EWM21319.1, cds9356 (CDS) Nannochloropsis gaditana

Overview
NameEWM21319.1
Unique Namecds9356
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037253.1:126550..126718 -
Alignment locationKK037253.1:126264..126389 -
Alignment locationKK037253.1:126171..126217 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21319.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100214g3.6234.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:126550..126718 -
KK037253.1supercontigKK037253.1:126264..126389 -
KK037253.1supercontigKK037253.1:126171..126217 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM21319.1 vs. NCBI_GenBank
Match: gi|585101502|gb|EWM21319.1| (hypothetical protein Naga_100214g3 [Nannochloropsis gaditana])

HSP 1 Score: 237.269 bits (604), Expect = 2.741e-79
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 
Query:    1 MYQRYETRTGLVLLFLLRELNISCEGDLTRHSLEISPCQAARLGHDGMNFDFFLLAATESNHVQPNAFLHVFRGLGAWCSGLSHFPRDSKDMQGAFSLDPHCTRHQGHIYSCG 113
            MYQRYETRTGLVLLFLLRELNISCEGDLTRHSLEISPCQAARLGHDGMNFDFFLLAATESNHVQPNAFLHVFRGLGAWCSGLSHFPRDSKDMQGAFSLDPHCTRHQGHIYSCG
Sbjct:    1 MYQRYETRTGLVLLFLLRELNISCEGDLTRHSLEISPCQAARLGHDGMNFDFFLLAATESNHVQPNAFLHVFRGLGAWCSGLSHFPRDSKDMQGAFSLDPHCTRHQGHIYSCG 113
The following BLAST results are available for this feature:
BLAST of EWM21319.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101502|gb|EWM21319.1|2.741e-79100.00hypothetical protein Naga_100214g3 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9386rna9386Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications