EWM21222.1, cds9452 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM21222.1 vs. NCBI_GenBank
Match: gi|585101332|gb|EWM21222.1| (hypothetical protein Naga_100521g3 [Nannochloropsis gaditana]) HSP 1 Score: 692.575 bits (1786), Expect = 0.000e+0 Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 0
Query: 1 MLPTAWRSCRTQRQGQGRMRLKFPLLQLLLLGAPGLSSLVLGIDKHPINPLTSSLFISSTVHNGRSTARDLRLFSTATRSSLSVASIKLKVCQLAALTDRGKLQDPLVSDEGLYAAERETMVSLLELLIAKGRERKQAMSPVLLEGEWELVYSTKQLFRSSPFFQAIERAYADPTKSELFFKLHELQTCSWGASQIGRVAQTIDLQAQTLLSSFDTVLFPLTTIPLIGWFKLLPTFGGRVDSLADGLTVSESSQGTALRLEYAVAKTSFKRLAGLKTMPLLGAWLENKQFPTKEAWNLLPWNWSGPGPRCLVEVVYLDEDFRIVREGGGEDGGRSGATLFTRGR 344
MLPTAWRSCRTQRQGQGRMRLKFPLLQLLLLGAPGLSSLVLGIDKHPINPLTSSLFISSTVHNGRSTARDLRLFSTATRSSLSVASIKLKVCQLAALTDRGKLQDPLVSDEGLYAAERETMVSLLELLIAKGRERKQAMSPVLLEGEWELVYSTKQLFRSSPFFQAIERAYADPTKSELFFKLHELQTCSWGASQIGRVAQTIDLQAQTLLSSFDTVLFPLTTIPLIGWFKLLPTFGGRVDSLADGLTVSESSQGTALRLEYAVAKTSFKRLAGLKTMPLLGAWLENKQFPTKEAWNLLPWNWSGPGPRCLVEVVYLDEDFRIVREGGGEDGGRSGATLFTRGR
Sbjct: 1 MLPTAWRSCRTQRQGQGRMRLKFPLLQLLLLGAPGLSSLVLGIDKHPINPLTSSLFISSTVHNGRSTARDLRLFSTATRSSLSVASIKLKVCQLAALTDRGKLQDPLVSDEGLYAAERETMVSLLELLIAKGRERKQAMSPVLLEGEWELVYSTKQLFRSSPFFQAIERAYADPTKSELFFKLHELQTCSWGASQIGRVAQTIDLQAQTLLSSFDTVLFPLTTIPLIGWFKLLPTFGGRVDSLADGLTVSESSQGTALRLEYAVAKTSFKRLAGLKTMPLLGAWLENKQFPTKEAWNLLPWNWSGPGPRCLVEVVYLDEDFRIVREGGGEDGGRSGATLFTRGR 344
BLAST of EWM21222.1 vs. NCBI_GenBank
Match: gi|553195712|ref|XP_005856189.1| (hypothetical protein NGA_0320000 [Nannochloropsis gaditana CCMP526] >gi|422292867|gb|EKU20169.1| hypothetical protein NGA_0320000 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 441.425 bits (1134), Expect = 3.110e-153 Identity = 239/305 (78.36%), Postives = 243/305 (79.67%), Query Frame = 0
Query: 19 MRLKFPLLQLLLLGAPGLSSLVLGIDKHPINPLTSSLFISSTVHNGRSTARDLRLFSTATRSSLSVASIKLKVCQLAALTDRGKLQDPLVSDEGLYAAERETMVSLLELLIAKGRERKQAMSPVLLEGEWELVYSTKQLFRSSPFFQAIERAYADPTKSELFFKLHELQTCSWGASQIGRVAQTIDLQAQTLLSSFDTVLFPLTTIPLIG-----------------WF-------------KLLPTFGGRVDS----------------------LADGLTVSESSQGTALRLEYAVAKTSFKR 271
MRLKFPLLQLLLLGAPGLSSLVLGIDKHPINPLTSSLFISSTVHNGRSTARDLRLFSTATRSSLSVASIKLKVCQLAALTDRGKLQDPLVSDEGLYAAERETMVSLLELLIAKGRERKQAMSPVLLEGEWELVYSTKQLFRSSPFFQAIERAYADPTKSELFFKLHELQTCSWGASQIGRVAQTIDLQAQTLLSSFDTVLFPLTTIPLIG +F LP+ + S + LTVSESSQGTALRLEYAVAKTSFKR
Sbjct: 1 MRLKFPLLQLLLLGAPGLSSLVLGIDKHPINPLTSSLFISSTVHNGRSTARDLRLFSTATRSSLSVASIKLKVCQLAALTDRGKLQDPLVSDEGLYAAERETMVSLLELLIAKGRERKQAMSPVLLEGEWELVYSTKQLFRSSPFFQAIERAYADPTKSELFFKLHELQTCSWGASQIGRVAQTIDLQAQTLLSSFDTVLFPLTTIPLIGKPPAPRLLRLLARPMPPFFPPFLPPSPQAGSSSFLPSEAASIPSPTVPCALPSHPSRHHPPNPSCPVPSQLTVSESSQGTALRLEYAVAKTSFKR 305
BLAST of EWM21222.1 vs. NCBI_GenBank
Match: gi|500144414|ref|WP_011820417.1| (pilus assembly protein [Prochlorococcus marinus] >gi|123200709|gb|ABM72317.1| possible Gram-negative pili assembly chaperone [Prochlorococcus marinus str. MIT 9515]) HSP 1 Score: 216.468 bits (550), Expect = 1.618e-65 Identity = 111/243 (45.68%), Postives = 159/243 (65.43%), Query Frame = 0
Query: 87 IKLKVCQLAALTDRGKLQDPLVSDEGLYAAERETMVSLLELLIAKGRERKQAMSPVLLEGEWELVYSTKQLFRSSPFFQAIERAYADPTKSELFFKLHELQTCSWGASQIGRVAQTIDLQAQTLLSSFDTVLFPLTTIPLIGWFKLLPTFGGRVDSLADGLTVSESSQGTALRLEYAVAKTSFKRLAGLKTMPLLGAWLENKQFPTKEAWNLLPWNWSGPGPRCLVEVVYLDEDFRIVREGGG 329
+K K+ Q+AA+TDRG+ + L+S +Y + E M +L+++L E +S L GEWEL+YST +LFRSSPFF AIE+A D KS LFFKLH+LQ S+G S IGR+AQ ID + +S+FDT++F L+TIP++GWFKLLPTFGGRV +LAD L + ++S L+ + KT ++ GL +P+ L ++ +P K W+ LPWN P C V ++YLDE+ RI+++ G
Sbjct: 7 VKKKIYQIAAITDRGQRLNKLIS--PIYQEKLEEMEALIKILECLNFE----ISEEKLSGEWELIYSTVELFRSSPFFLAIEKALNDEFKSNLFFKLHQLQVGSFGLSTIGRIAQNIDFNKKEFISTFDTIIFGLSTIPILGWFKLLPTFGGRVITLADDLNLKDNS------LQMNLQKTKVSKVEGLNKIPIFSTLLMDRWYPVKGVWDKLPWN--KESPSCEVSIIYLDEEMRIMKDIYG 235
BLAST of EWM21222.1 vs. NCBI_GenBank
Match: gi|499445190|ref|WP_011132654.1| (pilus assembly protein [Prochlorococcus marinus] >gi|33634154|emb|CAE19480.1| possible Gram-negative pili assembly chaperone [Prochlorococcus marinus subsp. pastoris str. CCMP1986] >gi|691664470|gb|KGF88827.1| putative Gram-negative pili assembly chaperone [Prochlorococcus marinus str. EQPAC1]) HSP 1 Score: 213.772 bits (543), Expect = 2.143e-64 Identity = 112/247 (45.34%), Postives = 156/247 (63.16%), Query Frame = 0
Query: 83 SVASIKLKVCQLAALTDRGKLQDPLVSDEGLYAAERETMVSLLELLIAKGRERKQAMSPVLLEGEWELVYSTKQLFRSSPFFQAIERAYADPTKSELFFKLHELQTCSWGASQIGRVAQTIDLQAQTLLSSFDTVLFPLTTIPLIGWFKLLPTFGGRVDSLADGLTVSESSQGTALRLEYAVAKTSFKRLAGLKTMPLLGAWLENKQFPTKEAWNLLPWNWSGPGPRCLVEVVYLDEDFRIVREGGG 329
+ IK K+ Q+AA+TDRG+ + L++ +Y + + M +L+++L + E +S L GEWEL+YST +LFRSSPFF AIE+A D KS LFFKLH+LQ S+G S IGR+AQ ID + LS+FDT +F LT IP++GWFKLLPTFGGRV +LAD L + + L+ + KT ++ GL +PL L + +P KE W LPWN P C V V+YLDE+ R++++ G
Sbjct: 3 DIEEIKKKIYQIAAITDRGQRLNKLIA--PMYQEKLKEMGNLIDILESFNTE----VSEEKLSGEWELIYSTVELFRSSPFFLAIEKALNDEFKSNLFFKLHQLQVGSFGLSTIGRIAQNIDFDKKEFLSTFDTTIFGLTIIPILGWFKLLPTFGGRVITLADDLILEDKV------LKMNLKKTKVSKVDGLNKIPLFSTLLMERWYPVKEVWEKLPWN--KESPSCEVSVIYLDEEVRVMKDIYG 235
BLAST of EWM21222.1 vs. NCBI_GenBank
Match: gi|1129535818|ref|WP_075487226.1| (pilus assembly protein [Prochlorococcus marinus]) HSP 1 Score: 213.386 bits (542), Expect = 2.820e-64 Identity = 111/246 (45.12%), Postives = 154/246 (62.60%), Query Frame = 0
Query: 84 VASIKLKVCQLAALTDRGKLQDPLVSDEGLYAAERETMVSLLELLIAKGRERKQAMSPVLLEGEWELVYSTKQLFRSSPFFQAIERAYADPTKSELFFKLHELQTCSWGASQIGRVAQTIDLQAQTLLSSFDTVLFPLTTIPLIGWFKLLPTFGGRVDSLADGLTVSESSQGTALRLEYAVAKTSFKRLAGLKTMPLLGAWLENKQFPTKEAWNLLPWNWSGPGPRCLVEVVYLDEDFRIVREGGG 329
+ IK + ++AA+TDRG+ + L+S +Y + M L++ L ++ +S LL GEWEL++S +LFRSSPFF AIE+A D KS LFFKLH+LQ S+G S IGR+AQ ID + +S+FDT +F LTTIP++GWFKLLPTFGGRV +LA L + + L+ + KT ++ GL +PL L ++ +P KE WN LPWN P C V +VYLDED RI+++ G
Sbjct: 4 IGEIKSNIFKIAAVTDRGQRLNKLIS--PMYEEKINEMDELIDAL----KDLSFEISEKLLSGEWELIFSNVELFRSSPFFLAIEKALNDEFKSNLFFKLHQLQVGSFGISTIGRIAQKIDFDKKEFISTFDTTIFGLTTIPILGWFKLLPTFGGRVITLASDLVLRNN------LLDMNLQKTKVSKVNGLNKIPLFSELLMDRWYPVKEVWNKLPWN--KESPNCQVSIVYLDEDMRIMQDMYG 235
BLAST of EWM21222.1 vs. NCBI_GenBank
Match: gi|499695847|ref|WP_011376581.1| (pilus assembly protein [Prochlorococcus marinus] >gi|78712913|gb|ABB50090.1| gram-negative pili assembly chaperone-like protein [Prochlorococcus marinus str. MIT 9312] >gi|691677954|gb|KGG01934.1| putative Gram-negative pili assembly chaperone [Prochlorococcus marinus str. MIT 9311]) HSP 1 Score: 213.386 bits (542), Expect = 3.616e-64 Identity = 110/246 (44.72%), Postives = 153/246 (62.20%), Query Frame = 0
Query: 84 VASIKLKVCQLAALTDRGKLQDPLVSDEGLYAAERETMVSLLELLIAKGRERKQAMSPVLLEGEWELVYSTKQLFRSSPFFQAIERAYADPTKSELFFKLHELQTCSWGASQIGRVAQTIDLQAQTLLSSFDTVLFPLTTIPLIGWFKLLPTFGGRVDSLADGLTVSESSQGTALRLEYAVAKTSFKRLAGLKTMPLLGAWLENKQFPTKEAWNLLPWNWSGPGPRCLVEVVYLDEDFRIVREGGG 329
+A IK + ++AA+TDRG+ + L+S +Y + MV L++ L + +S L GEWEL++S +LFRSSPFF AIE A D KS LFFKLH+LQ S+G S IGR+AQ ID + +S+FDT +F LTTIP++GWFKLLPTFGGRV +LA L + +S L+ + KT ++ GL +P L ++ +P K+ WN LPWN P C V +VYLDE+ RI+++ G
Sbjct: 4 IAEIKSNIYKIAAVTDRGQRLNKLIS--PMYEEKNNEMVELIDDL----KNLSFEISEKSLSGEWELIFSNVELFRSSPFFLAIENALNDEFKSNLFFKLHQLQVGSFGISTIGRIAQKIDFDNKEFISTFDTTIFGLTTIPILGWFKLLPTFGGRVITLASDLVLKNNS------LDMNLQKTKVSKVDGLNKIPFFSELLMDRWYPVKDVWNKLPWN--KESPNCHVSIVYLDEEMRIMQDMYG 235
BLAST of EWM21222.1 vs. NCBI_GenBank
Match: gi|1159787133|ref|WP_079331334.1| (pilus assembly protein [Prochlorococcus sp. HOT208_60m_813I02]) HSP 1 Score: 212.616 bits (540), Expect = 5.394e-64 Identity = 109/246 (44.31%), Postives = 154/246 (62.60%), Query Frame = 0
Query: 84 VASIKLKVCQLAALTDRGKLQDPLVSDEGLYAAERETMVSLLELLIAKGRERKQAMSPVLLEGEWELVYSTKQLFRSSPFFQAIERAYADPTKSELFFKLHELQTCSWGASQIGRVAQTIDLQAQTLLSSFDTVLFPLTTIPLIGWFKLLPTFGGRVDSLADGLTVSESSQGTALRLEYAVAKTSFKRLAGLKTMPLLGAWLENKQFPTKEAWNLLPWNWSGPGPRCLVEVVYLDEDFRIVREGGG 329
+ IKL + ++AA+TDRG+ + +S +Y + M L++ L ++ +S LL GEWEL++S +LFRSSPFF AIE+A D KS LFFKLH+LQ S+G S IGR+AQ ID + +S+FDT +F LTTIP++GWFKLLPTFGGRV +LA L + + L+ + KT ++ GL +PL L ++ +P KE WN LPWN P C V +VYLD++ RI+++ G
Sbjct: 4 IGEIKLNIYKIAAVTDRGQRLNKFIS--PMYEEKANEMDELIDAL----KDFSFEISEKLLSGEWELIFSNVELFRSSPFFLAIEKALNDEFKSNLFFKLHQLQVGSFGISTIGRIAQKIDFDKKEFISTFDTTIFGLTTIPILGWFKLLPTFGGRVITLASNLVLRNN------LLDMNLQKTKVSKVDGLNKIPLFSELLMDRWYPVKEVWNKLPWN--KESPNCQVSIVYLDDEMRIMQDMYG 235
BLAST of EWM21222.1 vs. NCBI_GenBank
Match: gi|500142550|ref|WP_011818553.1| (pilus assembly protein [Prochlorococcus marinus] >gi|123198762|gb|ABM70403.1| possible Gram-negative pili assembly chaperone [Prochlorococcus marinus str. AS9601]) HSP 1 Score: 212.616 bits (540), Expect = 5.512e-64 Identity = 110/246 (44.72%), Postives = 155/246 (63.01%), Query Frame = 0
Query: 84 VASIKLKVCQLAALTDRGKLQDPLVSDEGLYAAERETMVSLLELLIAKGRERKQAMSPVLLEGEWELVYSTKQLFRSSPFFQAIERAYADPTKSELFFKLHELQTCSWGASQIGRVAQTIDLQAQTLLSSFDTVLFPLTTIPLIGWFKLLPTFGGRVDSLADGLTVSESSQGTALRLEYAVAKTSFKRLAGLKTMPLLGAWLENKQFPTKEAWNLLPWNWSGPGPRCLVEVVYLDEDFRIVREGGG 329
+ IK + ++AA+TDRG+ + L+S +Y + M L++ L ++ +S LL GEWEL++S +LFRSSPFF AIE+A D KS LFFKLH+LQ S+G S IGR+AQ ID + + +S+FDT +F LTTIP++GWFKLLPTFGGRV +LA L + + L+ + KT ++ GL +PL L ++ +P KE WN LPWN P C V +VYLD++ RIV++ G
Sbjct: 4 IGEIKSNIYKIAAVTDRGQRLNKLIS--PMYEEKANEMDELIDAL----KDFSFEISEKLLSGEWELIFSNVELFRSSPFFLAIEKALNDEFKSNLFFKLHQLQVGSFGISTIGRIAQKIDFEKKEFISTFDTTIFGLTTIPILGWFKLLPTFGGRVITLASDLVLRNNF------LDMKLQKTKVSKVDGLNKIPLFSELLMDRWYPVKEVWNKLPWN--KESPNCQVSIVYLDDEMRIVQDMYG 235
BLAST of EWM21222.1 vs. NCBI_GenBank
Match: gi|695320423|ref|WP_032519030.1| (pilus assembly protein [Prochlorococcus marinus] >gi|691686021|gb|KGG09823.1| putative Gram-negative pili assembly chaperone [Prochlorococcus marinus str. SB]) HSP 1 Score: 212.616 bits (540), Expect = 6.208e-64 Identity = 110/246 (44.72%), Postives = 154/246 (62.60%), Query Frame = 0
Query: 84 VASIKLKVCQLAALTDRGKLQDPLVSDEGLYAAERETMVSLLELLIAKGRERKQAMSPVLLEGEWELVYSTKQLFRSSPFFQAIERAYADPTKSELFFKLHELQTCSWGASQIGRVAQTIDLQAQTLLSSFDTVLFPLTTIPLIGWFKLLPTFGGRVDSLADGLTVSESSQGTALRLEYAVAKTSFKRLAGLKTMPLLGAWLENKQFPTKEAWNLLPWNWSGPGPRCLVEVVYLDEDFRIVREGGG 329
+ IK + ++AA+TDRG+ + L+S +Y + M L++ L + +S LL GEWEL++S +LFRSSPFF AIE+A D KS LFFKLH+LQ S+G S IGR+AQ ID + + +S+FDT +F LTTIP++GWFKLLPTFGGRV +LA L + + L+ + KT ++ GL +PL L N+ +P KE WN LPWN P C V +VYLD++ RI+++ G
Sbjct: 4 IREIKSNIYKIAAVTDRGQRLNKLIS--PMYEEKANEMDELIDAL----KNFSFEISEKLLSGEWELIFSNVELFRSSPFFLAIEKALNDEFKSNLFFKLHQLQVGSFGISTIGRIAQKIDFEKKEFISTFDTTIFGLTTIPILGWFKLLPTFGGRVITLASDLVLRNN------LLDMNLQKTKVSKVDGLNKIPLFSELLMNRWYPVKEVWNKLPWN--KDSPNCQVSIVYLDDEMRIMQDMYG 235
BLAST of EWM21222.1 vs. NCBI_GenBank
Match: gi|757603048|ref|WP_042850492.1| (hypothetical protein [Prochlorococcus sp. MIT 0604] >gi|689268106|gb|AIQ95167.1| putative Gram-negative pili assembly chaperone [Prochlorococcus sp. MIT 0604]) HSP 1 Score: 212.616 bits (540), Expect = 7.222e-64 Identity = 110/246 (44.72%), Postives = 155/246 (63.01%), Query Frame = 0
Query: 84 VASIKLKVCQLAALTDRGKLQDPLVSDEGLYAAERETMVSLLELLIAKGRERKQAMSPVLLEGEWELVYSTKQLFRSSPFFQAIERAYADPTKSELFFKLHELQTCSWGASQIGRVAQTIDLQAQTLLSSFDTVLFPLTTIPLIGWFKLLPTFGGRVDSLADGLTVSESSQGTALRLEYAVAKTSFKRLAGLKTMPLLGAWLENKQFPTKEAWNLLPWNWSGPGPRCLVEVVYLDEDFRIVREGGG 329
+ IK + ++AA+TDRG+ + L+S +Y + M L++ L ++ MS LL GEWEL++S +LFRSSPFF AIE+A D KS LFFKLH+LQ S+G S IGR+AQ ID + + +S+FDT +F LTTIP++GWFKLLPTFGGRV +LA L + + L+ + KT ++ GL +PL L ++ +P KE WN LPWN P C V +VYLD++ RI+++ G
Sbjct: 4 IGEIKSNIYKIAAVTDRGQRLNKLIS--PMYEEKANEMDKLIDAL----KDFSFEMSEELLSGEWELIFSNVELFRSSPFFLAIEKALNDEFKSNLFFKLHQLQVGSFGISTIGRIAQKIDFKKKEFISTFDTTIFGLTTIPILGWFKLLPTFGGRVITLASDLVLRNN------LLDMNLQKTKVSKVDGLNKIPLFSELLMDRWYPVKEVWNKLPWN--KESPNCQVSIVYLDDEMRIMQDMYG 235 The following BLAST results are available for this feature:
BLAST of EWM21222.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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