EWM21363.1, cds9310 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM21363.1 vs. NCBI_GenBank
Match: gi|585101553|gb|EWM21363.1| (hypothetical protein Naga_101560g2 [Nannochloropsis gaditana]) HSP 1 Score: 595.504 bits (1534), Expect = 0.000e+0 Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0 Query: 1 MTQLNHHNTQTAKRIMGTQPMDPGHPKKVLCSGGLPPPFSACKWTLEELLVKQREPISSSASSCTSRALLLTLEFADKRSMTHMLGRISAFSEGKANKGLKSEAKAGDASRGYYGHNFPLTVLEDFSQIQGASGGKNGARKGGEEGGLARGEQDLVDLCQKLGLMKKTKGDGPRGSKGHGALGGKGGQASSSYLIAHLKHDLGTRQHELCHARYFLDPTYRQACLTAWEALSEKHRDYLSAFLSRLGYHEAVHADEFQAFALTEKANFWGVRIDVAWPDVIGGGEGRK 288 MTQLNHHNTQTAKRIMGTQPMDPGHPKKVLCSGGLPPPFSACKWTLEELLVKQREPISSSASSCTSRALLLTLEFADKRSMTHMLGRISAFSEGKANKGLKSEAKAGDASRGYYGHNFPLTVLEDFSQIQGASGGKNGARKGGEEGGLARGEQDLVDLCQKLGLMKKTKGDGPRGSKGHGALGGKGGQASSSYLIAHLKHDLGTRQHELCHARYFLDPTYRQACLTAWEALSEKHRDYLSAFLSRLGYHEAVHADEFQAFALTEKANFWGVRIDVAWPDVIGGGEGRK Sbjct: 1 MTQLNHHNTQTAKRIMGTQPMDPGHPKKVLCSGGLPPPFSACKWTLEELLVKQREPISSSASSCTSRALLLTLEFADKRSMTHMLGRISAFSEGKANKGLKSEAKAGDASRGYYGHNFPLTVLEDFSQIQGASGGKNGARKGGEEGGLARGEQDLVDLCQKLGLMKKTKGDGPRGSKGHGALGGKGGQASSSYLIAHLKHDLGTRQHELCHARYFLDPTYRQACLTAWEALSEKHRDYLSAFLSRLGYHEAVHADEFQAFALTEKANFWGVRIDVAWPDVIGGGEGRK 288
BLAST of EWM21363.1 vs. NCBI_GenBank
Match: gi|302852783|ref|XP_002957910.1| (hypothetical protein VOLCADRAFT_107854 [Volvox carteri f. nagariensis] >gi|300256787|gb|EFJ41046.1| hypothetical protein VOLCADRAFT_107854 [Volvox carteri f. nagariensis]) HSP 1 Score: 92.8189 bits (229), Expect = 5.499e-19 Identity = 39/82 (47.56%), Postives = 58/82 (70.73%), Query Frame = 0 Query: 193 YLIAHLKHDLGTRQHELCHARYFLDPTYRQACLTAW-EALSEKHRDYLSAFLSRLGYHEAVHADEFQAFALTEKANFWGVRI 273 Y+IA L+ D + +HE+CHARY+LDP+YR + W +L+ RD ++AFL+RL Y H DEFQA+ +TEK+NF+G+ + Sbjct: 122 YVIATLEGDAHSIRHEMCHARYYLDPSYRDTVMQVWSRSLASAQRDAITAFLNRLKYDTVAHVDEFQAYLVTEKSNFFGMDL 203
BLAST of EWM21363.1 vs. NCBI_GenBank
Match: gi|159479612|ref|XP_001697884.1| (hypothetical protein CHLREDRAFT_151553 [Chlamydomonas reinhardtii] >gi|158273982|gb|EDO99767.1| predicted protein [Chlamydomonas reinhardtii]) HSP 1 Score: 87.8113 bits (216), Expect = 3.811e-17 Identity = 41/87 (47.13%), Postives = 58/87 (66.67%), Query Frame = 0 Query: 186 GGQASSSYLIAHLKHDLGTRQHELCHARYFLDPTYRQACLTAWE-ALSEKHRDYLSAFLSRLGYHEAVHADEFQAFALTEKANFWGV 271 G + Y+IA L D + +HE+CHARY+LDP YR WE AL+ + R+ + AFL+RL Y VH DE+QA+ +TEK+NF+G+ Sbjct: 111 GLPKTVRYVIATLDGDAHSIRHEMCHARYYLDPPYRTTVAQVWEGALTPQQRESVCAFLTRLKYDPCVHEDEWQAYLVTEKSNFFGM 197
BLAST of EWM21363.1 vs. NCBI_GenBank
Match: gi|1004144470|gb|KXZ52450.1| (hypothetical protein GPECTOR_9g494 [Gonium pectorale]) HSP 1 Score: 85.5001 bits (210), Expect = 1.658e-16 Identity = 45/101 (44.55%), Postives = 59/101 (58.42%), Query Frame = 0 Query: 175 GSKGHGALGGKGGQASSS-YLIAHLKHDLGTRQHELCHARYFLDPTYRQACLTAW-EALSEKHRDYLSAFLSRLGYHEAVHADEFQAFALTEKANFWGVRI 273 G+K H G + YLIA L D + +HE+CHARY L P YR W E L+ RD ++AFL+RL Y VH DEFQA+ +TEK NF+G+ + Sbjct: 80 GNKLHSDFRRAAGLPKQARYLIATLDGDAHSIRHEMCHARYHLQPEYRDTVQRVWTECLAAAQRDAITAFLNRLKYDAVVHLDEFQAYLVTEKPNFFGMDL 180
BLAST of EWM21363.1 vs. NCBI_GenBank
Match: gi|1174571071|gb|ARF09911.1| (hypothetical protein Indivirus_5_34 [Indivirus ILV1]) HSP 1 Score: 82.8037 bits (203), Expect = 7.361e-16 Identity = 45/134 (33.58%), Postives = 72/134 (53.73%), Query Frame = 0 Query: 148 LARGEQDLVDLCQKLG-LMKKTKGDGPRGSKGHGALG-----GKGGQASSSYLIAHLKHDLGTRQHELCHARYFLDPTYRQACLTAWEALSEKHRDYLSAFLSRLGYHEAVHADEFQAFALTE----KANFWGV 271 L QD ++ +K+G + ++ + + KGH G G + Y+IA++++D T+QHEL HA+Y+ D YR W +LS K R+ ++A L+ +GY E H DEFQA+ +E NFW + Sbjct: 17 LVFNNQDTMN--KKIGKISERRESNKKVIYKGHNFPGCFLDFDVGVYEENFYVIAYIENDQHTKQHELYHAKYYFDTKYRNKVNKLWNSLSCKKRNEITAILNNMGYREEFHLDEFQAYLYSEPLRKNKNFWNI 148
BLAST of EWM21363.1 vs. NCBI_GenBank
Match: gi|909127983|gb|KNE55141.1| (hypothetical protein AMAG_01065 [Allomyces macrogynus ATCC 38327]) HSP 1 Score: 76.6406 bits (187), Expect = 1.740e-12 Identity = 69/203 (33.99%), Postives = 89/203 (43.84%), Query Frame = 0 Query: 65 TSRALLLTLEFADKRSMTHMLGRISAFSEGKANKGL---KSEAKAGDASRG----YYGHNFPLTVLEDFSQIQGASGGKNGARKGGEEGGLARGEQDLVDLCQKLGLMKKTKGDGPRGSKGHGALGGKGGQASSSYLIAHLKHDLGTRQHELCHARYFLDP-TYRQACLTAWEALSEKHRDYLSAFLSRLGYHEAVHADEFQA 259 + R L+L + DK ++ +L R S F E + L ++ A RG YYGHNFPL L F +GG G G E LAR L KL + + GP + SYL+ + D T QHEL HA Y + YR AC A +L + R + A+L GY EAV ADEFQA Sbjct: 66 SDRRLVLVVA-KDKATLDALLLRASIFYENPDLQNLYLDPTQFATAQAERGKPFAYYGHNFPLASLAKFLMAASNAGGARGLTAG--ETHLAR------TLTTKLKALSSSGRSGPTVPT-----------LADSYLVGWVNGDTPTLQHELHHAWYHFNAGEYRAACDAALASLDQVVRLQVRAYLRGCGYCEAVWADEFQA 248
BLAST of EWM21363.1 vs. NCBI_GenBank
Match: gi|909133467|gb|KNE59785.1| (hypothetical protein AMAG_05247 [Allomyces macrogynus ATCC 38327]) HSP 1 Score: 76.2554 bits (186), Expect = 2.285e-12 Identity = 70/204 (34.31%), Postives = 91/204 (44.61%), Query Frame = 0 Query: 65 TSRALLLTLEFADKRSMTHMLGRISAFSEGK--ANKGLK-SEAKAGDASRG----YYGHNFPLTVLEDFSQIQGASGGKNGARKGGEEGGLARGEQDLV-DLCQKLGLMKKTKGDGPRGSKGHGALGGKGGQASSSYLIAHLKHDLGTRQHELCHARYFLDP-TYRQACLTAWEALSEKHRDYLSAFLSRLGYHEAVHADEFQA 259 + R L+L + DK ++ +L R S F E N+ L ++ A A RG YYGHNFPL L F +GG G L GE LV L K+ + + GP + SYL+ + D T QHEL HA Y + YR AC A +L + R + A+L GY EAV ADEFQA Sbjct: 65 SDRRLVLVVA-KDKATLDALLLRASIFYENPDLQNQYLDATQFAAAQAERGKPFTYYGHNFPLASLAKFLMAASNAGGARG---------LTAGETYLVRTLTTKIKALSTSGRSGPTVPT-----------LADSYLVGWVNGDTPTFQHELHHAWYHFNAGEYRMACDAALASLDQVVRLQVRAYLRGCGYCEAVWADEFQA 247
BLAST of EWM21363.1 vs. NCBI_GenBank
Match: gi|551554583|ref|XP_005764524.1| (hypothetical protein EMIHUDRAFT_213863 [Emiliania huxleyi CCMP1516] >gi|485614239|gb|EOD12095.1| hypothetical protein EMIHUDRAFT_213863 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 70.4774 bits (171), Expect = 2.475e-10 Identity = 61/206 (29.61%), Postives = 84/206 (40.78%), Query Frame = 0 Query: 70 LLTLEFADKRSMTHMLGRISAFSEGKANKG-LKSEAKAGD-ASRGYYGHNFPLTVLEDFSQIQGASGGKNGARKGGEEGGLARGEQDLVDLCQKLGLMKKTKGDGPRGSKGHGALGGKGGQASSSYLIAHLKHDLGTRQHELCHARYFLDPTYRQACLTAWEALSEKHRDYLSAFLSRLGYHEAVHADEFQAFALTEKANFWGVRI 273 L +E+ D +M LGR+S E A++G L S A+ S Y GHN L F + A+ A E LA G + + +++++ T HELCHARY L P YR A AW +H L +++ LGYH + HADEF A+ LTE FW R+ Sbjct: 114 LALVEWRDAVAMNRALGRLSTLLEHPAHRGRLVSHAQQRRLPSASYLGHNLYADTLRSFESLAAAAREAEAAASPAELAFLA----------------------------------GWAERGAPQVVVSYVSGATPTLAHELCHARYALLPPYRGAVDAAWA----RHEQLLCKWMADLGYHASRHADEFGAYLLTEPHAFWRGRV 281
BLAST of EWM21363.1 vs. NCBI_GenBank
Match: gi|1023182046|ref|XP_016292708.1| (hypothetical protein PSEUBRA_SCAF2g02821 [Kalmanozyma brasiliensis GHG001] >gi|557998256|gb|EST07719.1| hypothetical protein PSEUBRA_SCAF2g02821 [Kalmanozyma brasiliensis GHG001]) HSP 1 Score: 69.3218 bits (168), Expect = 1.546e-9 Identity = 60/195 (30.77%), Postives = 87/195 (44.62%), Query Frame = 0 Query: 70 LLTLEFADKRSMTHMLGRISAFSEGKA-NKGLKSEAKAGD--ASRGYYGHNFPLTVLEDFSQIQGASGGKNGARKGGEEGGLARGEQDLVDLCQKLGLMKKTKGDGPRGSKGHGALGGKGGQASSSYLIAHLKHDL-GTRQHELCHARYFLDPTYRQACLTAWEALSEKHRDYLSAFLSRLGYHEAVHADEFQAF 260 +LTL F L R+ AF E + +K S +A D R Y G N PL+ + ++ + S + + E + E DL+DL + +G R G+GG+ S YLI+ + T HEL HA YFL PTYR T +++LS ++R + L Y V DEFQA+ Sbjct: 435 ILTLLFPTAALQHSALARMEAFYESSSTSKAYLSLQQAADERICRNYQGFNLPLSAVREWLEAMHESTSSSDLPRWWAEH-CSGEENDLLDLLVTHNAIAVNEGAVSRS--------GEGGEVS--YLISCVASQAHSTLPHELLHALYFLSPTYRSEVDTQYDSLSPQNRKVIETDLGLRKYAPEVWRDEFQAY 618
BLAST of EWM21363.1 vs. NCBI_GenBank
Match: gi|758975341|ref|XP_011387725.1| (hypothetical protein UMAG_01763 [Ustilago maydis 521] >gi|757948133|gb|KIS70598.1| hypothetical protein UMAG_01763 [Ustilago maydis 521]) HSP 1 Score: 66.2402 bits (160), Expect = 1.547e-8 Identity = 57/182 (31.32%), Postives = 79/182 (43.41%), Query Frame = 0 Query: 85 LGRISAFSEGKAN-KGLKSEAKAGDAS--RGYYGHNFPLT--VLEDFSQIQGASGGKNGARKGGEEGGLARGEQDLVDLCQKLGLMKKTKGDGPRGSKGHGALGGKGGQASSSYLIAHL-KHDLGTRQHELCHARYFLDPTYRQACLTAWEALSEKHRDYLSAFLSRLGYHEAVHADEFQAF 260 L R+ AF E +N K S +A D R Y G NFPL V E + A+ + K A E +L+D+ LG + +G R G S SY+I+ + T HEL HA YFL P YR + W++LS ++ + L Y +V DEFQA+ Sbjct: 489 LARVEAFYESDSNAKRYLSLQEAADERICRNYQGFNFPLRQGVHEWLDAMFEATNSNADSAKWWTPHCSAE-ENELLDVLISLGAISPYEGASSRND---------GESGSVSYVISCIASQAYSTLPHELLHALYFLSPPYRAFVKSQWDSLSAANKKVIETDLGLRKYSSSVFQDEFQAY 660 The following BLAST results are available for this feature:
BLAST of EWM21363.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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