EWM29751.1, cds937 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM29751.1 vs. NCBI_GenBank
Match: gi|585112331|gb|EWM29751.1| (hypothetical protein Naga_100022g51 [Nannochloropsis gaditana]) HSP 1 Score: 1091.64 bits (2822), Expect = 0.000e+0 Identity = 531/531 (100.00%), Postives = 531/531 (100.00%), Query Frame = 0
Query: 1 MSGQHDLFRGSKNFHPPKFEDCYRVYHEVEDVGKTVRATKRRARWTFSFGERGQEREIVLAHSVVSGKKTITYDGRQIHHSEELSRTFSHSWFDGDHALRVDITDLVDVGRGRNDKMYELTLDGVPFGVLPLRPVHLPRLMEPNAQGPTAQGSVTTRKAPGQRETDEAFNPRGIHSVITRAGSRPKLGMSHSQQRPTSVTPPVDLLGGWEEDGGGLASDPFSGPASKEQFADFTASFNEAKGRSNATAHDLVKEFGGTSEVQERTPPLSMPPLTYGRPLPTFTYVQGPGANLSTDKRSTTALVRVATKDDSGEVDVDKATASLVNLNNLLDDEGASGSISPSKLYSSVYVDNRSLEEIKASRAARAPQPLARPIFIDRTPPPEIMTSPGAQPFFPGRGMLSSPMQQQHMMGGTPQPWQQPVETPTGPAMMGGGKYLQQQFTYQQRRGVPNTATTSMSGGSGMYLPPQQMSFPGQAMTSLNSNVQMPVQMQTSFVQQHQQHHPQAHHASYQQQGTAFPLRPPGSQNDPFFGL 531
MSGQHDLFRGSKNFHPPKFEDCYRVYHEVEDVGKTVRATKRRARWTFSFGERGQEREIVLAHSVVSGKKTITYDGRQIHHSEELSRTFSHSWFDGDHALRVDITDLVDVGRGRNDKMYELTLDGVPFGVLPLRPVHLPRLMEPNAQGPTAQGSVTTRKAPGQRETDEAFNPRGIHSVITRAGSRPKLGMSHSQQRPTSVTPPVDLLGGWEEDGGGLASDPFSGPASKEQFADFTASFNEAKGRSNATAHDLVKEFGGTSEVQERTPPLSMPPLTYGRPLPTFTYVQGPGANLSTDKRSTTALVRVATKDDSGEVDVDKATASLVNLNNLLDDEGASGSISPSKLYSSVYVDNRSLEEIKASRAARAPQPLARPIFIDRTPPPEIMTSPGAQPFFPGRGMLSSPMQQQHMMGGTPQPWQQPVETPTGPAMMGGGKYLQQQFTYQQRRGVPNTATTSMSGGSGMYLPPQQMSFPGQAMTSLNSNVQMPVQMQTSFVQQHQQHHPQAHHASYQQQGTAFPLRPPGSQNDPFFGL
Sbjct: 1 MSGQHDLFRGSKNFHPPKFEDCYRVYHEVEDVGKTVRATKRRARWTFSFGERGQEREIVLAHSVVSGKKTITYDGRQIHHSEELSRTFSHSWFDGDHALRVDITDLVDVGRGRNDKMYELTLDGVPFGVLPLRPVHLPRLMEPNAQGPTAQGSVTTRKAPGQRETDEAFNPRGIHSVITRAGSRPKLGMSHSQQRPTSVTPPVDLLGGWEEDGGGLASDPFSGPASKEQFADFTASFNEAKGRSNATAHDLVKEFGGTSEVQERTPPLSMPPLTYGRPLPTFTYVQGPGANLSTDKRSTTALVRVATKDDSGEVDVDKATASLVNLNNLLDDEGASGSISPSKLYSSVYVDNRSLEEIKASRAARAPQPLARPIFIDRTPPPEIMTSPGAQPFFPGRGMLSSPMQQQHMMGGTPQPWQQPVETPTGPAMMGGGKYLQQQFTYQQRRGVPNTATTSMSGGSGMYLPPQQMSFPGQAMTSLNSNVQMPVQMQTSFVQQHQQHHPQAHHASYQQQGTAFPLRPPGSQNDPFFGL 531
BLAST of EWM29751.1 vs. NCBI_GenBank
Match: gi|675190053|ref|XP_008903911.1| (hypothetical protein PPTG_09872 [Phytophthora parasitica INRA-310] >gi|566025781|gb|ETI48692.1| hypothetical protein F443_07310 [Phytophthora parasitica P1569] >gi|568021041|gb|ETL95149.1| hypothetical protein L917_07010 [Phytophthora parasitica] >gi|568051474|gb|ETM48379.1| hypothetical protein L914_07084 [Phytophthora parasitica] >gi|568096044|gb|ETN10799.1| hypothetical protein PPTG_09872 [Phytophthora parasitica INRA-310] >gi|570953219|gb|ETP18476.1| hypothetical protein F441_07311 [Phytophthora parasitica CJ01A1] >gi|570987766|gb|ETP46385.1| hypothetical protein F442_07370 [Phytophthora parasitica P10297]) HSP 1 Score: 77.411 bits (189), Expect = 1.745e-11 Identity = 51/139 (36.69%), Postives = 74/139 (53.24%), Query Frame = 0
Query: 25 VYHEVEDVGKTVRATKRRARWTFSFGERGQEREIVLAHSVVSGKKTITYDGRQIHHSEELSRTFSHSWFD--GDHALRVDITDLVDVGRGRNDKMYELTLDGVPFGVLP--LRPVHLPRLMEPNAQGPTAQGSVTTRKA 159
+Y+EV +VGKT+ ++K+R W E G+E EI L HS+ SGKK + DG + S+ LS F+ G H + + I VD+ ND MY+L +DG+ F LP L P LP+ + T GS +R +
Sbjct: 20 LYYEVSNVGKTIESSKKRVVWRLKV-EEGREFEISLTHSLASGKKVLRVDGIVKYTSQSLSFGDWDYVFNLPGGHCVHIIIKPSVDL----ND-MYDLIVDGMSFRRLPNRLDPSKLPKQQDNVVSSATRTGSSGSRNS 152
BLAST of EWM29751.1 vs. NCBI_GenBank
Match: gi|567963097|gb|ETK88603.1| (hypothetical protein L915_07173 [Phytophthora parasitica] >gi|567991801|gb|ETL42002.1| hypothetical protein L916_07121 [Phytophthora parasitica]) HSP 1 Score: 77.411 bits (189), Expect = 1.776e-11 Identity = 51/139 (36.69%), Postives = 74/139 (53.24%), Query Frame = 0
Query: 25 VYHEVEDVGKTVRATKRRARWTFSFGERGQEREIVLAHSVVSGKKTITYDGRQIHHSEELSRTFSHSWFD--GDHALRVDITDLVDVGRGRNDKMYELTLDGVPFGVLP--LRPVHLPRLMEPNAQGPTAQGSVTTRKA 159
+Y+EV +VGKT+ ++K+R W E G+E EI L HS+ SGKK + DG + S+ LS F+ G H + + I VD+ ND MY+L +DG+ F LP L P LP+ + T GS +R +
Sbjct: 20 LYYEVSNVGKTIESSKKRVVWRLKV-EEGREFEISLTHSLASGKKVLRVDGIVKYTSQSLSFGDWDYVFNLPGGHCVHIIIKPSVDL----ND-MYDLIVDGMSFRRLPNRLDPSKLPKQQDNVVSSATRTGSSGSRNS 152
BLAST of EWM29751.1 vs. NCBI_GenBank
Match: gi|570329491|gb|ETO77439.1| (hypothetical protein F444_07373 [Phytophthora parasitica P1976]) HSP 1 Score: 77.411 bits (189), Expect = 1.941e-11 Identity = 51/139 (36.69%), Postives = 74/139 (53.24%), Query Frame = 0
Query: 25 VYHEVEDVGKTVRATKRRARWTFSFGERGQEREIVLAHSVVSGKKTITYDGRQIHHSEELSRTFSHSWFD--GDHALRVDITDLVDVGRGRNDKMYELTLDGVPFGVLP--LRPVHLPRLMEPNAQGPTAQGSVTTRKA 159
+Y+EV +VGKT+ ++K+R W E G+E EI L HS+ SGKK + DG + S+ LS F+ G H + + I VD+ ND MY+L +DG+ F LP L P LP+ + T GS +R +
Sbjct: 20 LYYEVSNVGKTIESSKKRVVWRLKV-EEGREFEISLTHSLASGKKVLRVDGIVKYTSQSLSFGDWDYVFNLPGGHCVHIIIKPSVDL----ND-MYDLIVDGMSFRRLPNRLDPSKLPKQQDNVVSSATRTGSSGSRNS 152
BLAST of EWM29751.1 vs. NCBI_GenBank
Match: gi|1173936414|gb|OQR87369.1| (hypothetical protein ACHHYP_08963 [Achlya hypogyna]) HSP 1 Score: 75.485 bits (184), Expect = 5.943e-11 Identity = 70/236 (29.66%), Postives = 110/236 (46.61%), Query Frame = 0
Query: 25 VYHEVEDVGKTVRATKRRARWTFSFGERGQEREIVLAHSVVSGKKTITYDGRQIHHSEELSR-TFSHSWFDGDHALRVDITDLVDVGRGRNDKMYELTLDGVPFGVLP--LRPVHLPRLMEPNAQG----PT----AQGSVTTRKAPGQRE--TDEAFNPRGIHSVITRAGS-RPKLGMS------HSQQRPTSVTPPVDLLGGWEEDGGGLASDPFSGPASK-EQFADFTASFNE 239
+Y+E+ +VGK V A+K+R W E G+E EI L HS+ SGKK++ DG + + S + + + G+H L I V++ ND Y+L +DG+ F LP L+P + P + PT A GS +R A G E T N + + + G+ RP+ S +S+Q PP L ++ L++D F +K + FA A+F +
Sbjct: 24 LYYEIANVGKMVEASKKRITWRIKV-EEGKEYEISLTHSIASGKKSLRIDGIVTYQTSTFSLGDWDYVFNLGNHVLHCIIKPSVEL----NDS-YDLIVDGISFRRLPEQLKPKNDKDKRPPTQKALQARPTGSREASGSDLSRTASGSWECTTCTLINEKALAPICEACGAPRPRQSASKQPTYEYSKQPSKKELPPTTQLNAFDAPVKVLSNDGFGVDMTKHDPFAATNAAFAQ 253
BLAST of EWM29751.1 vs. NCBI_GenBank
Match: gi|970627920|gb|KUF75710.1| (hypothetical protein AM587_10005425 [Phytophthora nicotianae]) HSP 1 Score: 75.0998 bits (183), Expect = 1.692e-10 Identity = 51/139 (36.69%), Postives = 74/139 (53.24%), Query Frame = 0
Query: 25 VYHEVEDVGKTVRATKRRARWTFSFGERGQEREIVLAHSVVSGKKTITYDGRQIHHSEELSRTFSHSWFD--GDHALRVDITDLVDVGRGRNDKMYELTLDGVPFGVLP--LRPVHLPRLMEPNAQGPTAQGSVTTRKA 159
+Y+EV +VGKT+ ++K+R W E G+E EI L HS+ SGKK + DG + S+ LS F+ G H + + I VD+ ND MY+L +DG+ F LP L P LP+ + T GS +R +
Sbjct: 429 LYYEVSNVGKTIESSKKRVVWRLKV-EEGREFEISLTHSLASGKKVLRVDGIVKYTSQSLSFGDWDYVFNLPGGHCVHIIIKPSVDL----ND-MYDLIVDGMSFRRLPNRLDPSKLPKQQDNVVSSATRTGSSGSRNS 561
BLAST of EWM29751.1 vs. NCBI_GenBank
Match: gi|1210518587|dbj|GAX22463.1| (hypothetical protein FisN_14Hh078 [Fistulifera solaris]) HSP 1 Score: 73.559 bits (179), Expect = 3.736e-10 Identity = 56/193 (29.02%), Postives = 83/193 (43.01%), Query Frame = 0
Query: 39 TKRRARWTFSFGE-------------RGQEREIVLAHSVVSGKKTITYDGRQIHHSEELSRTFSHSWF-DGDHALRVDITDLVDVGRGRNDKMYELTLDGVPFGVLPLRPVHLPRLMEPNAQGPTAQGSVTTRK---------APGQRETDEAFNPRGIHSVITRAGSRPKLGMSHSQQRPTSVTPPVDLLGG 208
TKRR RW F F RG+E EIV+ SV SGK+ I YDG++IH+S + H+W G+H ++V + + Y++ +DG F +P++ E +G TA S T + AP + +EA R I + + H + + P VDLLGG
Sbjct: 22 TKRRVRWRFGFPNKQALAQGLSGTDCRGEEHEIVVVWSVTSGKRQIMYDGKEIHYSATRTSVIDHTWSGKGNHVMKVVCHAAPPMSANPGFRQYDMFIDGQSF-------FSMPKVYELGIKGGTAATSSTAVRGYSLPPAIHAPQTPDEEEAELQRAITASLQET-------KQHLNRAAPASPPEVDLLGG 200
BLAST of EWM29751.1 vs. NCBI_GenBank
Match: gi|698789064|ref|XP_009827564.1| (hypothetical protein H257_04668 [Aphanomyces astaci] >gi|574117411|gb|ETV82893.1| hypothetical protein H257_04668 [Aphanomyces astaci]) HSP 1 Score: 72.4034 bits (176), Expect = 4.549e-10 Identity = 42/115 (36.52%), Postives = 61/115 (53.04%), Query Frame = 0
Query: 16 PPKFEDCYRVYHEVEDVGKTVRATKRRARWTFSFGERGQEREIVLAHSVVSGKKTITYDGRQIHHSEELSRTFSHSWFDGDH---ALRVDITDLVDVGRGRNDKMYELTLDGVPF 127
PPK RV H VE+VG + ++K+RA W F+FG+ + E+VL HSV+S KK + YDGR+ +H +S +H A+ V I + R Y+L +D PF
Sbjct: 20 PPK-----RVGHMVENVGSNIASSKKRASWKFTFGDSDKVHEVVLLHSVMSAKKVVEYDGREKYHVALISPGDWSIILMLEHRNTAIEVRINEFESPDMPR----YDLLIDRAPF 125
BLAST of EWM29751.1 vs. NCBI_GenBank
Match: gi|219122918|ref|XP_002181783.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407059|gb|EEC46997.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 72.0182 bits (175), Expect = 4.989e-10 Identity = 56/201 (27.86%), Postives = 86/201 (42.79%), Query Frame = 0
Query: 22 CYRVYHEVEDVGKTVRATKRRARWTFSFGE-------------RGQEREIVLAHSVVSGKKTITYDGRQIHHSEELSRTFSHSWF-DGDHALRVDITDLVDVGRGRNDKMYELTLDGVPFGVLPLRPVHLPRLMEPNAQ-GPTAQGSVTTRKAPGQRETDEAFNPRGIHSVITRAGSRPKLGMSHSQQRPTSVTPP-VDLL 206
Y++ GK V ATKRR RW F F RG+E EIV+ SV SGK+ I DGR++H S + H+W G+H ++V + + Y+ +DG F +P++ E + G +A ++P ++A I++ + SR +LG S+ PP DLL
Sbjct: 7 VYQIDFSAVAAGKRVAATKRRIRWRFGFPNQAALADGKTGIECRGEEHEIVIVWSVTSGKRQIIMDGREVHFSNTRTSLMDHTWSGKGNHVMKVLCHASAPMSANPGFRQYDFFIDGQSF-------FRMPKVYELGVRPGSSASPRAPAVRSPSTLSQEDAELQAAINASLEE--SRRRLGPRAGSSGGGSLAPPAADLL 198
BLAST of EWM29751.1 vs. NCBI_GenBank
Match: gi|673015664|ref|XP_008861793.1| (hypothetical protein H310_00700 [Aphanomyces invadans] >gi|574483391|gb|ETW10382.1| hypothetical protein H310_00700 [Aphanomyces invadans]) HSP 1 Score: 72.0182 bits (175), Expect = 5.894e-10 Identity = 42/115 (36.52%), Postives = 62/115 (53.91%), Query Frame = 0
Query: 16 PPKFEDCYRVYHEVEDVGKTVRATKRRARWTFSFGERGQEREIVLAHSVVSGKKTITYDGRQIHHSEELSRTFSHSWFDGDH---ALRVDITDLVDVGRGRNDKMYELTLDGVPF 127
PPK RV H VE+VG + ++K+RA W F+FGE + E+VL HSV+S KK + YDGR+ +H +S +H A+ V I + R Y++ +D VP+
Sbjct: 20 PPK-----RVGHMVENVGGNIASSKKRASWKFTFGESDKVHEVVLLHSVMSAKKVVEYDGREKYHVAAISPGDWSIILMLEHRNSAIEVRINEFESPDMPR----YDMLIDRVPY 125 The following BLAST results are available for this feature:
BLAST of EWM29751.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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