EWM21194.1, cds9480 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21194.1 vs. NCBI_GenBank
Match: gi|585101278|gb|EWM21194.1| (chaperone protein [Nannochloropsis gaditana]) HSP 1 Score: 678.707 bits (1750), Expect = 0.000e+0 Identity = 339/339 (100.00%), Postives = 339/339 (100.00%), Query Frame = 0
Query: 1 MAGAKDEDDEKREDWFEVMGLSWDATAEEVKDAYKKLALKYHPDKNRGDPKAADRFMLVTKAKSFLSDEGKRRRLSEKKHREAAREQRHTQRFKEMDAQRKRFKGDLEAREAKEREASRRQRPGGGGRGPGQGAGEREGGGINAHVLDELRRMGQAQREAEARRMEELLHKSNAAAEAAMARRAAEGGQGPGEAGKEGEGEGEGEGKREEREVGEGLKGAPSGVSTRTMGASTEVRVKWKRSQLEESFSDESLYQLLVRYGPIKAVEMTGVKGNTAKVVFEERSGAERAVAAYEFDAGMRLTIPADKKYRFVHTSHMYSAPALVSRKATKKHPCQHLRA 339
MAGAKDEDDEKREDWFEVMGLSWDATAEEVKDAYKKLALKYHPDKNRGDPKAADRFMLVTKAKSFLSDEGKRRRLSEKKHREAAREQRHTQRFKEMDAQRKRFKGDLEAREAKEREASRRQRPGGGGRGPGQGAGEREGGGINAHVLDELRRMGQAQREAEARRMEELLHKSNAAAEAAMARRAAEGGQGPGEAGKEGEGEGEGEGKREEREVGEGLKGAPSGVSTRTMGASTEVRVKWKRSQLEESFSDESLYQLLVRYGPIKAVEMTGVKGNTAKVVFEERSGAERAVAAYEFDAGMRLTIPADKKYRFVHTSHMYSAPALVSRKATKKHPCQHLRA
Sbjct: 1 MAGAKDEDDEKREDWFEVMGLSWDATAEEVKDAYKKLALKYHPDKNRGDPKAADRFMLVTKAKSFLSDEGKRRRLSEKKHREAAREQRHTQRFKEMDAQRKRFKGDLEAREAKEREASRRQRPGGGGRGPGQGAGEREGGGINAHVLDELRRMGQAQREAEARRMEELLHKSNAAAEAAMARRAAEGGQGPGEAGKEGEGEGEGEGKREEREVGEGLKGAPSGVSTRTMGASTEVRVKWKRSQLEESFSDESLYQLLVRYGPIKAVEMTGVKGNTAKVVFEERSGAERAVAAYEFDAGMRLTIPADKKYRFVHTSHMYSAPALVSRKATKKHPCQHLRA 339
BLAST of EWM21194.1 vs. NCBI_GenBank
Match: gi|553188524|ref|XP_005854814.1| (block of proliferation 1 [Nannochloropsis gaditana CCMP526] >gi|422294250|gb|EKU21550.1| block of proliferation 1 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 306.605 bits (784), Expect = 1.039e-90 Identity = 150/151 (99.34%), Postives = 150/151 (99.34%), Query Frame = 0
Query: 1 MAGAKDEDDEKREDWFEVMGLSWDATAEEVKDAYKKLALKYHPDKNRGDPKAADRFMLVTKAKSFLSDEGKRRRLSEKKHREAAREQRHTQRFKEMDAQRKRFKGDLEAREAKEREASRRQRPGGGGRGPGQGAGEREGGGINAHVLDELR 151
MAGAKDEDDEKREDWFEVMGLSWDATAEEVKDAYKKLALKYHPDKNRGDPKAADRFMLVTKAKSFLSDEGKRRRLSEKKHREAAREQRHTQRFKEMDAQRKRFKGDLEAREAKEREASRRQRPGGGGRGPG GAGEREGGGINAHVLDELR
Sbjct: 438 MAGAKDEDDEKREDWFEVMGLSWDATAEEVKDAYKKLALKYHPDKNRGDPKAADRFMLVTKAKSFLSDEGKRRRLSEKKHREAAREQRHTQRFKEMDAQRKRFKGDLEAREAKEREASRRQRPGGGGRGPGHGAGEREGGGINAHVLDELR 588
BLAST of EWM21194.1 vs. NCBI_GenBank
Match: gi|755950444|ref|XP_011301422.1| (PREDICTED: dnaJ homolog subfamily C member 17 [Fopius arisanus]) HSP 1 Score: 85.5001 bits (210), Expect = 3.497e-15 Identity = 82/282 (29.08%), Postives = 133/282 (47.16%), Query Frame = 0
Query: 14 DWFEVMGLSWDATAEEVKDAYKKLALKYHPDKNRGDPKAADRFMLVTKAKSFLSDEGKRRRLSEK-KHREAAREQRHTQRFKEMDAQRKRFKGDLEAREAKEREASRRQRPGGGGRGPGQGAGEREGGGINAHVLDELRRMGQAQREAEARRMEELLHKSNAAAEAAMARRAAEGGQGPGEAGKEGEGEGEGEGKREEREVGEGLKGAPSGVSTRTMGASTEVRVKWKRSQLEE----SFSDESLYQLLVRYGPIKAVEMTGVKGNTAKVVFEERSGAERAV 290
D + ++ +S +T+ ++K AY+K AL HPDKN +PKA + F +++ L+DE R + + +E A+E R +++DA+RK+FK DLEARE K R A PG G+ + E E+ R+ ++A +R +EE ++ N + + EG EG+ EG GK V+++W+ E+ +S E L +++ +YG + V ++G KG A V F+ERS AE AV
Sbjct: 8 DLYGLLEVSPSSTSSQIKTAYRKKALSCHPDKNPDNPKAGELFHQLSRVLEILTDESARSAYDKVLQSKEQAKE-----RAQKLDARRKKFKDDLEAREEKFRNAG---EPGKSGKSDEEKLKE------------EIERL----QKAGSRLVEEEVNFINEQIRQQLRKNRTEG----------REGQDEGSGK---------------------------VKIRWRVDNEEKLENGGYSREVLTRIMSKYGDVSGVVLSG-KGGRALVEFKERSAAEMAV 227
BLAST of EWM21194.1 vs. NCBI_GenBank
Match: gi|219110159|ref|XP_002176831.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411366|gb|EEC51294.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 85.1149 bits (209), Expect = 3.883e-15 Identity = 88/305 (28.85%), Postives = 140/305 (45.90%), Query Frame = 0
Query: 10 EKREDWFEVMGLSWDATAEEVKDAYKKLALKYHPDKNRG------DPKAADRFMLVTKAKSFLSDEG---KRRRLSEKKHREAAREQRHTQRFKEMDAQRKRFKGDLEAREAKEREASRRQ--RPGGGGRGPGQGAGEREGGGINAHVLDELRRMGQAQREAEARRMEELLHKSNAAAEAAMARRAAEGGQGPGEAGKEGEGEGEGEGKREEREVGEGLKGAPSGVSTRTMGASTEVRVKWKRSQLEESFSDESLYQLLVRYGPIKAVEMTGVKGNTAKVVFEERSGAERAVAAYEFDAGMRLTI 303
E +D ++V+G+ ++A+ ++ AY+KLALK+HPDK R K A F + A+++L D RR K+ +AR+ R K M +RKR + +L R+ +E +AS++ RP R + ++D+LR+ G RE R AA EAA E + +A E +R+++E E ++R+KW R +++ S S+ SL LL +YG +++VEM G KGN+A V F E + V A+ MR T
Sbjct: 8 EPEKDPYDVLGIKFNASDADITRAYRKLALKFHPDKQRSTLSSAQQEKNAQDFQDIQIARAYLLDPEHAESRRNYDSKRASISARQAADAAREKGMSERRKRMRDEL--RQGEE-QASKQPTLRPKATSRSKSEN-----------EMVDKLRKQGAEMREEYGDR---------AATEAA-----KEHARNSSQAK---------EVRRKQKESRED----------------RQLRLKWSRRKIKISPSEHSLATLLSKYGMVESVEMLGSKGNSALVTFAETASCGPVVDAFAESEEMRATF 259
BLAST of EWM21194.1 vs. NCBI_GenBank
Match: gi|156552840|ref|XP_001599974.1| (PREDICTED: dnaJ homolog subfamily C member 17 [Nasonia vitripennis] >gi|645028755|ref|XP_008212160.1| PREDICTED: dnaJ homolog subfamily C member 17 [Nasonia vitripennis]) HSP 1 Score: 83.5741 bits (205), Expect = 1.857e-14 Identity = 80/289 (27.68%), Postives = 128/289 (44.29%), Query Frame = 0
Query: 7 EDDEKREDWFEVMGLSWDATAEEVKDAYKKLALKYHPDKNRGDPKAADRFMLVTKAKSFLSDEGKRRRLSEKKHREAAREQRHTQRFKEMDAQRKRFKGDLEAREAKEREASRRQRPGGGGRGPGQGAGEREGGGINAHVLDELRRMGQAQREAEARRMEELLHKSNAAAEAAMARRAAEGGQGPGEAGKEGEGEGEGEGKREEREVGEGLKGAPSGVSTRTMGASTEVR--VKWKRSQLEES---FSDESLYQLLVRYGPIKAVEMTGVKGNTAKVVFEERSGAERAV 290
+DD + D +E++G + + E+K AY+K AL HPDKN +PKAA+ F+ ++KA L+D R + + AR Q R KE+DA+RK+FK DLEARE EA +R + G P + + + +AE R++ KEG E E +R +++ E L+ ST + E R ++WK + + + ++L++ L +YG I + ++ K V F+ R AE AV
Sbjct: 2 DDDISKLDLYEIIGATITSDESEIKKAYRKKALSCHPDKNPDNPKAAELFLQLSKALEILTDAAARAAYDKVVN---ARAQAKL-RVKELDAKRKKFKDDLEARE----EAFKRSQTSGYTYSP---------------------KSDEEKLKAEIERLK-----------------------------KEGSKLVEEEKERLRQKILEDLRNG----STNNGYSEDECRCKIRWKVDADDTTNGGYDYDNLHRFLSKYGEISVLVISTTKKGRGLVEFKTREAAESAV 228
BLAST of EWM21194.1 vs. NCBI_GenBank
Match: gi|817200404|ref|XP_012275913.1| (PREDICTED: dnaJ homolog subfamily C member 17 [Orussus abietinus]) HSP 1 Score: 81.2629 bits (199), Expect = 8.722e-14 Identity = 81/285 (28.42%), Postives = 128/285 (44.91%), Query Frame = 0
Query: 8 DDEKREDWFEVMGLSWDATAEEVKDAYKKLALKYHPDKNRGDPKAADRFMLVTKAKSFLSDEGKRRRLSEKKHREAAREQRHTQRFKEMDAQRKRFKGDLEAREAKEREASRRQRPGGGGRGPGQGAGEREGGGINAHVLDELRRMGQAQREAEARRMEELLHKSNAAAEAAMARRAAEGGQGPGEAGKEGEGEGEGEGKREEREVGEGLKGAPSGVSTRTMGASTEVRVKWKRSQLEES---FSDESLYQLLVRYGPIKAVEMTGVKGNTAKVVFEERSGAERA 289
DD D ++++G S A+ +E+K AY+K AL HPDKN +PKA + F +++A L DE R + H AR Q R +E+D++R++FK DLEARE EA R + GGG G DE R +AE R++ KEG + E E +++ E L G T +++KWK ++ + ++ + L+++L +YG I A+ ++ K A V ++E + AE A
Sbjct: 2 DDLMNLDLYQLIGASPTASVKEIKTAYRKKALTCHPDKNPDNPKAGELFHELSRALEILIDESARAAYDKVLH---ARCQAKL-RVRELDSKRRKFKEDLEARE----EAYRLSQQGGGYSGKS----------------DEDR------LKAEIERLQ-----------------------------KEGSKQVEEEVAFVRQKIFEQLHGHNKSAPT-----DCRIKLKWKVAKDDSENGGYNYDVLHRMLSKYGDIGALVISSNKNGRALVEYKEATAAEMA 222
BLAST of EWM21194.1 vs. NCBI_GenBank
Match: gi|299469751|emb|CBN76605.1| (Heat shock protein 40 like protein/ DnaJ domain containing protein [Ectocarpus siliculosus]) HSP 1 Score: 80.4925 bits (197), Expect = 4.770e-13 Identity = 88/275 (32.00%), Postives = 135/275 (49.09%), Query Frame = 0
Query: 9 DEKREDWFEVMGLSWDATAEEVKDAYKKLALKYHPDKNRGDPKAADRFMLVTKAKSFLSDEGKRRRLSEKKHREAAR---EQRHTQRFKEMDAQRKRFKGDLEAREAKEREASRRQRPGGGGRGPGQGAGEREGGGINAHVLDELRRMGQAQREAEARRMEELLHKSNAAAEAAMARRAAEGGQGPGEAGKEGEGEGEGEGKREEREVGEGLKGAPSGVSTRTMGASTEVRVKWKRSQLEESFSDESLYQLLVRYGPIKAVEMTGVKGNTAKVVF 280
+E+ DW+ V+GL A ++V A+KK++L +HPDKN G +A +FM + +AK FL D GK+R L ++K AAR E +R + M +++ + +LE RE + S P G G G R + A LDELR+ G+A+R+ R+ + KS A+ +R+A G +G G G + EER +RVKWK + ES SD +L L ++G +++V + KG+ A VVF
Sbjct: 8 EEEATDWYVVLGLDVGAREKDVNKAFKKMSLVWHPDKNGGSEEAHAKFMKIKEAKLFLLD-GKKRGLYDQKR--AARRKTEALLAERNRTMGKRQRELRVELERREKEAASGSSFSSPSSRAGGLGAGGEAR----VAAARLDELRKKGEAERQ---RQSADWSVKSANIKSASARKRSAPSS---GLSGANGSGGDGDDDGLEER----------------------TLRVKWKTKK--ESHSDYTLDVLFSKFGVVQSVSIEEGKGDRAMVVF 245
BLAST of EWM21194.1 vs. NCBI_GenBank
Match: gi|1088273326|gb|OHB28735.1| (integrase [Desulfuromonadaceae bacterium GWC2_58_13]) HSP 1 Score: 77.7962 bits (190), Expect = 1.040e-12 Identity = 40/79 (50.63%), Postives = 56/79 (70.89%), Query Frame = 0
Query: 13 EDWFEVMGLSWDATAEEVKDAYKKLALKYHPDKNRGDPKAADRFMLVTKAKSFLSDEGKRRRLSEKKHREAAREQRHTQ 91
+D++ V+G+ DATA+E+K AY+KLALKYHPDKN GD KA D+F +T+A + LSD K+R+ + EA QR +Q
Sbjct: 3 KDYYAVLGVKKDATADEIKKAYRKLALKYHPDKNPGDKKAEDKFKELTEAYAVLSDPEKKRQYDQ--FGEAGFHQRFSQ 79
BLAST of EWM21194.1 vs. NCBI_GenBank
Match: gi|749569579|ref|WP_040199247.1| (J domain-containing protein [Geoalkalibacter subterraneus] >gi|749207656|gb|AJF05850.1| integrase [Geoalkalibacter subterraneus]) HSP 1 Score: 77.7962 bits (190), Expect = 1.332e-12 Identity = 49/118 (41.53%), Postives = 65/118 (55.08%), Query Frame = 0
Query: 13 EDWFEVMGLSWDATAEEVKDAYKKLALKYHPDKNRGDPKAADRFMLVTKAKSFLSDEGKRRRLSEKKHREAAREQRHTQRFKEMDAQRKRFKGDLEAREAKEREASRRQRPGGGGRGP 130
+D++ V+GLS DA+ +++K AY+KLALKYHPDKN GD KA DRF +T+A + LSD K KK + E QR+ + D R GD+ E GGGG P
Sbjct: 3 KDYYGVLGLSKDASTDQIKKAYRKLALKYHPDKNPGDKKAEDRFKEITEAYAVLSDPEK------KKQYDQFGESDFHQRYSKEDIFRGFDVGDIFREFGFGTEDIFSHLFGGGGAHP 114
BLAST of EWM21194.1 vs. NCBI_GenBank
Match: gi|646710739|gb|KDR16157.1| (DnaJ-like protein subfamily C member 17 [Zootermopsis nevadensis]) HSP 1 Score: 77.411 bits (189), Expect = 2.135e-12 Identity = 48/113 (42.48%), Postives = 70/113 (61.95%), Query Frame = 0
Query: 14 DWFEVMGLSWDATAEEVKDAYKKLALKYHPDKNRGDPKAADRFMLVTKAKSFLSDEGKR----RRLSEKKHREAAREQRHTQRFKEMDAQRKRFKGDLEAREAKEREASRRQR 122
D +E++G+ AT +EVK AY+K AL HPDKN +PKAA+ F ++KA L+DE R R L+ KK A + RH +E+D++R++ K LEARE + E S++ R
Sbjct: 10 DLYELIGILSTATTQEVKKAYRKKALSCHPDKNPDNPKAAELFHQLSKALEILTDESARAAYDRVLNAKK----AAKLRH----RELDSKRQKLKEQLEARERQAEEFSKQNR 114 The following BLAST results are available for this feature:
BLAST of EWM21194.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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