EWM21330.1, cds9343 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21330.1 vs. NCBI_GenBank
Match: gi|585101514|gb|EWM21330.1| (ATPase AAA superfamily protein [Nannochloropsis gaditana]) HSP 1 Score: 557.755 bits (1436), Expect = 0.000e+0 Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0
Query: 1 MHETLMTAFATGQVREVVEDVLQRAGLSMPSKGSRRTPDSKSNGSPSALTIETTPDTVRIGDVSAPRCRAQQRELVPNPTPFFDNPRHVQLLQRLLVDWIAGEKAILLVGNQGVGKNKLVDRLLQLLDAEREYIQLHRDTTLHSLTLVPALIDGRITYEDSPLIRAVEQGRVLVVDEADKAPAEVVLVLKGLLEDGYLLLPDGRKVMAGTDREEERREGRHPHSPRLPDDRACEQARVSVLRKRFLRDGGDAGDLGSGVSVAGHPLDVGAGGGGKKWKL 279
MHETLMTAFATGQVREVVEDVLQRAGLSMPSKGSRRTPDSKSNGSPSALTIETTPDTVRIGDVSAPRCRAQQRELVPNPTPFFDNPRHVQLLQRLLVDWIAGEKAILLVGNQGVGKNKLVDRLLQLLDAEREYIQLHRDTTLHSLTLVPALIDGRITYEDSPLIRAVEQGRVLVVDEADKAPAEVVLVLKGLLEDGYLLLPDGRKVMAGTDREEERREGRHPHSPRLPDDRACEQARVSVLRKRFLRDGGDAGDLGSGVSVAGHPLDVGAGGGGKKWKL
Sbjct: 1 MHETLMTAFATGQVREVVEDVLQRAGLSMPSKGSRRTPDSKSNGSPSALTIETTPDTVRIGDVSAPRCRAQQRELVPNPTPFFDNPRHVQLLQRLLVDWIAGEKAILLVGNQGVGKNKLVDRLLQLLDAEREYIQLHRDTTLHSLTLVPALIDGRITYEDSPLIRAVEQGRVLVVDEADKAPAEVVLVLKGLLEDGYLLLPDGRKVMAGTDREEERREGRHPHSPRLPDDRACEQARVSVLRKRFLRDGGDAGDLGSGVSVAGHPLDVGAGGGGKKWKL 279
BLAST of EWM21330.1 vs. NCBI_GenBank
Match: gi|1173930530|gb|OQR83325.1| (hypothetical protein ACHHYP_14843 [Achlya hypogyna]) HSP 1 Score: 201.445 bits (511), Expect = 5.314e-55 Identity = 107/208 (51.44%), Postives = 145/208 (69.71%), Query Frame = 0
Query: 1 MHETLMTAFATGQVREVVEDVLQRAGLSMPSKGSRRTPDSKSNGSPSALTIETTPDTVRIGDVSAPRCRAQQR-ELVPNPTPFFDNPRHVQLLQRLLVDWIAGEKAILLVGNQGVGKNKLVDRLLQLLDAEREYIQLHRDTTLHSLTLVPALIDGRITYEDSPLIRAVEQGRVLVVDEADKAPAEVVLVLKGLLEDGYLLLPDGRKVM 207
+H+T+MT F + L S P+ + D + A+ I PD++ IG+V+ P R R ELVP P ++D P+H +++Q++L D +AG++ +LL+GNQGVGKNK+VDRLLQL+ EREYIQLHRDTT+ +LTLVP L GRI +EDSPL+RAV++GR LVVDEADKAP EVV VLKGL+EDG +LL DGR+++
Sbjct: 623 VHDTMMTQFVGPAQAAAIRRALGAVHSSPPANTASSAVDIDT-----AVAIVAAPDSLTIGNVTYPITRPPARPELVPQPL-YYDIPKHTRVMQQVLQDIVAGQRHLLLIGNQGVGKNKVVDRLLQLMQQEREYIQLHRDTTVQTLTLVPTLEGGRIRWEDSPLVRAVKEGRTLVVDEADKAPLEVVCVLKGLIEDGEMLLGDGRRIL 824 HSP 2 Score: 63.929 bits (154), Expect = 7.658e-8 Identity = 51/157 (32.48%), Postives = 77/157 (49.04%), Query Frame = 0
Query: 57 TVRIGDVSAPRCRAQQRELVPNPTPFFDNPRHVQLLQRLL--VDWIAG----EKAILLVGNQGVGKNKLVDRLLQLLDAEREYIQLHRDTTLHSLTLVPALIDGRITYEDSPLIRAVEQGRVLVVDEADKAPAEVVLVLKGLLEDGYLLLPDGRKVM 207
TV IG +S P+ A + LVP T F + QL Q L + W+ E+ + L+G G + L + +LL E EY+ + +DTT L + G + D +RA GR+L++D +KA V+ L LLE+ + L DGR +M
Sbjct: 24 TVSIGGISVPKAIASEPHLVP--TGFVPS----QLSQESLGHLRWMLQKDLLEQDMFLIGPPGPARRHLALQFAELLHREVEYVAISQDTTESDLKQRREIACGAAVFTDQAPVRAAIHGRLLILDGLEKAERNVLPTLNNLLENREMALEDGRFLM 174
BLAST of EWM21330.1 vs. NCBI_GenBank
Match: gi|695374160|ref|XP_009515224.1| (hypothetical protein PHYSODRAFT_308938 [Phytophthora sojae] >gi|348688135|gb|EGZ27949.1| hypothetical protein PHYSODRAFT_308938 [Phytophthora sojae]) HSP 1 Score: 201.445 bits (511), Expect = 5.933e-55 Identity = 106/214 (49.53%), Postives = 143/214 (66.82%), Query Frame = 0
Query: 1 MHETLMTAFATGQVREVVEDVLQRAGLSMPSKGSRRTPDSKSNGSPSALTIETTPDTVR-------IGDVSAPRCRAQQRELVPNPTPFFDNPRHVQLLQRLLVDWIAGEKAILLVGNQGVGKNKLVDRLLQLLDAEREYIQLHRDTTLHSLTLVPALIDGRITYEDSPLIRAVEQGRVLVVDEADKAPAEVVLVLKGLLEDGYLLLPDGRKVM 207
+H+TL+T F + +V+ +L + ++ + SPS + PDT+R IGD S P ELVP P +FD P+H Q ++ +L D +AG+K +LL+GNQGVGKNKL DRLLQLL EREYIQLHRDTT+ +LTLVP L+DG+I +EDSPL+RA + GR L+VDEADKAP EVV VLKGL+EDG +LL +G++++
Sbjct: 621 LHDTLLTQFLSSSCSRLVDTLLDKC-------------NAPATLSPSDTLNQREPDTIREERGRLCIGDTSYPIQTPNSPELVPQPH-YFDIPKHTQCMKAMLQDVVAGQKHMLLIGNQGVGKNKLADRLLQLLQQEREYIQLHRDTTVQTLTLVPTLLDGKIEWEDSPLVRAAKTGRTLIVDEADKAPLEVVCVLKGLIEDGEMLLGNGKRLI 820
BLAST of EWM21330.1 vs. NCBI_GenBank
Match: gi|675202297|ref|XP_008910033.1| (hypothetical protein, variant [Phytophthora parasitica INRA-310] >gi|568089799|gb|ETN04639.1| hypothetical protein, variant [Phytophthora parasitica INRA-310]) HSP 1 Score: 195.667 bits (496), Expect = 4.961e-53 Identity = 104/210 (49.52%), Postives = 141/210 (67.14%), Query Frame = 0
Query: 1 MHETLMTAFATGQVREVVEDVLQRAGLSMPSKGSRRTPDSKSNGSPSALTIETTPDTVRIGDVSAPRCRAQQRELVPNPTPFFDNPRHVQLLQRLLVDWIAGEKAILLVGNQGVGKNKLVDRLLQLLDAEREYIQLHRDTTLHSLTLVPALIDGRITYEDSPLIRAVEQGRVLVVDEADKAPAEVVLVLKGLLEDGYLLLPDGRKVMAGT 210
+H+TL+T F + +V+ +L + + + + DS+ + TI + IGDVS P ELVP P +FD P H ++ +L D +AG+K +LL+GNQGVGKNKL DRLLQLL EREYIQLHRDTT+ +LTLVP L+DG+I +EDSPL+RA + GR L+VDEADKAP EVV VLKGL+EDG +LL +G++++ T
Sbjct: 583 LHDTLLTQFLSSACNRLVDSLLDECKVPVSTLAT----DSQKLQTE---TIHEEGGLLHIGDVSYPIQTPSNSELVPQPH-YFDIPNHTLCMKDMLQDVVAGQKHLLLIGNQGVGKNKLADRLLQLLQQEREYIQLHRDTTVQTLTLVPTLVDGKIEWEDSPLVRAAKTGRTLIVDEADKAPLEVVCVLKGLIEDGEMLLGNGKRLIDST 784
BLAST of EWM21330.1 vs. NCBI_GenBank
Match: gi|675202295|ref|XP_008910032.1| (hypothetical protein PPTG_14469 [Phytophthora parasitica INRA-310] >gi|568089798|gb|ETN04638.1| hypothetical protein PPTG_14469 [Phytophthora parasitica INRA-310]) HSP 1 Score: 195.667 bits (496), Expect = 5.143e-53 Identity = 104/210 (49.52%), Postives = 141/210 (67.14%), Query Frame = 0
Query: 1 MHETLMTAFATGQVREVVEDVLQRAGLSMPSKGSRRTPDSKSNGSPSALTIETTPDTVRIGDVSAPRCRAQQRELVPNPTPFFDNPRHVQLLQRLLVDWIAGEKAILLVGNQGVGKNKLVDRLLQLLDAEREYIQLHRDTTLHSLTLVPALIDGRITYEDSPLIRAVEQGRVLVVDEADKAPAEVVLVLKGLLEDGYLLLPDGRKVMAGT 210
+H+TL+T F + +V+ +L + + + + DS+ + TI + IGDVS P ELVP P +FD P H ++ +L D +AG+K +LL+GNQGVGKNKL DRLLQLL EREYIQLHRDTT+ +LTLVP L+DG+I +EDSPL+RA + GR L+VDEADKAP EVV VLKGL+EDG +LL +G++++ T
Sbjct: 691 LHDTLLTQFLSSACNRLVDSLLDECKVPVSTLAT----DSQKLQTE---TIHEEGGLLHIGDVSYPIQTPSNSELVPQPH-YFDIPNHTLCMKDMLQDVVAGQKHLLLIGNQGVGKNKLADRLLQLLQQEREYIQLHRDTTVQTLTLVPTLVDGKIEWEDSPLVRAAKTGRTLIVDEADKAPLEVVCVLKGLIEDGEMLLGNGKRLIDST 892 HSP 2 Score: 64.3142 bits (155), Expect = 5.858e-8 Identity = 53/160 (33.12%), Postives = 76/160 (47.50%), Query Frame = 0
Query: 55 PDTVRIGDVSAPRCRAQQRELVPN--PTPFFDN-PRHVQLLQRLLVDWIAGE----KAILLVGNQGVGKNKLVDRLLQLLDAEREYIQLHRDTTLHSLTLVPALIDGRITYEDSPLIRAVEQGRVLVVDEADKAPAEVVLVLKGLLEDGYLLLPDGRKVM 207
P V IG V AP ELVP T P +LL L W+ + + + L+G G + L + +LL E EY+ + +DTT L ++DG + D +RA GRVLV+D +KA V+ L LLE+ ++L DGR +M
Sbjct: 38 PLEVEIGGVKAPVGSPTSVELVPRGYVTELQQRRPMSQELLSHL--RWMLQKDLLKQDMFLIGPPGSSRRLLSMQFCELLKKEVEYVAISQDTTESDLKQRREIVDGAAIFTDQAPVRAAINGRVLVIDGLEKAERNVLPTLNNLLENREMMLDDGRFLM 195
BLAST of EWM21330.1 vs. NCBI_GenBank
Match: gi|970634079|gb|KUF79472.1| (von Willebrand factor A domain-containing protein 8 [Phytophthora nicotianae]) HSP 1 Score: 195.667 bits (496), Expect = 5.609e-53 Identity = 104/210 (49.52%), Postives = 141/210 (67.14%), Query Frame = 0
Query: 1 MHETLMTAFATGQVREVVEDVLQRAGLSMPSKGSRRTPDSKSNGSPSALTIETTPDTVRIGDVSAPRCRAQQRELVPNPTPFFDNPRHVQLLQRLLVDWIAGEKAILLVGNQGVGKNKLVDRLLQLLDAEREYIQLHRDTTLHSLTLVPALIDGRITYEDSPLIRAVEQGRVLVVDEADKAPAEVVLVLKGLLEDGYLLLPDGRKVMAGT 210
+H+TL+T F + +V+ +L + + + + DS+ + TI + IGDVS P ELVP P +FD P H ++ +L D +AG+K +LL+GNQGVGKNKL DRLLQLL EREYIQLHRDTT+ +LTLVP L+DG+I +EDSPL+RA + GR L+VDEADKAP EVV VLKGL+EDG +LL +G++++ T
Sbjct: 692 LHDTLLTQFLSSACNRLVDSLLDECKVPVSTLAT----DSQKLQTE---TIHEEGGLLHIGDVSYPIQTPSNXELVPQPH-YFDIPNHTLCMKDMLQDVVAGQKHLLLIGNQGVGKNKLADRLLQLLQQEREYIQLHRDTTVQTLTLVPTLVDGKIEWEDSPLVRAAKTGRTLIVDEADKAPLEVVCVLKGLIEDGEMLLGNGKRLIDST 893 HSP 2 Score: 64.3142 bits (155), Expect = 5.967e-8 Identity = 53/160 (33.12%), Postives = 76/160 (47.50%), Query Frame = 0
Query: 55 PDTVRIGDVSAPRCRAQQRELVPN--PTPFFDN-PRHVQLLQRLLVDWIAGE----KAILLVGNQGVGKNKLVDRLLQLLDAEREYIQLHRDTTLHSLTLVPALIDGRITYEDSPLIRAVEQGRVLVVDEADKAPAEVVLVLKGLLEDGYLLLPDGRKVM 207
P V IG V AP ELVP T P +LL L W+ + + + L+G G + L + +LL E EY+ + +DTT L ++DG + D +RA GRVLV+D +KA V+ L LLE+ ++L DGR +M
Sbjct: 38 PLEVEIGGVKAPVGSPTSVELVPRGYVTELQQRRPMSQELLSHL--RWMLQKDLLKQDMFLIGPPGSSRRLLSMQFCELLKKEVEYVAISQDTTESDLKQRREIVDGAAIFTDQAPVRAAINGRVLVIDGLEKAERNVLPTLNNLLENREMMLDDGRFLM 195
BLAST of EWM21330.1 vs. NCBI_GenBank
Match: gi|568012759|gb|ETL86936.1| (hypothetical protein, variant [Phytophthora parasitica]) HSP 1 Score: 195.282 bits (495), Expect = 9.012e-53 Identity = 104/210 (49.52%), Postives = 141/210 (67.14%), Query Frame = 0
Query: 1 MHETLMTAFATGQVREVVEDVLQRAGLSMPSKGSRRTPDSKSNGSPSALTIETTPDTVRIGDVSAPRCRAQQRELVPNPTPFFDNPRHVQLLQRLLVDWIAGEKAILLVGNQGVGKNKLVDRLLQLLDAEREYIQLHRDTTLHSLTLVPALIDGRITYEDSPLIRAVEQGRVLVVDEADKAPAEVVLVLKGLLEDGYLLLPDGRKVMAGT 210
+H+TL+T F + +V+ +L + + + + DS+ + TI + IGDVS P ELVP P +FD P H ++ +L D +AG+K +LL+GNQGVGKNKL DRLLQLL EREYIQLHRDTT+ +LTLVP L+DG+I +EDSPL+RA + GR L+VDEADKAP EVV VLKGL+EDG +LL +G++++ T
Sbjct: 583 LHDTLLTQFLSSACNRLVDSLLDECKVPVSTLAT----DSQKLQTE---TIHEEGGLLHIGDVSYPIQTPSNPELVPQPH-YFDIPNHTLCMKDMLQDVVAGQKHLLLIGNQGVGKNKLADRLLQLLQQEREYIQLHRDTTVQTLTLVPTLVDGKIEWEDSPLVRAAKTGRTLIVDEADKAPLEVVCVLKGLIEDGEMLLGNGKRLIDST 784
BLAST of EWM21330.1 vs. NCBI_GenBank
Match: gi|566017183|gb|ETI40094.1| (hypothetical protein, variant [Phytophthora parasitica P1569]) HSP 1 Score: 194.897 bits (494), Expect = 9.456e-53 Identity = 104/210 (49.52%), Postives = 141/210 (67.14%), Query Frame = 0
Query: 1 MHETLMTAFATGQVREVVEDVLQRAGLSMPSKGSRRTPDSKSNGSPSALTIETTPDTVRIGDVSAPRCRAQQRELVPNPTPFFDNPRHVQLLQRLLVDWIAGEKAILLVGNQGVGKNKLVDRLLQLLDAEREYIQLHRDTTLHSLTLVPALIDGRITYEDSPLIRAVEQGRVLVVDEADKAPAEVVLVLKGLLEDGYLLLPDGRKVMAGT 210
+H+TL+T F + +V+ +L + + + + DS+ + TI + IGDVS P ELVP P +FD P H ++ +L D +AG+K +LL+GNQGVGKNKL DRLLQLL EREYIQLHRDTT+ +LTLVP L+DG+I +EDSPL+RA + GR L+VDEADKAP EVV VLKGL+EDG +LL +G++++ T
Sbjct: 583 LHDTLLTQFLSSACNRLVDSLLDECKVPVSTLAT----DSQKLQTE---TIHEEGGLLHIGDVSYPIQTPSNPELVPQPH-YFDIPNHTLCMKDMLQDVVAGQKHLLLIGNQGVGKNKLADRLLQLLQQEREYIQLHRDTTVQTLTLVPTLVDGKIEWEDSPLVRAAKTGRTLIVDEADKAPLEVVCVLKGLIEDGEMLLGNGKRLIDST 784
BLAST of EWM21330.1 vs. NCBI_GenBank
Match: gi|570944658|gb|ETP09915.1| (hypothetical protein, variant [Phytophthora parasitica CJ01A1]) HSP 1 Score: 194.897 bits (494), Expect = 9.548e-53 Identity = 104/210 (49.52%), Postives = 141/210 (67.14%), Query Frame = 0
Query: 1 MHETLMTAFATGQVREVVEDVLQRAGLSMPSKGSRRTPDSKSNGSPSALTIETTPDTVRIGDVSAPRCRAQQRELVPNPTPFFDNPRHVQLLQRLLVDWIAGEKAILLVGNQGVGKNKLVDRLLQLLDAEREYIQLHRDTTLHSLTLVPALIDGRITYEDSPLIRAVEQGRVLVVDEADKAPAEVVLVLKGLLEDGYLLLPDGRKVMAGT 210
+H+TL+T F + +V+ +L + + + + DS+ + TI + IGDVS P ELVP P +FD P H ++ +L D +AG+K +LL+GNQGVGKNKL DRLLQLL EREYIQLHRDTT+ +LTLVP L+DG+I +EDSPL+RA + GR L+VDEADKAP EVV VLKGL+EDG +LL +G++++ T
Sbjct: 583 LHDTLLTQFLSSACNRLVDSLLDECKVPVSTLAT----DSQKLQTE---TIHEEGGLLHIGDVSYPIQTPSNPELVPQPH-YFDIPNHTLCMKDMLQDVVAGQKHLLLIGNQGVGKNKLADRLLQLLQQEREYIQLHRDTTVQTLTLVPTLVDGKIEWEDSPLVRAAKTGRTLIVDEADKAPLEVVCVLKGLIEDGEMLLGNGKRLIDST 784
BLAST of EWM21330.1 vs. NCBI_GenBank
Match: gi|567983252|gb|ETL33648.1| (hypothetical protein, variant [Phytophthora parasitica]) HSP 1 Score: 194.897 bits (494), Expect = 9.548e-53 Identity = 104/210 (49.52%), Postives = 141/210 (67.14%), Query Frame = 0
Query: 1 MHETLMTAFATGQVREVVEDVLQRAGLSMPSKGSRRTPDSKSNGSPSALTIETTPDTVRIGDVSAPRCRAQQRELVPNPTPFFDNPRHVQLLQRLLVDWIAGEKAILLVGNQGVGKNKLVDRLLQLLDAEREYIQLHRDTTLHSLTLVPALIDGRITYEDSPLIRAVEQGRVLVVDEADKAPAEVVLVLKGLLEDGYLLLPDGRKVMAGT 210
+H+TL+T F + +V+ +L + + + + DS+ + TI + IGDVS P ELVP P +FD P H ++ +L D +AG+K +LL+GNQGVGKNKL DRLLQLL EREYIQLHRDTT+ +LTLVP L+DG+I +EDSPL+RA + GR L+VDEADKAP EVV VLKGL+EDG +LL +G++++ T
Sbjct: 583 LHDTLLTQFLSSACNRLVDSLLDECKVPVSTLAT----DSQKLQTE---TIHEEGGLLHIGDVSYPIQTPSNPELVPQPH-YFDIPNHTLCMKDMLQDVVAGQKHLLLIGNQGVGKNKLADRLLQLLQQEREYIQLHRDTTVQTLTLVPTLVDGKIEWEDSPLVRAAKTGRTLIVDEADKAPLEVVCVLKGLIEDGEMLLGNGKRLIDST 784 The following BLAST results are available for this feature:
BLAST of EWM21330.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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