EWM21227.1, cds9446 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21227.1 vs. NCBI_GenBank
Match: gi|585101340|gb|EWM21227.1| (px domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 640.573 bits (1651), Expect = 0.000e+0 Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0
Query: 1 MLLSKMGNQPPTKATLSGLVTRIWRYPYRANGQEMEVLIMLRHHRHKGEKIIYVDGQIVHHSIDRIDSGGIVSFEILQGKVPCELTVVDYPGLTSYSLVIRGRPWACDTEQADGGEGGRQPVGLSGNLSIESVTVASVALLPLDTEKGGDDREKRKTREDKLEDEVEEEEEETLLQSSSRGVVRSGGKAKVGAFYTLKTRWAATEGTGAEEGEQGANGRAGPKEKEHRFRFRDFDKLDVKIRSYFWGHHLASSLPRLPPKYLKALTAHTSPSFLEERRAALDAYMQRLQNFPYVQRNPDWQAFVLGEPGLR 311
MLLSKMGNQPPTKATLSGLVTRIWRYPYRANGQEMEVLIMLRHHRHKGEKIIYVDGQIVHHSIDRIDSGGIVSFEILQGKVPCELTVVDYPGLTSYSLVIRGRPWACDTEQADGGEGGRQPVGLSGNLSIESVTVASVALLPLDTEKGGDDREKRKTREDKLEDEVEEEEEETLLQSSSRGVVRSGGKAKVGAFYTLKTRWAATEGTGAEEGEQGANGRAGPKEKEHRFRFRDFDKLDVKIRSYFWGHHLASSLPRLPPKYLKALTAHTSPSFLEERRAALDAYMQRLQNFPYVQRNPDWQAFVLGEPGLR
Sbjct: 1 MLLSKMGNQPPTKATLSGLVTRIWRYPYRANGQEMEVLIMLRHHRHKGEKIIYVDGQIVHHSIDRIDSGGIVSFEILQGKVPCELTVVDYPGLTSYSLVIRGRPWACDTEQADGGEGGRQPVGLSGNLSIESVTVASVALLPLDTEKGGDDREKRKTREDKLEDEVEEEEEETLLQSSSRGVVRSGGKAKVGAFYTLKTRWAATEGTGAEEGEQGANGRAGPKEKEHRFRFRDFDKLDVKIRSYFWGHHLASSLPRLPPKYLKALTAHTSPSFLEERRAALDAYMQRLQNFPYVQRNPDWQAFVLGEPGLR 311
BLAST of EWM21227.1 vs. NCBI_GenBank
Match: gi|553180403|ref|XP_005853399.1| (px domain containing protein [Nannochloropsis gaditana CCMP526] >gi|422295662|gb|EKU22961.1| px domain containing protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 628.632 bits (1620), Expect = 0.000e+0 Identity = 305/306 (99.67%), Postives = 305/306 (99.67%), Query Frame = 0
Query: 6 MGNQPPTKATLSGLVTRIWRYPYRANGQEMEVLIMLRHHRHKGEKIIYVDGQIVHHSIDRIDSGGIVSFEILQGKVPCELTVVDYPGLTSYSLVIRGRPWACDTEQADGGEGGRQPVGLSGNLSIESVTVASVALLPLDTEKGGDDREKRKTREDKLEDEVEEEEEETLLQSSSRGVVRSGGKAKVGAFYTLKTRWAATEGTGAEEGEQGANGRAGPKEKEHRFRFRDFDKLDVKIRSYFWGHHLASSLPRLPPKYLKALTAHTSPSFLEERRAALDAYMQRLQNFPYVQRNPDWQAFVLGEPGLR 311
MGNQPPTKATLSGLVTRIWRYPYRANGQEMEVLIMLRHHRHKGEKIIYVDGQIVHHSIDRIDSGGIVSFEILQGKVPCELTVVDYPGLTSYSLVIRGRPWACDTEQADGGEGGRQPVGLS NLSIESVTVASVALLPLDTEKGGDDREKRKTREDKLEDEVEEEEEETLLQSSSRGVVRSGGKAKVGAFYTLKTRWAATEGTGAEEGEQGANGRAGPKEKEHRFRFRDFDKLDVKIRSYFWGHHLASSLPRLPPKYLKALTAHTSPSFLEERRAALDAYMQRLQNFPYVQRNPDWQAFVLGEPGLR
Sbjct: 1 MGNQPPTKATLSGLVTRIWRYPYRANGQEMEVLIMLRHHRHKGEKIIYVDGQIVHHSIDRIDSGGIVSFEILQGKVPCELTVVDYPGLTSYSLVIRGRPWACDTEQADGGEGGRQPVGLSENLSIESVTVASVALLPLDTEKGGDDREKRKTREDKLEDEVEEEEEETLLQSSSRGVVRSGGKAKVGAFYTLKTRWAATEGTGAEEGEQGANGRAGPKEKEHRFRFRDFDKLDVKIRSYFWGHHLASSLPRLPPKYLKALTAHTSPSFLEERRAALDAYMQRLQNFPYVQRNPDWQAFVLGEPGLR 306
BLAST of EWM21227.1 vs. NCBI_GenBank
Match: gi|553195737|ref|XP_005856197.1| (px domain containing protein, partial [Nannochloropsis gaditana CCMP526] >gi|422292875|gb|EKU20177.1| px domain containing protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 593.964 bits (1530), Expect = 0.000e+0 Identity = 289/290 (99.66%), Postives = 289/290 (99.66%), Query Frame = 0
Query: 6 MGNQPPTKATLSGLVTRIWRYPYRANGQEMEVLIMLRHHRHKGEKIIYVDGQIVHHSIDRIDSGGIVSFEILQGKVPCELTVVDYPGLTSYSLVIRGRPWACDTEQADGGEGGRQPVGLSGNLSIESVTVASVALLPLDTEKGGDDREKRKTREDKLEDEVEEEEEETLLQSSSRGVVRSGGKAKVGAFYTLKTRWAATEGTGAEEGEQGANGRAGPKEKEHRFRFRDFDKLDVKIRSYFWGHHLASSLPRLPPKYLKALTAHTSPSFLEERRAALDAYMQRLQNFPYVQ 295
MGNQPPTKATLSGLVTRIWRYPYRANGQEMEVLIMLRHHRHKGEKIIYVDGQIVHHSIDRIDSGGIVSFEILQGKVPCELTVVDYPGLTSYSLVIRGRPWACDTEQADGGEGGRQPVGLS NLSIESVTVASVALLPLDTEKGGDDREKRKTREDKLEDEVEEEEEETLLQSSSRGVVRSGGKAKVGAFYTLKTRWAATEGTGAEEGEQGANGRAGPKEKEHRFRFRDFDKLDVKIRSYFWGHHLASSLPRLPPKYLKALTAHTSPSFLEERRAALDAYMQRLQNFPYVQ
Sbjct: 1 MGNQPPTKATLSGLVTRIWRYPYRANGQEMEVLIMLRHHRHKGEKIIYVDGQIVHHSIDRIDSGGIVSFEILQGKVPCELTVVDYPGLTSYSLVIRGRPWACDTEQADGGEGGRQPVGLSENLSIESVTVASVALLPLDTEKGGDDREKRKTREDKLEDEVEEEEEETLLQSSSRGVVRSGGKAKVGAFYTLKTRWAATEGTGAEEGEQGANGRAGPKEKEHRFRFRDFDKLDVKIRSYFWGHHLASSLPRLPPKYLKALTAHTSPSFLEERRAALDAYMQRLQNFPYVQ 290
BLAST of EWM21227.1 vs. NCBI_GenBank
Match: gi|676389975|ref|XP_009038266.1| (hypothetical protein AURANDRAFT_71905 [Aureococcus anophagefferens] >gi|323451151|gb|EGB07029.1| hypothetical protein AURANDRAFT_71905 [Aureococcus anophagefferens]) HSP 1 Score: 68.1662 bits (165), Expect = 4.816e-9 Identity = 41/98 (41.84%), Postives = 52/98 (53.06%), Query Frame = 0
Query: 207 TGAEEGEQGANGRAGPKEKEHRFRFRDFDKLDVKIRSYFWGHHLASSLPRLPPKYLKALTAHTSPSFLEERRAALDAYMQRLQNFPYVQRNPDWQAFV 304
T A +G++ A R HR RFRDF LD I GHH+ +S+PRLP K LK H +FLE RR LD Y+ +L + P+V P FV
Sbjct: 148 THASKGDEVATTRV------HR-RFRDFADLDEAITGALAGHHVRNSVPRLPLKKLKLFQDHNDAAFLEARRRDLDGYVAKLVHVPHVWATPPAAPFV 238
BLAST of EWM21227.1 vs. NCBI_GenBank
Match: gi|299116611|emb|CBN76238.1| (PX domain containing protein (Partial), partial [Ectocarpus siliculosus]) HSP 1 Score: 67.0106 bits (162), Expect = 6.802e-9 Identity = 37/78 (47.44%), Postives = 46/78 (58.97%), Query Frame = 0
Query: 227 HRFRFRDFDKLDVKIRSYFWGHHLASSLPRLPPKYLKALTAHTSPSFLEERRAALDAYMQRLQNFPYVQRNPDWQAFV 304
HR RFRDF L ++ S GHHL SSLPR P K K T H SF+EERR AL+ Y++ L P+V +AF+
Sbjct: 85 HR-RFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDLSFVEERRKALEQYLKTLLQLPHVSTLDSTRAFL 161
BLAST of EWM21227.1 vs. NCBI_GenBank
Match: gi|694541252|ref|XP_009496991.1| (hypothetical protein H696_04851 [Fonticula alba] >gi|627946565|gb|KCV68559.1| hypothetical protein H696_04851 [Fonticula alba]) HSP 1 Score: 62.003 bits (149), Expect = 1.927e-8 Identity = 29/79 (36.71%), Postives = 47/79 (59.49%), Query Frame = 0
Query: 230 RFRDFDKLDVKIRSYFWGHHLASSLPRLPPKYLKALTAHTSPSFLEERRAALDAYMQRLQNFPYVQRNPDWQAFVLGEP 308
RF +F L ++R + G+HLAS++P PPK+ K + H F++ER+ L+ YMQ L P +++ P + F+ G P
Sbjct: 43 RFSEFVTLHNEVRKAYKGNHLASNIPVFPPKHPKFMIDHMDDHFVDERKFNLERYMQLLSRLPKIEQVPMYVDFLEGRP 121 The following BLAST results are available for this feature:
BLAST of EWM21227.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 6
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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