EWM21243.1, cds9431 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21243.1 vs. NCBI_GenBank
Match: gi|585101371|gb|EWM21243.1| (SGF29 tudor-like domain protein [Nannochloropsis gaditana]) HSP 1 Score: 570.466 bits (1469), Expect = 0.000e+0 Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 0
Query: 1 MAYAKHHEESGTYLEDFLERLQPLPNDIQRSFHLMRELDKDATELHVRLRGLEKQYLGQAKRSLQGAKESKPEERLKLVEDKEASAEIADLRALIMAKQREKIDVVNQVSDMMKHHMRMLKVDMDNFQTELRETGEYDFLGARKDDAVAFKQNVYETHFVLGKVVNYRADSGAYEVVDVDDDSHIYTLPETQIVLLNPGSEAQRLKYQKGDEVFAVYPETTSFYLGTIAQPPRRGMGHSGLGQDVPKLAVQFQDDADEFGHTPIRWVPVQHVFKAI 276
MAYAKHHEESGTYLEDFLERLQPLPNDIQRSFHLMRELDKDATELHVRLRGLEKQYLGQAKRSLQGAKESKPEERLKLVEDKEASAEIADLRALIMAKQREKIDVVNQVSDMMKHHMRMLKVDMDNFQTELRETGEYDFLGARKDDAVAFKQNVYETHFVLGKVVNYRADSGAYEVVDVDDDSHIYTLPETQIVLLNPGSEAQRLKYQKGDEVFAVYPETTSFYLGTIAQPPRRGMGHSGLGQDVPKLAVQFQDDADEFGHTPIRWVPVQHVFKAI
Sbjct: 1 MAYAKHHEESGTYLEDFLERLQPLPNDIQRSFHLMRELDKDATELHVRLRGLEKQYLGQAKRSLQGAKESKPEERLKLVEDKEASAEIADLRALIMAKQREKIDVVNQVSDMMKHHMRMLKVDMDNFQTELRETGEYDFLGARKDDAVAFKQNVYETHFVLGKVVNYRADSGAYEVVDVDDDSHIYTLPETQIVLLNPGSEAQRLKYQKGDEVFAVYPETTSFYLGTIAQPPRRGMGHSGLGQDVPKLAVQFQDDADEFGHTPIRWVPVQHVFKAI 276
BLAST of EWM21243.1 vs. NCBI_GenBank
Match: gi|298711365|emb|CBJ32510.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 176.792 bits (447), Expect = 1.173e-50 Identity = 106/274 (38.69%), Postives = 159/274 (58.03%), Query Frame = 0
Query: 1 MAYAKHHEESGTYLEDFLERLQPLPNDIQRSFHLMRELDKDATELHVRLRGLEKQYLGQAKRSLQGAKESKPEERLKLVEDKEASAEIADLRALIMAKQREKIDVVNQVSDMMKHHMRMLKVDMDNFQTELRETGEYDFLGARKDDAVAFKQNVYETHFVLGKVVNYRADSGAYEVVDVDDDSHIYTLPETQIVLLNPGSEAQRLKYQKGDEVFAVYPETTSFYLGTIAQPPRRGMGHSGLGQDVPKLAVQFQDDADEFGHTPIRWVPVQHVFK 274
MAY +E T+++DF++ + +PN+I+R+ LMR LDKDA L L L ++LGQA+ ++ +S+ + LV+D AEI L + EK+ + +Q M+ ++ L D+ +F+ L GE+D A+ D VAF+++ E +VLG+V+++ ++G YEV+D DD+S T+ E Q++ L E + + KGD+V AVY +TTSFY TIA PP RG G G G VQF DDADE G TP R VP+ H+ K
Sbjct: 1 MAYRGPMQEEATFVDDFMDGMTTMPNEIRRNSQLMRTLDKDAHGLSSELEALHNKFLGQAREKMKARGDSQELDPKVLVDDPPLMAEIDSLFSRTKQIVDEKVAIADQTHQMVADRLKRLTTDLASFEQTLHSQGEFDVGAAQPGDQVAFQEDP-EADWVLGRVLSWMHETGQYEVMDEDDNSKKLTMDEHQVIPL----EGRTERLSKGDDVLAVYVDTTSFYHATIAIPP-RGRGQIGNGGTA---HVQFVDDADEHGVTPHRAVPIIHIIK 265
BLAST of EWM21243.1 vs. NCBI_GenBank
Match: gi|219120346|ref|XP_002180913.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407629|gb|EEC47565.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 124.02 bits (310), Expect = 1.189e-29 Identity = 86/284 (30.28%), Postives = 148/284 (52.11%), Query Frame = 0
Query: 12 TYLEDFLERLQPLPNDIQRSFHLMRELDKDATELHVRLRGLEKQYLGQAK------------------RSLQGAKESKPE--ERLKLVEDKEASAEIADLRALIMAKQREKIDVVNQVSDMMKHHMRMLKVDMDNFQTELRETGEYDFLGAR--KDDAVAFKQNVYETHFVLGKVVNYRADSGAYEVVDVDDDSH-IYTLPETQIVLLNPGSEAQRLKYQKGDEVFAVYPETTSFYLGTIAQPPRRGMGHSGLGQDVPKLAVQFQDDADEFGHTPIRWVPVQHV 272
TYLE F+E L LP++++R+ L+++LDK + LR L+++Y+ QA+ R + G + P E ++ V++ E +I + + K EKI + Q D + + L D+ + L+ TG++ + K + +A Q E+ ++L KVV + +G Y++ D D +S+ ++TLPE+Q+++L K + GD V+AVYP+TTSFY T+ Q PR+ P + V F DD+DEFG T ++VP+++
Sbjct: 65 TYLEAFIETLSTLPHEVRRNMDLIKDLDKASGVRGETLRQLQQRYIHQAEDKMMQLELVEREDGTHGVRVIDGTEVIIPTTYELVEYVQNAELERQIQQAQEDCLQKADEKIAIAQQALDRIDAVCQRLDHDLGAMELLLQNTGDFQTQETKTAKPNDLAACQITPESEWILAKVVTFDPQTGVYKLADEDVESNKLFTLPESQVIILYAIE-----KLRAGDSVYAVYPDTTSFYPATVVQAPRKA--------STPFVTVNFVDDSDEFGVTHDKFVPLKYT 335
BLAST of EWM21243.1 vs. NCBI_GenBank
Match: gi|1210516202|dbj|GAX25018.1| (SAGA-associated factor 29 [Fistulifera solaris]) HSP 1 Score: 117.857 bits (294), Expect = 6.270e-28 Identity = 89/287 (31.01%), Postives = 141/287 (49.13%), Query Frame = 0
Query: 12 TYLEDFLERLQPLPNDIQRSFHLMRELDKDATELHVRLRGLEKQYLGQAKRSL-----------QGAKESKPE-------------ERLKLVEDKEASAEIADLRALIMAKQREKIDVVNQVSDMMKHHMRMLKVDMDNFQTELRETGEYDFLGARKDDAVAFKQNVYETHFVLGKVVNYRADSGAYEVVDVDDDSH-IYTLPETQIVLLNPGSEAQRLKYQKGDEVFAVYPETTSFYLGTIAQPPRRGMGHSGLGQDVPKLAVQFQDDADEFGHTPIRWVPVQHVF 273
TYLE F+E L LP ++R+ L+++LD+ +L+ L YL QA+ + +G + + E E + D +A +I L+A + K EK+ V Q + + + L D+ L+ GE+ + + +A Q T ++L KV+ + + Y++VD D +SH ++ LPE Q+V+L G + + KGD VFAVYP+TTSFY T+ Q PR+ G S P + V F DD+DEFG T + V +QH+
Sbjct: 7 TYLESFVESLTTLPYQVRRNLELVQDLDRSYQSDLAKLQELYTAYLQQAEEKVLQLEVAPMETGKGVRVIRKEDAEKAPIIIPTTAELMAYTYDADAMRQIEALQADCLQKADEKVCVARQAYEWIDAVVERLDDDLQALSKILQAQGEFQQEEVAQPNDLAACQ--LGTEWILAKVLEFDTKTRTYKLVDEDVESHKVFHLPEDQVVILR-GVD----RLSKGDTVFAVYPDTTSFYQATVVQVPRKTAGQSS-----PFVIVSFMDDSDEFGVTHDKTVQLQHIM 281
BLAST of EWM21243.1 vs. NCBI_GenBank
Match: gi|1210514418|dbj|GAX26748.1| (SAGA-associated factor 29 [Fistulifera solaris]) HSP 1 Score: 117.857 bits (294), Expect = 6.747e-28 Identity = 88/287 (30.66%), Postives = 140/287 (48.78%), Query Frame = 0
Query: 12 TYLEDFLERLQPLPNDIQRSFHLMRELDKDATELHVRLRGLEKQYLGQAKRSL-----------QGAK-------ESKP------EERLKLVEDKEASAEIADLRALIMAKQREKIDVVNQVSDMMKHHMRMLKVDMDNFQTELRETGEYDFLGARKDDAVAFKQNVYETHFVLGKVVNYRADSGAYEVVDVDDDSH-IYTLPETQIVLLNPGSEAQRLKYQKGDEVFAVYPETTSFYLGTIAQPPRRGMGHSGLGQDVPKLAVQFQDDADEFGHTPIRWVPVQHVF 273
TYLE F+E L LP ++R+ L+++LD+ +L+ L YL QA+ + +G + E+ P E + D +A +I L+A + K EK+ V Q + + + L D+ L+ GE+ + + +A Q T ++L KV+ + + Y+++D D +SH ++ LPE Q+V+L + KGD VFAVYP+TTSFY T+ Q PR+ G S P + V F DD+DEFG T + V +QH+
Sbjct: 7 TYLEAFVESLTTLPYQVRRNLELVQDLDRSYQSDLAKLQELYTAYLQQAEEKVLQLEVAPMEAGKGVRVIRKEDAENAPIIIPTTAELMNYTYDADAMRQIEALQADCLQKADEKVCVAKQAYEWIDAVVERLDDDLQTLSKLLQAQGEFQQEEVAQPNDLAACQ--VGTEWILAKVLEFDTATRTYKLIDEDVESHKVFHLPEDQVVILRCLD-----RLSKGDTVFAVYPDTTSFYQATVVQVPRKTAGQSS-----PFVIVSFMDDSDEFGVTHDKAVQLQHIM 281
BLAST of EWM21243.1 vs. NCBI_GenBank
Match: gi|1072229958|gb|OEU14692.1| (hypothetical protein FRACYDRAFT_188007 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 96.6709 bits (239), Expect = 6.894e-20 Identity = 83/303 (27.39%), Postives = 140/303 (46.20%), Query Frame = 0
Query: 12 TYLEDFLERLQPLPNDIQRSFHLMRELDKDATELHVRLRGLEKQYL--------------GQAKRSLQGAKESK--------PEERLKLVEDKEASAEIADLRALIMAKQREKIDVVNQVSDMMKHHMRMLKVDMDNFQTELRETGEY--DF-------------LGARKDDAVAFKQNVYETHFVLGKVVNYRADSGAYEVVDVDDDSH-IYTLPETQIVLLNPGSEAQRLK-YQKGDEVFAVYPETTSFYLGTIAQPPRRGMGHSGLGQDVPKLAVQFQDDAD-EFGHTPIRWVPVQHVFK 274
TYLE F+E L LP +++R+ LM+++D + L L+ Y+ G+ R L + + EE + V + ++I LRA + + EK+++ Q M+ + + L D+ + EL + DF GA K + +A Q + ++L KVV + +G + + D D +S+ ++ LP + +++L +R++ + GD VFAVYP+TTSFY GTIAQ PR+ G + + F DD D G T + V ++HV
Sbjct: 11 TYLEGFIESLSTLPAELRRNLDLMKDMDGSCSTLMDETMRLQLDYIRRVEDKIGRLEVVDGEGVRVLSNNDDIRKLPVVIPTTEELMAYVHEPTTLSQIESLRADSLQQAEEKVEIAKQTYKMIDNLYQKLDADLRQREMELSLSTRNGPDFHHHHPSNATATMNQGAPKLNDLAAIQVPGTSDWILAKVVTHDPKTGMFTLSDEDVESNKVFNLPASSVIIL------ERMRNIRSGDVVFAVYPDTTSFYQGTIAQQPRKAAGGGMF------VTITFLDDEDAATGETHDKAVLLKHVMS 301
BLAST of EWM21243.1 vs. NCBI_GenBank
Match: gi|566014525|gb|ETI37436.1| (hypothetical protein F443_16573 [Phytophthora parasitica P1569] >gi|567951973|gb|ETK77658.1| hypothetical protein L915_16107 [Phytophthora parasitica] >gi|567980649|gb|ETL31103.1| hypothetical protein L916_16000 [Phytophthora parasitica] >gi|570942040|gb|ETP07297.1| hypothetical protein F441_16402 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 87.4261 bits (215), Expect = 1.164e-16 Identity = 60/177 (33.90%), Postives = 95/177 (53.67%), Query Frame = 0
Query: 11 GTYLEDFLERLQPLPNDIQRSFHLMRELDKDATELHVRLRGLEKQYLGQAK-----RSLQGAKESKPEERLK-LVEDKEASAEIADLRALIMAKQREKIDVVNQVSDMMKHHMRMLKVDMDNFQTELRETGEY--DFLGARKDDAVAFKQNVYE-THFVLGKVVNYRADSGAYEVVD 178
GTY+ED+LE + LP++I+R+F LMRELDK + L L+ +K YL A+ R K E+ L+ L+E + ++ + AL++ K EKI + Q D++ HH+R L D++++ L+ GEY D RK VA V++ +H V V + +GA + D
Sbjct: 2 GTYVEDYLESMYLLPSEIKRNFDLMRELDKTSYPLLEELKTTQKTYLTSARQKVLARCADATKGEATEQELRELIEADDMVQKLQEKHALVVQKLDEKIAIAAQSYDIVDHHIRRLDRDLESYSALLKANGEYQEDSRPQRKKQKVAAASTVHQVSHTVPNVNVRSKNSTGAGSMKD 178
BLAST of EWM21243.1 vs. NCBI_GenBank
Match: gi|570318266|gb|ETO66214.1| (hypothetical protein F444_16550 [Phytophthora parasitica P1976]) HSP 1 Score: 87.4261 bits (215), Expect = 1.188e-16 Identity = 60/177 (33.90%), Postives = 95/177 (53.67%), Query Frame = 0
Query: 11 GTYLEDFLERLQPLPNDIQRSFHLMRELDKDATELHVRLRGLEKQYLGQAK-----RSLQGAKESKPEERLK-LVEDKEASAEIADLRALIMAKQREKIDVVNQVSDMMKHHMRMLKVDMDNFQTELRETGEY--DFLGARKDDAVAFKQNVYE-THFVLGKVVNYRADSGAYEVVD 178
GTY+ED+LE + LP++I+R+F LMRELDK + L L+ +K YL A+ R K E+ L+ L+E + ++ + AL++ K EKI + Q D++ HH+R L D++++ L+ GEY D RK VA V++ +H V V + +GA + D
Sbjct: 2 GTYVEDYLESMYLLPSEIKRNFDLMRELDKTSYPLLEELKTTQKTYLTSARQKVLARCADATKGEATEQELRELIEADDMVQKLQEKHALVVQKLDEKIAIAAQSYDIVDHHIRRLDRDLESYSALLKANGEYQEDSRPQRKKQKVAAASTVHQVSHTVPNVNVRSKNSTGAGSMKD 178
BLAST of EWM21243.1 vs. NCBI_GenBank
Match: gi|675205795|ref|XP_008911782.1| (hypothetical protein PPTG_15786 [Phytophthora parasitica INRA-310] >gi|568010167|gb|ETL84357.1| hypothetical protein L917_15798 [Phytophthora parasitica] >gi|568040062|gb|ETM37529.1| hypothetical protein L914_15928 [Phytophthora parasitica] >gi|568087961|gb|ETN02825.1| hypothetical protein PPTG_15786 [Phytophthora parasitica INRA-310]) HSP 1 Score: 87.4261 bits (215), Expect = 1.355e-16 Identity = 59/172 (34.30%), Postives = 93/172 (54.07%), Query Frame = 0
Query: 11 GTYLEDFLERLQPLPNDIQRSFHLMRELDKDATELHVRLRGLEKQYLGQAK-----RSLQGAKESKPEERLK-LVEDKEASAEIADLRALIMAKQREKIDVVNQVSDMMKHHMRMLKVDMDNFQTELRETGEY--DFLGARKDDAVAFKQNVYE-THFVLGKVVNYRADSGA 173
GTY+ED+LE + LP++I+R+F LMRELDK + L L+ +K YL A+ R K E+ L+ L+E + ++ + AL++ K EKI + Q D++ HH+R L D++++ L+ GEY D RK VA V++ +H V V + +GA
Sbjct: 2 GTYVEDYLESMYLLPSEIKRNFDLMRELDKTSYPLLEELKTTQKTYLTSARQKVLARCADATKGEATEQELRELIEADDMVQKLQEKHALVVQKLDEKIAIAAQSYDIVDHHIRRLDRDLESYSALLKANGEYQEDSRPQRKKQKVAAASTVHQVSHTVPNVNVRSKNSTGA 173
BLAST of EWM21243.1 vs. NCBI_GenBank
Match: gi|970651828|gb|KUF90591.1| (IQ domain-containing protein H [Phytophthora nicotianae]) HSP 1 Score: 87.4261 bits (215), Expect = 1.514e-16 Identity = 59/172 (34.30%), Postives = 93/172 (54.07%), Query Frame = 0
Query: 11 GTYLEDFLERLQPLPNDIQRSFHLMRELDKDATELHVRLRGLEKQYLGQAK-----RSLQGAKESKPEERLK-LVEDKEASAEIADLRALIMAKQREKIDVVNQVSDMMKHHMRMLKVDMDNFQTELRETGEY--DFLGARKDDAVAFKQNVYE-THFVLGKVVNYRADSGA 173
GTY+ED+LE + LP++I+R+F LMRELDK + L L+ +K YL A+ R K E+ L+ L+E + ++ + AL++ K EKI + Q D++ HH+R L D++++ L+ GEY D RK VA V++ +H V V + +GA
Sbjct: 2 GTYVEDYLESMYLLPSEIKRNFDLMRELDKTSYPLLEELKTTQKAYLTSARQKVLARCADATKGEATEQELRELIEADDMVQKLQEKHALVVQKLDEKIAIAAQSYDIVDHHIRRLDRDLESYSALLKANGEYQEDSRPQRKKQKVAAASTVHQVSHTVPNVNVRSKNSTGA 173 The following BLAST results are available for this feature:
BLAST of EWM21243.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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