EWM21329.1, cds9344 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21329.1 vs. NCBI_GenBank
Match: gi|585101513|gb|EWM21329.1| (flagellar outer dynein arm intermediate chain 1 [Nannochloropsis gaditana]) HSP 1 Score: 894.804 bits (2311), Expect = 0.000e+0 Identity = 432/432 (100.00%), Postives = 432/432 (100.00%), Query Frame = 0
Query: 1 MHALPESKGIQTVHSDKLLRSLEMLERILTHNAEDDVYHDFKYFDETSDASRAQGSLLPLWHFTTEKTRRKQVTALVWNPYYNDLFAAGYGSYDFLRQGGGLICCFSLKNTATPQYVFSVEAGVMCLDFHPEHPFLLAVGCYDGSVLVFDVRNKVNAPVYASKVTTGKHTDPVWKVRWQTLEEGLLGGSSSANRELCFLSVAADGQVVAWLLSKNELKMEPLMQLKLIRGCGISSASSGGVRIDLGSGVHVVKRLPRNPELVPRGYLGNLSQLSEETLNHLRWMAQKDRLGQDCFLLGGPGPVRRWLALSYCELAGREVDFMTLSRDTTESDLKQRREILHANALFVDQAPVRAALHGRVLIIEGIERVERNVLPTLNNLLEDRSMALEDGRFIMKSSGYMQLLAAGHSEADLRTRGLLPCHPDFRCYSLFV 432
MHALPESKGIQTVHSDKLLRSLEMLERILTHNAEDDVYHDFKYFDETSDASRAQGSLLPLWHFTTEKTRRKQVTALVWNPYYNDLFAAGYGSYDFLRQGGGLICCFSLKNTATPQYVFSVEAGVMCLDFHPEHPFLLAVGCYDGSVLVFDVRNKVNAPVYASKVTTGKHTDPVWKVRWQTLEEGLLGGSSSANRELCFLSVAADGQVVAWLLSKNELKMEPLMQLKLIRGCGISSASSGGVRIDLGSGVHVVKRLPRNPELVPRGYLGNLSQLSEETLNHLRWMAQKDRLGQDCFLLGGPGPVRRWLALSYCELAGREVDFMTLSRDTTESDLKQRREILHANALFVDQAPVRAALHGRVLIIEGIERVERNVLPTLNNLLEDRSMALEDGRFIMKSSGYMQLLAAGHSEADLRTRGLLPCHPDFRCYSLFV
Sbjct: 1 MHALPESKGIQTVHSDKLLRSLEMLERILTHNAEDDVYHDFKYFDETSDASRAQGSLLPLWHFTTEKTRRKQVTALVWNPYYNDLFAAGYGSYDFLRQGGGLICCFSLKNTATPQYVFSVEAGVMCLDFHPEHPFLLAVGCYDGSVLVFDVRNKVNAPVYASKVTTGKHTDPVWKVRWQTLEEGLLGGSSSANRELCFLSVAADGQVVAWLLSKNELKMEPLMQLKLIRGCGISSASSGGVRIDLGSGVHVVKRLPRNPELVPRGYLGNLSQLSEETLNHLRWMAQKDRLGQDCFLLGGPGPVRRWLALSYCELAGREVDFMTLSRDTTESDLKQRREILHANALFVDQAPVRAALHGRVLIIEGIERVERNVLPTLNNLLEDRSMALEDGRFIMKSSGYMQLLAAGHSEADLRTRGLLPCHPDFRCYSLFV 432
BLAST of EWM21329.1 vs. NCBI_GenBank
Match: gi|673033044|ref|XP_008870483.1| (hypothetical protein H310_06996 [Aphanomyces invadans] >gi|574473345|gb|ETW00348.1| hypothetical protein H310_06996 [Aphanomyces invadans]) HSP 1 Score: 298.13 bits (762), Expect = 8.038e-91 Identity = 130/224 (58.04%), Postives = 178/224 (79.46%), Query Frame = 0
Query: 6 ESKGIQTVHSDKLLRSLEMLERILTHNAEDDVYHDFKYFDETSDASR-AQGSLLPLWHFTTEKTRRKQVTALVWNPYYNDLFAAGYGSYDFLRQGGGLICCFSLKNTATPQYVFSVEAGVMCLDFHPEHPFLLAVGCYDGSVLVFDVRNKVNAPVYASKVTTGKHTDPVWKVRWQTLEEGLLGGSSSANRELCFLSVAADGQVVAWLLSKNELKMEPLMQLKLI 228
++K VHS + + L ++ER++ NAED+++ DFKY+++ SDA R +GSLLPLW F++E+ ++KQVTA+ WNP ++DLFA GYGSYDFL+QG GL+CC+SLKNT+ P+++F+ E+GVMCLDFHP+ P LLAVGCYDG+V+V+DVRNKVN P+Y S + TGKHTDPVW+V WQ EE L +EL F S+++DG+V W++SKNELKMEP+MQLKL+
Sbjct: 255 KNKDDDMVHSAAMGKILRVIERMVNQNAEDEIFQDFKYWEDASDAFRDGEGSLLPLWRFSSERAKKKQVTAVCWNPCFSDLFAVGYGSYDFLKQGSGLVCCYSLKNTSHPEFIFATESGVMCLDFHPQQPALLAVGCYDGTVMVYDVRNKVNRPIYTSTIKTGKHTDPVWQVNWQ--EEDLA-------KELNFFSISSDGRVANWIMSKNELKMEPVMQLKLV 469
BLAST of EWM21329.1 vs. NCBI_GenBank
Match: gi|298711563|emb|CBJ32625.1| (putative, Dynein intermediate chain [Ectocarpus siliculosus]) HSP 1 Score: 295.819 bits (756), Expect = 1.646e-90 Identity = 131/217 (60.37%), Postives = 172/217 (79.26%), Query Frame = 0
Query: 13 VHSDKLLRSLEMLERILTHNAEDDVYHDFKYFDETSDASR-AQGSLLPLWHFTTEKTRRKQVTALVWNPYYNDLFAAGYGSYDFLRQGGGLICCFSLKNTATPQYVFSVEAGVMCLDFHPEHPFLLAVGCYDGSVLVFDVRNKVNAPVYASKVTTGKHTDPVWKVRWQTLEEGLLGGSSSANRELCFLSVAADGQVVAWLLSKNELKMEPLMQLKLI 228
VHS K+ +L++LER++ NAED+++ DFKY+++ SD R +GSLLPLW F+T++T+RKQVTAL WNP Y DLFAA YGSYDF+RQG G++CCFSLKNT+ P+Y F E+GVMCLDFHP H LLAVGC+DG+V+VFDVR+K N P+Y+S + TGKHTDPVW+V WQ S +EL F S+++DG+V +W++SKNELKMEP+MQLKL+
Sbjct: 202 VHSAKMGGALKILERMVNQNAEDEIFQDFKYWEDASDHFREGEGSLLPLWRFSTDRTKRKQVTALAWNPQYPDLFAAAYGSYDFMRQGSGMVCCFSLKNTSHPEYTFGTESGVMCLDFHPVHNSLLAVGCHDGTVMVFDVRHKANRPIYSSSIKTGKHTDPVWQVYWQ---------SDDQPKELNFFSISSDGRVASWVMSKNELKMEPVMQLKLV 409
BLAST of EWM21329.1 vs. NCBI_GenBank
Match: gi|698818163|ref|XP_009842110.1| (hypothetical protein H257_15640 [Aphanomyces astaci] >gi|574102938|gb|ETV68484.1| hypothetical protein H257_15640 [Aphanomyces astaci]) HSP 1 Score: 295.434 bits (755), Expect = 9.363e-90 Identity = 128/224 (57.14%), Postives = 177/224 (79.02%), Query Frame = 0
Query: 6 ESKGIQTVHSDKLLRSLEMLERILTHNAEDDVYHDFKYFDETSDASR-AQGSLLPLWHFTTEKTRRKQVTALVWNPYYNDLFAAGYGSYDFLRQGGGLICCFSLKNTATPQYVFSVEAGVMCLDFHPEHPFLLAVGCYDGSVLVFDVRNKVNAPVYASKVTTGKHTDPVWKVRWQTLEEGLLGGSSSANRELCFLSVAADGQVVAWLLSKNELKMEPLMQLKLI 228
++K VHS + + L ++ER++ NAED+++ DFKY+++ SDA R +GSLLPLW F++E+ ++KQVTA+ WNP ++DLFA GYGSYDFL+QG GL+CC+SLKNT+ P+++F+ E+GV CLDFHP+ P LLAVGCYDG+V+V+DVRNK+N P+Y S + TGKHTDPVW+V WQ EE L +EL F S+++DG+V W++SKNELKMEP+MQLKL+
Sbjct: 255 KNKDDDMVHSAAMGKILRVIERMVNQNAEDEIFQDFKYWEDASDAFRDGEGSLLPLWRFSSERAKKKQVTAVCWNPCFSDLFAVGYGSYDFLKQGSGLVCCYSLKNTSHPEFIFATESGVTCLDFHPQQPALLAVGCYDGTVMVYDVRNKINRPIYTSTIKTGKHTDPVWQVNWQ--EEDLA-------KELNFFSISSDGRVANWIMSKNELKMEPVMQLKLV 469
BLAST of EWM21329.1 vs. NCBI_GenBank
Match: gi|676392607|ref|XP_009039581.1| (hypothetical protein AURANDRAFT_30500 [Aureococcus anophagefferens] >gi|323449857|gb|EGB05742.1| hypothetical protein AURANDRAFT_30500 [Aureococcus anophagefferens]) HSP 1 Score: 293.893 bits (751), Expect = 1.058e-89 Identity = 133/223 (59.64%), Postives = 175/223 (78.48%), Query Frame = 0
Query: 7 SKGIQTVHSDKLLRSLEMLERILTHNAEDDVYHDFKYFDETSDASR-AQGSLLPLWHFTTEKTRRKQVTALVWNPYYNDLFAAGYGSYDFLRQGGGLICCFSLKNTATPQYVFSVEAGVMCLDFHPEHPFLLAVGCYDGSVLVFDVRNKVNAPVYASKVTTGKHTDPVWKVRWQTLEEGLLGGSSSANRELCFLSVAADGQVVAWLLSKNELKMEPLMQLKLI 228
SK VHS ++ +L++LER++ NA+D+++ DFKY+++ SDA R +GSLLPLW F TE+++RKQVTAL WNP Y DLF+ GYGSYDF+RQG G++CCFSLKNT+ P+Y F+ E+GVMCL+FHPEH LLAVGCYDG V+V+DVR+K N P+YAS + TGKHTDPVW+V+WQ E L +EL F S+++DG+V W +SKNELKMEP+MQLKL+
Sbjct: 203 SKEDDMVHSQRMGNALKILERMVNQNADDEIFQDFKYWEDASDAFRDGEGSLLPLWRFHTERSKRKQVTALAWNPKYPDLFSVGYGSYDFMRQGSGMVCCFSLKNTSYPEYTFTTESGVMCLNFHPEHCSLLAVGCYDGIVMVYDVRHKGNRPIYASSIKTGKHTDPVWQVQWQI--EDLA-------KELNFFSISSDGRVANWTMSKNELKMEPVMQLKLV 416
BLAST of EWM21329.1 vs. NCBI_GenBank
Match: gi|669167929|ref|XP_008619493.1| (hypothetical protein SDRG_15107 [Saprolegnia diclina VS20] >gi|530728857|gb|EQC27099.1| hypothetical protein SDRG_15107 [Saprolegnia diclina VS20]) HSP 1 Score: 295.434 bits (755), Expect = 1.217e-89 Identity = 129/224 (57.59%), Postives = 177/224 (79.02%), Query Frame = 0
Query: 6 ESKGIQTVHSDKLLRSLEMLERILTHNAEDDVYHDFKYFDETSDASR-AQGSLLPLWHFTTEKTRRKQVTALVWNPYYNDLFAAGYGSYDFLRQGGGLICCFSLKNTATPQYVFSVEAGVMCLDFHPEHPFLLAVGCYDGSVLVFDVRNKVNAPVYASKVTTGKHTDPVWKVRWQTLEEGLLGGSSSANRELCFLSVAADGQVVAWLLSKNELKMEPLMQLKLI 228
++K VHS + + L ++ER++ NAED+++ DFKY+++ SDA R +GSLLPLW F +++ ++KQVTA+ WNP ++DLFA GYGSYDFL+QG GL+CC++LKNT+ P+++F+ E+GVMCLDFHP+ P LLAVGCYDG+VLV+DVRNKVN P+Y S + TGKHTDPVW+V WQ EE L +EL F S+++DG+V W++SKNELKMEP+MQLKL+
Sbjct: 263 KNKDDDMVHSAAMGKILRVIERMVNQNAEDEIFQDFKYWEDASDAFREGEGSLLPLWRFASDRAKKKQVTAVCWNPCFSDLFAVGYGSYDFLKQGSGLVCCYTLKNTSHPEFIFATESGVMCLDFHPQQPALLAVGCYDGTVLVYDVRNKVNRPIYTSTIKTGKHTDPVWQVNWQ--EEDLA-------KELNFFSISSDGRVANWIMSKNELKMEPVMQLKLV 477
BLAST of EWM21329.1 vs. NCBI_GenBank
Match: gi|1173935774|gb|OQR86840.1| (dynein intermediate chain 2, partial [Thraustotheca clavata]) HSP 1 Score: 293.123 bits (749), Expect = 1.655e-89 Identity = 128/224 (57.14%), Postives = 176/224 (78.57%), Query Frame = 0
Query: 6 ESKGIQTVHSDKLLRSLEMLERILTHNAEDDVYHDFKYFDETSDASR-AQGSLLPLWHFTTEKTRRKQVTALVWNPYYNDLFAAGYGSYDFLRQGGGLICCFSLKNTATPQYVFSVEAGVMCLDFHPEHPFLLAVGCYDGSVLVFDVRNKVNAPVYASKVTTGKHTDPVWKVRWQTLEEGLLGGSSSANRELCFLSVAADGQVVAWLLSKNELKMEPLMQLKLI 228
++K VHS + + L ++ER++ NAED+++ DFKY+++ SDA R +GSLLPLW F E+ ++KQVTA+ WNP ++DLFA GYGSY+FL+Q GL+CC++LKNT+ P+++F+ E+GVMCLDFHP+ P LLAVGCYDG+V+V+DVRNKVN P+YAS + TGKHTDPVW+V WQ EE L +EL F S+++DG+V W++SKNELKMEP+MQLKL+
Sbjct: 266 KNKDDDMVHSAAMGKILRVIERMVNQNAEDEIFQDFKYWEDASDAFREGEGSLLPLWRFAAERAKKKQVTAVCWNPCFSDLFAVGYGSYEFLKQSSGLVCCYTLKNTSHPEFIFATESGVMCLDFHPQQPALLAVGCYDGTVMVYDVRNKVNRPIYASTIKTGKHTDPVWQVNWQ--EEDLA-------KELNFFSISSDGRVANWIMSKNELKMEPVMQLKLV 480
BLAST of EWM21329.1 vs. NCBI_GenBank
Match: gi|325180294|emb|CCA14697.1| (dynein intermediate chain 2 putative [Albugo laibachii Nc14]) HSP 1 Score: 291.967 bits (746), Expect = 2.186e-88 Identity = 125/217 (57.60%), Postives = 173/217 (79.72%), Query Frame = 0
Query: 13 VHSDKLLRSLEMLERILTHNAEDDVYHDFKYFDETSDASR-AQGSLLPLWHFTTEKTRRKQVTALVWNPYYNDLFAAGYGSYDFLRQGGGLICCFSLKNTATPQYVFSVEAGVMCLDFHPEHPFLLAVGCYDGSVLVFDVRNKVNAPVYASKVTTGKHTDPVWKVRWQTLEEGLLGGSSSANRELCFLSVAADGQVVAWLLSKNELKMEPLMQLKLI 228
V+S + ++L ++ R+L NAED+++ DFKY+++ SD R +GSLLPLW F+++++R+KQVTA+ WNP ++DLFA GYGSYDFL+QG G++CC+SLKN++ P+Y F+ ++GV CLDFHP+HP LLAVGCYDGSVLV+DVRNKVN P Y S + TGKHTDPVW++ WQ EE L ++EL F S++ DG+V W++SKNELKMEP+MQLK++
Sbjct: 235 VYSAGMSKTLRIVARMLNQNAEDEIFQDFKYWEDASDQFREGEGSLLPLWRFSSDRSRKKQVTAISWNPRFSDLFAVGYGSYDFLKQGSGVVCCYSLKNSSHPEYTFTTDSGVFCLDFHPQHPALLAVGCYDGSVLVYDVRNKVNKPFYVSTIKTGKHTDPVWQITWQ--EEDL-------SKELAFYSISTDGRVANWIMSKNELKMEPMMQLKVV 442
BLAST of EWM21329.1 vs. NCBI_GenBank
Match: gi|813184496|ref|XP_012206420.1| (hypothetical protein SPRG_12000 [Saprolegnia parasitica CBS 223.65] >gi|641528650|gb|KDO22863.1| hypothetical protein SPRG_12000 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 291.582 bits (745), Expect = 2.666e-88 Identity = 126/208 (60.58%), Postives = 169/208 (81.25%), Query Frame = 0
Query: 22 LEMLERILTHNAEDDVYHDFKYFDETSDASR-AQGSLLPLWHFTTEKTRRKQVTALVWNPYYNDLFAAGYGSYDFLRQGGGLICCFSLKNTATPQYVFSVEAGVMCLDFHPEHPFLLAVGCYDGSVLVFDVRNKVNAPVYASKVTTGKHTDPVWKVRWQTLEEGLLGGSSSANRELCFLSVAADGQVVAWLLSKNELKMEPLMQLKLI 228
L ++ER++ NAED+++ DFKY+++ SDA R +GSLLPLW F +E+ ++KQVTA+ WNP ++DLFA GYGSYDFL+QG GL+CC++LKNT+ P+++F+ E+GVMCLDFHP+ P LLAVGCYDG+VLV+DVRNKVN P+Y S + TGKHTDPVW+V WQ EE L +EL F S+++DG+V W++SKNELKMEP+MQLKL+
Sbjct: 264 LRVIERMVNQNAEDEIFQDFKYWEDASDAFREGEGSLLPLWRFASERAKKKQVTAVCWNPCFSDLFAVGYGSYDFLKQGSGLVCCYTLKNTSHPEFIFATESGVMCLDFHPQQPALLAVGCYDGTVLVYDVRNKVNRPIYTSTIKTGKHTDPVWQVNWQ--EEDLA-------KELNFFSISSDGRVANWIMSKNELKMEPVMQLKLV 462
BLAST of EWM21329.1 vs. NCBI_GenBank
Match: gi|1173937407|gb|OQR88215.1| (dynein intermediate chain 2 [Achlya hypogyna]) HSP 1 Score: 289.271 bits (739), Expect = 3.170e-87 Identity = 129/224 (57.59%), Postives = 174/224 (77.68%), Query Frame = 0
Query: 6 ESKGIQTVHSDKLLRSLEMLERILTHNAEDDVYHDFKYFDETSDASR-AQGSLLPLWHFTTEKTRRKQVTALVWNPYYNDLFAAGYGSYDFLRQGGGLICCFSLKNTATPQYVFSVEAGVMCLDFHPEHPFLLAVGCYDGSVLVFDVRNKVNAPVYASKVTTGKHTDPVWKVRWQTLEEGLLGGSSSANRELCFLSVAADGQVVAWLLSKNELKMEPLMQLKLI 228
++K VHS + L ++ER++ NAED+++ DFKY+++ SDA R +GSLLPLW F +E+ ++KQVTA+ WNP + DLFA GYGSY+FL+QG GL+CC++LKNT+ ++ F+ E+GVMCLDFHP+ P LLAVGCYDG+VLV+DVRNKVN P+YAS + TGKHTDPVW+V WQ EE L +EL F S+++DG+V W++SKNELKMEP+MQLKL+
Sbjct: 263 KAKDDDMVHSAAMGMILRVVERMVNQNAEDEIFQDFKYWEDASDAFREGEGSLLPLWRFASERAKKKQVTAVCWNPCFADLFAVGYGSYEFLKQGSGLVCCYTLKNTSHAEFTFATESGVMCLDFHPQQPALLAVGCYDGTVLVYDVRNKVNRPIYASTIKTGKHTDPVWQVYWQ--EEDLA-------KELNFFSISSDGRVANWIMSKNELKMEPVMQLKLV 477 The following BLAST results are available for this feature:
BLAST of EWM21329.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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