EWM21363.1, cds9310 (CDS) Nannochloropsis gaditana

Overview
NameEWM21363.1
Unique Namecds9310
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037253.1:2571..3437 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21363.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101560g2.9851.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:2571..3437 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM21363.1 vs. NCBI_GenBank
Match: gi|585101553|gb|EWM21363.1| (hypothetical protein Naga_101560g2 [Nannochloropsis gaditana])

HSP 1 Score: 595.504 bits (1534), Expect = 0.000e+0
Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0
Query:    1 MTQLNHHNTQTAKRIMGTQPMDPGHPKKVLCSGGLPPPFSACKWTLEELLVKQREPISSSASSCTSRALLLTLEFADKRSMTHMLGRISAFSEGKANKGLKSEAKAGDASRGYYGHNFPLTVLEDFSQIQGASGGKNGARKGGEEGGLARGEQDLVDLCQKLGLMKKTKGDGPRGSKGHGALGGKGGQASSSYLIAHLKHDLGTRQHELCHARYFLDPTYRQACLTAWEALSEKHRDYLSAFLSRLGYHEAVHADEFQAFALTEKANFWGVRIDVAWPDVIGGGEGRK 288
            MTQLNHHNTQTAKRIMGTQPMDPGHPKKVLCSGGLPPPFSACKWTLEELLVKQREPISSSASSCTSRALLLTLEFADKRSMTHMLGRISAFSEGKANKGLKSEAKAGDASRGYYGHNFPLTVLEDFSQIQGASGGKNGARKGGEEGGLARGEQDLVDLCQKLGLMKKTKGDGPRGSKGHGALGGKGGQASSSYLIAHLKHDLGTRQHELCHARYFLDPTYRQACLTAWEALSEKHRDYLSAFLSRLGYHEAVHADEFQAFALTEKANFWGVRIDVAWPDVIGGGEGRK
Sbjct:    1 MTQLNHHNTQTAKRIMGTQPMDPGHPKKVLCSGGLPPPFSACKWTLEELLVKQREPISSSASSCTSRALLLTLEFADKRSMTHMLGRISAFSEGKANKGLKSEAKAGDASRGYYGHNFPLTVLEDFSQIQGASGGKNGARKGGEEGGLARGEQDLVDLCQKLGLMKKTKGDGPRGSKGHGALGGKGGQASSSYLIAHLKHDLGTRQHELCHARYFLDPTYRQACLTAWEALSEKHRDYLSAFLSRLGYHEAVHADEFQAFALTEKANFWGVRIDVAWPDVIGGGEGRK 288          
BLAST of EWM21363.1 vs. NCBI_GenBank
Match: gi|302852783|ref|XP_002957910.1| (hypothetical protein VOLCADRAFT_107854 [Volvox carteri f. nagariensis] >gi|300256787|gb|EFJ41046.1| hypothetical protein VOLCADRAFT_107854 [Volvox carteri f. nagariensis])

HSP 1 Score: 92.8189 bits (229), Expect = 5.499e-19
Identity = 39/82 (47.56%), Postives = 58/82 (70.73%), Query Frame = 0
Query:  193 YLIAHLKHDLGTRQHELCHARYFLDPTYRQACLTAW-EALSEKHRDYLSAFLSRLGYHEAVHADEFQAFALTEKANFWGVRI 273
            Y+IA L+ D  + +HE+CHARY+LDP+YR   +  W  +L+   RD ++AFL+RL Y    H DEFQA+ +TEK+NF+G+ +
Sbjct:  122 YVIATLEGDAHSIRHEMCHARYYLDPSYRDTVMQVWSRSLASAQRDAITAFLNRLKYDTVAHVDEFQAYLVTEKSNFFGMDL 203          
BLAST of EWM21363.1 vs. NCBI_GenBank
Match: gi|159479612|ref|XP_001697884.1| (hypothetical protein CHLREDRAFT_151553 [Chlamydomonas reinhardtii] >gi|158273982|gb|EDO99767.1| predicted protein [Chlamydomonas reinhardtii])

HSP 1 Score: 87.8113 bits (216), Expect = 3.811e-17
Identity = 41/87 (47.13%), Postives = 58/87 (66.67%), Query Frame = 0
Query:  186 GGQASSSYLIAHLKHDLGTRQHELCHARYFLDPTYRQACLTAWE-ALSEKHRDYLSAFLSRLGYHEAVHADEFQAFALTEKANFWGV 271
            G   +  Y+IA L  D  + +HE+CHARY+LDP YR      WE AL+ + R+ + AFL+RL Y   VH DE+QA+ +TEK+NF+G+
Sbjct:  111 GLPKTVRYVIATLDGDAHSIRHEMCHARYYLDPPYRTTVAQVWEGALTPQQRESVCAFLTRLKYDPCVHEDEWQAYLVTEKSNFFGM 197          
BLAST of EWM21363.1 vs. NCBI_GenBank
Match: gi|1004144470|gb|KXZ52450.1| (hypothetical protein GPECTOR_9g494 [Gonium pectorale])

HSP 1 Score: 85.5001 bits (210), Expect = 1.658e-16
Identity = 45/101 (44.55%), Postives = 59/101 (58.42%), Query Frame = 0
Query:  175 GSKGHGALGGKGGQASSS-YLIAHLKHDLGTRQHELCHARYFLDPTYRQACLTAW-EALSEKHRDYLSAFLSRLGYHEAVHADEFQAFALTEKANFWGVRI 273
            G+K H       G    + YLIA L  D  + +HE+CHARY L P YR      W E L+   RD ++AFL+RL Y   VH DEFQA+ +TEK NF+G+ +
Sbjct:   80 GNKLHSDFRRAAGLPKQARYLIATLDGDAHSIRHEMCHARYHLQPEYRDTVQRVWTECLAAAQRDAITAFLNRLKYDAVVHLDEFQAYLVTEKPNFFGMDL 180          
BLAST of EWM21363.1 vs. NCBI_GenBank
Match: gi|1174571071|gb|ARF09911.1| (hypothetical protein Indivirus_5_34 [Indivirus ILV1])

HSP 1 Score: 82.8037 bits (203), Expect = 7.361e-16
Identity = 45/134 (33.58%), Postives = 72/134 (53.73%), Query Frame = 0
Query:  148 LARGEQDLVDLCQKLG-LMKKTKGDGPRGSKGHGALG-----GKGGQASSSYLIAHLKHDLGTRQHELCHARYFLDPTYRQACLTAWEALSEKHRDYLSAFLSRLGYHEAVHADEFQAFALTE----KANFWGV 271
            L    QD ++  +K+G + ++ + +     KGH   G       G    + Y+IA++++D  T+QHEL HA+Y+ D  YR      W +LS K R+ ++A L+ +GY E  H DEFQA+  +E      NFW +
Sbjct:   17 LVFNNQDTMN--KKIGKISERRESNKKVIYKGHNFPGCFLDFDVGVYEENFYVIAYIENDQHTKQHELYHAKYYFDTKYRNKVNKLWNSLSCKKRNEITAILNNMGYREEFHLDEFQAYLYSEPLRKNKNFWNI 148          
BLAST of EWM21363.1 vs. NCBI_GenBank
Match: gi|909127983|gb|KNE55141.1| (hypothetical protein AMAG_01065 [Allomyces macrogynus ATCC 38327])

HSP 1 Score: 76.6406 bits (187), Expect = 1.740e-12
Identity = 69/203 (33.99%), Postives = 89/203 (43.84%), Query Frame = 0
Query:   65 TSRALLLTLEFADKRSMTHMLGRISAFSEGKANKGL---KSEAKAGDASRG----YYGHNFPLTVLEDFSQIQGASGGKNGARKGGEEGGLARGEQDLVDLCQKLGLMKKTKGDGPRGSKGHGALGGKGGQASSSYLIAHLKHDLGTRQHELCHARYFLDP-TYRQACLTAWEALSEKHRDYLSAFLSRLGYHEAVHADEFQA 259
            + R L+L +   DK ++  +L R S F E    + L    ++     A RG    YYGHNFPL  L  F      +GG  G   G  E  LAR       L  KL  +  +   GP                + SYL+  +  D  T QHEL HA Y  +   YR AC  A  +L +  R  + A+L   GY EAV ADEFQA
Sbjct:   66 SDRRLVLVVA-KDKATLDALLLRASIFYENPDLQNLYLDPTQFATAQAERGKPFAYYGHNFPLASLAKFLMAASNAGGARGLTAG--ETHLAR------TLTTKLKALSSSGRSGPTVPT-----------LADSYLVGWVNGDTPTLQHELHHAWYHFNAGEYRAACDAALASLDQVVRLQVRAYLRGCGYCEAVWADEFQA 248          
BLAST of EWM21363.1 vs. NCBI_GenBank
Match: gi|909133467|gb|KNE59785.1| (hypothetical protein AMAG_05247 [Allomyces macrogynus ATCC 38327])

HSP 1 Score: 76.2554 bits (186), Expect = 2.285e-12
Identity = 70/204 (34.31%), Postives = 91/204 (44.61%), Query Frame = 0
Query:   65 TSRALLLTLEFADKRSMTHMLGRISAFSEGK--ANKGLK-SEAKAGDASRG----YYGHNFPLTVLEDFSQIQGASGGKNGARKGGEEGGLARGEQDLV-DLCQKLGLMKKTKGDGPRGSKGHGALGGKGGQASSSYLIAHLKHDLGTRQHELCHARYFLDP-TYRQACLTAWEALSEKHRDYLSAFLSRLGYHEAVHADEFQA 259
            + R L+L +   DK ++  +L R S F E     N+ L  ++  A  A RG    YYGHNFPL  L  F      +GG  G         L  GE  LV  L  K+  +  +   GP                + SYL+  +  D  T QHEL HA Y  +   YR AC  A  +L +  R  + A+L   GY EAV ADEFQA
Sbjct:   65 SDRRLVLVVA-KDKATLDALLLRASIFYENPDLQNQYLDATQFAAAQAERGKPFTYYGHNFPLASLAKFLMAASNAGGARG---------LTAGETYLVRTLTTKIKALSTSGRSGPTVPT-----------LADSYLVGWVNGDTPTFQHELHHAWYHFNAGEYRMACDAALASLDQVVRLQVRAYLRGCGYCEAVWADEFQA 247          
BLAST of EWM21363.1 vs. NCBI_GenBank
Match: gi|551554583|ref|XP_005764524.1| (hypothetical protein EMIHUDRAFT_213863 [Emiliania huxleyi CCMP1516] >gi|485614239|gb|EOD12095.1| hypothetical protein EMIHUDRAFT_213863 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 70.4774 bits (171), Expect = 2.475e-10
Identity = 61/206 (29.61%), Postives = 84/206 (40.78%), Query Frame = 0
Query:   70 LLTLEFADKRSMTHMLGRISAFSEGKANKG-LKSEAKAGD-ASRGYYGHNFPLTVLEDFSQIQGASGGKNGARKGGEEGGLARGEQDLVDLCQKLGLMKKTKGDGPRGSKGHGALGGKGGQASSSYLIAHLKHDLGTRQHELCHARYFLDPTYRQACLTAWEALSEKHRDYLSAFLSRLGYHEAVHADEFQAFALTEKANFWGVRI 273
            L  +E+ D  +M   LGR+S   E  A++G L S A+     S  Y GHN     L  F  +  A+     A    E   LA                                  G   + +   +++++     T  HELCHARY L P YR A   AW     +H   L  +++ LGYH + HADEF A+ LTE   FW  R+
Sbjct:  114 LALVEWRDAVAMNRALGRLSTLLEHPAHRGRLVSHAQQRRLPSASYLGHNLYADTLRSFESLAAAAREAEAAASPAELAFLA----------------------------------GWAERGAPQVVVSYVSGATPTLAHELCHARYALLPPYRGAVDAAWA----RHEQLLCKWMADLGYHASRHADEFGAYLLTEPHAFWRGRV 281          
BLAST of EWM21363.1 vs. NCBI_GenBank
Match: gi|1023182046|ref|XP_016292708.1| (hypothetical protein PSEUBRA_SCAF2g02821 [Kalmanozyma brasiliensis GHG001] >gi|557998256|gb|EST07719.1| hypothetical protein PSEUBRA_SCAF2g02821 [Kalmanozyma brasiliensis GHG001])

HSP 1 Score: 69.3218 bits (168), Expect = 1.546e-9
Identity = 60/195 (30.77%), Postives = 87/195 (44.62%), Query Frame = 0
Query:   70 LLTLEFADKRSMTHMLGRISAFSEGKA-NKGLKSEAKAGD--ASRGYYGHNFPLTVLEDFSQIQGASGGKNGARKGGEEGGLARGEQDLVDLCQKLGLMKKTKGDGPRGSKGHGALGGKGGQASSSYLIAHLKHDL-GTRQHELCHARYFLDPTYRQACLTAWEALSEKHRDYLSAFLSRLGYHEAVHADEFQAF 260
            +LTL F         L R+ AF E  + +K   S  +A D    R Y G N PL+ + ++ +    S   +   +   E   +  E DL+DL      +   +G   R         G+GG+ S  YLI+ +      T  HEL HA YFL PTYR    T +++LS ++R  +   L    Y   V  DEFQA+
Sbjct:  435 ILTLLFPTAALQHSALARMEAFYESSSTSKAYLSLQQAADERICRNYQGFNLPLSAVREWLEAMHESTSSSDLPRWWAEH-CSGEENDLLDLLVTHNAIAVNEGAVSRS--------GEGGEVS--YLISCVASQAHSTLPHELLHALYFLSPTYRSEVDTQYDSLSPQNRKVIETDLGLRKYAPEVWRDEFQAY 618          
BLAST of EWM21363.1 vs. NCBI_GenBank
Match: gi|758975341|ref|XP_011387725.1| (hypothetical protein UMAG_01763 [Ustilago maydis 521] >gi|757948133|gb|KIS70598.1| hypothetical protein UMAG_01763 [Ustilago maydis 521])

HSP 1 Score: 66.2402 bits (160), Expect = 1.547e-8
Identity = 57/182 (31.32%), Postives = 79/182 (43.41%), Query Frame = 0
Query:   85 LGRISAFSEGKAN-KGLKSEAKAGDAS--RGYYGHNFPLT--VLEDFSQIQGASGGKNGARKGGEEGGLARGEQDLVDLCQKLGLMKKTKGDGPRGSKGHGALGGKGGQASSSYLIAHL-KHDLGTRQHELCHARYFLDPTYRQACLTAWEALSEKHRDYLSAFLSRLGYHEAVHADEFQAF 260
            L R+ AF E  +N K   S  +A D    R Y G NFPL   V E    +  A+     + K       A  E +L+D+   LG +   +G   R           G   S SY+I+ +      T  HEL HA YFL P YR    + W++LS  ++  +   L    Y  +V  DEFQA+
Sbjct:  489 LARVEAFYESDSNAKRYLSLQEAADERICRNYQGFNFPLRQGVHEWLDAMFEATNSNADSAKWWTPHCSAE-ENELLDVLISLGAISPYEGASSRND---------GESGSVSYVISCIASQAYSTLPHELLHALYFLSPPYRAFVKSQWDSLSAANKKVIETDLGLRKYSSSVFQDEFQAY 660          
The following BLAST results are available for this feature:
BLAST of EWM21363.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101553|gb|EWM21363.1|0.000e+0100.00hypothetical protein Naga_101560g2 [Nannochloropsi... [more]
gi|302852783|ref|XP_002957910.1|5.499e-1947.56hypothetical protein VOLCADRAFT_107854 [Volvox car... [more]
gi|159479612|ref|XP_001697884.1|3.811e-1747.13hypothetical protein CHLREDRAFT_151553 [Chlamydomo... [more]
gi|1004144470|gb|KXZ52450.1|1.658e-1644.55hypothetical protein GPECTOR_9g494 [Gonium pectora... [more]
gi|1174571071|gb|ARF09911.1|7.361e-1633.58hypothetical protein Indivirus_5_34 [Indivirus ILV... [more]
gi|909127983|gb|KNE55141.1|1.740e-1233.99hypothetical protein AMAG_01065 [Allomyces macrogy... [more]
gi|909133467|gb|KNE59785.1|2.285e-1234.31hypothetical protein AMAG_05247 [Allomyces macrogy... [more]
gi|551554583|ref|XP_005764524.1|2.475e-1029.61hypothetical protein EMIHUDRAFT_213863 [Emiliania ... [more]
gi|1023182046|ref|XP_016292708.1|1.546e-930.77hypothetical protein PSEUBRA_SCAF2g02821 [Kalmanoz... [more]
gi|758975341|ref|XP_011387725.1|1.547e-831.32hypothetical protein UMAG_01763 [Ustilago maydis 5... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9340rna9340Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications