EWM21346.1, cds9339 (CDS) Nannochloropsis gaditana

Overview
NameEWM21346.1
Unique Namecds9339
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037253.1:82633..83346 -
Alignment locationKK037253.1:82462..82539 -
Alignment locationKK037253.1:82338..82394 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21346.1
Productquinoid dihydropteridine reductase
Orig transcript idgnl|cribi|Naga_100075g5.2880.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:82633..83346 -
KK037253.1supercontigKK037253.1:82462..82539 -
KK037253.1supercontigKK037253.1:82338..82394 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR016040NAD(P)-bd_dom
IPR002347Glc/ribitol_DH
Homology
BLAST of EWM21346.1 vs. NCBI_GenBank
Match: gi|585101531|gb|EWM21346.1| (quinoid dihydropteridine reductase [Nannochloropsis gaditana])

HSP 1 Score: 570.081 bits (1468), Expect = 0.000e+0
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0
Query:    1 MTAAKQAIIVVGGAGALGKSLINSLRTSPGSSASSIISVDFFPNPRATHSVPLMATIGSITWPETAMQALAKVRACLKDEGGSEMPCRAVLHVAGGWSGGGVHDPGFLESMNRMWICNVQSAALGAHMAGLYLRPQYPSVGRQAGMGDATRDVGDGGTKSGGLMVLTGAGAAVDPKACVSMVGYGLSKSATHFLTRTVAVDPEVVRAGLTALSILPTTIDTPANRMVMPDADFGEWTRPEIIAERLVTWVEDASQRPASGSLIRVVTSQGKTSWMPVLDSSS 282
            MTAAKQAIIVVGGAGALGKSLINSLRTSPGSSASSIISVDFFPNPRATHSVPLMATIGSITWPETAMQALAKVRACLKDEGGSEMPCRAVLHVAGGWSGGGVHDPGFLESMNRMWICNVQSAALGAHMAGLYLRPQYPSVGRQAGMGDATRDVGDGGTKSGGLMVLTGAGAAVDPKACVSMVGYGLSKSATHFLTRTVAVDPEVVRAGLTALSILPTTIDTPANRMVMPDADFGEWTRPEIIAERLVTWVEDASQRPASGSLIRVVTSQGKTSWMPVLDSSS
Sbjct:    1 MTAAKQAIIVVGGAGALGKSLINSLRTSPGSSASSIISVDFFPNPRATHSVPLMATIGSITWPETAMQALAKVRACLKDEGGSEMPCRAVLHVAGGWSGGGVHDPGFLESMNRMWICNVQSAALGAHMAGLYLRPQYPSVGRQAGMGDATRDVGDGGTKSGGLMVLTGAGAAVDPKACVSMVGYGLSKSATHFLTRTVAVDPEVVRAGLTALSILPTTIDTPANRMVMPDADFGEWTRPEIIAERLVTWVEDASQRPASGSLIRVVTSQGKTSWMPVLDSSS 282          
BLAST of EWM21346.1 vs. NCBI_GenBank
Match: gi|909134918|gb|KNE60986.1| (hypothetical protein AMAG_06750 [Allomyces macrogynus ATCC 38327])

HSP 1 Score: 153.295 bits (386), Expect = 5.886e-42
Identity = 107/278 (38.49%), Postives = 144/278 (51.80%), Query Frame = 0
Query:    3 AAKQAIIVVGGAGALGKSLINSLRTSPGSSASSIISVDFFPNPRATHSVPLMATIGSITWPETAMQALAKVRACLKDEGGSEMPCRAVLHVAGGWSGGGVHDPGFLESMNRMWICNVQSAALGAHMAGLYLRPQYPSVGRQAGMGDATRDVGDGGTKSGGLMVLTGAGAAVDPKACVSMVGYGLSKSATHFLTRTVAVDPEV-VRAGLTALSILPTTIDTPANRMVMPDADFGEWTRPEIIAERLVTWVEDASQRPASGSLIRVVTSQGKTSWMPVLD 279
            AAK A+ V GGAGALG++++  LRT P  +   + SVDF  NP A  ++ L        W   A   LA     L           AV+ VAGGW GG   D  F++S+      +VQS+A+ AH+A   L P                          GL+VLTG+ A++ P     M+GYGL+K+A H L R++       +  G TAL ILP T+DTP NR  MPDADF  WT  E +A ++ +W ED S RP SG+L+ VVT  G T++ PV +
Sbjct:    5 AAKHAL-VYGGAGALGRAVVAHLRTLPHWT---VTSVDFAANPDAHRNIALPPL--PPNWTAAAESVLAATPGELD----------AVVCVAGGWVGGHAGDASFVQSVETSVAQSVQSSAVAAHIAAKRLNPN-------------------------GLVVLTGSQASLSPTP--GMIGYGLAKAAVHHLVRSLGAGTSAGLPTGATALGILPVTLDTPMNRKFMPDADFSSWTPLETVAAQVASWAEDPSARPKSGALVEVVTKAGVTAFTPVKE 239          
BLAST of EWM21346.1 vs. NCBI_GenBank
Match: gi|673048411|ref|XP_008878166.1| (hypothetical protein H310_12753 [Aphanomyces invadans] >gi|574466112|gb|ETV93144.1| hypothetical protein H310_12753 [Aphanomyces invadans])

HSP 1 Score: 147.132 bits (370), Expect = 1.218e-39
Identity = 100/269 (37.17%), Postives = 147/269 (54.65%), Query Frame = 0
Query:    8 IIVVGGAGALGKSLINSLRTSPGSSASSIISVDFFPNPRATHSVPLMATIGSITWPETAMQALAKVRACLKDEGGSEMPCRAVLHVAGGWSGGGVHDPGFLESMNRMWICNVQSAALGAHMAGLYLRPQYPSVGRQAGMGDATRDVGDGGTKSGGLMVLTGAGAAVDPKACVSMVGYGLSKSATHFLTRTVAVDPEVVRAGLTALSILPTTIDTPANRMVMPDADFGEWTRPEIIAERLVTWVEDASQRPASGSLIRVVTSQGKTSWMP 276
            ++VVGG+GALG+ +    +    ++  S+I+VDF  N    +   L  T+ +    ++ +Q L KV   LK++        AV+  AGGW+GG V     + ++ +M+  N++SA L AH+A   L P                          GL+VLTG+ AA+   A   MV YG+SK+ATH L   VA     +  G T+L+ILP TIDTP NR  M DADF  WT  + IA++L++W  D S RPASG L++V TS+G+++W P
Sbjct:    5 LLVVGGSGALGRGVAARFK----AAKWSVINVDFVTN---DNDDLLNVTLDA---SKSTLQQLPKVVEGLKNKK-----VDAVVCAAGGWAGGNVASQDAVHNLAQMYTMNMESALLAAHVAATSLNPH-------------------------GLLVLTGSAAAL--TATPEMVTYGMSKAATHHL---VASAVPTLPPGATSLAILPITIDTPTNRKFMADADFSTWTPVDEIAQQLLSWSMDPSTRPASGHLVQVTTSRGQSTWTP 228          
BLAST of EWM21346.1 vs. NCBI_GenBank
Match: gi|1168958572|ref|XP_020452068.1| (dihydropteridine reductase [Monopterus albus])

HSP 1 Score: 145.206 bits (365), Expect = 7.869e-39
Identity = 98/275 (35.64%), Postives = 141/275 (51.27%), Query Frame = 0
Query:    4 AKQAIIVVGGAGALGKSLINSLRTSPGSSASSIISVDFFPNPRATHSVPLMATIGSITWPETAMQALAKVRACLKDEGGSEMPCRAVLHVAGGWSGGGVHDPGFLESMNRMWICNVQSAALGAHMAGLYLRPQYPSVGRQAGMGDATRDVGDGGTKSGGLMVLTGAGAAVDPKACVSMVGYGLSKSATHFLTRTVAVDPEVVRAGLTALSILPTTIDTPANRMVMPDADFGEWTRPEIIAERLVTWVEDASQRPASGSLIRVVTSQGKTSWMPVL 278
            A Q +IV GG GALG   +   +    S+   + S+D   N  A  +V +     S ++ E A Q  A V   L      E    A+L VAGGW+GG        ++ + MW  +V ++ + + +A L+L+P                          GL+ L GA AA+       MVGYG++K+A H L +++A     + AG TA+++LP T+DTP NR  MPDADFG WT  E IAE   TW   A+ RPASGSL++++TS G+T  +P L
Sbjct:    2 ASQRVIVYGGRGALGSKCVQHFK----SNGWWVASIDMAANEEANENVIVKM---SESFTEQAGQVTADVAQLL-----GEQKVDAILCVAGGWAGGNCSSKDLYKNADLMWKQSVWTSTISSRLAALHLKPD-------------------------GLLTLAGAKAALSGTG--GMVGYGMAKAAVHQLCQSLAAKNSGMPAGATAVAVLPVTLDTPMNRKFMPDADFGSWTPLEYIAETFFTWATGAN-RPASGSLMQLLTSGGETRAVPAL 236          
BLAST of EWM21346.1 vs. NCBI_GenBank
Match: gi|698797058|ref|XP_009831558.1| (hypothetical protein H257_07666 [Aphanomyces astaci] >gi|574113349|gb|ETV78839.1| hypothetical protein H257_07666 [Aphanomyces astaci])

HSP 1 Score: 144.05 bits (362), Expect = 2.394e-38
Identity = 98/267 (36.70%), Postives = 144/267 (53.93%), Query Frame = 0
Query:    8 IIVVGGAGALGKSLINSLRTSPGSSASSIISVDFFPNPRATHSVPLMATIGSITWPETAMQALAKVRACLKDEGGSEMPCRAVLHVAGGWSGGGVHDPGFLESMNRMWICNVQSAALGAHMAGLYLRPQYPSVGRQAGMGDATRDVGDGGTKSGGLMVLTGAGAAVDPKACVSMVGYGLSKSATHFLTRTVAVDPEVVRAGLTALSILPTTIDTPANRMVMPDADFGEWTRPEIIAERLVTWVEDASQRPASGSLIRVVTSQGKTSW 274
            ++VVGG+GALG+ +         ++  S+I+VDF  N  A     +  T+ S    ++ +Q L KV   LK++        AV+  AGGW+GG +  P  + ++++M+  N++SA L AH+A   L P+                         GL+VLTG+ AA+   A   MV YG++K+ATH L   VA     +  G T+L+ILP TIDTP NR  M DADF  WT  + IA +L+ W  D S RP SG L++V T+ GK++W
Sbjct:    5 LLVVGGSGALGRGVAARFN----AAKWSVINVDFAANGDAD---VVNVTLDS---GKSTLQQLPKVVEGLKNQ-----KVDAVVCAAGGWAGGNIASPDAVANLSQMYSMNMESALLAAHVAATSLNPK-------------------------GLLVLTGSAAAL--TATPEMVTYGMTKAATHHL---VASAAPTLPTGATSLAILPITIDTPTNRKYMADADFSTWTPVDEIARQLLAWSADPSTRPTSGDLVQVTTADGKSTW 226          
BLAST of EWM21346.1 vs. NCBI_GenBank
Match: gi|831319824|ref|XP_012692716.1| (PREDICTED: dihydropteridine reductase-like [Clupea harengus])

HSP 1 Score: 144.05 bits (362), Expect = 2.862e-38
Identity = 97/273 (35.53%), Postives = 141/273 (51.65%), Query Frame = 0
Query:    4 AKQAIIVVGGAGALGKSLINSLRTSPGSSASSIISVDFFPNPRATHSVPLMATIGSITWPETAMQALAKVRACLKDEGGSEMPCRAVLHVAGGWSGGGVHDPGFLESMNRMWICNVQSAALGAHMAGLYLRPQYPSVGRQAGMGDATRDVGDGGTKSGGLMVLTGAGAAVDPKACVS----MVGYGLSKSATHFLTRTVAVDPEVVRAGLTALSILPTTIDTPANRMVMPDADFGEWTRPEIIAERLVTWVEDASQRPASGSLIRVVTSQGKT 272
            A   +IV GG GALG + +   +    S    + S+D   N  A  +V +     S ++ E A Q  A +   L D     +   A++ VAGGW+GG        ++ + MW  +V ++ + +H+A L+L+P                         GGL+ LTGA      KAC+     MVGYG++K+A H L +++A     + +G TAL+ILP T+DTP NR  MPDADFG WT  E +AE   +W    S RPASGSL+++VT+ GKT
Sbjct:    5 AANRVIVYGGRGALGSACVQYFK----SKGWWVASIDIGANADANANVLVKL---SESFTEQAGQVTADIAQLLGD-----LKVEAIVCVAGGWAGGNCSSTDLYKNTDLMWKQSVWTSTISSHLAALHLKP-------------------------GGLLTLTGA------KACLGGTPGMVGYGMAKAAVHQLCQSLAEPDSGLPSGATALAILPVTLDTPMNRKFMPDADFGSWTPLEYVAEMFFSWAS-GSARPASGSLMQLVTTGGKT 233          
BLAST of EWM21346.1 vs. NCBI_GenBank
Match: gi|1143410333|ref|XP_019959386.1| (PREDICTED: dihydropteridine reductase [Paralichthys olivaceus])

HSP 1 Score: 142.895 bits (359), Expect = 6.912e-38
Identity = 95/269 (35.32%), Postives = 138/269 (51.30%), Query Frame = 0
Query:    4 AKQAIIVVGGAGALGKSLINSLRTSPGSSASSIISVDFFPNPRATHSVPLMATIGSITWPETAMQALAKVRACLKDEGGSEMPCRAVLHVAGGWSGGGVHDPGFLESMNRMWICNVQSAALGAHMAGLYLRPQYPSVGRQAGMGDATRDVGDGGTKSGGLMVLTGAGAAVDPKACVSMVGYGLSKSATHFLTRTVAVDPEVVRAGLTALSILPTTIDTPANRMVMPDADFGEWTRPEIIAERLVTWVEDASQRPASGSLIRVVTSQGKT 272
            A   +IV GG GALG   +   +    S    + S+D   N  A+ +V +     S  + E A Q  A V   L      E    A+L VAGGW+GG        ++ + MW  +V ++ + +H+A L+L+P                         GGL+ L GA AA+       MVGYG++K+A H L +++A +   + +G  A++ILP T+DTP NR  MPDADFG WT  E IAE   +W  D  +RPASGSL++++TS G+T
Sbjct:    2 AAHRVIVYGGRGALGSKCVRLFK----SKGWWVASIDMAANEEASENVIVKM---SECFTEQAGQVTADVAQLL-----GEQKVDAILCVAGGWAGGKCSSKDLYKNSDLMWKQSVWTSTISSHLAALHLKP-------------------------GGLLTLAGAKAALSGTG--GMVGYGMAKAAVHQLCQSLAAENSGMPSGAAAVAILPVTLDTPMNRKFMPDADFGSWTPLEYIAEMFFSWATDV-KRPASGSLMQLLTSGGET 230          
BLAST of EWM21346.1 vs. NCBI_GenBank
Match: gi|1003776397|ref|XP_015718404.1| (PREDICTED: dihydropteridine reductase [Coturnix japonica])

HSP 1 Score: 142.51 bits (358), Expect = 9.233e-38
Identity = 99/274 (36.13%), Postives = 139/274 (50.73%), Query Frame = 0
Query:    3 AAKQAIIVVGGAGALGKSLINSLRTSPGSSASSIISVDFFPNPRATHSVPLMATIGSITWPETAMQALAKVRACLKDEGGSEMPCRAVLHVAGGWSGGGVHDPGFLESMNRMWICNVQSAALGAHMAGLYLRPQYPSVGRQAGMGDATRDVGDGGTKSGGLMVLTGAGAAVDPKACVSMVGYGLSKSATHFLTRTVAVDPEVVRAGLTALSILPTTIDTPANRMVMPDADFGEWTRPEIIAERLVTWVEDASQRPASGSLIRVVTSQGKTSWMP 276
            AA   ++V GG GALG   +   +    S    + S+D   N  A+ SV + AT    ++ E A Q  A+V   L +E        A+L VAGGW+GG        ++ + MW  +V ++ + +H+A  +L                         K GGL+ LTGA AA+       MVGYG++K A H L R++A     + +G  A++ILP T+DTPANR  MPDADF  WT  E IAE    W+     RP SGSLI+V+T+ GKT  +P
Sbjct:    2 AAAGRVLVYGGRGALGSQCVQYFK----SRNWWVASIDLAENEEASASVVVRATE---SFTEQAEQVTAEVGKLLGEE-----KVDAILCVAGGWAGGSAKAKSLYKNCDLMWKQSVWTSTISSHLATKHL-------------------------KEGGLLTLTGAQAALS--GTPGMVGYGMAKGAVHQLCRSLAGANSGLPSGSAAVAILPVTLDTPANRKSMPDADFSSWTSLEFIAETFYDWI-TGKNRPNSGSLIQVITAGGKTELVP 235          
BLAST of EWM21346.1 vs. NCBI_GenBank
Match: gi|160333883|ref|NP_001103939.1| (quinoid dihydropteridine reductase a [Danio rerio] >gi|157278869|gb|AAI15317.1| Qdpra protein [Danio rerio])

HSP 1 Score: 140.969 bits (354), Expect = 3.687e-37
Identity = 94/270 (34.81%), Postives = 141/270 (52.22%), Query Frame = 0
Query:    3 AAKQAIIVVGGAGALGKSLINSLRTSPGSSASSIISVDFFPNPRATHSVPLMATIGSITWPETAMQALAKVRACLKDEGGSEMPCRAVLHVAGGWSGGGVHDPGFLESMNRMWICNVQSAALGAHMAGLYLRPQYPSVGRQAGMGDATRDVGDGGTKSGGLMVLTGAGAAVDPKACVSMVGYGLSKSATHFLTRTVAVDPEVVRAGLTALSILPTTIDTPANRMVMPDADFGEWTRPEIIAERLVTWVEDASQRPASGSLIRVVTSQGKT 272
            AA   ++V GG GALG + ++  +    S    + S+D   N  A  +V +     S ++ + A Q  + V   L      E    A++ VAGGW+GG        ++ + MW  +V ++ + +H+A L+L+P                         GGL+ L GA A++D  A   MVGYG++K+A H L +++A +   + +G  A++ILP T+DTP NR  MPDADFG WT  E IAE   +W    S RPASGSLI++ T+ GKT
Sbjct:    2 AAANRVLVYGGKGALGSACVHYFK----SKGWWVASIDIGANEEANANVLVKL---SESFTDQAAQVTSDVSKLL-----GEHKVEAIVCVAGGWAGGNCSSKDLYKNSDMMWKQSVWTSTISSHLASLHLKP-------------------------GGLLTLAGAKASLD--ATPGMVGYGMAKAAVHQLCKSLAGENSGLPSGAVAVAILPVTLDTPMNRKFMPDADFGSWTPLEYIAETFHSWAT-GSGRPASGSLIQLETTGGKT 231          
BLAST of EWM21346.1 vs. NCBI_GenBank
Match: gi|1101560872|ref|XP_018946443.1| (PREDICTED: dihydropteridine reductase-like [Cyprinus carpio])

HSP 1 Score: 140.584 bits (353), Expect = 4.868e-37
Identity = 93/270 (34.44%), Postives = 142/270 (52.59%), Query Frame = 0
Query:    3 AAKQAIIVVGGAGALGKSLINSLRTSPGSSASSIISVDFFPNPRATHSVPLMATIGSITWPETAMQALAKVRACLKDEGGSEMPCRAVLHVAGGWSGGGVHDPGFLESMNRMWICNVQSAALGAHMAGLYLRPQYPSVGRQAGMGDATRDVGDGGTKSGGLMVLTGAGAAVDPKACVSMVGYGLSKSATHFLTRTVAVDPEVVRAGLTALSILPTTIDTPANRMVMPDADFGEWTRPEIIAERLVTWVEDASQRPASGSLIRVVTSQGKT 272
            AA   ++V GG GALG + ++  +    S    + S+D   N  A  +V +     S ++ + A Q  + V   L      E    A++ VAGGW+GG        ++ + MW  +V ++ + +H+A L+L+P                         GGL+ L+GA A+++      MVGYG++K+A H L +++A +   + +G  A++ILP T+DTP NR  MPDADFG WT  E IAE   +W    S RPASGSLI++VT+ GKT
Sbjct:    2 AAANRVLVYGGKGALGSACVHYFK----SKGWWVASIDIVANEEANANVLVKL---SESFTDQAAQVTSDVATLL-----GEHKVDAIVCVAGGWAGGNCGSKDLYKNSDMMWKQSVWTSTISSHLASLHLKP-------------------------GGLLTLSGAKASLE--GTPGMVGYGMAKAAVHQLCKSLAGENSGLPSGAGAVAILPVTLDTPMNRKFMPDADFGSWTPLEYIAETFYSWAT-GSGRPASGSLIQLVTTGGKT 231          
The following BLAST results are available for this feature:
BLAST of EWM21346.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101531|gb|EWM21346.1|0.000e+0100.00quinoid dihydropteridine reductase [Nannochloropsi... [more]
gi|909134918|gb|KNE60986.1|5.886e-4238.49hypothetical protein AMAG_06750 [Allomyces macrogy... [more]
gi|673048411|ref|XP_008878166.1|1.218e-3937.17hypothetical protein H310_12753 [Aphanomyces invad... [more]
gi|1168958572|ref|XP_020452068.1|7.869e-3935.64dihydropteridine reductase [Monopterus albus][more]
gi|698797058|ref|XP_009831558.1|2.394e-3836.70hypothetical protein H257_07666 [Aphanomyces astac... [more]
gi|831319824|ref|XP_012692716.1|2.862e-3835.53PREDICTED: dihydropteridine reductase-like [Clupea... [more]
gi|1143410333|ref|XP_019959386.1|6.912e-3835.32PREDICTED: dihydropteridine reductase [Paralichthy... [more]
gi|1003776397|ref|XP_015718404.1|9.233e-3836.13PREDICTED: dihydropteridine reductase [Coturnix ja... [more]
gi|160333883|ref|NP_001103939.1|3.687e-3734.81quinoid dihydropteridine reductase a [Danio rerio]... [more]
gi|1101560872|ref|XP_018946443.1|4.868e-3734.44PREDICTED: dihydropteridine reductase-like [Cyprin... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9369rna9369Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications