EWM21254.1, cds9419 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21254.1 vs. NCBI_GenBank
Match: gi|585101390|gb|EWM21254.1| (hypothetical protein Naga_100908g2 [Nannochloropsis gaditana]) HSP 1 Score: 691.419 bits (1783), Expect = 0.000e+0 Identity = 346/346 (100.00%), Postives = 346/346 (100.00%), Query Frame = 0
Query: 1 MRQAQRREAELESTTADLTASLAAKQREIETLKASFHALGDSREIVDMESQRLQQELEASRNALEMERQHVVSLQRELRAQQHELSAATAAWREEKEAQESRWQKGVREREGLAQALAEERQKREELERAGAQGGAQGGRVREEMEVRVQALSEQLVRKQEALDAALSNVYAAEARFKASEARVKALESQLAAADYDVESPADDVGPGAVRSRGHVNAIHKPYPSSSSSSSFSLLPPAAAGRRVALAPLKPLSRLPFLRPYPAAADVADGVDKVFLASMHYLRTFPWVRLSLLAYLFLLHIYVFSVVGWQAGRIETIHSDTGGSFLEPSNRAFVKDVASTNGGNGV 346
MRQAQRREAELESTTADLTASLAAKQREIETLKASFHALGDSREIVDMESQRLQQELEASRNALEMERQHVVSLQRELRAQQHELSAATAAWREEKEAQESRWQKGVREREGLAQALAEERQKREELERAGAQGGAQGGRVREEMEVRVQALSEQLVRKQEALDAALSNVYAAEARFKASEARVKALESQLAAADYDVESPADDVGPGAVRSRGHVNAIHKPYPSSSSSSSFSLLPPAAAGRRVALAPLKPLSRLPFLRPYPAAADVADGVDKVFLASMHYLRTFPWVRLSLLAYLFLLHIYVFSVVGWQAGRIETIHSDTGGSFLEPSNRAFVKDVASTNGGNGV
Sbjct: 1 MRQAQRREAELESTTADLTASLAAKQREIETLKASFHALGDSREIVDMESQRLQQELEASRNALEMERQHVVSLQRELRAQQHELSAATAAWREEKEAQESRWQKGVREREGLAQALAEERQKREELERAGAQGGAQGGRVREEMEVRVQALSEQLVRKQEALDAALSNVYAAEARFKASEARVKALESQLAAADYDVESPADDVGPGAVRSRGHVNAIHKPYPSSSSSSSFSLLPPAAAGRRVALAPLKPLSRLPFLRPYPAAADVADGVDKVFLASMHYLRTFPWVRLSLLAYLFLLHIYVFSVVGWQAGRIETIHSDTGGSFLEPSNRAFVKDVASTNGGNGV 346
BLAST of EWM21254.1 vs. NCBI_GenBank
Match: gi|553195688|ref|XP_005856184.1| (hypothetical protein NGA_0319300 [Nannochloropsis gaditana CCMP526] >gi|422292862|gb|EKU20164.1| hypothetical protein NGA_0319300 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 110.923 bits (276), Expect = 4.286e-27 Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0
Query: 145 MEVRVQALSEQLVRKQEALDAALSNVYAAEARFKASEARVKALESQLAAADYDVESPA 202
MEVRVQALSEQLVRKQEALDAALSNVYAAEARFKASEARVKALESQLAAADYDVESPA
Sbjct: 1 MEVRVQALSEQLVRKQEALDAALSNVYAAEARFKASEARVKALESQLAAADYDVESPA 58
BLAST of EWM21254.1 vs. NCBI_GenBank
Match: gi|955167831|emb|CUG89192.1| (transmembrane protein, putative [Bodo saltans]) HSP 1 Score: 64.3142 bits (155), Expect = 1.013e-7 Identity = 61/196 (31.12%), Postives = 93/196 (47.45%), Query Frame = 0
Query: 126 ELERAGAQGGAQGGRVREE---MEVRVQALSEQLVRKQEALDAALSNVYAAEARFKASEARVKALESQLAAADYDVESPADDVGPGAVRSRGHVNAIHKPYPSSSSSSSFSLLPPAAAGRRVALAPLKPLSRLPFLRPYPA-------AADVADGVDKVFLASMHYLRTFPWVRLSLLAYLFLLHIYVFSVVGWQA 311
EL+ +Q AQ G ++ +E+RV+ L+E L+ KQ AL+A S RF+ S+ R++ ES AA GPGA RG S S S+ +L + +A + L R F+R A A+ A G+DKV L + +LR +R+ L+AY+ +LH++VF V+ A
Sbjct: 348 ELKAKKSQSSAQSGGGHQDALGLELRVRELAEMLMEKQAALEAKRSEADQWRTRFEVSQQRLREAESVHAAMSS---------GPGA---RG----------SQQSRSARALYVDEESNLLLA-GDMGELGRTKFIRNLSAKGGWGEQVANAAQGLDKVSLKTGSFLRRNALLRVMLVAYVMMLHVWVFLVLTMSA 520 The following BLAST results are available for this feature:
BLAST of EWM21254.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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