EWM21264.1, cds9409 (CDS) Nannochloropsis gaditana

Overview
NameEWM21264.1
Unique Namecds9409
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037253.1:291530..292468 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21264.1
Productran gtpase-activating protein 1
Orig transcript idgnl|cribi|Naga_100538g3.4542.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:291530..292468 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR003590Leu-rich_rpt_RNase_inh_sub-typ
Homology
BLAST of EWM21264.1 vs. NCBI_GenBank
Match: gi|585101416|gb|EWM21264.1| (ran gtpase-activating protein 1 [Nannochloropsis gaditana])

HSP 1 Score: 587.8 bits (1514), Expect = 0.000e+0
Identity = 312/312 (100.00%), Postives = 312/312 (100.00%), Query Frame = 0
Query:    1 MSGDEGAEALASLLPHCPRLEDLRFSGTRAGRKGSAAFVLVLWEATRRPGESKTEEGKEGERIRGLRKVDLADNLFGGGDGKVAQRLAEALGEQRKLESLNLRDCGLEDEGVRVLLQILSRKCRYLKRLDLSGNDLTADVGGALGRAVGRWKDLTHLHLEENELGNAGAKKLGRYLSGSLKLKHLKLSQNEVKRSGAVAVVQALVGREGGGEGWGEAVGKKTRVELESNEIGEEGRAELMELVTAKGYADMLGPMEEDEEGEEEEEEEEEEESEESEEEEEESEEEEEEEEEEEEEEGGVEELIKGVENVAI 312
            MSGDEGAEALASLLPHCPRLEDLRFSGTRAGRKGSAAFVLVLWEATRRPGESKTEEGKEGERIRGLRKVDLADNLFGGGDGKVAQRLAEALGEQRKLESLNLRDCGLEDEGVRVLLQILSRKCRYLKRLDLSGNDLTADVGGALGRAVGRWKDLTHLHLEENELGNAGAKKLGRYLSGSLKLKHLKLSQNEVKRSGAVAVVQALVGREGGGEGWGEAVGKKTRVELESNEIGEEGRAELMELVTAKGYADMLGPMEEDEEGEEEEEEEEEEESEESEEEEEESEEEEEEEEEEEEEEGGVEELIKGVENVAI
Sbjct:    1 MSGDEGAEALASLLPHCPRLEDLRFSGTRAGRKGSAAFVLVLWEATRRPGESKTEEGKEGERIRGLRKVDLADNLFGGGDGKVAQRLAEALGEQRKLESLNLRDCGLEDEGVRVLLQILSRKCRYLKRLDLSGNDLTADVGGALGRAVGRWKDLTHLHLEENELGNAGAKKLGRYLSGSLKLKHLKLSQNEVKRSGAVAVVQALVGREGGGEGWGEAVGKKTRVELESNEIGEEGRAELMELVTAKGYADMLGPMEEDEEGEEEEEEEEEEESEESEEEEEESEEEEEEEEEEEEEEGGVEELIKGVENVAI 312          
BLAST of EWM21264.1 vs. NCBI_GenBank
Match: gi|1173947465|gb|OQR95756.1| (hypothetical protein THRCLA_07598 [Thraustotheca clavata])

HSP 1 Score: 138.658 bits (348), Expect = 7.426e-33
Identity = 99/256 (38.67%), Postives = 134/256 (52.34%), Query Frame = 0
Query:    1 MSGDEGAEALASLLPHCPRLEDLRFSGTRAGRKGSAAFVLVLWEATRRPGESKTEEGKEGERIRGLRKVDLADNLFGGGDGKVAQRLAEALGEQRKLESLNLRDCGLEDEGVRVLLQ-ILSRKCRYLKRLDLSGNDLTADVGGALGRAVGRWKDLTHLHLEENELGNAGAKKLGRYLSGSLKLKHLKLSQ---NEVKRSGAVAVVQALVGREGGGEGWGEAVGKKTRVELESNEIGEEGRAELMELVTAKGYADML 252
            MSGD GA+ALA+L+PHCP LEDLRFS TRA R+G   F   L                    ++ L+ VDL+DN FG     V   LA+ LG Q KLE LNLRD  + D+G+  + + +L  K   ++ LD+SGNDLT     ALG+ V     L  L +EENE+G+ GA+KL R+L     +  L++ Q   NE+   GA  +  AL                  RVEL+ N + EE   ++ EL TA   + +L
Sbjct:  160 MSGDGGAKALATLIPHCPELEDLRFSTTRAQREGCRVFANAL------------------SSLKNLKHVDLSDNTFGEQGATV---LAKGLGLQSKLEVLNLRDASIGDDGLIAISKALLKNKVTGIRVLDVSGNDLTEASMEALGQLVAALPQLEELRIEENEIGSDGAQKLARFLHKKNVISKLRVFQSNTNEISSVGAWWIANALANNSA-----------LERVELDGNMLTEETIEKIKELFTAHKKSSVL 383          

HSP 2 Score: 79.337 bits (194), Expect = 1.179e-12
Identity = 80/258 (31.01%), Postives = 125/258 (48.45%), Query Frame = 0
Query:    1 MSGDEGAEALASLLPHCPRLEDLRFSGTRAGRKGSAAFVLVLWEATRRPGESKTEEGKEGERIRGLRKVDLADNLFGGGDGKVAQRLAEALGEQRKLESLNLRDCGLEDEGVRVLLQILSRKCRYLKRLDLSGNDL-----TADVGGALGRAVGRWKDLTHLHLEENELGNAGAKKLGRYLSGSL-KLKHLKLSQNEVKRSGAVAVVQALVGREGGGEGWGEAVGKKTRVELESNEIGEEGRAELMELVTAKGYADML 252
            MSG +G  A+AS+L   P L  LR++  RAG K S        E  +   ++ T+          L ++DL+D  F   D + AQ LA+A+ +Q  L+ L LRD  L  +G  V++  +S     L  LDLSGN+L     +  V G    ++    DLT L L+ENE  + G       +  SL KL+ L L  NE+  SGAV+++++ +  +   +           + L+SN I  +G   + EL+   G + +L
Sbjct:  588 MSGHDGCIAIASMLSGLPHLTKLRYASARAGIKASC-------ELAKSIAKNLTK----------LVELDLSDCSF---DEEGAQALADAIRKQPNLKVLKLRDASLGPDGAMVVVNAISN--LRLTSLDLSGNELEDEGMSNIVSGP--HSLEAQMDLTVLRLDENECTSKGLAVFADEIRASLPKLEELSLCGNEITASGAVSLIKSGLANKSALQ----------HLYLDSNMISTKGIEMMNELLKKIGKSHVL 811          
BLAST of EWM21264.1 vs. NCBI_GenBank
Match: gi|1173934483|gb|OQR85816.1| (hypothetical protein ACHHYP_11335 [Achlya hypogyna])

HSP 1 Score: 137.117 bits (344), Expect = 2.429e-32
Identity = 95/243 (39.09%), Postives = 128/243 (52.67%), Query Frame = 0
Query:    1 MSGDEGAEALASLLPHCPRLEDLRFSGTRAGRKGSAAFVLVLWEATRRPGESKTEEGKEGERIRGLRKVDLADNLFGGGDGKVAQRLAEALGEQRKLESLNLRDCGLEDEG-VRVLLQILSRKCRYLKRLDLSGNDLTADVGGALGRAVGRWKDLTHLHLEENELGNAGAKKLGRYLSGSLKLKHLKLSQ---NEVKRSGAVAVVQALVGREGGGEGWGEAVGKKTRVELESNEIGEEGRAEL 239
            MSGD GA+ALA+LLPHCP LEDLRFS TR+ R+G   F   L                    +R L++VDL+DN FG     V   LA  LG Q +LE LNLRD  + D+G + +   +++     ++ LD+SGNDLT     ALGR V     L  L +EENE+G+AGA  L R L  +   +HL++ Q   NE+   G   +  ALV +   G           RVEL+ N   ++  A+L
Sbjct:  182 MSGDGGAKALATLLPHCPELEDLRFSTTRSQREGCRVFAAALGS------------------LRNLKRVDLSDNTFGDEGATV---LAAGLGLQAQLEVLNLRDASIGDDGFIAIADALVANGVNGIRVLDVSGNDLTEASMAALGRLVKALPLLEELRIEENEIGSAGATTLARALHAASVGRHLRVFQSNTNEIASVGGAYLAAALVAKPALG-----------RVELDGNMFSDDAVAKL 392          

HSP 2 Score: 101.293 bits (251), Expect = 3.950e-20
Identity = 88/262 (33.59%), Postives = 133/262 (50.76%), Query Frame = 0
Query:    1 MSGDEGAEALASLLPHCPRLEDLRFSGTRAGRKGSAAFVLVLWEATRRPGESKTEEGKEGERIRGLRKVDLADNLFGGGDGKVAQRLAEALGEQRKLESLNLRDCGLEDEGVRVLLQILSRKCRYLKRLDLSGNDLTADVGGALG---RAVGRWKDLTHLHLEENELGNAGAKKLGRYLSGSL-KLKHLKLSQNEVKRSGAVAVVQALVGREGGGEGWGEAVGKKTRVELESNEIGEEGRAELMELVTAKGYADMLGPMEED 258
            MSG +G  A+A++LP CP L+ LR++  RAG + S A  + +                 G  +  L  +DL+D  F    G VA  L  AL +QRKL+ L LRD  L  EG   +++ L      L  LDLSGN+L  +  G L     ++    +L  L L+ENE  +AG       +   L +L+ L L  NE+  SGA+++V+   G +   +         TR+ L++N I   G A+L EL++A G + +LGPM+E+
Sbjct:  607 MSGHDGCLAIANMLPGCPHLKTLRYASARAGIEASTALAVAI-----------------GSHLTELESLDLSDCSFDDA-GVVA--LTAALRKQRKLKVLKLRDASLGPEGAVAVVKALDGV--RLTSLDLSGNELEDEGMGNLANGPHSLEAQTELKVLRLDENECTSAGLAVFADEIRACLLQLEELSLCGNEITASGAISLVK--TGLQTKAQ--------LTRLHLDANMISAVGLAKLKELLSAVGKSHVLGPMDEN 836          
BLAST of EWM21264.1 vs. NCBI_GenBank
Match: gi|953494149|emb|CEG43743.1| (Ran GTPase-activating protein [Plasmopara halstedii])

HSP 1 Score: 133.265 bits (334), Expect = 5.498e-32
Identity = 97/268 (36.19%), Postives = 151/268 (56.34%), Query Frame = 0
Query:    1 MSGDEGAEALASLLPHCPRLEDLRFSGTRAGRKGSAAFVLVLWEATRRPGESKTEEGKEGERIRGLRKVDLADNLFGGGDGKVAQRLAEALGEQRKLESLNLRDCGLEDEGVRVLLQIL--SRKCRYLKRLDLSGNDLTADVGGALGRAVGRWKDLTHLHLEENELGNAGAKKLGRYLS-GSLKLKHLKLSQNEVKRSGAVAVVQALVGREGGGEGWGEAVGKKTRVELESNEIGEEGRAELMELVTAKGYADMLGPMEEDEEGEEEE 265
            MSGD GA ALA LLP  P L+DLRFS TRA R+GS  F   L                    ++ L K+DL+DN F    GK    +A A+     L  +NLRD  +ED+G+  +++ +  +     L  LD+SGNDLTAD   +LG+ +     L  L +EENE+G+ GAK + + ++ GS  L+ +  + NE+  SGA+A+V+A+V ++              +++++ N+I  +G A + EL+ +K  +DMLG M++++E EE+E
Sbjct:  180 MSGDGGAIALAKLLPMSPALKDLRFSATRAQREGSLTFAQAL------------------NSLQKLEKLDLSDNTFKTSGGKA---IAAAVKNMPNLREINLRDAAIEDDGLVAIVEAMVEAGAVDTLAELDVSGNDLTADSMQSLGQLLCVSTALRVLQMEENEIGSKGAKVIAKAITTGSPLLERIVANVNEIGASGALALVKAVVEKKAF-----------VKLDMDGNQISADGVANIEELLESKNRSDMLGSMDDNDEDEEDE 415          
BLAST of EWM21264.1 vs. NCBI_GenBank
Match: gi|1214711689|gb|OWZ22681.1| (hypothetical protein PHMEG_0002561 [Phytophthora megakarya])

HSP 1 Score: 128.257 bits (321), Expect = 3.565e-30
Identity = 109/285 (38.25%), Postives = 159/285 (55.79%), Query Frame = 0
Query:    1 MSGDEGAEALASLLPHCPRLEDLRFSGTRAGRKGSAAFVLVLWEATRRPGESKTEEGKEGERIRGLRKVDLADNLFGGGDGKVAQRLAEALGEQRKLESLNLRDCGLEDEGVRVLLQILSR--KCRYLKRLDLSGNDLTADVGGALGRAVGRWKDLTHLHLEENELGNAGAKKLGRYLS-GSLKLKHLKLSQNEVKRSGAVAVVQALVGREGGGEGWGEAVGKKTRVELES--NEIGEEGRAELMELVTAKGYADMLGPMEEDEEGEEEEEEEEEEESEESEEEE 280
            MSGD GA ALA LLP  P L+DLRFS TRA R+GS AF   L                    ++ L K+DL+DN F    G   + +A A+     L  +NLRD  +ED+G+  + Q L      + L  LD+SGNDLT +   ALG  +     L  L +EENE+G+ GAK + + L  GS  L+ +  + NE+  SGA+A+V+A+V              KKT V+L+   N+I  +G A +  L+ +KG +D+LG +E++++ EEEEE+++EEE E +  +E
Sbjct:  179 MSGDGGAIALAKLLPLSPALKDLRFSATRAQREGSLAFATALAS------------------LKKLEKLDLSDNTFKTKGG---EAIAAAVKNMPNLVEINLRDAAIEDDGLVAIAQALREGGPAKGLTALDVSGNDLTPESMSALGHMLRVSSALRVLQMEENEIGSKGAKAIAKALKVGSPVLEKVVANVNEIGASGALALVKAVVE-------------KKTFVKLDIDGNQISADGVASIKSLLESKGKSDVLGSLEDNDDEEEEEEDDDEEEEETTSVDE 429          
BLAST of EWM21264.1 vs. NCBI_GenBank
Match: gi|669149696|ref|XP_008610410.1| (hypothetical protein SDRG_06409 [Saprolegnia diclina VS20] >gi|530738062|gb|EQC36304.1| hypothetical protein SDRG_06409 [Saprolegnia diclina VS20])

HSP 1 Score: 127.872 bits (320), Expect = 3.290e-29
Identity = 90/243 (37.04%), Postives = 128/243 (52.67%), Query Frame = 0
Query:    1 MSGDEGAEALASLLPHCPRLEDLRFSGTRAGRKGSAAFVLVLWEATRRPGESKTEEGKEGERIRGLRKVDLADNLFGGGDGKVAQRLAEALGEQRKLESLNLRDCGLEDEGVRVLLQ-ILSRKCRYLKRLDLSGNDLTADVGGALGRAVGRWKDLTHLHLEENELGNAGAKKLGRYLSGSLKLKHLKLSQNEVKRSGAVAVVQALVGREGGGEGWGEAVGKK---TRVELESNEIGEEGRAEL 239
            MSGD GA+ALA+LLP C  LEDLRFS TRA R+G   F   L                    +R L++VDL+DN F G +G +   LA+ LG Q +LE LNLRD  + D+G+  + + +++ K   ++ LD+SGNDLT     AL R V     L  L +EENE+ ++GA+ L R L      KHL++ Q+      +V           GG    +A+  K   TRVEL+ N   ++   ++
Sbjct:  163 MSGDGGAKALATLLPACQHLEDLRFSTTRAQREGCRVFAAALGS------------------LRNLKRVDLSDNTF-GAEGAIV--LAKGLGLQSQLEVLNLRDASIGDDGLIAISEALITNKVAGIRILDVSGNDLTEASMAALARLVQALPQLEELRIEENEITSSGAQLLARVLQKKTVAKHLRVFQSNTNELCSV-----------GGWHLAKALAHKAQLTRVELDGNMFSDDALTKI 373          

HSP 2 Score: 87.4261 bits (215), Expect = 2.135e-15
Identity = 81/262 (30.92%), Postives = 120/262 (45.80%), Query Frame = 0
Query:    1 MSGDEGAEALASLLPHCPRLEDLRFSGTRAGRKGSAAFVLVLWEATRRPGESKTEEGKEGERIRGLRKVDLADNLFGGGDGKVAQRLAEALGEQRKLESLNLRDCGLEDEGVRVLLQILSRKCRYLKRLDLSGNDLTADVGGALG---RAVGRWKDLTHLHLEENELGNAGAKKLGRYLSGSL-KLKHLKLSQNEVKRSGAVAVVQALVGREGGGEGWGEAVGKKTRVELESNEIGEEGRAELMELVTAKGYADMLGPMEED 258
            MSG +G  A+A +LP CP L   R++  RAG   S        E  R    + ++          L  +DL+D  F   D    + L  AL +Q KL  L LRD  L  +G   +++ L      L  LDLSGN+L  +    L     ++    DL  L L+ENE  + G       +  SL KL+ L L  NE+  SGA+++V+          G       K R+ L++N I   G  +L +L+ + G   +LGPM+E+
Sbjct:  592 MSGHDGCLAIAKMLPGCPHLTTFRYASARAGLDAS-------QELARSIAANLSQ----------LESLDLSDCSF---DDDGVKALTAALRKQTKLRVLKLRDASLGPDGAVAVVRALDHV--RLTSLDLSGNELEDEGMSNLANGPHSLEAQSDLVVLRLDENECTSKGLAVFADEIRASLTKLEELSLCGNEITASGAISLVKT---------GLATKSHLK-RLHLDANMISSAGLTKLNDLLASVGKVHVLGPMDEN 821          
BLAST of EWM21264.1 vs. NCBI_GenBank
Match: gi|299117112|emb|CBN73883.1| (Ran-GTPase activating protein [Ectocarpus siliculosus])

HSP 1 Score: 125.946 bits (315), Expect = 9.652e-29
Identity = 87/205 (42.44%), Postives = 119/205 (58.05%), Query Frame = 0
Query:    1 MSGDEGAEALASLLPHCPRLEDLRFSGTRAGRKGSAAFVLVLWEATRRPGESKTEEGKEGERIRGLRKVDLADNLFGGGDGKVAQRLAEALGEQRKLESLNLRDCGLEDEGVRVLLQILSRKCRYLKRLDLSGNDLTADVGGALGRAVGR-WKDLTHLHLEENELGNAGAKKLGRYLSGSLKLKHLKLSQNEVKRSGAVAVVQAL 204
            MSGD GA+ALA +LP CP L D RFSGTR+GR+GSAA V  L E    P  S             L ++DLADN  G   G+V   LAEAL  Q  L  +NL +C L DEG   + + LS     ++ L+ S N+LTA+   A+     R    L +L LE NE+G+AGAK + + L+ +  ++ ++LS NE+  SGA+AV ++L
Sbjct:  315 MSGDLGAKALAQVLPKCPNLSDFRFSGTRSGREGSAAVVQALLEC---PAASAGL----------LERLDLADNTLGEEGGRV---LAEALATQPSLTYVNLSECDLGDEGAAAVAKALSGTAPGVRELEFSYNELTAEGAAAVAACAERKSASLEYLGLEGNEMGSAGAKSIAKALAPARVIRKVQLSTNEIGTSGALAVARSL 503          
BLAST of EWM21264.1 vs. NCBI_GenBank
Match: gi|970658961|gb|KUF96663.1| (hypothetical protein AM588_10006275 [Phytophthora nicotianae])

HSP 1 Score: 125.946 bits (315), Expect = 1.557e-28
Identity = 91/258 (35.27%), Postives = 135/258 (52.33%), Query Frame = 0
Query:    1 MSGDEGAEALASLLPHCPRLEDLRFSGTRAGRKGSAAFVLVLWEATRRPGESKTEEGKEGERIRGLRKVDLADNLFGGGDGKVAQRLAEALGEQRKLESLNLRDCGLEDEGVRVLLQILSR--KCRYLKRLDLSGNDLTADVGGALGRAVGRWKDLTHLHLEENELGNAGAKKLGRYLS-GSLKLKHLKLSQNEVKRSGAVAVVQALVGREGGGEGWGEAVGKKTRVELESNEIGEEGRAELMELVTAKGYADMLGPM 255
            MSGD GA ALA LLP  P L+DLRFS TRA R+GS  F   L   T+                  L K+DL+DN F    G   + +A A+     L  +NLRD  +ED+G+  +   L      R +  LD+SGNDLTA    ALG+ +     L  L +EENE+G+ GAK + + L  GS  L+ +  + NE+  SGA+A+V+A+V ++              +++++ N+I   G A +  L+ +   +D+LG +
Sbjct:  497 MSGDGGAIALAKLLPLSPALKDLRFSATRAQREGSLTFAKALASLTK------------------LEKLDLSDNTFKAQGG---EAIAAAVKNMPNLVEINLRDAAIEDDGLVAIADALREGGAARGITALDVSGNDLTAASMPALGQMLRDSAALRVLQVEENEIGSKGAKAIAKSLKVGSPALEKVVANMNEIGASGALALVKAVVDKKAF-----------VKLDIDGNQISAGGVANIESLLESNNKSDVLGSL 722          

HSP 2 Score: 103.219 bits (256), Expect = 9.633e-21
Identity = 90/270 (33.33%), Postives = 135/270 (50.00%), Query Frame = 0
Query:    1 MSGDEGAEALASLLPHCPRLEDLRFSGTRAGRKGSAAFVLVLWEATRRPGESKTEEGKEGERIRGLRKVDLADNLFGGGDGKVAQRLAEALGEQRKLESLNLRDCGLEDEGVRVLLQILSRKCRYLKRLDLSGNDLTADVGGALGRAVGRWKDLTHLHLEENELGNAGAKKLGRYLSG-SLK-LKHLKLSQNEVKRSGAVAVVQALVGREGGGEGWGEAVGKKTRVELESNEIGEEGRAELMELVTAKGYADMLGPMEEDEEGEEEEEEE 268
            MSG +G  A+A++L  C +L  LR++  RAG                 P  S+         +R L+ +DL+D  F   DG  A +LAEA+ +Q  L+ L LRD  L  EGV  + + L+     L  LDLSGN+L  +   AL   +     L  L L+ENE+ + G K+    LS  SL  L+ L L  NE+   GA+AVV   V  +              RVEL++N I ++G   +   +  +G A++LG +EE+ +G+EE ++E
Sbjct:  925 MSGHDGCVAVANVLAQCKKLTLLRYASARAG-----------------PEASEEMARSVNTHLRQLKSLDLSDCSFEE-DG--ATQLAEAISKQPNLQYLKLRDASLCAEGVEKVAKALTSSNIQLVELDLSGNELADEGIAALALLLKSQSQLKVLRLDENEVTSEGLKEFVAVLSADSLPALEELSLCGNEITAKGAIAVVDTFVPTKMA----------LVRVELDTNMISDKGVEHIKASLAKQGKANILGSLEEN-DGDEESDDE 1163          
BLAST of EWM21264.1 vs. NCBI_GenBank
Match: gi|570972711|gb|ETP35503.1| (hypothetical protein F442_16347 [Phytophthora parasitica P10297])

HSP 1 Score: 125.176 bits (313), Expect = 2.972e-28
Identity = 91/258 (35.27%), Postives = 135/258 (52.33%), Query Frame = 0
Query:    1 MSGDEGAEALASLLPHCPRLEDLRFSGTRAGRKGSAAFVLVLWEATRRPGESKTEEGKEGERIRGLRKVDLADNLFGGGDGKVAQRLAEALGEQRKLESLNLRDCGLEDEGVRVLLQILSR--KCRYLKRLDLSGNDLTADVGGALGRAVGRWKDLTHLHLEENELGNAGAKKLGRYLS-GSLKLKHLKLSQNEVKRSGAVAVVQALVGREGGGEGWGEAVGKKTRVELESNEIGEEGRAELMELVTAKGYADMLGPM 255
            MSGD GA ALA LLP  P L+DLRFS TRA R+GS  F   L   T+                  L K+DL+DN F    G   + +A A+     L  +NLRD  +ED+G+  +   L      R +  LD+SGNDLTA    ALG+ +     L  L +EENE+G+ GAK + + L  GS  L+ +  + NE+  SGA+A+V+A+V ++              +++++ N+I   G A +  L+ +   +D+LG +
Sbjct:  178 MSGDGGAIALAKLLPLSPALKDLRFSATRAQREGSLTFAKALASLTK------------------LEKLDLSDNTFKAQGG---EAIAAAVKNMPNLVEINLRDAAIEDDGLVAIADALREGGAARGITALDVSGNDLTAASMPALGQMLRDSAALRVLQVEENEIGSKGAKAIAKSLKVGSPALEKVVANMNEIGASGALALVKAVVDKKAF-----------VKLDIDGNQISAGGVANIESLLESNNKSDVLGSL 403          

HSP 2 Score: 99.3673 bits (246), Expect = 1.671e-19
Identity = 89/270 (32.96%), Postives = 133/270 (49.26%), Query Frame = 0
Query:    1 MSGDEGAEALASLLPHCPRLEDLRFSGTRAGRKGSAAFVLVLWEATRRPGESKTEEGKEGERIRGLRKVDLADNLFGGGDGKVAQRLAEALGEQRKLESLNLRDCGLEDEGVRVLLQILSRKCRYLKRLDLSGNDLTADVGGALGRAVGRWKDLTHLHLEENELGNAGAKKLGRYLSG-SLK-LKHLKLSQNEVKRSGAVAVVQALVGREGGGEGWGEAVGKKTRVELESNEIGEEGRAELMELVTAKGYADMLGPMEEDEEGEEEEEEE 268
            MSG +G  A+A++L  C +L  LR++  RAG                 P  S+         +R L+ +DL+D  F   DG  A +LAEA+ +Q  L  L LRD  L  EG   + + L+     L  LDLSGN+L  +   AL   +     L  L L+ENE+ + G K+    LS  SL  L+ L L  NE+   GA+AVV   V  +              RVEL++N I ++G   +   +  +G A++LG +EE+ +G+EE ++E
Sbjct:  606 MSGHDGCVAVANVLAQCKKLTLLRYASARAG-----------------PEASEEMARSVNTHLRQLKSLDLSDCSFEE-DG--ATQLAEAISKQPNLRYLKLRDASLCAEGAEKVAKALTSSNIQLVELDLSGNELADEGIAALALLLKSQSQLKVLRLDENEVTSEGLKEFVAVLSADSLPALEELSLCGNEITAKGAIAVVDTFVPTKMA----------LVRVELDTNMISDKGVEHIKASLAKQGKANILGSLEEN-DGDEESDDE 844          
BLAST of EWM21264.1 vs. NCBI_GenBank
Match: gi|566014653|gb|ETI37564.1| (hypothetical protein F443_16512 [Phytophthora parasitica P1569] >gi|970656722|gb|KUF94700.1| RAN GTPase-activating protein 2 [Phytophthora nicotianae])

HSP 1 Score: 125.176 bits (313), Expect = 2.972e-28
Identity = 91/258 (35.27%), Postives = 135/258 (52.33%), Query Frame = 0
Query:    1 MSGDEGAEALASLLPHCPRLEDLRFSGTRAGRKGSAAFVLVLWEATRRPGESKTEEGKEGERIRGLRKVDLADNLFGGGDGKVAQRLAEALGEQRKLESLNLRDCGLEDEGVRVLLQILSR--KCRYLKRLDLSGNDLTADVGGALGRAVGRWKDLTHLHLEENELGNAGAKKLGRYLS-GSLKLKHLKLSQNEVKRSGAVAVVQALVGREGGGEGWGEAVGKKTRVELESNEIGEEGRAELMELVTAKGYADMLGPM 255
            MSGD GA ALA LLP  P L+DLRFS TRA R+GS  F   L   T+                  L K+DL+DN F    G   + +A A+     L  +NLRD  +ED+G+  +   L      R +  LD+SGNDLTA    ALG+ +     L  L +EENE+G+ GAK + + L  GS  L+ +  + NE+  SGA+A+V+A+V ++              +++++ N+I   G A +  L+ +   +D+LG +
Sbjct:  178 MSGDGGAIALAKLLPLSPALKDLRFSATRAQREGSLTFAKALASLTK------------------LEKLDLSDNTFKAQGG---EAIAAAVKNMPNLVEINLRDAAIEDDGLVAIADALREGGAARGITALDVSGNDLTAASMPALGQMLRDSAALRVLQVEENEIGSKGAKAIAKSLKVGSPALEKVVANMNEIGASGALALVKAVVDKKAF-----------VKLDIDGNQISAGGVANIESLLESNNKSDVLGSL 403          

HSP 2 Score: 101.679 bits (252), Expect = 3.323e-20
Identity = 90/270 (33.33%), Postives = 134/270 (49.63%), Query Frame = 0
Query:    1 MSGDEGAEALASLLPHCPRLEDLRFSGTRAGRKGSAAFVLVLWEATRRPGESKTEEGKEGERIRGLRKVDLADNLFGGGDGKVAQRLAEALGEQRKLESLNLRDCGLEDEGVRVLLQILSRKCRYLKRLDLSGNDLTADVGGALGRAVGRWKDLTHLHLEENELGNAGAKKLGRYLSG-SLK-LKHLKLSQNEVKRSGAVAVVQALVGREGGGEGWGEAVGKKTRVELESNEIGEEGRAELMELVTAKGYADMLGPMEEDEEGEEEEEEE 268
            MSG +G  A+A++L  C +L  LR++  RAG                 P  S+         +R L+ +DL+D  F   DG  A +LAEA+ +Q  L  L LRD  L  EGV  + + L+     L  LDLSGN+L  +   AL   +     L  L L+ENE+ + G K+    LS  SL  L+ L L  NE+   GA+AVV   V  +              RVEL++N I ++G   +   +  +G A++LG +EE+ +G+EE ++E
Sbjct:  606 MSGHDGCVAVANVLAQCKKLTLLRYASARAG-----------------PEASEEMARSVNTHLRQLKSLDLSDCSFEE-DG--ATQLAEAISKQPNLRYLKLRDASLCAEGVEKVAKALTSSNIQLVELDLSGNELADEGIAALALLLKSQSQLKVLRLDENEVTSEGLKEFVAVLSADSLPALEELSLCGNEITAKGAIAVVDTFVPTKMA----------LVRVELDTNMISDKGVEHIKASLAKQGKANILGSLEEN-DGDEESDDE 844          
The following BLAST results are available for this feature:
BLAST of EWM21264.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101416|gb|EWM21264.1|0.000e+0100.00ran gtpase-activating protein 1 [Nannochloropsis g... [more]
gi|1173947465|gb|OQR95756.1|7.426e-3338.67hypothetical protein THRCLA_07598 [Thraustotheca c... [more]
gi|1173934483|gb|OQR85816.1|2.429e-3239.09hypothetical protein ACHHYP_11335 [Achlya hypogyna... [more]
gi|953494149|emb|CEG43743.1|5.498e-3236.19Ran GTPase-activating protein [Plasmopara halstedi... [more]
gi|1214711689|gb|OWZ22681.1|3.565e-3038.25hypothetical protein PHMEG_0002561 [Phytophthora m... [more]
gi|669149696|ref|XP_008610410.1|3.290e-2937.04hypothetical protein SDRG_06409 [Saprolegnia dicli... [more]
gi|299117112|emb|CBN73883.1|9.652e-2942.44Ran-GTPase activating protein [Ectocarpus siliculo... [more]
gi|970658961|gb|KUF96663.1|1.557e-2835.27hypothetical protein AM588_10006275 [Phytophthora ... [more]
gi|570972711|gb|ETP35503.1|2.972e-2835.27hypothetical protein F442_16347 [Phytophthora para... [more]
gi|566014653|gb|ETI37564.1|2.972e-2835.27hypothetical protein F443_16512 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9439rna9439Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications