EWM21224.1, cds9449 (CDS) Nannochloropsis gaditana

Overview
NameEWM21224.1
Unique Namecds9449
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037253.1:390274..391368 -

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Properties
Property NameValue
Protein idEWM21224.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101177g1.2734.mrna
GbkeyCDS
End range.
End range391368
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:390274..391368 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM21224.1 vs. NCBI_GenBank
Match: gi|585101336|gb|EWM21224.1| (hypothetical protein Naga_101177g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 661.759 bits (1706), Expect = 0.000e+0
Identity = 364/364 (100.00%), Postives = 364/364 (100.00%), Query Frame = 0 
Query:    1 EEEEEEEEDEDEDEDEDEDEDEIEDEIEEEEEDEDEDEEEEEEEEEDEDEEEDEVEDEDEDEDEDEDEDEIEEEEKDEDVIGEVDWDDDMTQAQDDDLTDDDDYEESMAALQAAEKEGALSSILPVGSTVPEGEEEAGASVLPVQDTEMKEDEEASAGVLPVTPVEDAVAPEASESQVATPPSPMRTPRPTNAVPLPEASGDKEAPEAIAEGGGLPGGNGGAGNGGGMPNLGGIGNGPVGEMVKEGASNLVEGSSPMAGTEGEAGSESNPMSGAEEEALVEDANAREAESEATTTTTEILPPQADADPSAQSNVKEVLPVEDTVPADGTTGEETVVHSGAGLARTSGLVLAATLVLALVPALAL 364
            EEEEEEEEDEDEDEDEDEDEDEIEDEIEEEEEDEDEDEEEEEEEEEDEDEEEDEVEDEDEDEDEDEDEDEIEEEEKDEDVIGEVDWDDDMTQAQDDDLTDDDDYEESMAALQAAEKEGALSSILPVGSTVPEGEEEAGASVLPVQDTEMKEDEEASAGVLPVTPVEDAVAPEASESQVATPPSPMRTPRPTNAVPLPEASGDKEAPEAIAEGGGLPGGNGGAGNGGGMPNLGGIGNGPVGEMVKEGASNLVEGSSPMAGTEGEAGSESNPMSGAEEEALVEDANAREAESEATTTTTEILPPQADADPSAQSNVKEVLPVEDTVPADGTTGEETVVHSGAGLARTSGLVLAATLVLALVPALAL
Sbjct:    1 EEEEEEEEDEDEDEDEDEDEDEIEDEIEEEEEDEDEDEEEEEEEEEDEDEEEDEVEDEDEDEDEDEDEDEIEEEEKDEDVIGEVDWDDDMTQAQDDDLTDDDDYEESMAALQAAEKEGALSSILPVGSTVPEGEEEAGASVLPVQDTEMKEDEEASAGVLPVTPVEDAVAPEASESQVATPPSPMRTPRPTNAVPLPEASGDKEAPEAIAEGGGLPGGNGGAGNGGGMPNLGGIGNGPVGEMVKEGASNLVEGSSPMAGTEGEAGSESNPMSGAEEEALVEDANAREAESEATTTTTEILPPQADADPSAQSNVKEVLPVEDTVPADGTTGEETVVHSGAGLARTSGLVLAATLVLALVPALAL 364
[Close]
BLAST of EWM21224.1 vs. NCBI_GenBank
Match: gi|553195691|ref|XP_005856185.1| (hypothetical protein NGA_0319400 [Nannochloropsis gaditana CCMP526] >gi|422292863|gb|EKU20165.1| hypothetical protein NGA_0319400 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 650.588 bits (1677), Expect = 0.000e+0
Identity = 358/364 (98.35%), Postives = 361/364 (99.18%), Query Frame = 0 
Query:    1 EEEEEEEEDEDEDEDEDEDEDEIEDEIEEEEEDEDEDEEEEEEEEEDEDEEEDEVEDEDEDEDEDEDEDEIEEEEKDEDVIGEVDWDDDMTQAQDDDLTDDDDYEESMAALQAAEKEGALSSILPVGSTVPEGEEEAGASVLPVQDTEMKEDEEASAGVLPVTPVEDAVAPEASESQVATPPSPMRTPRPTNAVPLPEASGDKEAPEAIAEGGGLPGGNGGAGNGGGMPNLGGIGNGPVGEMVKEGASNLVEGSSPMAGTEGEAGSESNPMSGAEEEALVEDANAREAESEATTTTTEILPPQADADPSAQSNVKEVLPVEDTVPADGTTGEETVVHSGAGLARTSGLVLAATLVLALVPALAL 364
            EEEEEEEEDEDEDEDEDEDEDEIEDEIEEE+EDEDEDEEEEEEE+E+EDEEEDEVEDEDEDEDEDEDE  IEEEEKDEDVIGEVDWDDDMTQAQDDDLTDDDDYEESMAALQAAEKEGALSSILPVGSTVPEGEEEAGASVLPVQDTEMKEDEEASAGVLPVTPVEDAVAPEASESQVATPPSPMRTPRPTNAVPLPEASGDKEAPEAIAEGGGLPGGNGGAGNGGGMPNLGGIG GPVGEMVKEGASNLVEGSSPMAGTEGEAGSESNPMSGAEEEALVEDANAREAESEATTTTTEILPPQADADPSAQSNVKEVLPVEDTVPADGTTGEETVVHSGAGLARTSGLVLAATLVLALVPALAL
Sbjct:  120 EEEEEEEEDEDEDEDEDEDEDEIEDEIEEEDEDEDEDEEEEEEEDEEEDEEEDEVEDEDEDEDEDEDE--IEEEEKDEDVIGEVDWDDDMTQAQDDDLTDDDDYEESMAALQAAEKEGALSSILPVGSTVPEGEEEAGASVLPVQDTEMKEDEEASAGVLPVTPVEDAVAPEASESQVATPPSPMRTPRPTNAVPLPEASGDKEAPEAIAEGGGLPGGNGGAGNGGGMPNLGGIGKGPVGEMVKEGASNLVEGSSPMAGTEGEAGSESNPMSGAEEEALVEDANAREAESEATTTTTEILPPQADADPSAQSNVKEVLPVEDTVPADGTTGEETVVHSGAGLARTSGLVLAATLVLALVPALAL 481
The following BLAST results are available for this feature:
BLAST of EWM21224.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585101336|gb|EWM21224.1|0.000e+0100.00hypothetical protein Naga_101177g1, partial [Nanno... [more]
gi|553195691|ref|XP_005856185.1|0.000e+098.35hypothetical protein NGA_0319400 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9480rna9480Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications