EWM21268.1, cds9405 (CDS) Nannochloropsis gaditana

Overview
NameEWM21268.1
Unique Namecds9405
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037253.1:281979..282039 +
Alignment locationKK037253.1:282463..283871 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21268.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100618g2.816.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:281979..282039 +
KK037253.1supercontigKK037253.1:282463..283871 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM21268.1 vs. NCBI_GenBank
Match: gi|585101421|gb|EWM21268.1| (hypothetical protein Naga_100618g2 [Nannochloropsis gaditana])

HSP 1 Score: 919.842 bits (2376), Expect = 0.000e+0
Identity = 489/489 (100.00%), Postives = 489/489 (100.00%), Query Frame = 0 
Query:    1 MRLYVSFVLLLAPIAVSASAGSSIARLFGSDLSMPRDWLRALDHSYGGKDAGRTVDVSFDWHHSESTDPIPEQPIDETPSMPMEPAAMTTPEAPEVPTPETPATLEVPEIPAIPEIPEVPAVPAIPEVPAVPESTEVPEIPIEETPSMPETMTTTEDVEVPEVPEIPEIPEIPEIPEIPEIPAIPEIPEIPDIPAIPEVPAVPESTEVPEIPIEETPSMPETMTTTEDVEVPEVPEIPEIPEIPAIPEIPEIPEIPAIPEVPAVPESTEVPEIPIEETPSMPETMTTTEVPALSTLPSPPQRKLALVGDAITPRDTRVGEERSFVGSFDWNIPTLPPPPPLPTIPAPLDTLFPSPLSDAAWQVRLVLLGSAKLAEEDANLVAERFQALLDSRLEEVGETYQGEVAAKIASLGAGNRLRGKAIPGMKDLEAIPHPPSCVTESLPSFMVVAGNAPVSSETLRAALDSETFPSIFAAPTDYCGVKVSEIVMA 489
            MRLYVSFVLLLAPIAVSASAGSSIARLFGSDLSMPRDWLRALDHSYGGKDAGRTVDVSFDWHHSESTDPIPEQPIDETPSMPMEPAAMTTPEAPEVPTPETPATLEVPEIPAIPEIPEVPAVPAIPEVPAVPESTEVPEIPIEETPSMPETMTTTEDVEVPEVPEIPEIPEIPEIPEIPEIPAIPEIPEIPDIPAIPEVPAVPESTEVPEIPIEETPSMPETMTTTEDVEVPEVPEIPEIPEIPAIPEIPEIPEIPAIPEVPAVPESTEVPEIPIEETPSMPETMTTTEVPALSTLPSPPQRKLALVGDAITPRDTRVGEERSFVGSFDWNIPTLPPPPPLPTIPAPLDTLFPSPLSDAAWQVRLVLLGSAKLAEEDANLVAERFQALLDSRLEEVGETYQGEVAAKIASLGAGNRLRGKAIPGMKDLEAIPHPPSCVTESLPSFMVVAGNAPVSSETLRAALDSETFPSIFAAPTDYCGVKVSEIVMA
Sbjct:    1 MRLYVSFVLLLAPIAVSASAGSSIARLFGSDLSMPRDWLRALDHSYGGKDAGRTVDVSFDWHHSESTDPIPEQPIDETPSMPMEPAAMTTPEAPEVPTPETPATLEVPEIPAIPEIPEVPAVPAIPEVPAVPESTEVPEIPIEETPSMPETMTTTEDVEVPEVPEIPEIPEIPEIPEIPEIPAIPEIPEIPDIPAIPEVPAVPESTEVPEIPIEETPSMPETMTTTEDVEVPEVPEIPEIPEIPAIPEIPEIPEIPAIPEVPAVPESTEVPEIPIEETPSMPETMTTTEVPALSTLPSPPQRKLALVGDAITPRDTRVGEERSFVGSFDWNIPTLPPPPPLPTIPAPLDTLFPSPLSDAAWQVRLVLLGSAKLAEEDANLVAERFQALLDSRLEEVGETYQGEVAAKIASLGAGNRLRGKAIPGMKDLEAIPHPPSCVTESLPSFMVVAGNAPVSSETLRAALDSETFPSIFAAPTDYCGVKVSEIVMA 489
The following BLAST results are available for this feature:
BLAST of EWM21268.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101421|gb|EWM21268.1|0.000e+0100.00hypothetical protein Naga_100618g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9435rna9435Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications