EWM21250.1, cds9424 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21250.1 vs. NCBI_GenBank
Match: gi|585101383|gb|EWM21250.1| (hypothetical protein Naga_100609g1 [Nannochloropsis gaditana]) HSP 1 Score: 615.15 bits (1585), Expect = 0.000e+0 Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 0
Query: 1 MKDTELPDTEQLGRDAHPRTSLSHLRIAYALMLVLSLASMWKMGSRRELLVGTEITASIPPIERNKSLFYVTTHLSPSHYEFFQKCWPSLIAKSQLYKESDFLIFATGSNASNIDWSVLNATFANATYAVQVMDNPGYQEGAMLALTEAFSKHWFDGYEWVIRVNPDVLIRNDTFLRKSMQDSSIKGIFADCLETPCATGTNCTNRLIHTDFFAIRPEAVSEQAVLEARSKQTNAERMATQAFSSIVLAGADSWVPNVGPLGLQCRVGGVASPVMHTHNQRQVHPQCLSWYD 292
MKDTELPDTEQLGRDAHPRTSLSHLRIAYALMLVLSLASMWKMGSRRELLVGTEITASIPPIERNKSLFYVTTHLSPSHYEFFQKCWPSLIAKSQLYKESDFLIFATGSNASNIDWSVLNATFANATYAVQVMDNPGYQEGAMLALTEAFSKHWFDGYEWVIRVNPDVLIRNDTFLRKSMQDSSIKGIFADCLETPCATGTNCTNRLIHTDFFAIRPEAVSEQAVLEARSKQTNAERMATQAFSSIVLAGADSWVPNVGPLGLQCRVGGVASPVMHTHNQRQVHPQCLSWYD
Sbjct: 1 MKDTELPDTEQLGRDAHPRTSLSHLRIAYALMLVLSLASMWKMGSRRELLVGTEITASIPPIERNKSLFYVTTHLSPSHYEFFQKCWPSLIAKSQLYKESDFLIFATGSNASNIDWSVLNATFANATYAVQVMDNPGYQEGAMLALTEAFSKHWFDGYEWVIRVNPDVLIRNDTFLRKSMQDSSIKGIFADCLETPCATGTNCTNRLIHTDFFAIRPEAVSEQAVLEARSKQTNAERMATQAFSSIVLAGADSWVPNVGPLGLQCRVGGVASPVMHTHNQRQVHPQCLSWYD 292
BLAST of EWM21250.1 vs. NCBI_GenBank
Match: gi|585099894|gb|EWM20359.1| (hypothetical protein Naga_100877g2 [Nannochloropsis gaditana]) HSP 1 Score: 364.385 bits (934), Expect = 7.144e-124 Identity = 168/268 (62.69%), Postives = 208/268 (77.61%), Query Frame = 0
Query: 25 LRIAYALMLVLSLASMWKMGSRRELLVGTEITASIPPIERNKSLFYVTTHLSPSHYEFFQKCWPSLIAKSQLYKESDFLIFATGSNASNIDWSVLNATFANATYAVQVMDNPGYQEGAMLALTEAFSKHWFDGYEWVIRVNPDVLIRNDTFLRKSMQDSSIKGIFADCLETPCATGTNCTNRLIHTDFFAIRPEAVSEQAVLEARSKQTNAERMATQAFSSIVLAGADSWVPNVGPLGLQCRVGGVASPVMHTHNQRQVHPQCLSWYD 292
L+I ++L+ SL + + R+ ++ E T+SI +ERNKSLFYVTTHLSPSHY++ +KCWPSL+AKSQ Y++SDF+IF T SN S IDW+V+NATFA V V+DNPGYQEGAMLA+TEA+ HWFDGYEWVIRVNPDVLIRNDTFL + M+D I+GIFADCL+ PC TG NC++RLIHTDFFAIRP+AVS +A+L+A K+ AE MA +AFSSIV G DSWVPN GP CR+ G SPV+H H + + +PQCLSWYD
Sbjct: 27 LKILIVMLLLASLTPLHDVMMRQLVM---ETTSSIHMVERNKSLFYVTTHLSPSHYQYLEKCWPSLLAKSQAYRQSDFVIFITKSNGSMIDWNVINATFAGTKVTVHVVDNPGYQEGAMLAMTEAYRNHWFDGYEWVIRVNPDVLIRNDTFLLEGMRDPGIEGIFADCLDKPCPTGKNCSDRLIHTDFFAIRPDAVSLEAILDADEKEPGAEPMARRAFSSIVWNGRDSWVPNAGPHMGHCRIAGAMSPVIHPHEESEGYPQCLSWYD 291
BLAST of EWM21250.1 vs. NCBI_GenBank
Match: gi|585110853|gb|EWM28451.1| (hypothetical protein Naga_100627g3 [Nannochloropsis gaditana]) HSP 1 Score: 307.76 bits (787), Expect = 1.385e-101 Identity = 143/243 (58.85%), Postives = 178/243 (73.25%), Query Frame = 0
Query: 50 LVGTEITASIPPIERNKSLFYVTTHLSPSHYEFFQKCWPSLIAKSQLYKESDFLIFATGSNASNIDWSVLNATFANATYAVQVMDNPGYQEGAMLALTEAFSKHWFDGYEWVIRVNPDVLIRNDTFLRKSMQDSSIKGIFADCLETPCATGTNCTNRLIHTDFFAIRPEAVSEQAVLEARSKQTNAERMATQAFSSIVLAGADSWVPNVGPLGLQCRVGGVASPVMHTHNQRQVHPQCLSWYD 292
L+ + T +IP +R KSL +VTTHLS +HY FF+KCWPSL+AK +Y++SDFL+ T S + +W LNATFAN Y QV+ NPGY +GA+LALT+ + +WFD YEWVIRVNPDVLIRND+FL + M D+ I+G+FADC C TG +C++ IHTDFFAIRPEAVS Q V+EA + +AE MATQAFS IV AG DSWVP GP CR+ G ASPV+HT+ R V+P CLSWYD
Sbjct: 42 LMASLNTVNIP--QRKKSLIFVTTHLSETHYTFFEKCWPSLLAKGDIYRQSDFLVLITLSEGTEPNWEFLNATFANTNYTAQVVKNPGYHQGAVLALTKGYLNNWFDDYEWVIRVNPDVLIRNDSFLFERMDDAKIQGVFADCFNRDCPTGNHCSSAKIHTDFFAIRPEAVSLQDVMEANKAKIHAELMATQAFSGIVNAGTDSWVPGAGPHNGNCRIRGEASPVIHTNVIRNVYPACLSWYD 282
BLAST of EWM21250.1 vs. NCBI_GenBank
Match: gi|1129203241|gb|OLQ05908.1| (hypothetical protein AK812_SmicGene10863 [Symbiodinium microadriaticum]) HSP 1 Score: 127.872 bits (320), Expect = 1.053e-31 Identity = 76/214 (35.51%), Postives = 117/214 (54.67%), Query Frame = 0
Query: 70 YVTTHLSPSHYEFFQKCWPSLIAKSQLYKESDFLIFATGSNASNIDWSVLNATFANATYAVQVMDNPGYQEGAMLALTEAFS-----KHWFDGYEWVIRVNPDVLIRNDTFLRKSMQDSSIKGIFADCLETPCATGTNCTNRLIHTDFFAIRPEAVSEQAVLEARSKQTNAERMATQAFSSIVLAGADSWVPNVGPLGLQCRVGGVASPVMHTH 278
++TTH S H ++ CW + L +++D +++ +G NI S L A F V+ NPG+QEGA+ A+ + F + WF+GY+WVIR+NPDVLI +D +L ++M D+S+ GIF C+ R +HTDFFA+RP+A+ V T+AE+ A SI+ + +W+ N C + GV SPV+H+H
Sbjct: 46 FMTTHWSDHHKQYL-PCWERAVQHLSLLQDADLILYTSG----NISSSEL-ARFHFRNITVRKYINPGWQEGAVQAVQDGFGAKGYQEKWFEGYDWVIRLNPDVLIMDDKWLLETMGDASVDGIFGQCM-----------GRQLHTDFFAVRPQAMDHTIV--DGCPPTSAEKHFQCAAKSILESNRYAWIKNYK--NAVCHIVGVNSPVVHSH 238
BLAST of EWM21250.1 vs. NCBI_GenBank
Match: gi|1129184889|gb|OLP91373.1| (hypothetical protein AK812_SmicGene26930 [Symbiodinium microadriaticum]) HSP 1 Score: 123.25 bits (308), Expect = 7.385e-28 Identity = 75/217 (34.56%), Postives = 117/217 (53.92%), Query Frame = 0
Query: 70 YVTTHLSPSHYEFFQKCWPSLIAKSQLYKESDFLIFATGSNASNIDWSVLNATFANATYAVQVMDNPGYQEGAMLALTEAF-----SKHWFDGYEWVIRVNPDVLIRNDTFLRKSMQDSSIKGIFADCLETPCATGTNCTNRLIHTDFFAIRPEAVSEQAVLEARSKQTNAERMATQAFSSIV--LAGADSWVPNVGPLGLQCRVGGVASPVMHTHN 279
++TTH S H F CW + + + L + +D +++ T +N SN D L F N + V+ G+Q GAM A+ +AF ++ WFDGY+WV+R+NPDVLI +D +LR++M+++S+ GIF + C IHTDFFA+RP+AV R + A R A + F +V + + + G QC + G +SP++H H
Sbjct: 52 FMTTHWSKQHQSFL-PCWQTAVQQLPLLQNADLILY-TSANLSNTDLEPLR--FRN--FFVKHCGARGHQNGAMQAVIDAFGPKGHTEKWFDGYDWVVRLNPDVLILHDQWLRETMENASVDGIFGE-----------CKGGQIHTDFFAVRPQAVD-----YTRIEVCQAWRHAEEHFRCVVQSILKSRRYQMVKGGQSTQCHIVGASSPLVHNHK 246
BLAST of EWM21250.1 vs. NCBI_GenBank
Match: gi|357290923|gb|AET73523.1| (hypothetical protein EMVG_00237 [Emiliania huxleyi virus PS401]) HSP 1 Score: 86.2705 bits (212), Expect = 5.616e-16 Identity = 62/234 (26.50%), Postives = 102/234 (43.59%), Query Frame = 0
Query: 68 LFYVTTHLSPSHYEFFQKCWPSLIAKSQLYKESDFLIFATGSNASNIDWSVLNATFANAT---YAVQVMDNPGYQEGAMLALTEAFSKHWFDGYEWVIRVNPDVLIRNDTFLRKSMQDSSIKGIFADC-------------------LETPCATGTNCTNRLIHTDFFAIRPEAVSEQAVLEARSKQTNAERMATQAFSSIVLAGADSWVPNVGPLGLQCRVGGVASPVMHTHN 279
L YVTTHL H +F + CWP + + + + A S ++D + N T + + ++ G QEGA+ A+ +A ++ F GY+WV+R+NPDV++ + LR ++ + + + C + P + CT+RL +DF+A R L AE T+ F V G D W+ + + +CR+ S V H HN
Sbjct: 59 LLYVTTHLPHVHVQFLRLCWPRVFLEFTRFA----FVHAHISVTRHVDANRSNQTRLPPLAFPHTLSEINISGKQEGAIQAMYDASARRLFAGYDWVVRLNPDVIVLDPMELRGLFRNRGVDVVLSSCGIRNRYYGWKWVKKMTGVSMPRPDVCTSRCTHRLAMSDFYAFR-----GSLNLSKTPSAGIAEDDVTELFKPFVAVGRDIWLCSYSYVVSKCRIA--TSSVRHMHN 281
BLAST of EWM21250.1 vs. NCBI_GenBank
Match: gi|551599374|ref|XP_005781532.1| (hypothetical protein EMIHUDRAFT_253973, partial [Emiliania huxleyi CCMP1516] >gi|485634321|gb|EOD29103.1| hypothetical protein EMIHUDRAFT_253973, partial [Emiliania huxleyi CCMP1516]) HSP 1 Score: 71.633 bits (174), Expect = 1.659e-10 Identity = 67/259 (25.87%), Postives = 102/259 (39.38%), Query Frame = 0
Query: 56 TASIPPIERNKSLFYVTTHLSPSHYEFFQKCWPSLIAKSQLYKESDFLIF------------ATGSNASNI------DWSVLNATFANATYAVQVMD-NPGYQEGAMLALTEAFSKHWFDGYEWVIRVNPDVLIRNDTFLRKSMQD--SSIKGIFADCLETPCATGTNCTNRLIHTDFFAIRPEAVSEQAVLEARSKQTNAERMATQAFSSIVL------AGADSWVPNVGPLGLQCRVGGVASPVMHTHN--QRQVHP 285
AS PP L ++TT + H + Q CWP + ++L +D L++ A G + I W N ++ NPG+Q GA+ L A + W GYEWV+R NPDVL + L M D SS+ + + T ++TD A R +A++ RS + R +A +++ L GA W P + + G V H+H +R V P
Sbjct: 3 AASAPPA---TVLVFLTTACAKCHLVYLQSCWPRALGATRLLAAADVLLYVGCLASDRTRFKAPGDGETQIAEPRASPWVDALRRLPNRNVSLAWTRWNPGHQAGAIAPLLVAAREAWLGGYEWVVRANPDVLFLDPAPLAARMADARSSLVAWVCRLPNSYPKWSSIPTEYFLNTDVLAARVDAINHSGWRGGRSSRPEFVRDIAEARTTLALDAATRSGGATLWAAGSQPNLCRAQSHG----VFHSHQACRRSVQP 254
BLAST of EWM21250.1 vs. NCBI_GenBank
Match: gi|551625753|ref|XP_005792983.1| (hypothetical protein EMIHUDRAFT_222663 [Emiliania huxleyi CCMP1516] >gi|485647392|gb|EOD40554.1| hypothetical protein EMIHUDRAFT_222663 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 70.8626 bits (172), Expect = 4.585e-10 Identity = 67/259 (25.87%), Postives = 102/259 (39.38%), Query Frame = 0
Query: 56 TASIPPIERNKSLFYVTTHLSPSHYEFFQKCWPSLIAKSQLYKESDFLIF------------ATGSNASNI------DWSVLNATFANATYAVQVMD-NPGYQEGAMLALTEAFSKHWFDGYEWVIRVNPDVLIRNDTFLRKSMQD--SSIKGIFADCLETPCATGTNCTNRLIHTDFFAIRPEAVSEQAVLEARSKQTNAERMATQAFSSIVL------AGADSWVPNVGPLGLQCRVGGVASPVMHTHN--QRQVHP 285
AS PP L ++TT + H + Q CWP + ++L +D L++ A G + I W N ++ NPG+Q GA+ L A + W GYEWV+R NPDVL + L M D SS+ + + T ++TD A R +A++ RS + R +A +++ L GA W P + + G V H+H +R V P
Sbjct: 111 AASAPPA---TVLVFLTTACAKCHLVYLQSCWPRALGATRLLAAADVLLYVGCLASDRTRFKAPGDGETQIAEPRASPWVDALRRLPNRNVSLAWTRWNPGHQAGAIAPLLVAAREAWLGGYEWVVRANPDVLFLDPAPLAARMADARSSLVAWVCRLPNSYPKWSSIPTEYFLNTDVLAARVDAINHSGWRGGRSSRPEFVRDIAEARTTLALDAATRSGGATLWAAGSQPNLCRAQSHG----VFHSHQACRRSVQP 362
BLAST of EWM21250.1 vs. NCBI_GenBank
Match: gi|1129203246|gb|OLQ05913.1| (hypothetical protein AK812_SmicGene10844 [Symbiodinium microadriaticum]) HSP 1 Score: 60.8474 bits (146), Expect = 7.886e-8 Identity = 35/105 (33.33%), Postives = 56/105 (53.33%), Query Frame = 0
Query: 69 FYVTTHLSPSHYEFFQKCWPSLIAKSQLYKESDFLIFATGSNASNIDWSVLNATFANATYAVQVMDNPGYQEGAMLALTEAFS-----KHWFDGYEWVIRVNPDV 168
++TTH S H +F CW + + L + +D +++ +G N + D L F N T ++ Y+EGA+ A +AF + WFD Y+WV+R+NPDV
Sbjct: 55 IFMTTHWSTLHQQFM-PCWETARQQLSLVRNADLILYTSG-NIGSKDLEKLG--FGNLT--IKHYKQAKYEEGAIQATIDAFGSKGQQEKWFDRYDWVVRLNPDV 153 The following BLAST results are available for this feature:
BLAST of EWM21250.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 9
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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