPPSPRHRRIVVATNVAETSLTLPGILYVVDCGRVKTRTFDHASGVSRYEVQWISQASADQRAGRAGRTGPGHCYRLYSSAVFSQRLSRFTAPEILNLPLEDVFLQMKALGVPLIENFPFPTPPEKKALQAAGALLGDLGAIGRREGEREGGLTSLGQGMATLPVGVRSSKMLLLGRKMLGREEGKEGEEKGGMALVVALVAGLSERDPFVFPDGREGGGGTRGGEGEGEEGEDEAGEEDEEEVLLREKARALKLERFRQWHHPTSDALARLRAVGAYTYAHSRGGSAKFCRENMLHSPTLGRIYDLRKQLSRILNRRFEKQPSYMPLHVTPGMKPPTPAQETALRQVVSHEWMAGWKD 419
EE +N +DE ++ + V VLPLY++LP Q VF PP HR +VVATNVAETSLT+PGI YVVD GR K R FD A+G+S +EVQWIS+ASADQRAGRAGRTGPGHCYRLYSSAV+ +F++PEIL P++D+ LQMKA+G+ + FPFPTPP+++A++ A A L +LGA+ + E +T LG+ + PV R +KMLLL +K+ + +A+VAGLS PF+ R R E EE ++E E +E E RE A ++ + QW SD L+ LRA GAY Y GGS++FC++N LH T+ + LR+QL+RI+N+ + ++ + + + P M PP + LRQ+V+ AG+ D
Sbjct: 715 EEEQNSDDEDEEMEKLAVPYLHVLPLYSLLPNDEQMKVFDTPPE-NHRLVVVATNVAETSLTIPGIKYVVDAGRTKERVFDLANGISSFEVQWISKASADQRAGRAGRTGPGHCYRLYSSAVYDTEFQKFSSPEILCQPIDDLVLQMKAMGIHNVLQFPFPTPPDRQAVKNALATLVNLGAVSPGDDE---AITGLGRALVKFPVAARFAKMLLLAQKL------------NVVEYTIAIVAGLSGHSPFIHALDR------REKEKNEEENDEEKSEMEEMEKEWRE---AEEMRKHAQWIDQESDVLSLLRAAGAYAYT---GGSSQFCKDNHLHEKTMQNMLKLRQQLTRIVNKLYAEEDA---IELKPKMPPPDLETQVVLRQIVA----AGFLD 1078
BLAST of EWM21188.1 vs. NCBI_GenBank
Match: gi|635359016|emb|CCI50679.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 305.834 bits (782), Expect = 1.741e-90 Identity = 170/422 (40.28%), Postives = 239/422 (56.64%), Query Frame = 0
Query: 3 QGEAAREGEEEGGSPGRRAGAEEGENREDERKQDGEGGV---DVLPLYAMLPPKAQAAVFLPPPSPRHRRIVVATNVAETSLTLPGILYVVDCGRVKTRTFDHASGVSRYEVQWISQASADQRAGRAGRTGPGHCYRLYSSAVFSQRLSRFTAPEILNLPLEDVFLQMKALGVPLIENFPFPTPPEKKALQAAGALLGDLGAIGRREGEREGG--LTSLGQGMATLPVGVRSSKMLLLGRKMLGREEGKEGEEKGGMALVVALVAGLSERDPFVFPDGREGGGGTRGGEGEGEEGEDEAGEEDEEEVLLREKARALKLERFRQWHHPTSDALARLRAVGAYTYAHSRGGSAKFCRENMLHSPTLGRIYDLRKQLSRILNRRFEKQPSYMPLHVTPGMKPPTPAQETALRQVVSHEWMAGWKD 419
+A + + E G + ++ G + +R + V LPLY++LP Q VF PP HR +V+AT++AETSLT+P I YVVD GR KTR ++ +G+S +++QWIS+ASADQRA RAGRTGPGHCYRLYSSAV+ S+FT PEIL P+E++ LQMKA+G+ I FPFPTPP++ A A L LGAI ++ E +T LGQ + PV R +KMLL+ ++M G + +A+VAGLS PFV E E E+ DE + E +A L R QW + SD L+ LRA GAY Y G S+ FC+EN LH + ++ LR+QL+RI+N + + S+ + ++P + PP+ E LRQ+++ AG+ D
Sbjct: 508 HDDAEEDVDIEPGEEAEQYDSDHGSQIDSDRDANDSLAVPYMHALPLYSLLPTNEQMRVFDEPPE-HHRLVVIATDIAETSLTIPNIKYVVDAGRTKTRVYNLENGISNFQIQWISKASADQRAVRAGRTGPGHCYRLYSSAVYDTDFSKFTPPEILCHPIEEIVLQMKAMGIHTISKFPFPTPPDRHAFVKAIQTLEYLGAITVQQTEDSAKEEITRLGQLLVQFPVTARFAKMLLVAKEM------------GVLEYTIAIVAGLSGHSPFV-----------TTSEEESEKHIDE---------MTAEWHKADTLRRRLQWANTQSDLLSFLRAAGAYAYG---GCSSSFCKENFLHEKIMSQMLQLRQQLTRIVNTLYAEDESFTKITLSPYLDPPSLPTEDVLRQIIA----AGFMD 889
BLAST of EWM21188.1 vs. NCBI_GenBank
Match: gi|325183207|emb|CCA17666.1| (hypothetical protein BRAFLDRAFT_265555 [Albugo laibachii Nc14]) HSP 1 Score: 306.22 bits (783), Expect = 4.453e-90 Identity = 164/381 (43.04%), Postives = 227/381 (59.58%), Query Frame = 0
Query: 41 VDVLPLYAMLPPKAQAAVFLPPPSPRHRRIVVATNVAETSLTLPGILYVVDCGRVKTRTFDHASGVSRYEVQWISQASADQRAGRAGRTGPGHCYRLYSSAVFSQRLSRFTAPEILNLPLEDVFLQMKALGVPLIENFPFPTPPEKKALQAAGALLGDLGAIGRREG--EREGGLTSLGQGMATLPVGVRSSKMLLLGRKMLGREEGKEGEEKGGMALVVALVAGLSERDPFVFPDGREGGGGTRGGEGEGEEGEDEAGEEDEEEVLLREKARALKLERFRQWHHPTSDALARLRAVGAYTYAHSRGGSAKFCRENMLHSPTLGRIYDLRKQLSRILNRRFEKQPSYMPLHVTPGMKPPTPAQETALRQVVSHEWMAGWKD 419
+ LPLY++LPP Q VF PP HR +VVAT++AETSLT+P I YVVD GR K+R ++ +G+S +++QWIS+ASADQRAGRAGRTGPGHCYRLYSSAV+ +FT PEIL P+E+V LQMKA+G+ + FPFPTPP++ A A LL LGAI + + +T LGQ + PV R +KMLLL ++M G + +A+VAGLS PFV T E ++ DE E E+ ++ L R QW +P SD L+ LRA GAY Y S+ FC+EN LH + ++ LR+QL+RI+N + ++ + + ++ + PP+P E LRQ+++ AG+ D
Sbjct: 692 IHALPLYSLLPPSEQMRVFDEPPE-HHRLVVVATDIAETSLTIPNIKYVVDAGRTKSRVYNLDNGISNFQIQWISKASADQRAGRAGRTGPGHCYRLYSSAVYDTDFPKFTPPEILCHPIEEVVLQMKAMGIHNVSKFPFPTPPDRHAFVKAVQLLEYLGAITVEQSADSTKEEITRLGQLLVQFPVTARFAKMLLLAKEM------------GVLEYTIAIVAGLSGHSPFV----------TMLEEEPSDQCTDELAE---------ERRKSDMLNRRLQWANPQSDLLSLLRAAGAYAY---ESCSSSFCKENFLHEKLMSQMLQLRQQLTRIVNTLYAEEEGFTKIALSSHLDPPSPPTEDVLRQIIA----AGFMD 1033 The following BLAST results are available for this feature:
BLAST of EWM21188.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|