EWM21321.1, cds9347 (CDS) Nannochloropsis gaditana

Overview
NameEWM21321.1
Unique Namecds9347
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037253.1:110001..111143 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21321.1
Product26s proteasome non-atpase regulatory subunit 13
Orig transcript idgnl|cribi|Naga_100214g13.6236.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:110001..111143 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR000717PCI_dom
Homology
BLAST of EWM21321.1 vs. NCBI_GenBank
Match: gi|585101504|gb|EWM21321.1| (26s proteasome non-atpase regulatory subunit 13 [Nannochloropsis gaditana])

HSP 1 Score: 771.926 bits (1992), Expect = 0.000e+0
Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 0
Query:    1 MTEYIQTTIAAKPALHEPLSNLGDLHARKLWHQLTIALLSFLKDPNYVQQVDLRALYQNFIVKFEAKLNPLRLAEVAATLSKALLPDVDAARAFLQQFEEKRERYGSEASLFIDMEIVSLKLRQGDVREVEPNLKAAKLVLEGLTGADAMVYSAYYRAASEYHKMVGPPEAFYKNALMYLAYTPVESLTAEEQSTLAVDISLAALTGDGVFNFGEVLSTPILSVLAQGPHAWLSELLHVFDAGDVDRFAALVERHREEYYSQPALVNREEFIKEKVVLLSLINLVFETPSHERTIPFSKVAARGRIGTEQVEWLLMRAMSLGLIKGVIDEVAQEVNVSWVQPRVLNQEQIKQLAVRLEGWGGKVQETLGFVEEQTPELFN 380
            MTEYIQTTIAAKPALHEPLSNLGDLHARKLWHQLTIALLSFLKDPNYVQQVDLRALYQNFIVKFEAKLNPLRLAEVAATLSKALLPDVDAARAFLQQFEEKRERYGSEASLFIDMEIVSLKLRQGDVREVEPNLKAAKLVLEGLTGADAMVYSAYYRAASEYHKMVGPPEAFYKNALMYLAYTPVESLTAEEQSTLAVDISLAALTGDGVFNFGEVLSTPILSVLAQGPHAWLSELLHVFDAGDVDRFAALVERHREEYYSQPALVNREEFIKEKVVLLSLINLVFETPSHERTIPFSKVAARGRIGTEQVEWLLMRAMSLGLIKGVIDEVAQEVNVSWVQPRVLNQEQIKQLAVRLEGWGGKVQETLGFVEEQTPELFN
Sbjct:    1 MTEYIQTTIAAKPALHEPLSNLGDLHARKLWHQLTIALLSFLKDPNYVQQVDLRALYQNFIVKFEAKLNPLRLAEVAATLSKALLPDVDAARAFLQQFEEKRERYGSEASLFIDMEIVSLKLRQGDVREVEPNLKAAKLVLEGLTGADAMVYSAYYRAASEYHKMVGPPEAFYKNALMYLAYTPVESLTAEEQSTLAVDISLAALTGDGVFNFGEVLSTPILSVLAQGPHAWLSELLHVFDAGDVDRFAALVERHREEYYSQPALVNREEFIKEKVVLLSLINLVFETPSHERTIPFSKVAARGRIGTEQVEWLLMRAMSLGLIKGVIDEVAQEVNVSWVQPRVLNQEQIKQLAVRLEGWGGKVQETLGFVEEQTPELFN 380          
BLAST of EWM21321.1 vs. NCBI_GenBank
Match: gi|298710057|emb|CBJ31774.1| (26S proteasome subunit like protein [Ectocarpus siliculosus])

HSP 1 Score: 362.844 bits (930), Expect = 1.873e-120
Identity = 191/379 (50.40%), Postives = 256/379 (67.55%), Query Frame = 0
Query:    3 EYIQTTIAAKPALHEPLSNLGDLHARKLWHQLTIALLSFLKDP-NYVQQVDLRALYQNFIVKFEAKLNPLRLAEVAATLSKALLPDVDAARAFLQQFEEKRERYGSEASLFIDMEIVSLKLRQGDVREVEPNLKAAKLVLEGLTGADAMVYSAYYRAASEYHKMVGPPEAFYKNALMYLAYTPVESLTAEEQSTLAVDISLAALTGDGVFNFGEVLSTPILSVLAQGPHAWLSELLHVFDAGDVDRFAALVERHREEYYSQPALVNREEFIKEKVVLLSLINLVFETPSHERTIPFSKVAARGRIGTEQVEWLLMRAMSLGLIKGVIDEVAQEVNVSWVQPRVLNQEQIKQLAVRLEGWGGKVQETLGFVEEQTPELFN 380
            +YI+      P + +  + LGDL +RKLWHQLT+ALL F+ DP N      L  L   F+  FEAK+N LR  ++   + K     + A + F    E KRER G EASL ++ E+  L LR G V E +  ++  K+ +E L  A+  V+SAYYR +SEY+K VGPP++FY++ALM+LAYTP+E +   E+ TLA DISLAALTG+GVFNFGEVL+TPILS+L   P+AWL  ++  F+ GD+D F  L   ++E   +QPALV+R  F KEK+ LL L+N+VFE  S +R IPF ++AAR ++  +QVEWL+MRAMSL L+KGV+DEV + V+VSWVQPRVL   Q+ +LA RL  W G+V E   +VEEQTPELF 
Sbjct:    2 DYIEQQALQYPDMADKYNKLGDLFSRKLWHQLTVALLEFVSDPANAEAGGGLVRLCTEFVANFEAKMNQLRFVQILCAVGKTCSDPLVATQLFETALE-KRERLGPEASLLLESELGLLVLRAGKVAEAKEVVEKGKVAVEELESAETAVHSAYYRLSSEYYKTVGPPDSFYRSALMFLAYTPLEGIPQAERYTLATDISLAALTGEGVFNFGEVLATPILSMLDGSPNAWLGSMMQAFNMGDIDAFNKLCAENQETMSAQPALVSRATFTKEKIALLCLMNMVFERHSQDRNIPFEEIAARTKLPVDQVEWLVMRAMSLKLVKGVMDEVERLVHVSWVQPRVLEHSQLARLADRLGEWRGRVDEAHVYVEEQTPELFG 379          
BLAST of EWM21321.1 vs. NCBI_GenBank
Match: gi|1214689055|gb|OWZ04767.1| (26S proteasome non-ATPase regulatory protein [Phytophthora megakarya])

HSP 1 Score: 360.147 bits (923), Expect = 2.105e-119
Identity = 186/383 (48.56%), Postives = 259/383 (67.62%), Query Frame = 0
Query:    1 MTEYIQTTIAAKPALHEPLSNLGDLHARKLWHQLTIALLSFLKDP-NYVQQVDLRALYQNFIVKFEAKLNPLRLAEVAATLSKALLPDVDAARAFLQQF-EEKRERYGSEASLFIDMEIVSLKLRQGD--VREVEPNLKAAKLVLEGLTGADAMVYSAYYRAASEYHKMVGPPEAFYKNALMYLAYTPVESLTAEEQSTLAVDISLAALTGDGVFNFGEVLSTPILSVLAQGPHAWLSELLHVFDAGDVDRFAALVERHREEYYSQPALVNREEFIKEKVVLLSLINLVFETPSHERTIPFSKVAARGRIGTEQVEWLLMRAMSLGLIKGVIDEVAQEVNVSWVQPRVLNQEQIKQLAVRLEGWGGKVQETLGFVEEQTPELF 379
            MT++I    AA P + +    L DLH RKL+H+LT  L +F++DP  +   ++L  LYQ FI  F+ KLN +RL  +   +SK    D   A+ F++Q   +   +   EA L   M++  LK R+G   + EV+  +   K V+E L GA+ +V++AYYR A +Y+  +GP + FYKNALM+LAYT  + +  +E+  LAV+IS+AALTGDGVFNFGEVL+TPIL  L      WLS+LLH F+ GD+DRF  +V ++ +E+ +QPALV+++E++KEKV LL+L+ LVF+ PSHER IPF ++A   R+  EQVEWL+MRA+S  LIKG IDEV   V V+WVQPRVL+  Q+++L  RL+GW  KV  TL +VEEQTPELF
Sbjct:    1 MTDFIAKEQAAYPDIAQRYQKLKDLHVRKLYHELTGELEAFVRDPMCHKYPLNLPTLYQEFIRSFQDKLNQIRLVVICTEISKQF-ADPAKAQEFMEQLLGQLSTKTAHEAVLLCKMQLAQLKFRRGTDFLAEVKSTVDDDKQVIESLVGAEPVVHAAYYRVACDYYGALGPADKFYKNALMFLAYTQYDEMRPDERFDLAVNISIAALTGDGVFNFGEVLATPILRALEGTDKQWLSDLLHAFNKGDIDRFNEIVGQNSKEFNAQPALVSKQEYVKEKVALLALMVLVFQRPSHERNIPFHEIAEVTRLPLEQVEWLVMRALSCKLIKGSIDEVDGIVRVTWVQPRVLDNSQLQELVTRLDGWEKKVNSTLVYVEEQTPELF 382          
BLAST of EWM21321.1 vs. NCBI_GenBank
Match: gi|567950158|gb|ETK75876.1| (hypothetical protein L915_17579 [Phytophthora parasitica])

HSP 1 Score: 358.221 bits (918), Expect = 1.370e-118
Identity = 186/383 (48.56%), Postives = 257/383 (67.10%), Query Frame = 0
Query:    1 MTEYIQTTIAAKPALHEPLSNLGDLHARKLWHQLTIALLSFLKDP-NYVQQVDLRALYQNFIVKFEAKLNPLRLAEVAATLSKALLPDVDAARAFLQQF-EEKRERYGSEASLFIDMEIVSLKLRQGD--VREVEPNLKAAKLVLEGLTGADAMVYSAYYRAASEYHKMVGPPEAFYKNALMYLAYTPVESLTAEEQSTLAVDISLAALTGDGVFNFGEVLSTPILSVLAQGPHAWLSELLHVFDAGDVDRFAALVERHREEYYSQPALVNREEFIKEKVVLLSLINLVFETPSHERTIPFSKVAARGRIGTEQVEWLLMRAMSLGLIKGVIDEVAQEVNVSWVQPRVLNQEQIKQLAVRLEGWGGKVQETLGFVEEQTPELF 379
            MT++I    AA P + +    L DLH RKL+H+LT  L +F++DP  +    +L  LYQ FI  F+ KLN +RL  +   +S     D   A+ F++Q   +   +   EA L   M+I  LK R+G   + EV+  +   K V+EGL GA+ +V++AYYR A +Y+  +GP + FYKNALM+LAYT  + +   E+  LAV+IS+AALTGDGVFNFGEVL+TPIL  L      WLS+LLH F+ GD+DRF  +V ++ +E+ +QPALV+++E++KEKV LL+L+ LVF+ PSHER IPF ++A   R+  EQVEWL+MRA+S  LIKG ID+V   V V+WVQPRVL+  Q+++L  RL+GW  KV  TL +VEEQTPELF
Sbjct:    1 MTDFIAKEQAAYPDIAQRYQKLKDLHVRKLYHELTGELEAFVRDPMCHKHPQNLTRLYQEFIRPFQDKLNQIRLVVICTEISTQF-ADPAKAQEFMEQLLGQLSTKTAHEAVLLCKMQIAQLKFRRGADFLAEVKATVDDDKQVIEGLVGAEPVVHAAYYRVACDYYGALGPADKFYKNALMFLAYTQYDEMRLNERFDLAVNISIAALTGDGVFNFGEVLATPILRALEGTDKQWLSDLLHAFNKGDIDRFNEIVGQNSKEFNAQPALVSKQEYVKEKVALLALMVLVFQRPSHERNIPFHEIAEATRLPLEQVEWLVMRALSCKLIKGSIDQVDGIVRVTWVQPRVLDNSQLQELVTRLDGWEKKVNSTLLYVEEQTPELF 382          
BLAST of EWM21321.1 vs. NCBI_GenBank
Match: gi|675207573|ref|XP_008912671.1| (hypothetical protein PPTG_16668 [Phytophthora parasitica INRA-310] >gi|566012725|gb|ETI35636.1| hypothetical protein F443_18057 [Phytophthora parasitica P1569] >gi|567978828|gb|ETL29314.1| hypothetical protein L916_17472 [Phytophthora parasitica] >gi|568008308|gb|ETL82529.1| hypothetical protein L917_17312 [Phytophthora parasitica] >gi|568087115|gb|ETN01990.1| hypothetical protein PPTG_16668 [Phytophthora parasitica INRA-310] >gi|570316423|gb|ETO64371.1| hypothetical protein F444_18081 [Phytophthora parasitica P1976] >gi|570940192|gb|ETP05449.1| hypothetical protein F441_17936 [Phytophthora parasitica CJ01A1] >gi|570970466|gb|ETP33585.1| hypothetical protein F442_17901 [Phytophthora parasitica P10297] >gi|970624277|gb|KUF72227.1| 26S proteasome non-ATPase regulatory subunit 13 [Phytophthora nicotianae] >gi|970648039|gb|KUF87694.1| FACT complex subunit spt16 [Phytophthora nicotianae] >gi|970649693|gb|KUF88900.1| 26S proteasome non-ATPase regulatory subunit 13 [Phytophthora nicotianae])

HSP 1 Score: 357.836 bits (917), Expect = 1.494e-118
Identity = 186/383 (48.56%), Postives = 257/383 (67.10%), Query Frame = 0
Query:    1 MTEYIQTTIAAKPALHEPLSNLGDLHARKLWHQLTIALLSFLKDP-NYVQQVDLRALYQNFIVKFEAKLNPLRLAEVAATLSKALLPDVDAARAFLQQF-EEKRERYGSEASLFIDMEIVSLKLRQGD--VREVEPNLKAAKLVLEGLTGADAMVYSAYYRAASEYHKMVGPPEAFYKNALMYLAYTPVESLTAEEQSTLAVDISLAALTGDGVFNFGEVLSTPILSVLAQGPHAWLSELLHVFDAGDVDRFAALVERHREEYYSQPALVNREEFIKEKVVLLSLINLVFETPSHERTIPFSKVAARGRIGTEQVEWLLMRAMSLGLIKGVIDEVAQEVNVSWVQPRVLNQEQIKQLAVRLEGWGGKVQETLGFVEEQTPELF 379
            MT++I    AA P + +    L DLH RKL+H+LT  L +F++DP  +    +L  LYQ FI  F+ KLN +RL  +   +S     D   A+ F++Q   +   +   EA L   M+I  LK R+G   + EV+  +   K V+EGL GA+ +V++AYYR A +Y+  +GP + FYKNALM+LAYT  + +   E+  LAV+IS+AALTGDGVFNFGEVL+TPIL  L      WLS+LLH F+ GD+DRF  +V ++ +E+ +QPALV+++E++KEKV LL+L+ LVF+ PSHER IPF ++A   R+  EQVEWL+MRA+S  LIKG ID+V   V V+WVQPRVL+  Q+++L  RL+GW  KV  TL +VEEQTPELF
Sbjct:    1 MTDFIAKEQAAYPDIAQRYQKLKDLHVRKLYHELTGELEAFVRDPMCHKHPQNLTRLYQEFIRPFQDKLNQIRLVVICTEISTQF-ADPAKAQEFMEQLLGQLSTKTAHEAVLLCKMQIAQLKFRRGADFLAEVKATVDDDKQVIEGLVGAEPVVHAAYYRVACDYYGALGPADKFYKNALMFLAYTQYDEMRPNERFDLAVNISIAALTGDGVFNFGEVLATPILRALEGTDKQWLSDLLHAFNKGDIDRFNEIVGQNSKEFNAQPALVSKQEYVKEKVALLALMVLVFQRPSHERNIPFHEIAEATRLPLEQVEWLVMRALSCKLIKGSIDQVDGIVRVTWVQPRVLDNSQLQELVTRLDGWEKKVNSTLLYVEEQTPELF 382          
BLAST of EWM21321.1 vs. NCBI_GenBank
Match: gi|301121849|ref|XP_002908651.1| (26S proteasome non-ATPase regulatory subunit 13, putative [Phytophthora infestans T30-4] >gi|262099413|gb|EEY57465.1| 26S proteasome non-ATPase regulatory subunit 13, putative [Phytophthora infestans T30-4])

HSP 1 Score: 356.681 bits (914), Expect = 4.068e-118
Identity = 184/383 (48.04%), Postives = 257/383 (67.10%), Query Frame = 0
Query:    1 MTEYIQTTIAAKPALHEPLSNLGDLHARKLWHQLTIALLSFLKDP-NYVQQVDLRALYQNFIVKFEAKLNPLRLAEVAATLSKALLPDVDAARAFLQQF-EEKRERYGSEASLFIDMEIVSLKLRQGD--VREVEPNLKAAKLVLEGLTGADAMVYSAYYRAASEYHKMVGPPEAFYKNALMYLAYTPVESLTAEEQSTLAVDISLAALTGDGVFNFGEVLSTPILSVLAQGPHAWLSELLHVFDAGDVDRFAALVERHREEYYSQPALVNREEFIKEKVVLLSLINLVFETPSHERTIPFSKVAARGRIGTEQVEWLLMRAMSLGLIKGVIDEVAQEVNVSWVQPRVLNQEQIKQLAVRLEGWGGKVQETLGFVEEQTPELF 379
            MT++I    AA P + +    L DLH RKL+H+LT  L +F++DP  +    +L  LYQ FI  F+ KLN +RL  +   +S     D   A+ F++Q   +   +   EA L   M+I  LK R+G   + +V+  +   K V+EGL GA+ +V++AYYR A +Y+  +GP + FYKNALM+LAYT  + +   E+  LAV+IS+AALTGDGVFNFGEVL+TPIL  L      WLS+LLH F+ GD+DRF  +V ++ +E+ +QPALV+++E++KEKV LL+L+ LVF+ PSHER IPF ++A   R+  EQVEWL+MRA+S  LIKG +D+V   V V+WVQPRVL+  Q+++L  RL+GW  KV  TL +VEEQTPELF
Sbjct:    1 MTDFIAKEQAAYPDIAQRYQKLKDLHVRKLYHELTGELEAFVRDPMCHKHPQNLAKLYQEFIRPFQDKLNQIRLVVICTEISTQF-ADPAKAQEFMEQLLGQLSTKTAHEAVLLCKMQIAQLKFRRGADFLAQVKATVDDDKQVVEGLVGAEPVVHAAYYRVACDYYSALGPADKFYKNALMFLAYTQYDEMRPNERFDLAVNISIAALTGDGVFNFGEVLATPILRALENTDKQWLSDLLHAFNKGDIDRFNEIVGQNSKEFNAQPALVSKQEYVKEKVALLALMVLVFQRPSHERNIPFHEIAEATRLPLEQVEWLVMRALSCKLIKGSLDQVDGIVRVTWVQPRVLDNSQLQELVTRLDGWEKKVNSTLLYVEEQTPELF 382          
BLAST of EWM21321.1 vs. NCBI_GenBank
Match: gi|695390676|ref|XP_009519788.1| (hypothetical protein PHYSODRAFT_554654 [Phytophthora sojae] >gi|348684685|gb|EGZ24500.1| hypothetical protein PHYSODRAFT_554654 [Phytophthora sojae])

HSP 1 Score: 355.525 bits (911), Expect = 1.438e-117
Identity = 184/383 (48.04%), Postives = 258/383 (67.36%), Query Frame = 0
Query:    1 MTEYIQTTIAAKPALHEPLSNLGDLHARKLWHQLTIALLSFLKDP-NYVQQVDLRALYQNFIVKFEAKLNPLRLAEVAATLSKALLPDVDAARAFLQQF-EEKRERYGSEASLFIDMEIVSLKLRQGD--VREVEPNLKAAKLVLEGLTGADAMVYSAYYRAASEYHKMVGPPEAFYKNALMYLAYTPVESLTAEEQSTLAVDISLAALTGDGVFNFGEVLSTPILSVLAQGPHAWLSELLHVFDAGDVDRFAALVERHREEYYSQPALVNREEFIKEKVVLLSLINLVFETPSHERTIPFSKVAARGRIGTEQVEWLLMRAMSLGLIKGVIDEVAQEVNVSWVQPRVLNQEQIKQLAVRLEGWGGKVQETLGFVEEQTPELF 379
            MT++I T  AA P + +    L DLH RKL+H+LT  L +F++DP  +   ++L  LYQ FI  F+ KLN +RL  +   +S     D   A+ F++Q   +   +   EA L   M+I  LK R+G   + EV+  +   K ++E L GA+ +V+++YYR A +Y+  +GP + FYKNALM+LAYT  + +   E+  LAV+IS+AALTGDGVFNFGEVL+TPIL  L      WLS+LLH F+ GD+DRF  +V ++ +E+ +QPALV+++E++KEKV LL+L+ LVF+ PSHER IPF ++A   R+  EQVEWL+MRA+S  LIKG ID+V   V V+WVQPRVL+  Q+++L  RL+GW  KV  TL +VEEQTPELF
Sbjct:    1 MTDFIATEQAAYPDIAQRYQRLKDLHVRKLYHELTGELEAFVRDPACHKYPLNLPKLYQEFIRSFQDKLNQIRLVVICTEISTQF-ADPAKAQEFMEQLLGQLSTKTAHEAVLLCKMQIAQLKFRRGAEFLAEVKATVDDDKQLIESLVGAEPVVHASYYRVACDYYGALGPADKFYKNALMFLAYTQYDEMRPNERFDLAVNISIAALTGDGVFNFGEVLATPILRALEGTDKQWLSDLLHAFNKGDIDRFNEIVGQNSKEFNAQPALVSKQEYVKEKVALLALMVLVFQRPSHERNIPFHEIAEATRLPLEQVEWLVMRALSCKLIKGSIDQVDGIVRVTWVQPRVLDNSQLQELVTRLDGWEKKVNSTLLYVEEQTPELF 382          
BLAST of EWM21321.1 vs. NCBI_GenBank
Match: gi|568038237|gb|ETM35776.1| (hypothetical protein L914_17373 [Phytophthora parasitica])

HSP 1 Score: 355.14 bits (910), Expect = 2.015e-117
Identity = 185/383 (48.30%), Postives = 256/383 (66.84%), Query Frame = 0
Query:    1 MTEYIQTTIAAKPALHEPLSNLGDLHARKLWHQLTIALLSFLKDP-NYVQQVDLRALYQNFIVKFEAKLNPLRLAEVAATLSKALLPDVDAARAFLQQF-EEKRERYGSEASLFIDMEIVSLKLRQGD--VREVEPNLKAAKLVLEGLTGADAMVYSAYYRAASEYHKMVGPPEAFYKNALMYLAYTPVESLTAEEQSTLAVDISLAALTGDGVFNFGEVLSTPILSVLAQGPHAWLSELLHVFDAGDVDRFAALVERHREEYYSQPALVNREEFIKEKVVLLSLINLVFETPSHERTIPFSKVAARGRIGTEQVEWLLMRAMSLGLIKGVIDEVAQEVNVSWVQPRVLNQEQIKQLAVRLEGWGGKVQETLGFVEEQTPELF 379
            MT++I    AA P + +    L DLH RKL+H+LT  L +F++DP  +    +L  LYQ FI  F+ KLN +RL  +   +S     D   A+ F++Q   +   +   EA L   M+I  LK R+G   + EV+  +   K V+EGL GA+ +V++AYYR A +Y+  +GP + FYKNALM+LAYT  + +   E+  LAV+IS+AALTGDGVFNFGEVL+TPIL  L      WLS+LLH F+ GD+DRF  +V ++ + + +QPALV+++E++KEKV LL+L+ LVF+ PSHER IPF ++A   R+  EQVEWL+MRA+S  LIKG ID+V   V V+WVQPRVL+  Q+++L  RL+GW  KV  TL +VEEQTPELF
Sbjct:    1 MTDFIAKEQAAYPDIAQRYQKLKDLHVRKLYHELTGELEAFVRDPMCHKHPQNLTRLYQEFIRPFQDKLNQIRLVVICTEISTQF-ADPAKAQEFMEQLLGQLSTKTAHEAVLLCKMQIAQLKFRRGADFLAEVKATVDDDKQVIEGLVGAEPVVHAAYYRVACDYYGALGPADKFYKNALMFLAYTQYDEMRPNERFDLAVNISIAALTGDGVFNFGEVLATPILRALEGTDKQWLSDLLHAFNKGDIDRFNEIVGQNSKGFNAQPALVSKQEYVKEKVALLALMVLVFQRPSHERNIPFHEIAEATRLPLEQVEWLVMRALSCKLIKGSIDQVDGIVRVTWVQPRVLDNSQLQELVTRLDGWEKKVNSTLLYVEEQTPELF 382          
BLAST of EWM21321.1 vs. NCBI_GenBank
Match: gi|953492174|emb|CEG45424.1| (26s proteasome non-atpase regulatory subunit [Plasmopara halstedii])

HSP 1 Score: 347.436 bits (890), Expect = 2.020e-114
Identity = 182/383 (47.52%), Postives = 257/383 (67.10%), Query Frame = 0
Query:    1 MTEYIQTTIAAKPALHEPLSNLGDLHARKLWHQLTIALLSFLKDP-NYVQQVDLRALYQNFIVKFEAKLNPLRLAEVAATLSKALLPDVDAARAFLQQF-EEKRERYGSEASLFIDMEIVSLKLRQGD--VREVEPNLKAAKLVLEGLTGADAMVYSAYYRAASEYHKMVGPPEAFYKNALMYLAYTPVESLTAEEQSTLAVDISLAALTGDGVFNFGEVLSTPILSVLAQGPHAWLSELLHVFDAGDVDRFAALVERHREEYYSQPALVNREEFIKEKVVLLSLINLVFETPSHERTIPFSKVAARGRIGTEQVEWLLMRAMSLGLIKGVIDEVAQEVNVSWVQPRVLNQEQIKQLAVRLEGWGGKVQETLGFVEEQTPELF 379
            MT++I    AA P + +    L +LH RKL+H+LT  L +F++DP  +   ++L  LY  FI   + KLNP+RL  + + +S A   D   A+ F++Q   +  E+   EA L   M+I  LK  +G   + EV+  +   K V+E L GA+ +V++AYYR A +Y+  +GP + FYKNALM+LAYT    +  +++  LAV+IS+AALTGDGVFNFGEVL+TPIL  L      WLS+LLH F+ GD+DRF  +V ++ +E+ SQPALV+++E++KEKV LL+L+ LVF+ PSHER I F ++A   R+  +QVEWL+MRA+S  LIKG ID+V   V V+WVQPRVL+  Q+++L  RL+GW  KV  TL +VEEQTPELF
Sbjct:    1 MTDFIAKEQAAYPDIAQRYQALENLHVRKLYHELTGELEAFVRDPMCHKYPLNLPKLYHEFIQPIQDKLNPIRLVVICSEIS-AQFADAAKAQEFMEQLLGQLSEKTAHEAVLLCKMQIAQLKFCRGAEFLPEVKATVDDDKPVIEALVGAEPVVHAAYYRVACDYYGALGPADKFYKNALMFLAYTQYNEMRPDQRFDLAVNISIAALTGDGVFNFGEVLATPILRALEGTDKQWLSDLLHAFNKGDIDRFNEIVGQNSKEFNSQPALVSKQEYVKEKVALLALMVLVFQRPSHERNISFHEIAEITRLPLKQVEWLVMRALSCKLIKGSIDQVDGIVRVTWVQPRVLDNSQLQELVTRLDGWEKKVNSTLLYVEEQTPELF 382          
BLAST of EWM21321.1 vs. NCBI_GenBank
Match: gi|813150169|ref|XP_012200731.1| (hypothetical protein SPRG_06526 [Saprolegnia parasitica CBS 223.65] >gi|641534733|gb|KDO28672.1| hypothetical protein SPRG_06526 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 336.65 bits (862), Expect = 5.201e-110
Identity = 175/389 (44.99%), Postives = 245/389 (62.98%), Query Frame = 0
Query:    3 EYIQTTIAAKPALHEPLSNLGDLHARKLWHQLTIALLSFLKDPNYVQQVDLRALYQNFIVKFEAKLNPLRLAEVAATLSKALLPDVDAA---RAFLQQFEEKRERYGS---------EASLFIDMEIVSLKLRQGDVREVEPNLKAAKLVLEGLTGADAMVYSAYYRAASEYHKMVGPPEAFYKNALMYLAYTPVESLTAEEQSTLAVDISLAALTGDGVFNFGEVLSTPILSVLAQGPHAWLSELLHVFDAGDVDRFAALVERHREEYYSQPALVNREEFIKEKVVLLSLINLVFETPSHERTIPFSKVAARGRIGTEQVEWLLMRAMSLGLIKGVIDEVAQEVNVSWVQPRVLNQEQIKQLAVRLEGWGGKVQETLGFVEEQTPELF 379
            ++++   A  PAL    ++LG+L+ RKL+H+LT  LL+F+KD       +   LY  FI  F+ K+N L L  +   ++        A       L     K+    S         E+ L   M + S +LR     EV+  L   K  +EGL GAD +V++AYYR A EY+  VGP + FYK+ALM+LAY+  + +   E+ +LA+++S+AALTG+ VFNFGEVL+TPIL  L      WLS+LLH F+ GD+D+F  +V  HR +Y +QPALVN+E+++KEKV LL+L+ L+F  PS+ER I F+ +AA  R+   QVEWL+MRA+SLGLIKG ID+V   V+V WVQPRVL ++Q+ +L  RL  WG KV ETL +VE+QTPELF
Sbjct:    2 DFLREEQAKYPALAARYASLGELYTRKLYHELTTELLAFVKDETSSVGSNWVDLYTRFIATFQDKINQLSLIRICGEIATRYTEPAQAVAFLNGILTHLHTKKSSVSSYATANPHAIESVLMCRMYMASYQLRLSQTAEVKALLAENKETVEGLVGADPLVHAAYYRVACEYYSAVGPADKFYKSALMFLAYSLYDDIKPAERFSLAINLSVAALTGEDVFNFGEVLATPILGALKGTDKEWLSDLLHAFNRGDIDQFNIIVGNHRAQYNAQPALVNKEDYVKEKVALLALMVLIFHRPSNERNISFADIAAATRLPLNQVEWLVMRALSLGLIKGSIDQVDAVVSVQWVQPRVLEKDQLGELQARLGAWGAKVNETLLYVEDQTPELF 390          
The following BLAST results are available for this feature:
BLAST of EWM21321.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101504|gb|EWM21321.1|0.000e+0100.0026s proteasome non-atpase regulatory subunit 13 [N... [more]
gi|298710057|emb|CBJ31774.1|1.873e-12050.4026S proteasome subunit like protein [Ectocarpus si... [more]
gi|1214689055|gb|OWZ04767.1|2.105e-11948.5626S proteasome non-ATPase regulatory protein [Phyt... [more]
gi|567950158|gb|ETK75876.1|1.370e-11848.56hypothetical protein L915_17579 [Phytophthora para... [more]
gi|675207573|ref|XP_008912671.1|1.494e-11848.56hypothetical protein PPTG_16668 [Phytophthora para... [more]
gi|301121849|ref|XP_002908651.1|4.068e-11848.0426S proteasome non-ATPase regulatory subunit 13, p... [more]
gi|695390676|ref|XP_009519788.1|1.438e-11748.04hypothetical protein PHYSODRAFT_554654 [Phytophtho... [more]
gi|568038237|gb|ETM35776.1|2.015e-11748.30hypothetical protein L914_17373 [Phytophthora para... [more]
gi|953492174|emb|CEG45424.1|2.020e-11447.5226s proteasome non-atpase regulatory subunit [Plas... [more]
gi|813150169|ref|XP_012200731.1|5.201e-11044.99hypothetical protein SPRG_06526 [Saprolegnia paras... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9377rna9377Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications