EWM29735.1, cds932 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM29735.1 vs. NCBI_GenBank
Match: gi|585112315|gb|EWM29735.1| (hypothetical protein Naga_100022g46 [Nannochloropsis gaditana]) HSP 1 Score: 282.337 bits (721), Expect = 2.306e-96 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0
Query: 1 MFAARRIVAHSSALRPAFTHATGRAQAPTRVVRRTLAGHGSAPPATGWEGEVRKVLKEDWQVVCGIMGFYTTLYLVSKLFSGGKKAAPDTVAASSSATSASSEVISMADDKFSEYVGNSENMLKWEQSLNDPKAYE 136
MFAARRIVAHSSALRPAFTHATGRAQAPTRVVRRTLAGHGSAPPATGWEGEVRKVLKEDWQVVCGIMGFYTTLYLVSKLFSGGKKAAPDTVAASSSATSASSEVISMADDKFSEYVGNSENMLKWEQSLNDPKAYE
Sbjct: 1 MFAARRIVAHSSALRPAFTHATGRAQAPTRVVRRTLAGHGSAPPATGWEGEVRKVLKEDWQVVCGIMGFYTTLYLVSKLFSGGKKAAPDTVAASSSATSASSEVISMADDKFSEYVGNSENMLKWEQSLNDPKAYE 136
BLAST of EWM29735.1 vs. NCBI_GenBank
Match: gi|1173942778|gb|OQR91724.1| (hypothetical protein ACHHYP_04440 [Achlya hypogyna]) HSP 1 Score: 78.1814 bits (191), Expect = 6.328e-16 Identity = 51/120 (42.50%), Postives = 64/120 (53.33%), Query Frame = 0
Query: 18 FTHATGRAQAPTRVVR----RTLAGHG-SAPPATGWEGEVRKVLKEDWQVVCGIMGFYTTLYLVSKLFSGGKKAAP--DTVAASSSATSASSEVISMADDKFSEYVGNSENMLKWEQSLN 130
T GR TR ++ R +AGH S PP TG E +R L ED+Q+V +G YT L F GKK AP + VAA SSATS +I DD F E+ + N+ KWE+SLN
Sbjct: 12 ITKMLGRLTQVTRAMKPAGSRGMAGHAHSGPPPTGIEAVIRSKLPEDYQIVMATLGIYTVLS-APLWFPSGKKEAPKVEAVAAPSSATSVIPSII---DDSFEEWAKVAGNLAKWEESLN 127
BLAST of EWM29735.1 vs. NCBI_GenBank
Match: gi|813118882|ref|XP_012196091.1| (hypothetical protein SPRG_02150 [Saprolegnia parasitica CBS 223.65] >gi|641539534|gb|KDO33343.1| hypothetical protein SPRG_02150 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 76.2554 bits (186), Expect = 2.555e-15 Identity = 47/113 (41.59%), Postives = 63/113 (55.75%), Query Frame = 0
Query: 23 GRAQAPTRVVR----RTLAGHG-SAPPATGWEGEVRKVLKEDWQVVCGIMGFYTTLYLVSKLFSGGKKAAPDTVAASSSATSASSEVISMADDKFSEYVGNSENMLKWEQSLN 130
GR TR ++ R +AGH S PP TG E +R L ED+Q+V +G YT L F GKK AP V A ++ TS +S + S+ DD F E+ + N+ KWE+SLN
Sbjct: 3 GRLTQVTRAMKPAGSRGMAGHAHSGPPPTGIEAVIRSKLPEDYQIVMATLGIYTVLT-APLWFPSGKKEAPK-VEAVAAPTSTTSVIPSIIDDSFEEWAKVAGNIAKWEESLN 113
BLAST of EWM29735.1 vs. NCBI_GenBank
Match: gi|669159164|ref|XP_008615144.1| (hypothetical protein SDRG_10906 [Saprolegnia diclina VS20] >gi|530733061|gb|EQC31303.1| hypothetical protein SDRG_10906 [Saprolegnia diclina VS20]) HSP 1 Score: 74.7146 bits (182), Expect = 1.588e-14 Identity = 47/118 (39.83%), Postives = 63/118 (53.39%), Query Frame = 0
Query: 18 FTHATGRAQAPTRVVR----RTLAGHG-SAPPATGWEGEVRKVLKEDWQVVCGIMGFYTTLYLVSKLFSGGKKAAPDTVAASSSATSASSEVISMADDKFSEYVGNSENMLKWEQSLN 130
T GR TR ++ R +AGH S PP TG E +R L ED+Q+V +G YT L F KK AP A ++ A S +S + S+AD+ F E+ + NM KWE+SLN
Sbjct: 12 ITKMLGRLTQVTRAMKPAGSRGMAGHAHSGPPPTGIEAVIRSKLPEDYQIVMATLGIYTVLT-APLWFPSSKKEAPKVEAVTAPA-STNSVIPSIADETFEEWAKVAGNMAKWEESLN 127
BLAST of EWM29735.1 vs. NCBI_GenBank
Match: gi|953489852|emb|CEG47218.1| (conserved hypothetical protein [Plasmopara halstedii]) HSP 1 Score: 69.707 bits (169), Expect = 7.951e-13 Identity = 44/108 (40.74%), Postives = 61/108 (56.48%), Query Frame = 0
Query: 27 APTRVVRRT-----LAGHGSAPPATGWEGEVRKVLKEDWQVVCGIMGFYTTLYLVSKLFSGGKKAAPDTVAASSSATSASSEVISMADDKFSEYVGNSENMLKWEQSL 129
APT V RRT L GHG AP E +VR L +D+ +V +G YTTL ++ KL KK + ++ S+TSAS + S+ DD+F E+ N+ KWE+SL
Sbjct: 9 APTHV-RRTPAQCRLMGHGPAPVEGSLEAKVRHYLPKDYHIVLATLGAYTTLIMLFKLKPSKKKEEEIVIPSNLSSTSAS--IPSLFDDEFDEWSKLPGNLDKWEKSL 113
BLAST of EWM29735.1 vs. NCBI_GenBank
Match: gi|325194592|emb|CCA28321.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 70.4774 bits (171), Expect = 8.152e-13 Identity = 38/93 (40.86%), Postives = 56/93 (60.22%), Query Frame = 0
Query: 38 GHGSAPPATGWEGEVRKVLKEDWQVVCGIMGFYTTLYLVSKLFSGGKKAAPDTVAASSSATSASSEVISMADDKFSEYVGNSENMLKWEQSLN 130
GHG +PP TG+E +VR L ED Q+V +GFY T++ + KL KK P A S+ T EV S+ D++F ++ S N+ +WE+SL+
Sbjct: 60 GHGGSPP-TGFEAKVRAYLPEDHQIVLATLGFYATVFALCKLKPSKKKEEPIHAIADSTTT----EVPSLFDEEFDKWSQISGNLERWEKSLD 147
BLAST of EWM29735.1 vs. NCBI_GenBank
Match: gi|673018022|ref|XP_008862972.1| (hypothetical protein H310_01599 [Aphanomyces invadans] >gi|574482175|gb|ETW09167.1| hypothetical protein H310_01599 [Aphanomyces invadans]) HSP 1 Score: 68.1662 bits (165), Expect = 3.698e-12 Identity = 45/117 (38.46%), Postives = 59/117 (50.43%), Query Frame = 0
Query: 23 GRAQAPTRVVR--------RTLAGHGSAPPATGWEGEVRKVLKEDWQVVCGIMGFYTTLYLVSKLFSGGKKAAPDTVAASSSA-TSASSEVISMADDKFSEYVGNSENMLKWEQSLN 130
GR TR V+ R +A HG P TG E +R L D +V +GFYT L F GKKA + AAS +A +AS+E+ S+ DD F E+ N KWE+SL+
Sbjct: 3 GRLSQVTRAVKPAAAAGQTRGMASHGPPPTYTGLEATIRAKLPNDHDIVLATLGFYTVL-TAPLWFPTGKKAKVEEPAASPAADVNASTEIPSLFDDNFDEWSKVPGNFAKWEKSLD 118
BLAST of EWM29735.1 vs. NCBI_GenBank
Match: gi|1173961836|gb|OQS07748.1| (hypothetical protein THRCLA_20072 [Thraustotheca clavata]) HSP 1 Score: 65.0846 bits (157), Expect = 5.517e-11 Identity = 41/113 (36.28%), Postives = 60/113 (53.10%), Query Frame = 0
Query: 23 GRAQAPTRVVR----RTLAGHG-SAPPATGWEGEVRKVLKEDWQVVCGIMGFYTTLYLVSKLFSGGKKAAPDTVAASSSATSASSEVISMADDKFSEYVGNSENMLKWEQSLN 130
GR R+++ R +AGH S PP TG E +R L ED+Q+V +G YT L + KK P+ + + +S SS + S+ DD F E+ + N+ KWE+SLN
Sbjct: 3 GRLSNAARMMKPAGSRGMAGHAHSGPPPTGIEAVIRSKLPEDYQIVMATLGIYTVLS-APLWWPSSKK--PEAKVEAVAPSSGSSVIPSIIDDSFEEWAKVAGNLAKWEESLN 112
BLAST of EWM29735.1 vs. NCBI_GenBank
Match: gi|698775924|ref|XP_009821006.1| (hypothetical protein H257_00156 [Aphanomyces astaci] >gi|574123131|gb|ETV88606.1| hypothetical protein H257_00156 [Aphanomyces astaci]) HSP 1 Score: 62.003 bits (149), Expect = 9.154e-10 Identity = 42/115 (36.52%), Postives = 56/115 (48.70%), Query Frame = 0
Query: 23 GRAQAPTRVVR-------RTLAGHGSAPPATGWEGEVRKVLKEDWQVVCGIMGFYTTLYLVSKLFSGGKKAAPDTVAASSSATSASSEVISMADDKFSEYVGNSENMLKWEQSLN 130
GR TR V+ R +A HG P TG E +R L D +V +G Y L F GKKA V ++A++AS+EV S+ DD F E+ N KWE+SL+
Sbjct: 3 GRLTQVTRAVKPAAAGQTRGMASHGPPPTYTGLEATIRAKLPNDHDIVLATLGAYAVL-TAPFWFPTGKKA---VVEEPAAASNASTEVPSLFDDNFDEWSKIPGNFAKWEKSLD 113
BLAST of EWM29735.1 vs. NCBI_GenBank
Match: gi|299469850|emb|CBN76704.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 60.8474 bits (146), Expect = 2.767e-9 Identity = 41/103 (39.81%), Postives = 62/103 (60.19%), Query Frame = 0
Query: 33 RRTLAGHGSAPPATGWEGEVRKVLKEDWQVVCGIMGFYTTLYLVSK----LFSGGKKAAPDTVAASSSATSA-SSEVISMADDKFSEYVGNSENMLKWEQSLN 130
+R +AG G+AP TGWE ++R+ L +D VV I GFY LY+V K LFS KK + VAA A+SA SS++ +D F +++ + NM K+ +++
Sbjct: 21 KRGMAG-GAAPKYTGWEAQIREKLPKDEHVVVAISGFYVGLYVVCKGISALFSSPKK---EEVAAPVVASSATSSDIPDGYEDNFWQWLEGAGNMEKYLATID 119 The following BLAST results are available for this feature:
BLAST of EWM29735.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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