EWM21311.1, cds9362 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21311.1 vs. NCBI_GenBank
Match: gi|585101493|gb|EWM21311.1| (protein of unknown function DUF399 [Nannochloropsis gaditana]) HSP 1 Score: 1135.94 bits (2937), Expect = 0.000e+0 Identity = 571/571 (100.00%), Postives = 571/571 (100.00%), Query Frame = 0
Query: 1 MPLLRRRRPGFIGRGRCQTPPQLRPPVPDGLSLAATTTFFLLQLLLHASHVAGLTTCRLTSFASSMDARAPPAFQSLPISSPCPSRSRMPVHRRPPLSASSSSSSASSTPPPSSNLPPSSSSSAPSPIPINSFSALKPGPSAPSGVSSHAQPPPSTRRRFLQSLRSASLSLVAFLSPAFLASSRPALALRAPSKLAPPPPPSVRPFLWQVLMSDPPQLQPYTSEGEKAVLRDMARTCNAVFLGEHVEKGGGGQGADEDQTLALRVVEALGKYKPRDASLVLGLEAVQQKFQPALDAYVADTGTDLAAADARLRQETEWDERASVPFEACLPLLHRARGEGIKLLGLGLESEALAKVRQVGLEGLGEEERGRYVADPSGFIQSVKAPAFKLYAERFIMPSFAARAATAVTGEAQGGKGPSPGMTPAPLSAAKFLAARILWDESMSTAAIRHLKTHPKDLVVLLVGADHIKFGLGAPARLERLLRSAEVETAPGRGKVKSILLNPTPADTGSETRRLRLSLGYANNLANCRPVADFLWWSQYPRVAWLEHPQNPISSVYSEDDTLFQVFSGRK 571
MPLLRRRRPGFIGRGRCQTPPQLRPPVPDGLSLAATTTFFLLQLLLHASHVAGLTTCRLTSFASSMDARAPPAFQSLPISSPCPSRSRMPVHRRPPLSASSSSSSASSTPPPSSNLPPSSSSSAPSPIPINSFSALKPGPSAPSGVSSHAQPPPSTRRRFLQSLRSASLSLVAFLSPAFLASSRPALALRAPSKLAPPPPPSVRPFLWQVLMSDPPQLQPYTSEGEKAVLRDMARTCNAVFLGEHVEKGGGGQGADEDQTLALRVVEALGKYKPRDASLVLGLEAVQQKFQPALDAYVADTGTDLAAADARLRQETEWDERASVPFEACLPLLHRARGEGIKLLGLGLESEALAKVRQVGLEGLGEEERGRYVADPSGFIQSVKAPAFKLYAERFIMPSFAARAATAVTGEAQGGKGPSPGMTPAPLSAAKFLAARILWDESMSTAAIRHLKTHPKDLVVLLVGADHIKFGLGAPARLERLLRSAEVETAPGRGKVKSILLNPTPADTGSETRRLRLSLGYANNLANCRPVADFLWWSQYPRVAWLEHPQNPISSVYSEDDTLFQVFSGRK
Sbjct: 1 MPLLRRRRPGFIGRGRCQTPPQLRPPVPDGLSLAATTTFFLLQLLLHASHVAGLTTCRLTSFASSMDARAPPAFQSLPISSPCPSRSRMPVHRRPPLSASSSSSSASSTPPPSSNLPPSSSSSAPSPIPINSFSALKPGPSAPSGVSSHAQPPPSTRRRFLQSLRSASLSLVAFLSPAFLASSRPALALRAPSKLAPPPPPSVRPFLWQVLMSDPPQLQPYTSEGEKAVLRDMARTCNAVFLGEHVEKGGGGQGADEDQTLALRVVEALGKYKPRDASLVLGLEAVQQKFQPALDAYVADTGTDLAAADARLRQETEWDERASVPFEACLPLLHRARGEGIKLLGLGLESEALAKVRQVGLEGLGEEERGRYVADPSGFIQSVKAPAFKLYAERFIMPSFAARAATAVTGEAQGGKGPSPGMTPAPLSAAKFLAARILWDESMSTAAIRHLKTHPKDLVVLLVGADHIKFGLGAPARLERLLRSAEVETAPGRGKVKSILLNPTPADTGSETRRLRLSLGYANNLANCRPVADFLWWSQYPRVAWLEHPQNPISSVYSEDDTLFQVFSGRK 571
BLAST of EWM21311.1 vs. NCBI_GenBank
Match: gi|873221877|emb|CEM32425.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 258.84 bits (660), Expect = 1.084e-76 Identity = 155/361 (42.94%), Postives = 203/361 (56.23%), Query Frame = 0
Query: 200 PPSVRPFLWQVLMSDPPQLQPYTS-EGEKAVLRDMARTCNAVFLGEHVEKGGGGQGADEDQTLALRVVEALGKYKPRDASLVLGLEAVQQKFQPALDAYVADTGTDLAAADARLRQETEWDERASVPFEACLPLLHRARGEGIKLLGLGLESEALAKVRQVGLEGLGEEERGRYVADPSGFIQSVKAPAFKLYAERFIMPSFAARAATAVTGEAQGGKGPSPGMTPAPLSAAKFLAARILWDESMSTAAIRHLKTHPKDLVVLLVGADHIKFGLGAPARLERL-LRSAEVETAPGRGKVKSILLNPTPADTGSETRRLRLSLGYANNLANCRPVADFLWWSQYPRVAWLEHPQNPISSVYS 558
P S RP +Q+L +DPP +QP TS GE +L+ + R V LGEH ++G DQ LALR+V L + +L LGLE VQ +FQPALD Y++ DLAAAD LR+ TEWD+R PFE LPL H AR + L+ +SEA KV+ G EGL ER RYV D GF+ P FK+YA+R I SF T V G + P P + F AAR+LWDE+M+ AA + L+ HP+ +VLL G+DH+K+G G AR ERL + G+ +V S+LLNPT ++ S RRLRL LG + R +AD++W+S PRV L NP + Y
Sbjct: 81 PLSPRPLAYQILPTDPPTMQPMTSGRGETNMLKKILRENELVLLGEHHDQG-------IDQELALRLVREL---RGLHYNLALGLEMVQLQFQPALDRYISREVADLAAADEDLRRSTEWDDRWPFPFENYLPLFHWARQARVPLVAANTDSEAQLKVQLSGFEGLRGAERQRYVPDVLGFLNYTNQPGFKMYADRVIRRSFEYHNETGVLGPS-----PDPNL---------FFAARVLWDETMANAATKWLEEHPRHKMVLLAGSDHVKYGYGIQARAERLGTDYYNLRRRDGKFRVASVLLNPTAEESYSYIRRLRLGLGQGARKSYSRFLADYIWFSTSPRVNLLTRMLNPRDAPYD 417
BLAST of EWM21311.1 vs. NCBI_GenBank
Match: gi|298715340|emb|CBJ27968.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 200.29 bits (508), Expect = 2.142e-53 Identity = 127/371 (34.23%), Postives = 197/371 (53.10%), Query Frame = 0
Query: 204 RPFLWQVLMSDPPQLQPYTSEGEKAVLRDMARTCNAVFLGEHVEKGGGGQGADEDQTLALRVVEALGKYKPRDASLVLGLEAVQQKFQPALDAYVADTGTD-------LAAADARLRQETEWDERASVPFEACLPLLHRARGEGIKLLGLGLESEALAKVRQVGLEGLGEEERGRYVADPSGFIQSVKAPAFKLYAERFIMPSFAARAATAVTGEAQGGKGPSPGMTPAPLSAAKFLAARILWDESMSTAAIRHLKTHPKDLVVLLVG-ADHIKFGLGAPARLERLLRSAEVETAPGRGKVKSILLNPTPADTGSETRRLRLSLGYANNLANCRPVADFLWWSQYPRVAWLEHPQNPISSVYSEDDTLFQV 566
RP +++ +DPP P+ + E +++++A VF G H E D LA V+ L A++ GLE V+ +FQPALD+YVA L +ADA L + T+W ER + PFE LPL H AR G+ ++ LG++SE + V Q G++ LGE++R YV+D GF+ V+ F++YA++ I PS+ + G P + F AARIL DE++++ A+ T K L + +V DH+KFG GA R R+ +S E KS+L+NPT + S++R LRL+L YA++L N +P+A++LW+S+ P+V + NP + E L+ +
Sbjct: 217 RPLAYRIEYTDPPTTVPFPRDTEPNLVKEIAGQ-GLVFFGVHGEDA-------PDPALAADVIGKLSASLKNQAAI--GLEQVEMQFQPALDSYVAGGDQGGDGKDEDLDSADAELARATQWAERCAFPFENFLPLFHLARRRGLPMVALGVDSEKVFDVMQNGMDSLGEDDRNAYVSDFKGFVTYVRDKGFQVYADKLIFPSYDRLKEAGLLGS-------------KPPTKPNFFAARILADEAVASKAV-DWATDNKGLKLFVVQREDHVKFGFGASGRAARIAKSLGAEM-----PTKSVLINPTAEGSLSQSRSLRLALEYADDLQNGKPLANYLWFSKSPKVNQIPRMVNPEDKGWLERINLYDL 558
BLAST of EWM21311.1 vs. NCBI_GenBank
Match: gi|873235976|emb|CEL99640.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 171.785 bits (434), Expect = 8.883e-44 Identity = 128/394 (32.49%), Postives = 199/394 (50.51%), Query Frame = 0
Query: 156 TRRRFLQ---SLRSASLSLVAFLSPAFLASSRPALALRAPSKLAPPPPPSVRPFLWQVLMSDPPQLQPYTSEGEKAVLRDMA-RTCNA-VFLGEHVEKGGGGQGADEDQTLALRVVEALGKYKPRDAS-----LVLGLEAVQQKFQPALDAYVADTGTDLAAADARLRQETEWDERASVPFEACLPLLHRARGEGIKLLGLGLESEALAKVRQVGLEGLGEEERGRYVADPSGFIQSVKAPAFKLYAERFIMPSFAARAATAVTGEAQGGKGPSPGMTPAPLSAAKFLAARILWDESMSTAAIRHLKTHPKDLVVLLVGADHIKFGLGAPARLERLLRSAEVETAPGRGKVKSILLNPTPADTGSETRRLRLSLGYANNLANCRPVADFLWWSQ 539
+RR LQ +L LSL A LS + RP L L P L V+ W+ S P + P + + LR + R N V +GEH A ED L ++ + + + + ++ + +GLE VQ FQP LD Y++ TD+ L +TEW R + PF+A LP+ A+ G+ L+ L +E + V GLEGLG++ R +++ DP GF + P FK+Y + ++PS+ A + G+ P+P A F AARI+ DE+M+ A++H++ +P L+V+LVG+DH+K+ G R RL ++ +V SILLNPTP D+ S++ ++RL+L P+AD+LW+S
Sbjct: 73 SRRGHLQYAAALAGGLLSLPA-LSADAASMQRPTLDL-PPYSLDTSKAFEVKTRSWEQPSSLPVIVTPLSQDERTDALRRWSVRDGNTIVLMGEH-------HNAPEDHRLQAALIAQMEEERQKGSNGKLPPIAIGLEQVQVDFQPILDGYLSGKYTDV-----DLYTKTEWATRWAWPFDAYLPIFQLAKKRGLHLIALNPSTEDTSAVVSSGLEGLGQQARDKFIPDPLGFRDQTRRPGFKMYVDEVVLPSYGYHANAGLLGD-----NPTP---------ANFFAARIVRDEAMAAGAVQHVRDNPGSLMVVLVGSDHVKYTYGCQDRAARLGAFYKLPDF----QVWSILLNPTPIDSVSDSSQMRLALTRG---PFPLPLADYLWYSN 431
BLAST of EWM21311.1 vs. NCBI_GenBank
Match: gi|922854565|gb|KOO23087.1| (iron-regulated protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 156.377 bits (394), Expect = 1.801e-38 Identity = 103/293 (35.15%), Postives = 143/293 (48.81%), Query Frame = 0
Query: 216 PQLQPYTSEGEKAVLRDMARTCNAVFLGEHVEKGGGGQGADEDQTLALRVVEALGKYKPRDASLVLGLEAVQQKFQPALDAYVADTGTDLAAADARLRQETEWDERASVPFEACLPLLHRARGEGIKLLGLGLESEALAKVRQVGLEGLGEEERGRYVADPSGFIQSVKAPAFKLYAERFIMPSFAARAATAVTGEAQGGKGPSPGMTPAPLSAAKFLAARILWDESMSTAAIRHLKTHPKDLVVLLVGADHIKFGLGAPARLERLLRSAEVETAPGRGKVKSILLNPTPADT 508
P ++P T+ + + C AVFLGEH + D L V+ L K + + +GLEAVQ++FQPALD++VA + L + TEW +R PF A P+ R GI LL L ++SE L++V GL L E YV DP GF AFK Y + PS+ + G+ M +S F + R+LWDESM +A+ + +P+ L+V LVG+DH+KFG G PAR R L G V S++LNP P+DT
Sbjct: 80 PTVKPLTA----GTIVKQLQQCRAVFLGEH-------HNSAADHLLQSAVIRELHKERG-SLPMAVGLEAVQRRFQPALDSFVAGR-----IGEVELEEATEWRKRWFWPFAAYAPVFRACRELGIPLLALNVDSEDLSRVEVGGLPALPPETLRSYVTDPEGFSAFAATTAFKEYVAYIVKPSYQMHQRMGILRTTITGQ-----MLDEDMSFRNFFSGRVLWDESMGSASAAWCRNNPEGLLVGLVGSDHVKFGCGVPARCARQLPG-------GLASVASVMLNPLPSDT 343
BLAST of EWM21311.1 vs. NCBI_GenBank
Match: gi|551659719|ref|XP_005832628.1| (hypothetical protein GUITHDRAFT_152654 [Guillardia theta CCMP2712] >gi|428176765|gb|EKX45648.1| hypothetical protein GUITHDRAFT_152654 [Guillardia theta CCMP2712]) HSP 1 Score: 152.525 bits (384), Expect = 1.095e-36 Identity = 96/271 (35.42%), Postives = 144/271 (53.14%), Query Frame = 0
Query: 221 YTSEGEKAV-------LRDMARTCNAVFLGEHVEKGGGGQGADEDQTLALRVVEALGKYKPRDASLVLGLEAVQQKFQPALDAYVADTGTDLAAADARLRQETEWDERASVPFEACLPLLHRARGEGIKLLGLGLESEALAKVRQVGLEGLGEEERGRYVADPSGFIQSVKAPAFKLYAERFIMPSFAARAATAVTGEAQGGKGPSPGMTPAPLSAAKFLAARILWDESMSTAAIRHLKTHPKDLVVLLVGADHIKFGLGAPARLERLLRS 484
+T GE+ V LR ++R NAVF GE + +D+ LA R+++ L + + R +V+GLE VQQ FQ LD YV + +D+ L ++TEW++R F+A LP+L + I LL L +E+E +KV+Q GL L EER R + DP+GF+Q + F Y + PSF A + + F+A RILWDE+M++AA + L +P +V LVG DH+K G PA+++R+LR+
Sbjct: 163 FTFRGEQMVKTNSEGALRYLSRR-NAVFFGE-------SHDSFKDKKLATRILKELHERRGR---VVVGLEMVQQPFQQVLDWYVF-SAVPSKGSDSLLFEKTEWNDRWGWNFKAYLPVLQYCQLHKIPLLALNVEAETTSKVQQQGLVSLSSEERRRLIIDPNGFVQESLSKTFPSYVRSVLKPSFDAHVNMGIYNNDAK-------------TFQNFVANRILWDETMASAAAKFLLKNPDVQLVGLVGGDHVKTNHGIPAKIDRILRN 408
BLAST of EWM21311.1 vs. NCBI_GenBank
Match: gi|546323250|ref|XP_005718026.1| (unnamed protein product [Chondrus crispus] >gi|507114613|emb|CDF38157.1| unnamed protein product [Chondrus crispus]) HSP 1 Score: 144.821 bits (364), Expect = 8.437e-36 Identity = 91/267 (34.08%), Postives = 136/267 (50.94%), Query Frame = 0
Query: 286 VQQKFQPALDAYVADTGTDLAAADARLRQETEWDERASVPFEACLPLLHRARGEGIKLLGLGLESEALAKVR-QVGLEGLGEEERGRYVADPSGFIQSVKAPAFKLYAERFIMPSFAARAATAVTGEAQGGKGPSPGMTPAPLSAAKFLAARILWDESMSTAAIRHLKTHPKDLVVLLVGADHIKFGLGAPARLERLLRSAEVETAPGRG------------KVKSILLNPTPADTGS-ETRRLRLSLGYANNLANCRPVADFLWWS 538
VQQ+FQ ALD +V+ +L L ETEW+ R P+E LP+L R I L+ L L SE L+KV+ + G+E L EE ++ DP+ F+ K PAFK Y I PS+A+ G+ P + A F AR+L DE+M+T ++ ++ +P +++ L+G+DH+KF G AR+E L E R K++S++LNP PAD + L+L + N P+AD+LW+S
Sbjct: 2 VQQRFQDALDRFVSGNLDELG-----LYVETEWETRWVWPYENYLPVLRVCRKYHIPLVALSLNSEVLSKVKAEGGIENLSAEEMRAHIGDPAAFVTISKLPAFKRYISEIITPSYASHYRR--------------GLLPNTANFASFYTARVLRDEAMATCTVQAMQANPDAVMLCLMGSDHVKFEYGVKARIEAQLLGIERRANKAREAEGVSPVLQPPPKLRSVMLNPGPADAYDPRDKSLKLEMAVEGNPV---PIADYLWFS 246
BLAST of EWM21311.1 vs. NCBI_GenBank
Match: gi|676393299|ref|XP_009039927.1| (hypothetical protein AURANDRAFT_72253 [Aureococcus anophagefferens] >gi|323449388|gb|EGB05276.1| hypothetical protein AURANDRAFT_72253 [Aureococcus anophagefferens]) HSP 1 Score: 150.984 bits (380), Expect = 1.199e-34 Identity = 115/283 (40.64%), Postives = 142/283 (50.18%), Query Frame = 0
Query: 239 AVFLGEHVEKGGGGQGADEDQTLALRVVEALGKYKPRDASLVLGLEAVQQKFQPALDAYVADTGTDLAAADARLRQETEWDERASVPFEACLPLLHRARGEGIKLLGLGLESEALAKVRQVGLEGLGEEERGRYVADPSGFIQSVKAPAFKLYAERFIMPSFAARAATAV-----TGEAQGGKGPSPGMTPAPLSAAKFLAARILWDESMSTAAIRHLKTHPKDLVVLLVGADHIKFGLGAPARLERLLRSAEVETAPGRGKVK---SILLNPTPADT-GSET 512
AVFLGEH A D L ++V AL +P L +G EAVQQ+FQPALDAY A ++ RL TEW++R S PFEA P+ A+ LL L ++ E AKV GL GL RGRY+ DP GF K AFK Y I PS+A + T E G S FLA R+LWDE+M++ L + P L V +VGADH+KFG GA RL R L PG +V ++LLNP P+DT G ET
Sbjct: 1135 AVFLGEH-------HDAVADHALQAQLVAALRAAEP-SRPLAVGFEAVQQRFQPALDAYGAGK-----LSERRLAAATEWEQRWSWPFEAYAPVFRAAKAAKADLLALNVDGEDAAKVSAAGLAGLDRAARGRYLPDPQGFAAFAKTVAFKSYVGYAIRPSYALHVELGILPATTTSECVGND------ASCTTSFKNFLANRVLWDEAMASVMETWLASKPGGLAVGVVGADHVKFGCGAANRLARRL--------PGAARVDDVATVLLNPRPSDTRGDET 1390
BLAST of EWM21311.1 vs. NCBI_GenBank
Match: gi|224008805|ref|XP_002293361.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220970761|gb|EED89097.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 143.665 bits (361), Expect = 1.641e-33 Identity = 91/289 (31.49%), Postives = 138/289 (47.75%), Query Frame = 0
Query: 227 KAVLRDMARTCNAVFLGEHVEKGGGGQGADEDQTLALRVVEAL-------GKYKPRDASLVLGLEAVQQKFQPALDAYVADTGTDLAAADARLRQETEWDERASVPFEACLPLLHRARGEGIKLLGLGLESEALAKVRQVGLEGLGEEERGRYVADPSGFIQSVKAPAFKLYAERFIMPSFAARAATAVTGEAQGGKGPSPGMTPAPLSAAKFLAARILWDESMSTAAIRHLKTHPKDLVVLLVGADHIKFGLGAPARLERLLRSAEVETAPGRGKVKSILLNPTPADT 508
K + D + AV+LGEH + D L V A+ G + + +GLE VQ +FQPALDAY+A + +R++ +WD+R S FE LP+ R G+ L+ L ++SE L V G L E+ +Y++D +GF + + FK Y + I PS+ + G+ M P + +F + RILWDESM++ A + + + L+V LVGADH+KF G R +R+ A + S++LNPT DT
Sbjct: 162 KLSMVDTSTQGGAVWLGEH-------HNSVNDHNLQADFVRAIYNQRGESGGNSSSNNKMAVGLEMVQLQFQPALDAYIAK-----KISSDEMRRQVQWDKRWSWSFEGYLPVFETCRKLGVTLIALNVDSEDLGLVESGGFPALPREKMQKYISDTTGFAEFARNRYFKTYVDYVISPSYDLHKQMGILRTTITGQQLEDDM---PFT--RFFSGRILWDESMASNAFKWTEANDGGLLVGLVGADHVKFEGGITGRYKRM--------AGDKYDNISVVLNPTLIDT 425
BLAST of EWM21311.1 vs. NCBI_GenBank
Match: gi|219112557|ref|XP_002178030.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410915|gb|EEC50844.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 142.51 bits (358), Expect = 8.741e-33 Identity = 94/276 (34.06%), Postives = 132/276 (47.83%), Query Frame = 0
Query: 234 ARTCNAVFLGEHVEKGGGGQGADEDQTLALRVVEALGKYKPRDAS-LVLGLEAVQQKFQPALDAYVADTGTDLAAADARLRQETEWDERASVPFEACLPLLHRARGEGIKLLGLGLESEALAKVRQVGLEGLGEEERGRYVADPSGFIQSVKAPAFKLYAERFIMPSFAARAATAVTGEAQGGKGPSPGMTPAPLSAAKFLAARILWDESMSTAAIRHLKTHPKDLVVLLVGADHIKFGLGAPARLERLLRSAEVETAPGRGKVKSILLNPTPADT 508
+R A++LGEH + +D L + ++ + + + S +GLE VQ KFQP L+ Y+A + A +RQ EWD R PFE P+ A+ + L+ L + SE L V + GL GL E +Y++D GF K F Y + I PS+ A + + G+ P+ F + RILWDE+M+ AA K +P L+V LVGADH+KF G P R RL AP S+LLNPT DT
Sbjct: 247 SRNGGALWLGEH-------HNSVKDHNLQVDILRQVHQLRQATGSPTAVGLEQVQIKFQPVLNDYLAGK-----ISAAEMRQRVEWDTRWMWPFEVYEPVFATAKELRMPLVALNVNSEDLVLVEKGGLPGLPSERLRQYISDAPGFAAFAKPREFGTYVDYVIRPSYDLHEAMGLLKYSMSGEK-----LDEPMPFRNFFSGRILWDEAMANAAYSWTKANPGGLLVGLVGADHVKFRNGIPGRYARL--------APNDAACVSVLLNPTLIDT 497 The following BLAST results are available for this feature:
BLAST of EWM21311.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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