EWM21375.1, cds9298 (CDS) Nannochloropsis gaditana

Overview
NameEWM21375.1
Unique Namecds9298
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037252.1:398979..399513 -

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Properties
Property NameValue
Start range398979
Start range.
Protein idEWM21375.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101543g1.4984.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:398979..399513 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM21375.1 vs. NCBI_GenBank
Match: gi|585101583|gb|EWM21375.1| (hypothetical protein Naga_101543g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 343.584 bits (880), Expect = 3.003e-119
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0 
Query:    1 MRSGSNSRNEEEHHREGGRGHDGNEGATASQFSSSVPNNRGSALTQGLAALEQGRLSRAGIATPTPPPTSSLRPCLPLQPPASSPPVPSMTTPLAALHPEEEEGELPRTTAMSTVAFSSLPSSVPPFNLLPSHPIPPSSFLIGSPDPVVEQFPASLSRARPVTALHLPSEASDRPSHQ 178
            MRSGSNSRNEEEHHREGGRGHDGNEGATASQFSSSVPNNRGSALTQGLAALEQGRLSRAGIATPTPPPTSSLRPCLPLQPPASSPPVPSMTTPLAALHPEEEEGELPRTTAMSTVAFSSLPSSVPPFNLLPSHPIPPSSFLIGSPDPVVEQFPASLSRARPVTALHLPSEASDRPSHQ
Sbjct:    1 MRSGSNSRNEEEHHREGGRGHDGNEGATASQFSSSVPNNRGSALTQGLAALEQGRLSRAGIATPTPPPTSSLRPCLPLQPPASSPPVPSMTTPLAALHPEEEEGELPRTTAMSTVAFSSLPSSVPPFNLLPSHPIPPSSFLIGSPDPVVEQFPASLSRARPVTALHLPSEASDRPSHQ 178
The following BLAST results are available for this feature:
BLAST of EWM21375.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101583|gb|EWM21375.1|3.003e-119100.00hypothetical protein Naga_101543g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9328rna9328Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications