EWM21188.1, cds9486 (CDS) Nannochloropsis gaditana

Overview
NameEWM21188.1
Unique Namecds9486
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037254.1:44360..44690 -
Alignment locationKK037254.1:43867..44033 -
Alignment locationKK037254.1:43161..43695 -
Alignment locationKK037254.1:42856..42952 -
Alignment locationKK037254.1:42555..42696 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21188.1
Productdeah-box rna helicase
Partialtrue
Orig transcript idgnl|cribi|Naga_100624g2.2157.mrna
GbkeyCDS
End range.
End range44690
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:44360..44690 -
KK037254.1supercontigKK037254.1:43867..44033 -
KK037254.1supercontigKK037254.1:43161..43695 -
KK037254.1supercontigKK037254.1:42856..42952 -
KK037254.1supercontigKK037254.1:42555..42696 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0004386helicase activity
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR007502Helicase-assoc_dom
IPR001650Helicase_C
Homology
BLAST of EWM21188.1 vs. NCBI_GenBank
Match: gi|585101270|gb|EWM21188.1| (deah-box rna helicase, partial [Nannochloropsis gaditana])

HSP 1 Score: 850.892 bits (2197), Expect = 0.000e+0
Identity = 423/423 (100.00%), Postives = 423/423 (100.00%), Query Frame = 0
Query:    1 HGQGEAAREGEEEGGSPGRRAGAEEGENREDERKQDGEGGVDVLPLYAMLPPKAQAAVFLPPPSPRHRRIVVATNVAETSLTLPGILYVVDCGRVKTRTFDHASGVSRYEVQWISQASADQRAGRAGRTGPGHCYRLYSSAVFSQRLSRFTAPEILNLPLEDVFLQMKALGVPLIENFPFPTPPEKKALQAAGALLGDLGAIGRREGEREGGLTSLGQGMATLPVGVRSSKMLLLGRKMLGREEGKEGEEKGGMALVVALVAGLSERDPFVFPDGREGGGGTRGGEGEGEEGEDEAGEEDEEEVLLREKARALKLERFRQWHHPTSDALARLRAVGAYTYAHSRGGSAKFCRENMLHSPTLGRIYDLRKQLSRILNRRFEKQPSYMPLHVTPGMKPPTPAQETALRQVVSHEWMAGWKDDRRE 423
            HGQGEAAREGEEEGGSPGRRAGAEEGENREDERKQDGEGGVDVLPLYAMLPPKAQAAVFLPPPSPRHRRIVVATNVAETSLTLPGILYVVDCGRVKTRTFDHASGVSRYEVQWISQASADQRAGRAGRTGPGHCYRLYSSAVFSQRLSRFTAPEILNLPLEDVFLQMKALGVPLIENFPFPTPPEKKALQAAGALLGDLGAIGRREGEREGGLTSLGQGMATLPVGVRSSKMLLLGRKMLGREEGKEGEEKGGMALVVALVAGLSERDPFVFPDGREGGGGTRGGEGEGEEGEDEAGEEDEEEVLLREKARALKLERFRQWHHPTSDALARLRAVGAYTYAHSRGGSAKFCRENMLHSPTLGRIYDLRKQLSRILNRRFEKQPSYMPLHVTPGMKPPTPAQETALRQVVSHEWMAGWKDDRRE
Sbjct:    1 HGQGEAAREGEEEGGSPGRRAGAEEGENREDERKQDGEGGVDVLPLYAMLPPKAQAAVFLPPPSPRHRRIVVATNVAETSLTLPGILYVVDCGRVKTRTFDHASGVSRYEVQWISQASADQRAGRAGRTGPGHCYRLYSSAVFSQRLSRFTAPEILNLPLEDVFLQMKALGVPLIENFPFPTPPEKKALQAAGALLGDLGAIGRREGEREGGLTSLGQGMATLPVGVRSSKMLLLGRKMLGREEGKEGEEKGGMALVVALVAGLSERDPFVFPDGREGGGGTRGGEGEGEEGEDEAGEEDEEEVLLREKARALKLERFRQWHHPTSDALARLRAVGAYTYAHSRGGSAKFCRENMLHSPTLGRIYDLRKQLSRILNRRFEKQPSYMPLHVTPGMKPPTPAQETALRQVVSHEWMAGWKDDRRE 423          
BLAST of EWM21188.1 vs. NCBI_GenBank
Match: gi|1173950064|gb|OQR98048.1| (ATP-dependent RNA helicase [Achlya hypogyna])

HSP 1 Score: 329.717 bits (844), Expect = 1.886e-98
Identity = 177/396 (44.70%), Postives = 241/396 (60.86%), Query Frame = 0
Query:   31 DERKQDGEGG-------VDVLPLYAMLPPKAQAAVFLPPPSPRHRRIVVATNVAETSLTLPGILYVVDCGRVKTRTFDHASGVSRYEVQWISQASADQRAGRAGRTGPGHCYRLYSSAVFSQRLSRFTAPEILNLPLEDVFLQMKALGVPLIENFPFPTPPEKKALQAAGALLGDLGAIGRREGEREGGLTSLGQGMATLPVGVRSSKMLLLGRKMLGREEGKEGEEKGGMALVVALVAGLSERDPFVFPDGREGGGGTRGGEGEGEEGEDEAGEEDEEEVLLREKARALKLERFRQWHHPTSDALARLRAVGAYTYAHSRGGSAKFCRENMLHSPTLGRIYDLRKQLSRILNRRFEKQPSYMPLHVTPGMKPPTPAQETALRQVVSHEWMAGWKD 419
            D   +D EG        V VLPLY+ML    Q  VF  PP  +HR IVVATNVAETSLT+PG+ YVVD GR K R FD  +G+S + VQWIS+ASADQRAGRAGRTGPGHCYRLYSSAV+     +F+ P++L  P+EDV LQMKA+G+  I +FPFPTPPE  AL+AA  +L  LGA+     E+   +TSLG+ +A  PV  R +KMLL+ +            E G +  ++A+VA L+ + PFV    R      +  E + E   +    ++ +  + +E   A ++ +  QW    SD L+ LRA GAY Y+   GGSA FC++N LH+  + +   LR QL+ I+N+ F   P+Y P+ + P M PPTP ++  +RQ+V+    AG+ D
Sbjct:  669 DHNPEDDEGSAENSTPYVHVLPLYSMLANDEQMKVFDAPPE-KHRLIVVATNVAETSLTIPGVRYVVDAGRTKERVFDLKTGISEFTVQWISKASADQRAGRAGRTGPGHCYRLYSSAVYENEFPKFSPPQLLCQPIEDVVLQMKAMGIERILDFPFPTPPESVALKAAMMMLMHLGAL----NEKTDTITSLGKTLAQFPVAARFAKMLLIAK------------EVGCLEYIIAVVASLTGQPPFVLALER------KEQEADAEPSPETISPDEMDADMAKEWKEAEEMRKHSQWVDEESDVLSMLRAAGAYAYS---GGSAAFCQDNHLHAKIMEQTLKLRGQLTSIVNKLFASDPTYSPVSLRPDMPPPTPEEQDTIRQIVA----AGYLD 1034          
BLAST of EWM21188.1 vs. NCBI_GenBank
Match: gi|1173941617|gb|OQR90741.1| (ATP-dependent RNA helicase, partial [Thraustotheca clavata])

HSP 1 Score: 326.25 bits (835), Expect = 9.903e-97
Identity = 172/379 (45.38%), Postives = 237/379 (62.53%), Query Frame = 0
Query:   41 VDVLPLYAMLPPKAQAAVFLPPPSPRHRRIVVATNVAETSLTLPGILYVVDCGRVKTRTFDHASGVSRYEVQWISQASADQRAGRAGRTGPGHCYRLYSSAVFSQRLSRFTAPEILNLPLEDVFLQMKALGVPLIENFPFPTPPEKKALQAAGALLGDLGAIGRREGEREGGLTSLGQGMATLPVGVRSSKMLLLGRKMLGREEGKEGEEKGGMALVVALVAGLSERDPFVFPDGREGGGGTRGGEGEGEEGEDEAGEEDEEEVLLREKARALKLERFRQWHHPTSDALARLRAVGAYTYAHSRGGSAKFCRENMLHSPTLGRIYDLRKQLSRILNRRFEKQPSYMPLHVTPGMKPPTPAQETALRQVVSHEWMAGWKD 419
            V VLPLY+ML    Q  VF  PP  +HR IVVATNVAETSLT+PG+ YVVD GR K R +D  +G+S ++VQWIS+ASADQRAGRAGRTGPGHCYRLYSSAV+     +F+ P++L  P+EDV LQMKA+G+  I NFPFPTPPE  AL++A A+L  LGA+          +TSLG+ +A  PV  R +KMLL+ +++            G +  V+A+VA L+ + PFV    R+          E E+  +    E+ +E + +E   A ++ +  QW    SD L+ LRA GAY Y+   GGS+ FC EN LH+  + ++  LR QL+ I+N+ F  +  Y P+ + P M PP+P ++  +RQ+V+    AG+ D
Sbjct:  607 VHVLPLYSMLANDEQMKVFEAPPE-KHRLIVVATNVAETSLTIPGVRYVVDAGRTKERVYDLKTGISEFKVQWISKASADQRAGRAGRTGPGHCYRLYSSAVYENEFPKFSPPQLLCQPIEDVVLQMKAMGIERILNFPFPTPPESVALKSAMAMLVHLGALNM----TNDTITSLGKTLAQFPVAARFAKMLLIAKQV------------GCLEYVIAVVASLTGQSPFVLALERKEKEA-----DELEQNGETISPEEMDEDMAKEWKEAEEMRKHGQWIDEESDVLSMLRAAGAYAYS---GGSSAFCEENHLHAKVMEQMLKLRSQLTTIVNKLFASEADYTPISLRPNMPPPSPEEQDTIRQIVA----AGYLD 956          
BLAST of EWM21188.1 vs. NCBI_GenBank
Match: gi|1214692007|gb|OWZ06755.1| (ATP-dependent RNA helicase [Phytophthora megakarya])

HSP 1 Score: 318.931 bits (816), Expect = 4.108e-95
Identity = 174/378 (46.03%), Postives = 237/378 (62.70%), Query Frame = 0
Query:   43 VLPLYAMLPPKAQAAVFLPPPSPRHRRIVVATNVAETSLTLPGILYVVDCGRVKTRTFDHASGVSRYEVQWISQASADQRAGRAGRTGPGHCYRLYSSAVFSQRLSRFTAPEILNLPLEDVFLQMKALGVPLIENFPFPTPPEKKALQAAGALLGDLGAIGRREGEREGGLTSLGQGMATLPVGVRSSKMLLLGRKMLGREEGKEGEEKGGMALVVALVAGLSERDPFVFP-DGREGGGGTRGGEGEGEEGEDEAGEEDEEEVLLREKARALKLERFRQWHHPTSDALARLRAVGAYTYAHSRGGSAKFCRENMLHSPTLGRIYDLRKQLSRILNRRFEKQPSYMPLHVTPGMKPPTPAQETALRQVVSHEWMAGWKD 419
            VLPLY++LP   Q  VF  PP   HR +VVATNVAETSLT+PGI YVVD GR K R FD A+G+S +EVQWIS+ASADQRAGRAGRTGPGHCYRLYSSAV+     +F++PEIL  P++D+ LQMKA+G+  +  FPFPTPP+++A++ A A L +LGA+     E    +T LG+ +   PV  R +KMLLL +K+              +   +A+VAGLS   PF+   D RE   G    +G+G++ E E  E++  E        A ++ +  QW    SD L+ LRA GAY Y    GGS++FC++N LH  T+  +  LR+QL+RI+N+ + +Q  Y  + + P M PP    +  LRQ+V+    AG+ D
Sbjct:  569 VLPLYSLLPNDEQMKVFDTPPE-NHRLVVVATNVAETSLTIPGIKYVVDAGRTKERVFDLANGISSFEVQWISKASADQRAGRAGRTGPGHCYRLYSSAVYDTEFQKFSSPEILCQPIDDLVLQMKAMGIHNVSQFPFPTPPDRQAVKNALATLVNLGAVSPGNDE---SITGLGRSLVKFPVAARFAKMLLLAQKL------------NLVEYTIAIVAGLSGHSPFIHALDRREKEKGVDEEDGDGKKSEMEEMEKEWRE--------AEEMRKHAQWIDQESDVLSLLRAAGAYAYT---GGSSQFCKDNHLHEKTMQNMLKLRQQLTRIVNKLYAEQEGYASIELKPKMPPPDLETQVVLRQIVA----AGFLD 915          
BLAST of EWM21188.1 vs. NCBI_GenBank
Match: gi|673026042|ref|XP_008866982.1| (hypothetical protein, variant 7 [Aphanomyces invadans] >gi|673026044|ref|XP_008866983.1| hypothetical protein, variant 8 [Aphanomyces invadans] >gi|574477029|gb|ETW04026.1| hypothetical protein, variant 7 [Aphanomyces invadans] >gi|574477030|gb|ETW04027.1| hypothetical protein, variant 8 [Aphanomyces invadans])

HSP 1 Score: 309.686 bits (792), Expect = 3.649e-92
Identity = 170/386 (44.04%), Postives = 223/386 (57.77%), Query Frame = 0
Query:   41 VDVLPLYAMLPPKAQAAVFLPPPSPRHRRIVVATNVAETSLTLPGILYVVDCGRVKTRTFDHASGVSRYEVQWISQASADQRAGRAGRTGPGHCYRLYSSAVFSQRLSRFTAPEILNLPLEDVFLQMKALGVPLIENFPFPTPPEKKALQAAGALLGDLGAIGRREGEREGGLTSLGQGMATLPVGVRSSKMLLLGRKMLGREEGKEGEEKGGMALVVALVAGLSERDPFVFPDGREGGGGTRGGEGEGE----EGEDEAGEEDEEEVLLREKARALKLERFRQWHHPTSDALARLRAVGAYTYAHSRGGSAKFCRENMLHSPTLGRIYDLRKQLSRILNRRFEKQPSYMPLHVTPGMKPPTPAQETALRQVVSHEWMAGWKDDRR 422
            V VLPLY+ML    Q  VF  PP P+HR ++VATNVAETSLT+PG+ YVVD GR K R FD  SG+S+++VQWIS+ASADQRAGRAGRTGPGHCYRLYSSAVF      F+ P+IL  P+EDV LQMKA+G+  I  FPFPTPPE  AL AA   L  LGA+ R        +T LG+ +A  PV  R +KMLLL +++            G +   +A+VA LS + PF+    R+     +  +   +    +    A  E   +    E   A  ++R  QW    SD L+ LRA GAY Y+   GGS  FC EN LH   + ++  LR QL+ I+N+          L + P M PP+   +  LRQ+++  W++     RR
Sbjct:  702 VHVLPLYSMLANDDQMKVFEAPP-PKHRLVIVATNVAETSLTIPGVRYVVDAGRTKERVFDLKSGISQFQVQWISKASADQRAGRAGRTGPGHCYRLYSSAVFDNEFKTFSPPQILCQPIEDVVLQMKAMGIENILQFPFPTPPEAIALHAAVTTLLHLGALDR----TTNSITGLGKTLAGFPVAPRFAKMLLLAQQV------------GCLEYAIAVVASLSGQSPFILERERKETQKFQKEDATNDTLPTDASTAADTETRIDAWTEELQEAEAMKRHTQWIDNDSDVLSMLRAAGAYAYS---GGSTSFCAENHLHEKIMEQMLKLRGQLTTIVNKLV----GATALTLRPNMPPPSDDDQDLLRQIIAAGWLSSIAQSRR 1063          
BLAST of EWM21188.1 vs. NCBI_GenBank
Match: gi|673026040|ref|XP_008866981.1| (hypothetical protein, variant 6 [Aphanomyces invadans] >gi|574477028|gb|ETW04025.1| hypothetical protein, variant 6 [Aphanomyces invadans])

HSP 1 Score: 309.301 bits (791), Expect = 5.368e-92
Identity = 171/386 (44.30%), Postives = 223/386 (57.77%), Query Frame = 0
Query:   41 VDVLPLYAMLPPKAQAAVFLPPPSPRHRRIVVATNVAETSLTLPGILYVVDCGRVKTRTFDHASGVSRYEVQWISQASADQRAGRAGRTGPGHCYRLYSSAVFSQRLSRFTAPEILNLPLEDVFLQMKALGVPLIENFPFPTPPEKKALQAAGALLGDLGAIGRREGEREGGLTSLGQGMATLPVGVRSSKMLLLGRKMLGREEGKEGEEKGGMALVVALVAGLSERDPFVFPDGREGGGGTRGGEGEGE----EGEDEAGEEDEEEVLLREKARALKLERFRQWHHPTSDALARLRAVGAYTYAHSRGGSAKFCRENMLHSPTLGRIYDLRKQLSRILNRRFEKQPSYMPLHVTPGMKPPTPAQETALRQVVSHEWMAGWKDDRR 422
            V VLPLY+ML    Q  VF  PP P+HR ++VATNVAETSLT+PG+ YVVD GR K R FD  SG+S+++VQWIS+ASADQRAGRAGRTGPGHCYRLYSSAVF      F+ P+IL  P+EDV LQMKA+G+  I  FPFPTPPE  AL AA   L  LGA+ R        +T LG+ +A  PV  R +KMLLL +++            G +   +A+VA LS + PF+    R+     +  +   +    +    A  E   +    E   A  ++R  QW    SD L+ LRA GAY Y+   GGS  FC EN LH   + ++  LR QL+ I+N    K      L + P M PP+   +  LRQ+++  W++     RR
Sbjct:  721 VHVLPLYSMLANDDQMKVFEAPP-PKHRLVIVATNVAETSLTIPGVRYVVDAGRTKERVFDLKSGISQFQVQWISKASADQRAGRAGRTGPGHCYRLYSSAVFDNEFKTFSPPQILCQPIEDVVLQMKAMGIENILQFPFPTPPEAIALHAAVTTLLHLGALDR----TTNSITGLGKTLAGFPVAPRFAKMLLLAQQV------------GCLEYAIAVVASLSGQSPFILERERKETQKFQKEDATNDTLPTDASTAADTETRIDAWTEELQEAEAMKRHTQWIDNDSDVLSMLRAAGAYAYS---GGSTSFCAENHLHEKIMEQMLKLRGQLTTIVN----KLVGATALTLRPNMPPPSDDDQDLLRQIIAAGWLSSIAQSRR 1082          
BLAST of EWM21188.1 vs. NCBI_GenBank
Match: gi|669146424|ref|XP_008608774.1| (adenosinetriphosphatase [Saprolegnia diclina VS20] >gi|530739599|gb|EQC37841.1| adenosinetriphosphatase [Saprolegnia diclina VS20])

HSP 1 Score: 308.916 bits (790), Expect = 4.390e-91
Identity = 175/409 (42.79%), Postives = 240/409 (58.68%), Query Frame = 0
Query:   19 RRAGAEEGENREDERKQDGEGG--------VDVLPLYAMLPPKAQAAVFLPPPSPRHRRIVVATNVAETSLTLPGILYVVDCGRVKTRTFDHASGVSRYEVQWISQASADQRAGRAGRTGPGHCYRLYSSAVFSQRLSRFTAPEILNLPLEDVFLQMKALGVPLIENFPFPTPPEKKALQAAGALLGDLGAIGRREGEREGGLTSLGQGMATLPVGVRSSKMLLLGRKMLGREEGKEGEEKGGMALVVALVAGLSERDPFVFPDGREGGGGTRGGEGEGEEGEDEAGEEDEEEVLLREKARALKLERFRQWHHPTSDALARLRAVGAYTYAHSRGGSAKFCRENMLHSPTLGRIYDLRKQLSRILNRRFEKQPSYMPLHVTPGMKPPTPAQETALRQVVSHEWMAGWKD 419
            + + A + E   D + +D E G        V VLPLY+ML    Q  VF  PP P+HR IVVATNVAETSLT+PG+ YVVD GR K R FD  +G+S ++VQWIS+ASADQRAGRAGRTGPGHCYRLYSSAV+     +F+ P++L  P+EDV LQMKA+G+  I NFPFPTPPE  AL+AA   L  LGA+          +TSLG+ +A  PV  R +KMLL+ +++            G +  ++A+VA L+ + PFV    R+          E     +E  ++     + +E   A ++ +  QW    SD L  LRA GAY Y+ +      FC EN LH+  + ++  LR QL+ I+N+ F    SY P+ + P M PP+P ++  +RQ+V+    AG+ D
Sbjct:  643 KDSDASDSEEENDHQPEDDEEGSTENSTPYVHVLPLYSMLANDEQMKVFEAPP-PKHRLIVVATNVAETSLTIPGVRYVVDAGRTKERVFDLKTGISEFQVQWISKASADQRAGRAGRTGPGHCYRLYSSAVYENEFPKFSPPQLLTQPIEDVILQMKAMGIERILNFPFPTPPEAVALKAAMTTLMHLGALNM----ENDTITSLGRTLALFPVAARFAKMLLIAKQV------------GCLEYIIAVVASLTGQPPFVLAVERKDQEADADAPDEPVISPEEMSDD-----MAKEWKEAEEMRKHSQWVDEESDVLGMLRAAGAYAYSGASPA---FCDENHLHAKIMEQMLKLRSQLTLIVNKLFASDASYTPVALHPNMPPPSPEEQDTIRQIVA----AGYLD 1022          
BLAST of EWM21188.1 vs. NCBI_GenBank
Match: gi|566012507|gb|ETI35418.1| (hypothetical protein F443_18237 [Phytophthora parasitica P1569] >gi|567949935|gb|ETK75656.1| hypothetical protein L915_17762 [Phytophthora parasitica] >gi|567978599|gb|ETL29086.1| hypothetical protein L916_17663 [Phytophthora parasitica] >gi|568037988|gb|ETM35537.1| hypothetical protein L914_17575 [Phytophthora parasitica] >gi|570939980|gb|ETP05237.1| hypothetical protein F441_18112 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 308.916 bits (790), Expect = 9.214e-91
Identity = 179/399 (44.86%), Postives = 247/399 (61.90%), Query Frame = 0
Query:   24 EEGENREDERKQDGEGGV---DVLPLYAMLPPKAQAAVFLPPPSPRHRRIVVATNVAETSLTLPGILYVVDCGRVKTRTFDHASGVSRYEVQWISQASADQRAGRAGRTGPGHCYRLYSSAVFSQRLSRFTAPEILNLPLEDVFLQMKALGVPLIENFPFPTPPEKKALQAAGALLGDLGAIGRREGEREGGLTSLGQGMATLPVGVRSSKMLLLGRKMLGREEGKEGEEKGGMALVVALVAGLSERDPFVFPDGREGGGGTRGGEGEGEEGEDEAGEEDEEEVLLREKARALKLERFRQWHHPTSDALARLRAVGAYTYAHSRGGSAKFCRENMLHSPTLGRIYDLRKQLSRILNRRFEKQPSYMPLHVTPGMKPPTPAQETALRQVVSHEWMAGWKD 419
            EE +N +DE ++  +  V    VLPLY++LP   Q  VF  PP   HR +VVATNVAETSLT+PGI YVVD GR K R FD A+G+S +EVQWIS+ASADQRAGRAGRTGPGHCYRLYSSAV+     +F++PEIL  P++D+ LQMKA+G+  +  FPFPTPP+++A++ A A L +LGA+   + E    +T LG+ +   PV  R +KMLLL +K+              +   +A+VAGLS   PF+    R      R  E   EE ++E  E +E E   RE   A ++ +  QW    SD L+ LRA GAY Y    GGS++FC++N LH  T+  +  LR+QL+RI+N+ + ++ +   + + P M PP    +  LRQ+V+    AG+ D
Sbjct:  715 EEEQNSDDEDEEMEKLAVPYLHVLPLYSLLPNDEQMKVFDTPPE-NHRLVVVATNVAETSLTIPGIKYVVDAGRTKERVFDLANGISSFEVQWISKASADQRAGRAGRTGPGHCYRLYSSAVYDTEFQKFSSPEILCQPIDDLVLQMKAMGIHNVLQFPFPTPPDRQAVKNALATLVNLGAVSPGDDE---AITGLGRALVKFPVAARFAKMLLLAQKL------------NVVEYTIAIVAGLSGHSPFIHALDR------REKEKNEEENDEEKSEMEEMEKEWRE---AEEMRKHAQWIDQESDVLSLLRAAGAYAYT---GGSSQFCKDNHLHEKTMQNMLKLRQQLTRIVNKLYAEEDA---IELKPKMPPPDLETQVVLRQIVA----AGFLD 1078          
BLAST of EWM21188.1 vs. NCBI_GenBank
Match: gi|635359016|emb|CCI50679.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 305.834 bits (782), Expect = 1.741e-90
Identity = 170/422 (40.28%), Postives = 239/422 (56.64%), Query Frame = 0
Query:    3 QGEAAREGEEEGGSPGRRAGAEEGENREDERKQDGEGGV---DVLPLYAMLPPKAQAAVFLPPPSPRHRRIVVATNVAETSLTLPGILYVVDCGRVKTRTFDHASGVSRYEVQWISQASADQRAGRAGRTGPGHCYRLYSSAVFSQRLSRFTAPEILNLPLEDVFLQMKALGVPLIENFPFPTPPEKKALQAAGALLGDLGAIGRREGEREGG--LTSLGQGMATLPVGVRSSKMLLLGRKMLGREEGKEGEEKGGMALVVALVAGLSERDPFVFPDGREGGGGTRGGEGEGEEGEDEAGEEDEEEVLLREKARALKLERFRQWHHPTSDALARLRAVGAYTYAHSRGGSAKFCRENMLHSPTLGRIYDLRKQLSRILNRRFEKQPSYMPLHVTPGMKPPTPAQETALRQVVSHEWMAGWKD 419
              +A  + + E G    +  ++ G   + +R  +    V     LPLY++LP   Q  VF  PP   HR +V+AT++AETSLT+P I YVVD GR KTR ++  +G+S +++QWIS+ASADQRA RAGRTGPGHCYRLYSSAV+    S+FT PEIL  P+E++ LQMKA+G+  I  FPFPTPP++ A   A   L  LGAI  ++ E      +T LGQ +   PV  R +KMLL+ ++M            G +   +A+VAGLS   PFV              E E E+  DE         +  E  +A  L R  QW +  SD L+ LRA GAY Y    G S+ FC+EN LH   + ++  LR+QL+RI+N  + +  S+  + ++P + PP+   E  LRQ+++    AG+ D
Sbjct:  508 HDDAEEDVDIEPGEEAEQYDSDHGSQIDSDRDANDSLAVPYMHALPLYSLLPTNEQMRVFDEPPE-HHRLVVIATDIAETSLTIPNIKYVVDAGRTKTRVYNLENGISNFQIQWISKASADQRAVRAGRTGPGHCYRLYSSAVYDTDFSKFTPPEILCHPIEEIVLQMKAMGIHTISKFPFPTPPDRHAFVKAIQTLEYLGAITVQQTEDSAKEEITRLGQLLVQFPVTARFAKMLLVAKEM------------GVLEYTIAIVAGLSGHSPFV-----------TTSEEESEKHIDE---------MTAEWHKADTLRRRLQWANTQSDLLSFLRAAGAYAYG---GCSSSFCKENFLHEKIMSQMLQLRQQLTRIVNTLYAEDESFTKITLSPYLDPPSLPTEDVLRQIIA----AGFMD 889          
BLAST of EWM21188.1 vs. NCBI_GenBank
Match: gi|325183207|emb|CCA17666.1| (hypothetical protein BRAFLDRAFT_265555 [Albugo laibachii Nc14])

HSP 1 Score: 306.22 bits (783), Expect = 4.453e-90
Identity = 164/381 (43.04%), Postives = 227/381 (59.58%), Query Frame = 0
Query:   41 VDVLPLYAMLPPKAQAAVFLPPPSPRHRRIVVATNVAETSLTLPGILYVVDCGRVKTRTFDHASGVSRYEVQWISQASADQRAGRAGRTGPGHCYRLYSSAVFSQRLSRFTAPEILNLPLEDVFLQMKALGVPLIENFPFPTPPEKKALQAAGALLGDLGAIGRREG--EREGGLTSLGQGMATLPVGVRSSKMLLLGRKMLGREEGKEGEEKGGMALVVALVAGLSERDPFVFPDGREGGGGTRGGEGEGEEGEDEAGEEDEEEVLLREKARALKLERFRQWHHPTSDALARLRAVGAYTYAHSRGGSAKFCRENMLHSPTLGRIYDLRKQLSRILNRRFEKQPSYMPLHVTPGMKPPTPAQETALRQVVSHEWMAGWKD 419
            +  LPLY++LPP  Q  VF  PP   HR +VVAT++AETSLT+P I YVVD GR K+R ++  +G+S +++QWIS+ASADQRAGRAGRTGPGHCYRLYSSAV+     +FT PEIL  P+E+V LQMKA+G+  +  FPFPTPP++ A   A  LL  LGAI   +     +  +T LGQ +   PV  R +KMLLL ++M            G +   +A+VAGLS   PFV          T   E   ++  DE  E         E+ ++  L R  QW +P SD L+ LRA GAY Y      S+ FC+EN LH   + ++  LR+QL+RI+N  + ++  +  + ++  + PP+P  E  LRQ+++    AG+ D
Sbjct:  692 IHALPLYSLLPPSEQMRVFDEPPE-HHRLVVVATDIAETSLTIPNIKYVVDAGRTKSRVYNLDNGISNFQIQWISKASADQRAGRAGRTGPGHCYRLYSSAVYDTDFPKFTPPEILCHPIEEVVLQMKAMGIHNVSKFPFPTPPDRHAFVKAVQLLEYLGAITVEQSADSTKEEITRLGQLLVQFPVTARFAKMLLLAKEM------------GVLEYTIAIVAGLSGHSPFV----------TMLEEEPSDQCTDELAE---------ERRKSDMLNRRLQWANPQSDLLSLLRAAGAYAY---ESCSSSFCKENFLHEKLMSQMLQLRQQLTRIVNTLYAEEEGFTKIALSSHLDPPSPPTEDVLRQIIA----AGFMD 1033          
The following BLAST results are available for this feature:
BLAST of EWM21188.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101270|gb|EWM21188.1|0.000e+0100.00deah-box rna helicase, partial [Nannochloropsis ga... [more]
gi|1173950064|gb|OQR98048.1|1.886e-9844.70ATP-dependent RNA helicase [Achlya hypogyna][more]
gi|1173941617|gb|OQR90741.1|9.903e-9745.38ATP-dependent RNA helicase, partial [Thraustotheca... [more]
gi|1214692007|gb|OWZ06755.1|4.108e-9546.03ATP-dependent RNA helicase [Phytophthora megakarya... [more]
gi|673026042|ref|XP_008866982.1|3.649e-9244.04hypothetical protein, variant 7 [Aphanomyces invad... [more]
gi|673026040|ref|XP_008866981.1|5.368e-9244.30hypothetical protein, variant 6 [Aphanomyces invad... [more]
gi|669146424|ref|XP_008608774.1|4.390e-9142.79adenosinetriphosphatase [Saprolegnia diclina VS20]... [more]
gi|566012507|gb|ETI35418.1|9.214e-9144.86hypothetical protein F443_18237 [Phytophthora para... [more]
gi|635359016|emb|CCI50679.1|1.741e-9040.28unnamed protein product [Albugo candida][more]
gi|325183207|emb|CCA17666.1|4.453e-9043.04hypothetical protein BRAFLDRAFT_265555 [Albugo lai... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9517rna9517Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications