EWM29768.1, cds945 (CDS) Nannochloropsis gaditana

Overview
NameEWM29768.1
Unique Namecds945
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:797164..797425 -
Alignment locationCM002456.1:796707..796893 -
Alignment locationCM002456.1:793333..796606 -
Alignment locationCM002456.1:792992..793234 -
Alignment locationCM002456.1:792400..792864 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29768.1
Productnuclear receptor corepressor 1-like protein
Orig transcript idgnl|cribi|Naga_100022g61.867.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:797164..797425 -
CM002456.1supercontigCM002456.1:796707..796893 -
CM002456.1supercontigCM002456.1:793333..796606 -
CM002456.1supercontigCM002456.1:792992..793234 -
CM002456.1supercontigCM002456.1:792400..792864 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR017884SANT_dom
IPR009057Homeodomain-like
IPR001005SANT/Myb
Homology
BLAST of EWM29768.1 vs. NCBI_GenBank
Match: gi|585112348|gb|EWM29768.1| (nuclear receptor corepressor 1-like protein [Nannochloropsis gaditana])

HSP 1 Score: 3068.1 bits (7953), Expect = 0.000e+0
Identity = 1476/1476 (100.00%), Postives = 1476/1476 (100.00%), Query Frame = 0
Query:    1 MNQGNNCGGSGHERERNRGEKSVAFRGNVWPSSQKDYRSLLSESDREDRKPGNGSSVGGRSRRNVSYRRDAFDDDRELRTSGFIDFKGRERDMGLHRGRSRSDSERASWPTAPLMSSNPGGPLDNVRNRLLSASASLPSDSLQATRRCTMGDDDTSRNSRGRKEDDATSLAAAGTDRLLKLNMDRRKTGRREMEEVRHSTAARGKHKHFSWEEGPLEASHASRRPSLTQETGRSSVISSTRTLSAASIIHGKSCLYESSHNADKGHNQYLPRSDEQGVPEVFCQSLLCRPLDGGYGPRRAPWRYSDLSITEARQRRVAFELGEVQGAGVEAFAFGHDTFLTNGQVGGVEGPDFVEEYPLSRCHSTYSLDNSDILEGHGSMQAPCLPTPTKTGVGGVSRLLSVRQGTAHVSSREPRMERTHSESSGSASSGRLRLGWGQGLARRATAFEQKSPRDDAAILPKKYGARGNADFAADKPNNVELSSKVLNSDLCALKDPGLGVSKATSLQNDPSQQQFLPIADGIGLPSTSFTQSRKGREQQEKRLLQNKGAKKFFQTRRLRQMAVAYVRHVWRKNALKPAARVSLFTISSSSVGGVSAPGGVVSGKNENVPFVPSIDKKVVQEELLKTDAASSSNKQRKGSPCRFLEQEGGNVEVKRQKSACMTETSLTSATKHAEREAAQAKLQKYRALSAAAGYPLCGLLPKESMARALKVTACVRAFRPHADKNMQTVLKAEAEMVPLPCREDILSALEFVNADVERLQAEVTVVEDSILHGAAGSAAYRAPWWNRAYADVLRLRREASRKIKMLAWKVKKEQLLLEVSSEGARDKVYDSIQASNATDENANENRDIRCGALGALAKRQISREAIQSIVQSRVIQIHRYVEQLTDQYTQIDEAWKQSHPPRPDESRDAHFASDMRTTRTLAALQRTSFPGANASDRPTRMGAFTLRGGDFAGSEYDVSLITREIEKKEKMKIRIEQGGAEIPTMLSLSGRFGTHEFSDTSSGPLTSDGGPMRCASRTLTEKCTADCNCPRAVERRSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDVIEFYYDSKQCIHYKALLKENEARRRGADQNLVWLKHAARQVGATIDLRCDNDGHEVLRLYPPGNDYLYTTFNKHPGSRPFHQTSLLQQSGEYVKHQAVARRQVCATSQSIEQTTSYAPLPSFAFPERHSAQLYGGNGNNGVVVDRSSVPNDAALNMLPTLHHVEESRSSVVFQERDETHFVTPADFSPRQHDDEDVEGKRVMTKWTEEEKHYAIQLLETYGKQWALISGMMEGSKKPEQIKNFFSNYKKKYRLDERLPPSLPVQRRKEYSATRRVKSPQPRDLATTSSRGTALLQDANLAHGQPAHEYKETCTPFLLDTLAQDPNSRAVIFSSTMASSANEDDKKKVEAEQRLEGSGYVASKAPDVQSQPQGARGSKPSGDGEKELQSPERLHYGNLLI 1476
            MNQGNNCGGSGHERERNRGEKSVAFRGNVWPSSQKDYRSLLSESDREDRKPGNGSSVGGRSRRNVSYRRDAFDDDRELRTSGFIDFKGRERDMGLHRGRSRSDSERASWPTAPLMSSNPGGPLDNVRNRLLSASASLPSDSLQATRRCTMGDDDTSRNSRGRKEDDATSLAAAGTDRLLKLNMDRRKTGRREMEEVRHSTAARGKHKHFSWEEGPLEASHASRRPSLTQETGRSSVISSTRTLSAASIIHGKSCLYESSHNADKGHNQYLPRSDEQGVPEVFCQSLLCRPLDGGYGPRRAPWRYSDLSITEARQRRVAFELGEVQGAGVEAFAFGHDTFLTNGQVGGVEGPDFVEEYPLSRCHSTYSLDNSDILEGHGSMQAPCLPTPTKTGVGGVSRLLSVRQGTAHVSSREPRMERTHSESSGSASSGRLRLGWGQGLARRATAFEQKSPRDDAAILPKKYGARGNADFAADKPNNVELSSKVLNSDLCALKDPGLGVSKATSLQNDPSQQQFLPIADGIGLPSTSFTQSRKGREQQEKRLLQNKGAKKFFQTRRLRQMAVAYVRHVWRKNALKPAARVSLFTISSSSVGGVSAPGGVVSGKNENVPFVPSIDKKVVQEELLKTDAASSSNKQRKGSPCRFLEQEGGNVEVKRQKSACMTETSLTSATKHAEREAAQAKLQKYRALSAAAGYPLCGLLPKESMARALKVTACVRAFRPHADKNMQTVLKAEAEMVPLPCREDILSALEFVNADVERLQAEVTVVEDSILHGAAGSAAYRAPWWNRAYADVLRLRREASRKIKMLAWKVKKEQLLLEVSSEGARDKVYDSIQASNATDENANENRDIRCGALGALAKRQISREAIQSIVQSRVIQIHRYVEQLTDQYTQIDEAWKQSHPPRPDESRDAHFASDMRTTRTLAALQRTSFPGANASDRPTRMGAFTLRGGDFAGSEYDVSLITREIEKKEKMKIRIEQGGAEIPTMLSLSGRFGTHEFSDTSSGPLTSDGGPMRCASRTLTEKCTADCNCPRAVERRSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDVIEFYYDSKQCIHYKALLKENEARRRGADQNLVWLKHAARQVGATIDLRCDNDGHEVLRLYPPGNDYLYTTFNKHPGSRPFHQTSLLQQSGEYVKHQAVARRQVCATSQSIEQTTSYAPLPSFAFPERHSAQLYGGNGNNGVVVDRSSVPNDAALNMLPTLHHVEESRSSVVFQERDETHFVTPADFSPRQHDDEDVEGKRVMTKWTEEEKHYAIQLLETYGKQWALISGMMEGSKKPEQIKNFFSNYKKKYRLDERLPPSLPVQRRKEYSATRRVKSPQPRDLATTSSRGTALLQDANLAHGQPAHEYKETCTPFLLDTLAQDPNSRAVIFSSTMASSANEDDKKKVEAEQRLEGSGYVASKAPDVQSQPQGARGSKPSGDGEKELQSPERLHYGNLLI
Sbjct:    1 MNQGNNCGGSGHERERNRGEKSVAFRGNVWPSSQKDYRSLLSESDREDRKPGNGSSVGGRSRRNVSYRRDAFDDDRELRTSGFIDFKGRERDMGLHRGRSRSDSERASWPTAPLMSSNPGGPLDNVRNRLLSASASLPSDSLQATRRCTMGDDDTSRNSRGRKEDDATSLAAAGTDRLLKLNMDRRKTGRREMEEVRHSTAARGKHKHFSWEEGPLEASHASRRPSLTQETGRSSVISSTRTLSAASIIHGKSCLYESSHNADKGHNQYLPRSDEQGVPEVFCQSLLCRPLDGGYGPRRAPWRYSDLSITEARQRRVAFELGEVQGAGVEAFAFGHDTFLTNGQVGGVEGPDFVEEYPLSRCHSTYSLDNSDILEGHGSMQAPCLPTPTKTGVGGVSRLLSVRQGTAHVSSREPRMERTHSESSGSASSGRLRLGWGQGLARRATAFEQKSPRDDAAILPKKYGARGNADFAADKPNNVELSSKVLNSDLCALKDPGLGVSKATSLQNDPSQQQFLPIADGIGLPSTSFTQSRKGREQQEKRLLQNKGAKKFFQTRRLRQMAVAYVRHVWRKNALKPAARVSLFTISSSSVGGVSAPGGVVSGKNENVPFVPSIDKKVVQEELLKTDAASSSNKQRKGSPCRFLEQEGGNVEVKRQKSACMTETSLTSATKHAEREAAQAKLQKYRALSAAAGYPLCGLLPKESMARALKVTACVRAFRPHADKNMQTVLKAEAEMVPLPCREDILSALEFVNADVERLQAEVTVVEDSILHGAAGSAAYRAPWWNRAYADVLRLRREASRKIKMLAWKVKKEQLLLEVSSEGARDKVYDSIQASNATDENANENRDIRCGALGALAKRQISREAIQSIVQSRVIQIHRYVEQLTDQYTQIDEAWKQSHPPRPDESRDAHFASDMRTTRTLAALQRTSFPGANASDRPTRMGAFTLRGGDFAGSEYDVSLITREIEKKEKMKIRIEQGGAEIPTMLSLSGRFGTHEFSDTSSGPLTSDGGPMRCASRTLTEKCTADCNCPRAVERRSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDVIEFYYDSKQCIHYKALLKENEARRRGADQNLVWLKHAARQVGATIDLRCDNDGHEVLRLYPPGNDYLYTTFNKHPGSRPFHQTSLLQQSGEYVKHQAVARRQVCATSQSIEQTTSYAPLPSFAFPERHSAQLYGGNGNNGVVVDRSSVPNDAALNMLPTLHHVEESRSSVVFQERDETHFVTPADFSPRQHDDEDVEGKRVMTKWTEEEKHYAIQLLETYGKQWALISGMMEGSKKPEQIKNFFSNYKKKYRLDERLPPSLPVQRRKEYSATRRVKSPQPRDLATTSSRGTALLQDANLAHGQPAHEYKETCTPFLLDTLAQDPNSRAVIFSSTMASSANEDDKKKVEAEQRLEGSGYVASKAPDVQSQPQGARGSKPSGDGEKELQSPERLHYGNLLI 1476          
BLAST of EWM29768.1 vs. NCBI_GenBank
Match: gi|299115599|emb|CBN75801.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 167.933 bits (424), Expect = 6.713e-38
Identity = 91/213 (42.72%), Postives = 119/213 (55.87%), Query Frame = 0
Query:  947 RGG----DFAGSEYDVSLITREIEKKEKMKIRIEQGGAEIPTMLSLSGRFGTHEFSDTSSGPLTSDGGPMRCASRTLTEKCTADCNCPRAVERRSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDVIEFYYDSKQCIHYKALLKENEARRRGADQNLVWLKHAARQVGATIDLRCDNDGHEVLRLYPPGNDYLYTTFNKHPGSR 1155
            RGG    D   S+Y+ + + ++ E K K + RI +G  E+P+ML+   R    E+ D+ +   T+DG P RC        C A CNCP AVE   +  N W+D+EKCIFLDKFL +PKNF +IASFL RKS  DV++FYYDSK  I YK LLKE   R +G          A R VGA + +  D DG     +  P  D  + T + HP SR
Sbjct: 1785 RGGRRLSDVVRSDYEEAEVVKKFEDKHKEEERIRKGAVEVPSMLTAVERRQLPEYRDSWNSRGTTDGLPARCRGLPADAACPAGCNCPAAVEAERKLSNLWTDVEKCIFLDKFLHHPKNFMRIASFLPRKSPEDVVQFYYDSKTSIDYKTLLKEAVNRNKGYAGQWNATFKAIRSVGAKVSI--DEDGQPFFPV--PQRDDSFATADMHPPSR 1993          
BLAST of EWM29768.1 vs. NCBI_GenBank
Match: gi|1210529754|dbj|GAX11585.1| (nuclear receptor co-repressor 1 [Fistulifera solaris])

HSP 1 Score: 142.51 bits (358), Expect = 2.569e-30
Identity = 142/495 (28.69%), Postives = 218/495 (44.04%), Query Frame = 0
Query:  856 LAKRQISREAIQSIVQSRV----IQIHRYVEQLTDQYTQIDEAWKQSHPPRPDESRDAHFASDMRTTRTLA-----ALQRTSFPGANA---SDRPTRMGAFTLRGGDFAGSEYDVSLITREIEKKEKMKIRIEQGGAEIPTMLSLSGRFGTHEFSDTSSGPLTSDGGPMRCASRTLTEKCTADCNCPRAVERRSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDVIEFYYDSKQCIHYKALLKENEARRRGADQNLVW--LKHAARQVGATIDLRCDNDGHEVLRLYPPGNDYLYTTFNKHPGSRPFHQTSLLQQSGEYVKHQAVARRQVCATSQSIEQTTSYAPLPSFAFPERHSAQLYGGNGNNGVVVDRSSVPNDAALNMLPTLHHVEESRSSVVFQERDETHFVTPADFSPRQHDDEDVEGKRVMTK-WTEEEKHYAIQLLETYGKQWALISGMMEGSKKPEQIKNFFSNYKK--KYRLDER 1333
             A+ Q +  A++ +V++ V     ++ ++   L ++Y     A+K++   + +E +     S M  T  +A      L+ T  PGA A   S  P R      R G+   SEY+   I  EI  KE M+ RI  GG + P  +    R  T  F +T +          +       EK  A  N              W+D EKCIFLD+FLQ+PK+FRKIASFLR K+T D I+FYYDSKQ + YK  LKE+  RR+   +  VW     AA  VGA +    D +   V  L  P ND  Y T + H    P +Q      S E+ + +A AR Q     ++  + +    +P     E    +    +     V ++   P   +L           S++SV               F     D++    ++  +K WT  EK   ++ +E  G+ W ++   + GSK   QIKN++ ++KK  K + D+R
Sbjct:  873 FARNQETHAAMEPLVKAFVRDTQTRLTKHWTTLAEEYEFRSRAYKRTR--KENEKKGKQRNSMMARTSIIARTVMPILESTGSPGAAAGRTSTNPYRRA----RRGNEVRSEYEQEQIIAEIAAKEAMEKRIAFGGCKTPRQIGAVERQLTANFYNTFTA---------QKVDVVEQEKLCAMENM-------------WTDTEKCIFLDRFLQHPKDFRKIASFLRNKTTRDCIKFYYDSKQTVSYKGALKEHIMRRKRRGEYHVWEATIQAALSVGAVVKAGTDEENPLVFTL--PENDCTYNTRDLH----PLNQEVF--DSMEFNEEEA-ARYQAKLDKEAKSKKSKKRKVPDLFLLEPEQRKYLRPDTPEQTVEEK---PLKKSL-----------SKASVA------------ESFPISMTDEQPSHARKSASKKWTASEKKIFLETVEKNGRNWKVLEDAI-GSKSISQIKNYYYDWKKGGKEKPDKR 1303          
BLAST of EWM29768.1 vs. NCBI_GenBank
Match: gi|1210528981|dbj|GAX12127.1| (nuclear receptor co-repressor 1 [Fistulifera solaris])

HSP 1 Score: 132.88 bits (333), Expect = 2.829e-27
Identity = 103/300 (34.33%), Postives = 140/300 (46.67%), Query Frame = 0
Query:  866 IQSIVQSRVIQIHRYVEQLTDQYTQIDEAWKQSHPPRPDESRDAHFASDMRTTRTLA-----ALQRTSFPGANA---SDRPTRMGAFTLRGGDFAGSEYDVSLITREIEKKEKMKIRIEQGGAEIPTMLSLSGRFGTHEFSDTSSGPLTSDGGPMRCASRTLTEKCTADCNCPRAVERRSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDVIEFYYDSKQCIHYKALLKENEARRRGADQNLVW--LKHAARQVGATIDLRCDNDGHEVLRLYPPGNDYLYTTFNKHPGSR 1155
            I+  V+     + ++   L ++Y    +A+K++   + +E +     S M  T  +A      L+ T  PGA A   S  P R      R G+   SEY+   I  EI  KE M+ RI  GG + P  +    R  T  F +T +          +       EK  A  N              W+D EKCIFLD+FLQ+PK+FRKIASFLR K+T D I+FYYDSKQ + YK  LKE+  RR+   +  VW     AA  VGA +    D +   V  L  P ND  Y T + HP  R
Sbjct:  878 IKEFVRDTQTLLTKHWTTLAEEYEFRSKAYKRTR--KENEKKGKQRNSMMARTSIIARTVMPMLESTGSPGAAAGRTSTNPYRRA----RRGNEVRSEYEQEQIIAEIAAKEAMEKRIAFGGCKTPRQIGAVERQLTANFYNTFTA---------QKVDVVEQEKLCAMENM-------------WTDTEKCIFLDRFLQHPKDFRKIASFLRNKTTRDCIKFYYDSKQTVSYKGALKEHIMRRKRRGEYHVWDATIQAALSVGAVVKAGTDEENPLVFSL--PENDCTYNTRDLHPLKR 1147          
BLAST of EWM29768.1 vs. NCBI_GenBank
Match: gi|219123997|ref|XP_002182300.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217406261|gb|EEC46201.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 126.331 bits (316), Expect = 2.817e-25
Identity = 77/211 (36.49%), Postives = 108/211 (51.18%), Query Frame = 0
Query:  947 RGGDFAGSEYDVSLITREIEKKEKMKIRIEQGGAEIPTMLSLSGRFGTHEFSDTSSGPLTSDGGPMRCASRTLTEKCTADCNCPRAVERRSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDVIEFYYDSKQCIHYKALLKENEARRRGADQNLVW--LKHAARQVGATIDLRCDNDGHEVLRLYPPGNDYLYTTFNKHPGSR 1155
            R G+   +EY+   I  E+  KE ++ RI  GG+E+P  +    R  T  +  T S            A R   E+  A+           R    W+DMEKCIFLD+F+Q+PK+FRKIASFLR K+T D + FYYDSKQ + YK  LKE+  RR+      +W     AA  VGA ++     +   +  L  P +D+ ++TF  HP  R
Sbjct: 1087 RRGNEVRTEYEQEQIIAELAAKEALEKRIATGGSELPRQIGQIERSWTATYIQTFS------------AQRVDLEEQEAEL----------RITGVWTDMEKCIFLDRFMQHPKDFRKIASFLRNKTTTDCVAFYYDSKQTLPYKGALKEHVMRRKRRGGYPIWEATIQAALSVGAVVEAGDSEEKPLIFTL--PFDDHTFSTFGLHPLKR 1273          
BLAST of EWM29768.1 vs. NCBI_GenBank
Match: gi|219128680|ref|XP_002184535.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403985|gb|EEC43934.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 126.331 bits (316), Expect = 2.866e-25
Identity = 77/211 (36.49%), Postives = 108/211 (51.18%), Query Frame = 0
Query:  947 RGGDFAGSEYDVSLITREIEKKEKMKIRIEQGGAEIPTMLSLSGRFGTHEFSDTSSGPLTSDGGPMRCASRTLTEKCTADCNCPRAVERRSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDVIEFYYDSKQCIHYKALLKENEARRRGADQNLVW--LKHAARQVGATIDLRCDNDGHEVLRLYPPGNDYLYTTFNKHPGSR 1155
            R G+   +EY+   I  E+  KE ++ RI  GG+E+P  +    R  T  +  T S            A R   E+  A+           R    W+DMEKCIFLD+F+Q+PK+FRKIASFLR K+T D + FYYDSKQ + YK  LKE+  RR+      +W     AA  VGA ++     +   +  L  P +D+ ++TF  HP  R
Sbjct: 1088 RRGNEVRTEYEQEQIIAELAAKEALEKRIATGGSELPRQIGQIERSWTATYIQTFS------------AQRVDLEEQEAEL----------RITGVWTDMEKCIFLDRFMQHPKDFRKIASFLRNKTTTDCVAFYYDSKQTLPYKGALKEHVMRRKRRGGYPIWEATIQAALSVGAVVEAGDSEEKPLIFTL--PFDDHTFSTFGLHPLKR 1274          
BLAST of EWM29768.1 vs. NCBI_GenBank
Match: gi|397613311|gb|EJK62145.1| (hypothetical protein THAOC_17257, partial [Thalassiosira oceanica])

HSP 1 Score: 114.005 bits (284), Expect = 1.214e-22
Identity = 84/225 (37.33%), Postives = 108/225 (48.00%), Query Frame = 0
Query:  931 GANASDRPTRMGAFTLRGGDFAGSEYDVSLITREIEKKEKMKIRIEQGGAEIPTMLSLSGRFGTHEFSDTSSGPLTSDGGPMRCASRTLTEKCTADCNCPRAVERRSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDVIEFYYDSKQCIHYKALLKENEARRRGADQNLVW--LKHAARQVGATIDLRCDNDGHE-VLRLYPPGNDYLYTTFNKHP 1152
            G N   RP R     +  GD   S+Y+   I  EI  KE M+ RI +GGA             +   S  SSG L  D                      +A E   ++VN WSDMEKCIFLD+FL +PK+FRKI+SFL  KST D + FYYDSK+ + YK  LKE   R++     + W     AA  VGA +    +  G E  +R+  P  DY Y T + HP
Sbjct:  185 GNNPYRRPRR----GISPGDICRSDYEQEQIIAEIAAKEAMERRIREGGAR------------SRARSGGSSG-LVDDA---------------------QAEEDERKHVNVWSDMEKCIFLDRFLHHPKDFRKISSFLVNKSTKDCVRFYYDSKKTVPYKHALKEFLQRKKRRGDVVSWDATVQAALAVGAVV---TEGTGPEDPVRISLPPGDYTYRTRSFHP 368          
BLAST of EWM29768.1 vs. NCBI_GenBank
Match: gi|635370396|emb|CCI41446.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 112.464 bits (280), Expect = 4.685e-21
Identity = 46/73 (63.01%), Postives = 58/73 (79.45%), Query Frame = 0
Query: 1038 RYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDVIEFYYDSKQCIHYKALLKENEARRRGADQNLVW 1110
            +YVNPWSD+EKCI++DKFLQ+PKNF KIA+FL  KST DVI +YY +K+ + YKALL+E + RRRGA     W
Sbjct:  945 KYVNPWSDIEKCIYVDKFLQFPKNFTKIATFLSNKSTGDVILYYYQTKKVLDYKALLREQQLRRRGAGSKNTW 1017          
BLAST of EWM29768.1 vs. NCBI_GenBank
Match: gi|695382324|ref|XP_009517364.1| (hypothetical protein PHYSODRAFT_553248 [Phytophthora sojae] >gi|348690275|gb|EGZ30089.1| hypothetical protein PHYSODRAFT_553248 [Phytophthora sojae])

HSP 1 Score: 111.309 bits (277), Expect = 1.057e-20
Identity = 45/77 (58.44%), Postives = 58/77 (75.32%), Query Frame = 0
Query: 1034 ERRSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDVIEFYYDSKQCIHYKALLKENEARRRGADQNLVW 1110
            E+    VNPW+D+EKCI++DKFLQ+PKNF +I+SFLR K+T DVI FYY +K+   YKALL+E + RRRGA     W
Sbjct: 1550 EKAEMKVNPWNDLEKCIYMDKFLQFPKNFPRISSFLRNKTTGDVIAFYYRTKKVADYKALLREQQLRRRGAGSKNTW 1626          
BLAST of EWM29768.1 vs. NCBI_GenBank
Match: gi|301093231|ref|XP_002997464.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262110720|gb|EEY68772.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 110.153 bits (274), Expect = 2.548e-20
Identity = 44/77 (57.14%), Postives = 59/77 (76.62%), Query Frame = 0
Query: 1034 ERRSRYVNPWSDMEKCIFLDKFLQYPKNFRKIASFLRRKSTHDVIEFYYDSKQCIHYKALLKENEARRRGADQNLVW 1110
            E+    VNPW+D+EKCI++DKFLQ+PKNF +I+S+LR K+T DVI+FYY +K+   YKALL+E + RRRGA     W
Sbjct: 1487 EKAEMKVNPWNDLEKCIYIDKFLQFPKNFPRISSYLRNKTTGDVIDFYYRTKKVADYKALLREQQLRRRGAGSKNTW 1563          
The following BLAST results are available for this feature:
BLAST of EWM29768.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112348|gb|EWM29768.1|0.000e+0100.00nuclear receptor corepressor 1-like protein [Nanno... [more]
gi|299115599|emb|CBN75801.1|6.713e-3842.72conserved unknown protein [Ectocarpus siliculosus][more]
gi|1210529754|dbj|GAX11585.1|2.569e-3028.69nuclear receptor co-repressor 1 [Fistulifera solar... [more]
gi|1210528981|dbj|GAX12127.1|2.829e-2734.33nuclear receptor co-repressor 1 [Fistulifera solar... [more]
gi|219123997|ref|XP_002182300.1|2.817e-2536.49predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|219128680|ref|XP_002184535.1|2.866e-2536.49predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|397613311|gb|EJK62145.1|1.214e-2237.33hypothetical protein THAOC_17257, partial [Thalass... [more]
gi|635370396|emb|CCI41446.1|4.685e-2163.01unnamed protein product [Albugo candida][more]
gi|695382324|ref|XP_009517364.1|1.057e-2058.44hypothetical protein PHYSODRAFT_553248 [Phytophtho... [more]
gi|301093231|ref|XP_002997464.1|2.548e-2057.14conserved hypothetical protein [Phytophthora infes... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna945rna945Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications