EWM29751.1, cds937 (CDS) Nannochloropsis gaditana

Overview
NameEWM29751.1
Unique Namecds937
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:773299..773356 -
Alignment locationCM002456.1:772946..773055 -
Alignment locationCM002456.1:772597..772791 -
Alignment locationCM002456.1:771269..772501 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29751.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100022g51.850.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:773299..773356 -
CM002456.1supercontigCM002456.1:772946..773055 -
CM002456.1supercontigCM002456.1:772597..772791 -
CM002456.1supercontigCM002456.1:771269..772501 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM29751.1 vs. NCBI_GenBank
Match: gi|585112331|gb|EWM29751.1| (hypothetical protein Naga_100022g51 [Nannochloropsis gaditana])

HSP 1 Score: 1091.64 bits (2822), Expect = 0.000e+0
Identity = 531/531 (100.00%), Postives = 531/531 (100.00%), Query Frame = 0
Query:    1 MSGQHDLFRGSKNFHPPKFEDCYRVYHEVEDVGKTVRATKRRARWTFSFGERGQEREIVLAHSVVSGKKTITYDGRQIHHSEELSRTFSHSWFDGDHALRVDITDLVDVGRGRNDKMYELTLDGVPFGVLPLRPVHLPRLMEPNAQGPTAQGSVTTRKAPGQRETDEAFNPRGIHSVITRAGSRPKLGMSHSQQRPTSVTPPVDLLGGWEEDGGGLASDPFSGPASKEQFADFTASFNEAKGRSNATAHDLVKEFGGTSEVQERTPPLSMPPLTYGRPLPTFTYVQGPGANLSTDKRSTTALVRVATKDDSGEVDVDKATASLVNLNNLLDDEGASGSISPSKLYSSVYVDNRSLEEIKASRAARAPQPLARPIFIDRTPPPEIMTSPGAQPFFPGRGMLSSPMQQQHMMGGTPQPWQQPVETPTGPAMMGGGKYLQQQFTYQQRRGVPNTATTSMSGGSGMYLPPQQMSFPGQAMTSLNSNVQMPVQMQTSFVQQHQQHHPQAHHASYQQQGTAFPLRPPGSQNDPFFGL 531
            MSGQHDLFRGSKNFHPPKFEDCYRVYHEVEDVGKTVRATKRRARWTFSFGERGQEREIVLAHSVVSGKKTITYDGRQIHHSEELSRTFSHSWFDGDHALRVDITDLVDVGRGRNDKMYELTLDGVPFGVLPLRPVHLPRLMEPNAQGPTAQGSVTTRKAPGQRETDEAFNPRGIHSVITRAGSRPKLGMSHSQQRPTSVTPPVDLLGGWEEDGGGLASDPFSGPASKEQFADFTASFNEAKGRSNATAHDLVKEFGGTSEVQERTPPLSMPPLTYGRPLPTFTYVQGPGANLSTDKRSTTALVRVATKDDSGEVDVDKATASLVNLNNLLDDEGASGSISPSKLYSSVYVDNRSLEEIKASRAARAPQPLARPIFIDRTPPPEIMTSPGAQPFFPGRGMLSSPMQQQHMMGGTPQPWQQPVETPTGPAMMGGGKYLQQQFTYQQRRGVPNTATTSMSGGSGMYLPPQQMSFPGQAMTSLNSNVQMPVQMQTSFVQQHQQHHPQAHHASYQQQGTAFPLRPPGSQNDPFFGL
Sbjct:    1 MSGQHDLFRGSKNFHPPKFEDCYRVYHEVEDVGKTVRATKRRARWTFSFGERGQEREIVLAHSVVSGKKTITYDGRQIHHSEELSRTFSHSWFDGDHALRVDITDLVDVGRGRNDKMYELTLDGVPFGVLPLRPVHLPRLMEPNAQGPTAQGSVTTRKAPGQRETDEAFNPRGIHSVITRAGSRPKLGMSHSQQRPTSVTPPVDLLGGWEEDGGGLASDPFSGPASKEQFADFTASFNEAKGRSNATAHDLVKEFGGTSEVQERTPPLSMPPLTYGRPLPTFTYVQGPGANLSTDKRSTTALVRVATKDDSGEVDVDKATASLVNLNNLLDDEGASGSISPSKLYSSVYVDNRSLEEIKASRAARAPQPLARPIFIDRTPPPEIMTSPGAQPFFPGRGMLSSPMQQQHMMGGTPQPWQQPVETPTGPAMMGGGKYLQQQFTYQQRRGVPNTATTSMSGGSGMYLPPQQMSFPGQAMTSLNSNVQMPVQMQTSFVQQHQQHHPQAHHASYQQQGTAFPLRPPGSQNDPFFGL 531          
BLAST of EWM29751.1 vs. NCBI_GenBank
Match: gi|675190053|ref|XP_008903911.1| (hypothetical protein PPTG_09872 [Phytophthora parasitica INRA-310] >gi|566025781|gb|ETI48692.1| hypothetical protein F443_07310 [Phytophthora parasitica P1569] >gi|568021041|gb|ETL95149.1| hypothetical protein L917_07010 [Phytophthora parasitica] >gi|568051474|gb|ETM48379.1| hypothetical protein L914_07084 [Phytophthora parasitica] >gi|568096044|gb|ETN10799.1| hypothetical protein PPTG_09872 [Phytophthora parasitica INRA-310] >gi|570953219|gb|ETP18476.1| hypothetical protein F441_07311 [Phytophthora parasitica CJ01A1] >gi|570987766|gb|ETP46385.1| hypothetical protein F442_07370 [Phytophthora parasitica P10297])

HSP 1 Score: 77.411 bits (189), Expect = 1.745e-11
Identity = 51/139 (36.69%), Postives = 74/139 (53.24%), Query Frame = 0
Query:   25 VYHEVEDVGKTVRATKRRARWTFSFGERGQEREIVLAHSVVSGKKTITYDGRQIHHSEELSRTFSHSWFD--GDHALRVDITDLVDVGRGRNDKMYELTLDGVPFGVLP--LRPVHLPRLMEPNAQGPTAQGSVTTRKA 159
            +Y+EV +VGKT+ ++K+R  W     E G+E EI L HS+ SGKK +  DG   + S+ LS       F+  G H + + I   VD+    ND MY+L +DG+ F  LP  L P  LP+  +      T  GS  +R +
Sbjct:   20 LYYEVSNVGKTIESSKKRVVWRLKV-EEGREFEISLTHSLASGKKVLRVDGIVKYTSQSLSFGDWDYVFNLPGGHCVHIIIKPSVDL----ND-MYDLIVDGMSFRRLPNRLDPSKLPKQQDNVVSSATRTGSSGSRNS 152          
BLAST of EWM29751.1 vs. NCBI_GenBank
Match: gi|567963097|gb|ETK88603.1| (hypothetical protein L915_07173 [Phytophthora parasitica] >gi|567991801|gb|ETL42002.1| hypothetical protein L916_07121 [Phytophthora parasitica])

HSP 1 Score: 77.411 bits (189), Expect = 1.776e-11
Identity = 51/139 (36.69%), Postives = 74/139 (53.24%), Query Frame = 0
Query:   25 VYHEVEDVGKTVRATKRRARWTFSFGERGQEREIVLAHSVVSGKKTITYDGRQIHHSEELSRTFSHSWFD--GDHALRVDITDLVDVGRGRNDKMYELTLDGVPFGVLP--LRPVHLPRLMEPNAQGPTAQGSVTTRKA 159
            +Y+EV +VGKT+ ++K+R  W     E G+E EI L HS+ SGKK +  DG   + S+ LS       F+  G H + + I   VD+    ND MY+L +DG+ F  LP  L P  LP+  +      T  GS  +R +
Sbjct:   20 LYYEVSNVGKTIESSKKRVVWRLKV-EEGREFEISLTHSLASGKKVLRVDGIVKYTSQSLSFGDWDYVFNLPGGHCVHIIIKPSVDL----ND-MYDLIVDGMSFRRLPNRLDPSKLPKQQDNVVSSATRTGSSGSRNS 152          
BLAST of EWM29751.1 vs. NCBI_GenBank
Match: gi|570329491|gb|ETO77439.1| (hypothetical protein F444_07373 [Phytophthora parasitica P1976])

HSP 1 Score: 77.411 bits (189), Expect = 1.941e-11
Identity = 51/139 (36.69%), Postives = 74/139 (53.24%), Query Frame = 0
Query:   25 VYHEVEDVGKTVRATKRRARWTFSFGERGQEREIVLAHSVVSGKKTITYDGRQIHHSEELSRTFSHSWFD--GDHALRVDITDLVDVGRGRNDKMYELTLDGVPFGVLP--LRPVHLPRLMEPNAQGPTAQGSVTTRKA 159
            +Y+EV +VGKT+ ++K+R  W     E G+E EI L HS+ SGKK +  DG   + S+ LS       F+  G H + + I   VD+    ND MY+L +DG+ F  LP  L P  LP+  +      T  GS  +R +
Sbjct:   20 LYYEVSNVGKTIESSKKRVVWRLKV-EEGREFEISLTHSLASGKKVLRVDGIVKYTSQSLSFGDWDYVFNLPGGHCVHIIIKPSVDL----ND-MYDLIVDGMSFRRLPNRLDPSKLPKQQDNVVSSATRTGSSGSRNS 152          
BLAST of EWM29751.1 vs. NCBI_GenBank
Match: gi|1173936414|gb|OQR87369.1| (hypothetical protein ACHHYP_08963 [Achlya hypogyna])

HSP 1 Score: 75.485 bits (184), Expect = 5.943e-11
Identity = 70/236 (29.66%), Postives = 110/236 (46.61%), Query Frame = 0
Query:   25 VYHEVEDVGKTVRATKRRARWTFSFGERGQEREIVLAHSVVSGKKTITYDGRQIHHSEELSR-TFSHSWFDGDHALRVDITDLVDVGRGRNDKMYELTLDGVPFGVLP--LRPVHLPRLMEPNAQG----PT----AQGSVTTRKAPGQRE--TDEAFNPRGIHSVITRAGS-RPKLGMS------HSQQRPTSVTPPVDLLGGWEEDGGGLASDPFSGPASK-EQFADFTASFNE 239
            +Y+E+ +VGK V A+K+R  W     E G+E EI L HS+ SGKK++  DG   + +   S   + + +  G+H L   I   V++    ND  Y+L +DG+ F  LP  L+P +      P  +     PT    A GS  +R A G  E  T    N + +  +    G+ RP+   S      +S+Q      PP   L  ++     L++D F    +K + FA   A+F +
Sbjct:   24 LYYEIANVGKMVEASKKRITWRIKV-EEGKEYEISLTHSIASGKKSLRIDGIVTYQTSTFSLGDWDYVFNLGNHVLHCIIKPSVEL----NDS-YDLIVDGISFRRLPEQLKPKNDKDKRPPTQKALQARPTGSREASGSDLSRTASGSWECTTCTLINEKALAPICEACGAPRPRQSASKQPTYEYSKQPSKKELPPTTQLNAFDAPVKVLSNDGFGVDMTKHDPFAATNAAFAQ 253          
BLAST of EWM29751.1 vs. NCBI_GenBank
Match: gi|970627920|gb|KUF75710.1| (hypothetical protein AM587_10005425 [Phytophthora nicotianae])

HSP 1 Score: 75.0998 bits (183), Expect = 1.692e-10
Identity = 51/139 (36.69%), Postives = 74/139 (53.24%), Query Frame = 0
Query:   25 VYHEVEDVGKTVRATKRRARWTFSFGERGQEREIVLAHSVVSGKKTITYDGRQIHHSEELSRTFSHSWFD--GDHALRVDITDLVDVGRGRNDKMYELTLDGVPFGVLP--LRPVHLPRLMEPNAQGPTAQGSVTTRKA 159
            +Y+EV +VGKT+ ++K+R  W     E G+E EI L HS+ SGKK +  DG   + S+ LS       F+  G H + + I   VD+    ND MY+L +DG+ F  LP  L P  LP+  +      T  GS  +R +
Sbjct:  429 LYYEVSNVGKTIESSKKRVVWRLKV-EEGREFEISLTHSLASGKKVLRVDGIVKYTSQSLSFGDWDYVFNLPGGHCVHIIIKPSVDL----ND-MYDLIVDGMSFRRLPNRLDPSKLPKQQDNVVSSATRTGSSGSRNS 561          
BLAST of EWM29751.1 vs. NCBI_GenBank
Match: gi|1210518587|dbj|GAX22463.1| (hypothetical protein FisN_14Hh078 [Fistulifera solaris])

HSP 1 Score: 73.559 bits (179), Expect = 3.736e-10
Identity = 56/193 (29.02%), Postives = 83/193 (43.01%), Query Frame = 0
Query:   39 TKRRARWTFSFGE-------------RGQEREIVLAHSVVSGKKTITYDGRQIHHSEELSRTFSHSWF-DGDHALRVDITDLVDVGRGRNDKMYELTLDGVPFGVLPLRPVHLPRLMEPNAQGPTAQGSVTTRK---------APGQRETDEAFNPRGIHSVITRAGSRPKLGMSHSQQRPTSVTPPVDLLGG 208
            TKRR RW F F               RG+E EIV+  SV SGK+ I YDG++IH+S   +    H+W   G+H ++V       +      + Y++ +DG  F         +P++ E   +G TA  S T  +         AP   + +EA   R I + +            H  +   +  P VDLLGG
Sbjct:   22 TKRRVRWRFGFPNKQALAQGLSGTDCRGEEHEIVVVWSVTSGKRQIMYDGKEIHYSATRTSVIDHTWSGKGNHVMKVVCHAAPPMSANPGFRQYDMFIDGQSF-------FSMPKVYELGIKGGTAATSSTAVRGYSLPPAIHAPQTPDEEEAELQRAITASLQET-------KQHLNRAAPASPPEVDLLGG 200          
BLAST of EWM29751.1 vs. NCBI_GenBank
Match: gi|698789064|ref|XP_009827564.1| (hypothetical protein H257_04668 [Aphanomyces astaci] >gi|574117411|gb|ETV82893.1| hypothetical protein H257_04668 [Aphanomyces astaci])

HSP 1 Score: 72.4034 bits (176), Expect = 4.549e-10
Identity = 42/115 (36.52%), Postives = 61/115 (53.04%), Query Frame = 0
Query:   16 PPKFEDCYRVYHEVEDVGKTVRATKRRARWTFSFGERGQEREIVLAHSVVSGKKTITYDGRQIHHSEELSRTFSHSWFDGDH---ALRVDITDLVDVGRGRNDKMYELTLDGVPF 127
            PPK     RV H VE+VG  + ++K+RA W F+FG+  +  E+VL HSV+S KK + YDGR+ +H   +S          +H   A+ V I +       R    Y+L +D  PF
Sbjct:   20 PPK-----RVGHMVENVGSNIASSKKRASWKFTFGDSDKVHEVVLLHSVMSAKKVVEYDGREKYHVALISPGDWSIILMLEHRNTAIEVRINEFESPDMPR----YDLLIDRAPF 125          
BLAST of EWM29751.1 vs. NCBI_GenBank
Match: gi|219122918|ref|XP_002181783.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407059|gb|EEC46997.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 72.0182 bits (175), Expect = 4.989e-10
Identity = 56/201 (27.86%), Postives = 86/201 (42.79%), Query Frame = 0
Query:   22 CYRVYHEVEDVGKTVRATKRRARWTFSFGE-------------RGQEREIVLAHSVVSGKKTITYDGRQIHHSEELSRTFSHSWF-DGDHALRVDITDLVDVGRGRNDKMYELTLDGVPFGVLPLRPVHLPRLMEPNAQ-GPTAQGSVTTRKAPGQRETDEAFNPRGIHSVITRAGSRPKLGMSHSQQRPTSVTPP-VDLL 206
             Y++       GK V ATKRR RW F F               RG+E EIV+  SV SGK+ I  DGR++H S   +    H+W   G+H ++V       +      + Y+  +DG  F         +P++ E   + G +A       ++P     ++A     I++ +    SR +LG         S+ PP  DLL
Sbjct:    7 VYQIDFSAVAAGKRVAATKRRIRWRFGFPNQAALADGKTGIECRGEEHEIVIVWSVTSGKRQIIMDGREVHFSNTRTSLMDHTWSGKGNHVMKVLCHASAPMSANPGFRQYDFFIDGQSF-------FRMPKVYELGVRPGSSASPRAPAVRSPSTLSQEDAELQAAINASLEE--SRRRLGPRAGSSGGGSLAPPAADLL 198          
BLAST of EWM29751.1 vs. NCBI_GenBank
Match: gi|673015664|ref|XP_008861793.1| (hypothetical protein H310_00700 [Aphanomyces invadans] >gi|574483391|gb|ETW10382.1| hypothetical protein H310_00700 [Aphanomyces invadans])

HSP 1 Score: 72.0182 bits (175), Expect = 5.894e-10
Identity = 42/115 (36.52%), Postives = 62/115 (53.91%), Query Frame = 0
Query:   16 PPKFEDCYRVYHEVEDVGKTVRATKRRARWTFSFGERGQEREIVLAHSVVSGKKTITYDGRQIHHSEELSRTFSHSWFDGDH---ALRVDITDLVDVGRGRNDKMYELTLDGVPF 127
            PPK     RV H VE+VG  + ++K+RA W F+FGE  +  E+VL HSV+S KK + YDGR+ +H   +S          +H   A+ V I +       R    Y++ +D VP+
Sbjct:   20 PPK-----RVGHMVENVGGNIASSKKRASWKFTFGESDKVHEVVLLHSVMSAKKVVEYDGREKYHVAAISPGDWSIILMLEHRNSAIEVRINEFESPDMPR----YDMLIDRVPY 125          
The following BLAST results are available for this feature:
BLAST of EWM29751.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112331|gb|EWM29751.1|0.000e+0100.00hypothetical protein Naga_100022g51 [Nannochlorops... [more]
gi|675190053|ref|XP_008903911.1|1.745e-1136.69hypothetical protein PPTG_09872 [Phytophthora para... [more]
gi|567963097|gb|ETK88603.1|1.776e-1136.69hypothetical protein L915_07173 [Phytophthora para... [more]
gi|570329491|gb|ETO77439.1|1.941e-1136.69hypothetical protein F444_07373 [Phytophthora para... [more]
gi|1173936414|gb|OQR87369.1|5.943e-1129.66hypothetical protein ACHHYP_08963 [Achlya hypogyna... [more]
gi|970627920|gb|KUF75710.1|1.692e-1036.69hypothetical protein AM587_10005425 [Phytophthora ... [more]
gi|1210518587|dbj|GAX22463.1|3.736e-1029.02hypothetical protein FisN_14Hh078 [Fistulifera sol... [more]
gi|698789064|ref|XP_009827564.1|4.549e-1036.52hypothetical protein H257_04668 [Aphanomyces astac... [more]
gi|219122918|ref|XP_002181783.1|4.989e-1027.86predicted protein, partial [Phaeodactylum tricornu... [more]
gi|673015664|ref|XP_008861793.1|5.894e-1036.52hypothetical protein H310_00700 [Aphanomyces invad... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna937rna937Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications