EWM21381.1, cds9293 (CDS) Nannochloropsis gaditana

Overview
NameEWM21381.1
Unique Namecds9293
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037252.1:386113..386136 +
Alignment locationKK037252.1:386912..387660 +
Alignment locationKK037252.1:387886..388116 +
Alignment locationKK037252.1:388355..388682 +
Alignment locationKK037252.1:389078..389484 +
Alignment locationKK037252.1:389707..389971 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21381.1
Productabc transporter b family protein
Orig transcript idgnl|cribi|Naga_100424g4.4523.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037252.1supercontigKK037252.1:386113..386136 +
KK037252.1supercontigKK037252.1:386912..387660 +
KK037252.1supercontigKK037252.1:387886..388116 +
KK037252.1supercontigKK037252.1:388355..388682 +
KK037252.1supercontigKK037252.1:389078..389484 +
KK037252.1supercontigKK037252.1:389707..389971 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005215transporter activity
GO:0000166nucleotide binding
GO:0042626ATPase activity, coupled to transmembrane movement of substances
GO:0016887ATPase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR017871ABC_transporter_CS
IPR011527ABC1_TM_dom
IPR003439ABC_transporter-like
IPR027417P-loop_NTPase
IPR003593AAA+_ATPase
Homology
BLAST of EWM21381.1 vs. NCBI_GenBank
Match: gi|585101595|gb|EWM21381.1| (abc transporter b family protein [Nannochloropsis gaditana])

HSP 1 Score: 1361.67 bits (3523), Expect = 0.000e+0
Identity = 667/667 (100.00%), Postives = 667/667 (100.00%), Query Frame = 0
Query:    1 MDSAQRSTKGEKSSQNERARNLRILKTLGRHLWPSTSLHPDAASLKARVVLSMGLLVSSKLITIQVPFLFKDIVDKLNVPPDAFLTGAVALPLSLLVGYGVARTTATAFQELRNAVFATVAQKAIRKVSRDAFVHLHDLELDFHLNRSTGAVSRVIDRGGRSINFVLSALLFNIVPTALEMGLVAYILSVQCGWKHAGVALGTVGAYTVFTILITQWRTQFRKDMVRIENEASGKAVDSLLNYETVKYFGNEEHEADRYDQSLRDFQEAGLKTQTSLSLLNAGQNAIFSLGLSSIMVLTALDIQAGLASVGDLVLVNGLLFQLSIPLFFIGSIYREVRQALVDMEAMFDLKDLQPKVTSPPHALPLVLPPALPPSLPPSLPPGPEGIVFEDVSFAYGPHQILRECSFKVPYGQTVAVVGPSGCGKSTLLRLLYRFYDVDGGSIQINHQDIRDVPLPSLRRALGVVPQDTLLFNDTIYYNIHYGNLLASRAAVETAARKAQIHESILRMPQGYETRVGERGLKLSGGERQRVAIARAILKDAPMLLCDEATSALDAATEGEIMHHVKVLGQGKTTLMIAHRLSTIQDADKIVVLDQGRVVEEGSHQELLARGEGGRYAELWEMQQKHHAVRGGGEEEEAEEEEEEEARRLKRKAAYDVRLRGNDGRKI 667
            MDSAQRSTKGEKSSQNERARNLRILKTLGRHLWPSTSLHPDAASLKARVVLSMGLLVSSKLITIQVPFLFKDIVDKLNVPPDAFLTGAVALPLSLLVGYGVARTTATAFQELRNAVFATVAQKAIRKVSRDAFVHLHDLELDFHLNRSTGAVSRVIDRGGRSINFVLSALLFNIVPTALEMGLVAYILSVQCGWKHAGVALGTVGAYTVFTILITQWRTQFRKDMVRIENEASGKAVDSLLNYETVKYFGNEEHEADRYDQSLRDFQEAGLKTQTSLSLLNAGQNAIFSLGLSSIMVLTALDIQAGLASVGDLVLVNGLLFQLSIPLFFIGSIYREVRQALVDMEAMFDLKDLQPKVTSPPHALPLVLPPALPPSLPPSLPPGPEGIVFEDVSFAYGPHQILRECSFKVPYGQTVAVVGPSGCGKSTLLRLLYRFYDVDGGSIQINHQDIRDVPLPSLRRALGVVPQDTLLFNDTIYYNIHYGNLLASRAAVETAARKAQIHESILRMPQGYETRVGERGLKLSGGERQRVAIARAILKDAPMLLCDEATSALDAATEGEIMHHVKVLGQGKTTLMIAHRLSTIQDADKIVVLDQGRVVEEGSHQELLARGEGGRYAELWEMQQKHHAVRGGGEEEEAEEEEEEEARRLKRKAAYDVRLRGNDGRKI
Sbjct:    1 MDSAQRSTKGEKSSQNERARNLRILKTLGRHLWPSTSLHPDAASLKARVVLSMGLLVSSKLITIQVPFLFKDIVDKLNVPPDAFLTGAVALPLSLLVGYGVARTTATAFQELRNAVFATVAQKAIRKVSRDAFVHLHDLELDFHLNRSTGAVSRVIDRGGRSINFVLSALLFNIVPTALEMGLVAYILSVQCGWKHAGVALGTVGAYTVFTILITQWRTQFRKDMVRIENEASGKAVDSLLNYETVKYFGNEEHEADRYDQSLRDFQEAGLKTQTSLSLLNAGQNAIFSLGLSSIMVLTALDIQAGLASVGDLVLVNGLLFQLSIPLFFIGSIYREVRQALVDMEAMFDLKDLQPKVTSPPHALPLVLPPALPPSLPPSLPPGPEGIVFEDVSFAYGPHQILRECSFKVPYGQTVAVVGPSGCGKSTLLRLLYRFYDVDGGSIQINHQDIRDVPLPSLRRALGVVPQDTLLFNDTIYYNIHYGNLLASRAAVETAARKAQIHESILRMPQGYETRVGERGLKLSGGERQRVAIARAILKDAPMLLCDEATSALDAATEGEIMHHVKVLGQGKTTLMIAHRLSTIQDADKIVVLDQGRVVEEGSHQELLARGEGGRYAELWEMQQKHHAVRGGGEEEEAEEEEEEEARRLKRKAAYDVRLRGNDGRKI 667          
BLAST of EWM21381.1 vs. NCBI_GenBank
Match: gi|669159696|ref|XP_008615410.1| (ATP-binding cassette, subfamily B (MDR/TAP), member 7 [Saprolegnia diclina VS20] >gi|530732995|gb|EQC31237.1| ATP-binding cassette, subfamily B (MDR/TAP), member 7 [Saprolegnia diclina VS20])

HSP 1 Score: 732.25 bits (1889), Expect = 0.000e+0
Identity = 367/618 (59.39%), Postives = 470/618 (76.05%), Query Frame = 0
Query:   12 KSSQNERARNLRILKTLGRHLWPSTSLHPDAASLKARVVLSMGLLVSSKLITIQVPFLFKDIVDKL-NVPPDAFLTGAVALPLSLLVGYGVARTTATAFQELRNAVFATVAQKAIRKVSRDAFVHLHDLELDFHLNRSTGAVSRVIDRGGRSINFVLSALLFNIVPTALEMGLVAYILSVQCGWKHAGVALGTVGAYTVFTILITQWRTQFRKDMVRIENEASGKAVDSLLNYETVKYFGNEEHEADRYDQSLRDFQEAGLKTQTSLSLLNAGQNAIFSLGLSSIMVLTALDIQAGLASVGDLVLVNGLLFQLSIPLFFIGSIYREVRQALVDMEAMFDLKDLQPKVTSPPHALPLVLPPALPPSLPPSLPPGPEGIVFEDVSFAYGPHQ-ILRECSFKVPYGQTVAVVGPSGCGKSTLLRLLYRFYDVDGGSIQINHQDIRDVPLPSLRRALGVVPQDTLLFNDTIYYNIHYGNLLASRAAVETAARKAQIHESILRMPQGYETRVGERGLKLSGGERQRVAIARAILKDAPMLLCDEATSALDAATEGEIMHHVKVLGQGKTTLMIAHRLSTIQDADKIVVLDQGRVVEEGSHQELLARGEGGRYAELWEMQQKHH 627
            KS + +   +  I+ +L  +LWP  +   +A ++K RV LS+GLLVS+KLI IQVPFLFK++VD +    P+     A ALP+SL++GYG+ R +A AFQELRNA+FA VAQ  IR+V+R+ F HLH L+L FHL+R TGA+SR IDRG RSI+FVL ++LFN+ PTALE+GLV+ I++ Q GW++A V LGT+ AYT FT+ +TQWRT+ R+ M ++ENEA GK +DSL+NYETVKYF NE+HEADRYD  LR++Q+A LKTQTSLS LNAGQNAIFS GL+ IM + A  I  G  +VGDLVLVNGLLFQLSIPL FIGS+YREVRQA++DMEAMF L+ +QPK+              LP +        P+ I+FE+V FAY   + IL   SF V  G+T A+VG SG GKST+LRLLYRFYDV  G+I+I+  DIR++ +  LRRA+ VVPQDT+LFN++IYYNIHYGNL A++  V  AA+ AQIH++I R P+GYET+VGERGLKLSGGE+QRVAIARA+LKDAP+LL DEATSALD+ TE EI+   K +G  KTT++IAHRLSTIQD+D+I+V+D GRVVE G+H ELLA+   G+Y+E+W  QQ+ H
Sbjct:   39 KSKEQKPVTSKEIVTSLAGYLWPEGN-GAEARAVKGRVALSLGLLVSAKLINIQVPFLFKELVDVMGTTTPEV----AAALPVSLVLGYGLGRFSANAFQELRNAIFAKVAQGTIRQVARNVFEHLHGLDLKFHLDRQTGALSRTIDRGSRSIDFVLRSMLFNVAPTALEIGLVSSIMAYQFGWEYAAVTLGTLTAYTGFTVGVTQWRTEIRRRMNKLENEAGGKVIDSLMNYETVKYFNNEKHEADRYDVVLRNYQDASLKTQTSLSFLNAGQNAIFSAGLTGIMYMAAQGIVDGTLTVGDLVLVNGLLFQLSIPLNFIGSVYREVRQAVIDMEAMFALRAVQPKI--------------LPGASTFENLTTPKEIIFENVHFAYREDRPILNGTSFGVTAGKTTAIVGSSGSGKSTILRLLYRFYDVQSGTIRIDGHDIREMDMDGLRRAIAVVPQDTVLFNESIYYNIHYGNLKATKEQVIQAAKVAQIHDAIERFPEGYETKVGERGLKLSGGEKQRVAIARAMLKDAPILLFDEATSALDSETEFEIVREFKAIGLNKTTVIIAHRLSTIQDSDEILVMDAGRVVERGTHVELLAK--EGKYSEMWHRQQQGH 635          
BLAST of EWM21381.1 vs. NCBI_GenBank
Match: gi|1173936225|gb|OQR87212.1| (ATP-binding Cassette (ABC) Superfamily [Achlya hypogyna])

HSP 1 Score: 721.85 bits (1862), Expect = 0.000e+0
Identity = 362/609 (59.44%), Postives = 462/609 (75.86%), Query Frame = 0
Query:   24 ILKTLGRHLWPSTSLHPDAASLKARVVLSMGLLVSSKLITIQVPFLFKDIVDKL--NVPPDAFLTGAVALPLSLLVGYGVARTTATAFQELRNAVFATVAQKAIRKVSRDAFVHLHDLELDFHLNRSTGAVSRVIDRGGRSINFVLSALLFNIVPTALEMGLVAYILSVQCGWKHAGVALGTVGAYTVFTILITQWRTQFRKDMVRIENEASGKAVDSLLNYETVKYFGNEEHEADRYDQSLRDFQEAGLKTQTSLSLLNAGQNAIFSLGLSSIMVLTALDIQAGLASVGDLVLVNGLLFQLSIPLFFIGSIYREVRQALVDMEAMFDLKDLQPKVTSPPHALPLVLPPALPPSLPPSLPPGPEGIVFEDVSFAYGPHQ-ILRECSFKVPYGQTVAVVGPSGCGKSTLLRLLYRFYDVDGGSIQINHQDIRDVPLPSLRRALGVVPQDTLLFNDTIYYNIHYGNLLASRAAVETAARKAQIHESILRMPQGYETRVGERGLKLSGGERQRVAIARAILKDAPMLLCDEATSALDAATEGEIMHHVKVLGQGKTTLMIAHRLSTIQDADKIVVLDQGRVVEEGSHQELLARGEGGRYAELWEMQQKHHAV 629
            I+ +L  +LWPS +   +A ++K RV LS+GLLVSSKLI IQVPF+FKD+VD +     P+     A  LP+ L+VGYG+ R +A AFQELRNA+FA VAQ  IR+V+R+ F HLH L+L FHL+R TGA+SR IDRG RSI+FVL ++LFN+ PTALE+ LV+ I++ Q GW++A V LGT+ AYT FT+ +TQWRT+ R+ M ++ENEA GK +DSL+NYETVKYF NE+HEADRYD  LR++Q+A LKTQTSLS LNAGQNAIFS GL++IM + A  I  G  +VGDLVLVNGLLFQLSIPL FIGS+YREVRQA++DMEAMF L+ +QPK+              LP +   +    P+ I FEDV+F+Y   + IL   +F V  G+T A+VG SG GKST+LRLLYRFYDV GG I I+  D+RD+ + +LR+A+ VVPQDT+LFN++I+YNI YGNL A+   V  AA+ AQIH+SI R P+GY T+VGERGLKLSGGE+QRVAIARA+LKDAP+LL DEATSALD+ TE EI+   K +G  KT ++IAHRLSTIQD+D+I+V+D GRV+E G+H ELLA    G+YAE+W  QQ+ H+V
Sbjct:   57 IVASLAGYLWPSGN-DAEARAVKGRVALSLGLLVSSKLINIQVPFIFKDLVDVMGATATPEV----AAVLPVGLVVGYGLGRFSANAFQELRNAIFAKVAQGTIRQVARNVFEHLHGLDLKFHLDRQTGALSRTIDRGSRSIDFVLRSILFNVAPTALEIALVSSIMAHQFGWEYAAVTLGTLTAYTGFTVGVTQWRTEIRRRMNKLENEAGGKVIDSLMNYETVKYFNNEKHEADRYDTVLRNYQDASLKTQTSLSFLNAGQNAIFSAGLTAIMYMAAQGIVDGTLTVGDLVLVNGLLFQLSIPLNFIGSVYREVRQAVIDMEAMFALRAVQPKI--------------LPGAAAFADAKAPKTIRFEDVAFSYREDRPILNGTTFSVAPGKTTAIVGTSGSGKSTILRLLYRFYDVQGGKITIDDHDVRDLNMDTLRKAIAVVPQDTVLFNESIFYNIKYGNLAATDEQVYQAAKVAQIHDSIERFPEGYATKVGERGLKLSGGEKQRVAIARAMLKDAPILLFDEATSALDSETEFEIVREFKAIGLNKTMVIIAHRLSTIQDSDEILVMDAGRVIERGTHVELLA--AEGKYAEMWVRQQQGHSV 644          
BLAST of EWM21381.1 vs. NCBI_GenBank
Match: gi|673023964|ref|XP_008865943.1| (hypothetical protein H310_03747 [Aphanomyces invadans] >gi|574479171|gb|ETW06166.1| hypothetical protein H310_03747 [Aphanomyces invadans])

HSP 1 Score: 705.671 bits (1820), Expect = 0.000e+0
Identity = 359/602 (59.63%), Postives = 455/602 (75.58%), Query Frame = 0
Query:   24 ILKTLGRHLWPSTSLHPDAASLKARVVLSMGLLVSSKLITIQVPFLFKDIVDKLNVPPDAFLTGAVALPLSLLVGYGVARTTATAFQELRNAVFATVAQKAIRKVSRDAFVHLHDLELDFHLNRSTGAVSRVIDRGGRSINFVLSALLFNIVPTALEMGLVAYILSVQCGWKHAGVALGTVGAYTVFTILITQWRTQFRKDMVRIENEASGKAVDSLLNYETVKYFGNEEHEADRYDQSLRDFQEAGLKTQTSLSLLNAGQNAIFSLGLSSIMVLTALDIQAGLASVGDLVLVNGLLFQLSIPLFFIGSIYREVRQALVDMEAMFDLKDLQPKVTSPPHALPLVLPPALPPSLPPSLPPGPEGIVFEDVSFAYGPHQ-ILRECSFKVPYGQTVAVVGPSGCGKSTLLRLLYRFYDVDGGSIQINHQDIRDVPLPSLRRALGVVPQDTLLFNDTIYYNIHYGNLLASRAAVETAARKAQIHESILRMPQGYETRVGERGLKLSGGERQRVAIARAILKDAPMLLCDEATSALDAATEGEIMHHVKVLGQGKTTLMIAHRLSTIQDADKIVVLDQGRVVEEGSHQELLARGEGGRYAELWEMQQ 624
            IL TL  +LWP  +   +A ++K+RVV+S+GLLV+ KLI I+VPFLFK++VD +  P  +     VA+P+SL++GYG+AR +A AFQELR AVFA VAQ  IR+V R  F HLH L+L FHLNR TGA++R IDRG RSI+FVL +LLF++VPTALE+GLV+ I++   GW++A + +GT+ AYT FTI++TQWRT  R+ M ++EN+ASG  +DSL+NYETVKYF NE HEA +YD +++ +Q+A LKTQTSLS LNAGQNAIFS GL+ +M L    I  G  +VGDLVLVNGLLFQLSIPL FIGS+YREVRQ++VDMEAMF L+           A+P  +PP    +   S+   P+ I F++VSF Y P Q IL   SF VP G+T+AVVG SG GKST+LRLLYRFYD D G + ++  DIRDVP+  LR  + VVPQDT+LFND+I YNI YGNL A+R  V  AA+ AQIH+SI +   GY+TRVGERGLKLSGGE+QRVAIARA+LKDAP+LL DEATSALD+ TE EI+   K +G  KTT++IAHRLSTIQDAD+IVVLD+G V+E G+H +L+ R  GG+YAE+W  QQ
Sbjct:   71 ILTTLAAYLWPEGT-SKEALAVKSRVVVSVGLLVAGKLINIEVPFLFKELVDVMG-PSTSSEAALVAVPVSLVLGYGLARFSANAFQELRAAVFAKVAQGTIRQVGRRVFEHLHTLDLRFHLNRQTGALARTIDRGSRSIDFVLRSLLFSVVPTALEIGLVSGIMAHNFGWEYAAITVGTLTAYTGFTIVVTQWRTDIRRRMNKLENQASGHVIDSLMNYETVKYFNNEAHEASKYDATIKQYQDASLKTQTSLSFLNAGQNAIFSAGLTGVMYLATQGIADGALTVGDLVLVNGLLFQLSIPLNFIGSVYREVRQSVVDMEAMFALQ-----------AVPSSIPPPSFTTSATSVERTPKTITFDNVSFGYRPGQPILNGMSFTVPAGRTIAVVGSSGSGKSTILRLLYRFYDADDGRVLVDGVDIRDVPIDDLRHLIAVVPQDTVLFNDSIAYNIGYGNLNATRDDVVHAAKVAQIHDSIEQFHDGYDTRVGERGLKLSGGEKQRVAIARAMLKDAPILLFDEATSALDSETEHEIVKQFKAIGLHKTTVIIAHRLSTIQDADEIVVLDKGHVIERGTHLDLVDR-PGGKYAEMWYRQQ 658          
BLAST of EWM21381.1 vs. NCBI_GenBank
Match: gi|698825253|ref|XP_009845655.1| (hypothetical protein H257_18317 [Aphanomyces astaci] >gi|574099262|gb|ETV64889.1| hypothetical protein H257_18317 [Aphanomyces astaci])

HSP 1 Score: 705.671 bits (1820), Expect = 0.000e+0
Identity = 363/630 (57.62%), Postives = 465/630 (73.81%), Query Frame = 0
Query:    9 KGEKSSQNERARNLRILKTLGRHLWPSTSLHPDAASLKARVVLSMGLLVSSKLITIQVPFLFKDIVDKLNVPPDAFLTGAVALPLSLLVGYGVARTTATAFQELRNAVFATVAQKAIRKVSRDAFVHLHDLELDFHLNRSTGAVSRVIDRGGRSINFVLSALLFNIVPTALEMGLVAYILSVQCGWKHAGVALGTVGAYTVFTILITQWRTQFRKDMVRIENEASGKAVDSLLNYETVKYFGNEEHEADRYDQSLRDFQEAGLKTQTSLSLLNAGQNAIFSLGLSSIMVLTALDIQAGLASVGDLVLVNGLLFQLSIPLFFIGSIYREVRQALVDMEAMFDLKDLQPKVTSPPHALPLVLPPALPPSLPPSLPPGPEGIVFEDVSFAYGPHQ-ILRECSFKVPYGQTVAVVGPSGCGKSTLLRLLYRFYDVDGGSIQINHQDIRDVPLPSLRRALGVVPQDTLLFNDTIYYNIHYGNLLASRAAVETAARKAQIHESILRMPQGYETRVGERGLKLSGGERQRVAIARAILKDAPMLLCDEATSALDAATEGEIMHHVKVLGQGKTTLMIAHRLSTIQDADKIVVLDQGRVVEEGSHQELLARGEGGRYAELWEMQQKHHAVRGGGEEEE 637
            K  K ++     +  IL +L  +LWP  +   +A ++K+RV +S+GLLV+ KLI IQVPFLFK++VD +     +     VA+P+SL++GYG+AR +A AFQELR AVFA VAQ  IR+V R  F HLH L+L FHLNR TGA++R IDRG RSI+FVL +LLF++VPTALE+GLV+ I++ Q GW++A + +GT+ AYT FTI++TQWRT  R+ M ++ENEASG  +DSL+NYETVKYF NE HEA +YD +++ +Q+A L TQTSLS LNAGQNAIFS GL+++M L    I  G  +VGDLVLVNGLLFQLSIPL FIGS+YR+VRQ++VDMEAMF L+ +   +  P  A                     + I FE+VSF Y P Q IL   SF VP G+TVAVVG SG GKST+LRLLYRFYD DGG + ++  D++D+P+  LRR + VVPQDT+LFND+I YNI YGNL ASR  +  AA+ AQIH+SI++   GY+T+VGERGLKLSGGE+QRVAIARA+LKDAP+LL DEATSALD+ TE EI+   K +G  KTT++IAHRLSTIQDAD+IVVLD+GRVVE G+H EL+ R +GG+YAE+W  QQ   A R G +E+E
Sbjct:  361 KTTKHNEPPSTSSKEILTSLASYLWPHGT-SKEALAVKSRVAVSVGLLVAGKLINIQVPFLFKELVDLMGTSATSPEAALVAVPVSLVLGYGLARFSANAFQELRAAVFAKVAQGTIRQVGRRVFEHLHTLDLRFHLNRQTGALARTIDRGSRSIDFVLRSLLFSVVPTALEIGLVSGIMAHQFGWEYAAITMGTLTAYTGFTIVVTQWRTDIRRRMNKLENEASGHVIDSLMNYETVKYFNNEAHEATKYDATIQQYQDASLTTQTSLSFLNAGQNAIFSAGLTAVMYLATQGIVDGHLTVGDLVLVNGLLFQLSIPLNFIGSVYRDVRQSVVDMEAMFALQAVPSSIPPPSFATSSSSSSLTRSP---------KSITFENVSFGYRPDQPILNGTSFTVPAGRTVAVVGSSGSGKSTILRLLYRFYDADGGRVLVDGADVKDLPIDDLRRLIAVVPQDTVLFNDSIAYNIGYGNLSASRDDIVHAAKVAQIHDSIVQFRDGYDTKVGERGLKLSGGEKQRVAIARAMLKDAPVLLFDEATSALDSETEHEIVKQFKAIGLHKTTVIIAHRLSTIQDADEIVVLDKGRVVERGTHVELVDR-QGGKYAEMWHRQQHSKASRHGDKEKE 979          
BLAST of EWM21381.1 vs. NCBI_GenBank
Match: gi|301103670|ref|XP_002900921.1| (ATP-binding Cassette (ABC) Superfamily [Phytophthora infestans T30-4] >gi|262101676|gb|EEY59728.1| ATP-binding Cassette (ABC) Superfamily [Phytophthora infestans T30-4])

HSP 1 Score: 702.205 bits (1811), Expect = 0.000e+0
Identity = 354/623 (56.82%), Postives = 458/623 (73.52%), Query Frame = 0
Query:   24 ILKTLGRHLWPSTSLHPDAASLKARVVLSMGLLVSSKLITIQVPFLFKDIVDKLNVPPDAFLTGA--VALPLSLLVGYGVARTTATAFQELRNAVFATVAQKAIRKVSRDAFVHLHDLELDFHLNRSTGAVSRVIDRGGRSINFVLSALLFNIVPTALEMGLVAYILSVQCGWKHAGVALGTVGAYTVFTILITQWRTQFRKDMVRIENEASGKAVDSLLNYETVKYFGNEEHEADRYDQSLRDFQEAGLKTQTSLSLLNAGQNAIFSLGLSSIMVLTALDIQAGLASVGDLVLVNGLLFQLSIPLFFIGSIYREVRQALVDMEAMFDLKDLQPKVTSPPHALPLVLPPALPPSLPPSLPPGPEGIVFEDVSFAYGPH-QILRECSFKVPYGQTVAVVGPSGCGKSTLLRLLYRFYDVDGGSIQINHQDIRDVPLPSLRRALGVVPQDTLLFNDTIYYNIHYGNLLASRAAVETAARKAQIHESILRMPQGYETRVGERGLKLSGGERQRVAIARAILKDAPMLLCDEATSALDAATEGEIMHHVKVLGQGKTTLMIAHRLSTIQDADKIVVLDQGRVVEEGSHQELLARGEGGRYAELWEMQQKHHAVRGGGEEEEAEEEEE 643
            IL  L  HLWPS     +A  +K +V++S GL+V+SK +TIQVPF+FK++VD +     A L G+  +A+PL++++GYG+AR +A+A  EL NAVFATVAQK IRKV+   F HLH ++L FHL+R TGA+SR+IDRG RSI+FVL A+ F +VPT LE+GLV+ I++   G  +AGV LGT+ AYT FT+L+TQWR + R++M R+ENEA  K +DSL+NYETVKYF NEEHE  +YD+SL+ +Q A LKTQTSL++LNAGQN IFS+GL++IM +    I AG  SVGDLVLVNGLLFQLSIPL FIGSIYREVRQ++ DME+MF L  + P +T+P   L L                GP+ I F DV F Y P   ILR+ SFKV  G+ VA+VG SG GKST+LRLLYRFYD   G+I I+ +DIR + L  LR+A+ +VPQDT+LFNDTI+YNI+YG L A+   V  AAR +QIH+SI   P GY TRVGERGLKLSGGE+QRV+IARA+LKD+P+LL DEATSALD+ TE EI+     +G  +T+L+IAHRLSTIQDAD+I+V D+G V+++GSH+ELL R   G+YAE+W  Q  H       + +E +EE++
Sbjct:   93 ILSFLMGHLWPSDD-SKEAKEIKKKVLISAGLVVASKALTIQVPFIFKELVDSMG-ETSAMLAGSPEIAVPLAMVLGYGLARLSASASSELANAVFATVAQKTIRKVAVRVFKHLHAMDLKFHLDRQTGALSRIIDRGSRSIDFVLRAMAFRVVPTVLEIGLVSTIMATSFGLPYAGVTLGTLTAYTTFTVLVTQWRDEIRREMNRLENEAGAKVIDSLMNYETVKYFNNEEHETAQYDESLKGYQNAALKTQTSLAMLNAGQNGIFSVGLTAIMYMACEGIAAGTLSVGDLVLVNGLLFQLSIPLNFIGSIYREVRQSVTDMESMFKLGAVTPVITNPEENLSLS-------------GRGPKSIEFRDVQFGYRPELPILRKASFKVDAGKRVAIVGTSGSGKSTVLRLLYRFYDPQNGTILIDGKDIRQLSLDELRQAIAIVPQDTVLFNDTIFYNINYGRLDATSEEVMNAARVSQIHQSIKTFPDGYNTRVGERGLKLSGGEKQRVSIARAMLKDSPILLFDEATSALDSETESEIVREFASIGANRTSLIIAHRLSTIQDADEIIVFDKGHVIQQGSHEELL-RDVEGKYAEMWARQNHHMLGLISSDGDELDEEKK 699          
BLAST of EWM21381.1 vs. NCBI_GenBank
Match: gi|970659660|gb|KUF97282.1| (hypothetical protein AM588_10006585 [Phytophthora nicotianae] >gi|970660654|gb|KUF98184.1| ABC transporter B family member 25 [Phytophthora nicotianae])

HSP 1 Score: 697.197 bits (1798), Expect = 0.000e+0
Identity = 350/609 (57.47%), Postives = 451/609 (74.06%), Query Frame = 0
Query:   24 ILKTLGRHLWPSTSLHPDAASLKARVVLSMGLLVSSKLITIQVPFLFKDIVDKLNVPPDAFLTGA--VALPLSLLVGYGVARTTATAFQELRNAVFATVAQKAIRKVSRDAFVHLHDLELDFHLNRSTGAVSRVIDRGGRSINFVLSALLFNIVPTALEMGLVAYILSVQCGWKHAGVALGTVGAYTVFTILITQWRTQFRKDMVRIENEASGKAVDSLLNYETVKYFGNEEHEADRYDQSLRDFQEAGLKTQTSLSLLNAGQNAIFSLGLSSIMVLTALDIQAGLASVGDLVLVNGLLFQLSIPLFFIGSIYREVRQALVDMEAMFDLKDLQPKVTSPPHALPLVLPPALPPSLPPSLPPGPEGIVFEDVSFAYGPH-QILRECSFKVPYGQTVAVVGPSGCGKSTLLRLLYRFYDVDGGSIQINHQDIRDVPLPSLRRALGVVPQDTLLFNDTIYYNIHYGNLLASRAAVETAARKAQIHESILRMPQGYETRVGERGLKLSGGERQRVAIARAILKDAPMLLCDEATSALDAATEGEIMHHVKVLGQGKTTLMIAHRLSTIQDADKIVVLDQGRVVEEGSHQELLARGEGGRYAELWEMQQKHHAV 629
            IL  L  HLWPS     +A  +K +V++S GL+V+SK +TIQVPF+FK++V+ +       L G+  + +PL++++GYG+AR +A+A  EL NAVFATVAQK IRKV+   F HLH ++L FHL+R TGA+SR+IDRG RSI+FVL A+ F +VPT LE+GLVA I++   G  +AGV LGT+ AYT FT+L+TQWR + R++M R+ENEA  K +DSL+NYETVKYF NEEHE +RYD+SL+ +Q+A LKTQTSL++LNAGQN IFS+GL++IM +    I AG  SVGDLVLVNGLLFQLSIPL FIGSIYREVRQ++ DME+MF L  + P +T+P   L L                 P+ I F DV F Y P   ILR+ SFKV  G+ VA+VG SG GKST+LRLLYRFYD   G+I I+ +DIR + L  LR+A+ +VPQDT+LFNDTI+YNI+YG L A+   V  AAR +QIH SI   P GY TRVGERGLKLSGGE+QRV+IARA+LKD+P+LL DEATSALD+ TE EI+     +G  +T+L+IAHRLSTIQDAD+I+V D+G V+++GSH+ELL R   G+YAE+W  +Q HH +
Sbjct:   13 ILSFLMGHLWPSED-SKEAKEIKQKVLISAGLVVASKALTIQVPFIFKELVNSMG-EASTVLAGSPEITVPLAMVLGYGLARFSASASSELANAVFATVAQKTIRKVAVRVFKHLHAMDLKFHLDRQTGALSRIIDRGSRSIDFVLRAMAFRVVPTVLEIGLVATIMATSFGLPYAGVTLGTLTAYTAFTVLVTQWRDEIRREMNRLENEAGAKVIDSLMNYETVKYFNNEEHETERYDESLKGYQKAALKTQTSLAMLNAGQNGIFSVGLTAIMYMACEGIAAGTLSVGDLVLVNGLLFQLSIPLNFIGSIYREVRQSVTDMESMFKLGAVTPVITNPDENLSLS-------------GKEPKSIEFRDVEFGYRPELPILRKASFKVDAGKRVAIVGTSGSGKSTVLRLLYRFYDPQNGTILIDGKDIRQLSLDELRQAIAIVPQDTVLFNDTIFYNINYGRLEATSEEVMNAARVSQIHRSIETFPDGYNTRVGERGLKLSGGEKQRVSIARAMLKDSPILLFDEATSALDSETESEIVREFASIGANRTSLIIAHRLSTIQDADEIIVFDKGHVIQQGSHEELL-RDVEGKYAEMWS-RQNHHVL 604          
BLAST of EWM21381.1 vs. NCBI_GenBank
Match: gi|568008881|gb|ETL83095.1| (hypothetical protein L917_16902 [Phytophthora parasitica])

HSP 1 Score: 696.427 bits (1796), Expect = 0.000e+0
Identity = 350/609 (57.47%), Postives = 451/609 (74.06%), Query Frame = 0
Query:   24 ILKTLGRHLWPSTSLHPDAASLKARVVLSMGLLVSSKLITIQVPFLFKDIVDKLNVPPDAFLTGA--VALPLSLLVGYGVARTTATAFQELRNAVFATVAQKAIRKVSRDAFVHLHDLELDFHLNRSTGAVSRVIDRGGRSINFVLSALLFNIVPTALEMGLVAYILSVQCGWKHAGVALGTVGAYTVFTILITQWRTQFRKDMVRIENEASGKAVDSLLNYETVKYFGNEEHEADRYDQSLRDFQEAGLKTQTSLSLLNAGQNAIFSLGLSSIMVLTALDIQAGLASVGDLVLVNGLLFQLSIPLFFIGSIYREVRQALVDMEAMFDLKDLQPKVTSPPHALPLVLPPALPPSLPPSLPPGPEGIVFEDVSFAYGPH-QILRECSFKVPYGQTVAVVGPSGCGKSTLLRLLYRFYDVDGGSIQINHQDIRDVPLPSLRRALGVVPQDTLLFNDTIYYNIHYGNLLASRAAVETAARKAQIHESILRMPQGYETRVGERGLKLSGGERQRVAIARAILKDAPMLLCDEATSALDAATEGEIMHHVKVLGQGKTTLMIAHRLSTIQDADKIVVLDQGRVVEEGSHQELLARGEGGRYAELWEMQQKHHAV 629
            IL  L  HLWPS     +A  +K +V++S GL+V+SK +TIQVPF+FK++V+ +       L G+  + +PL++++GYG+AR +A+A  EL NAVFATVAQK IRKV+   F HLH ++L FHL+R TGA+SR+IDRG RSI+FVL A+ F +VPT LE+GLVA I++   G  +AGV LGT+ AYT FT+L+TQWR + R++M R+ENEA  K +DSL+NYETVKYF NEEHE +RYD+SL+ +Q+A LKTQTSL++LNAGQN IFS+GL++IM +    I AG  SVGDLVLVNGLLFQLSIPL FIGSIYREVRQ++ DME+MF L  + P +T+P   L L                 P+ I F DV F Y P   ILR+ SFKV  G+ VA+VG SG GKST+LRLLYRFYD   G+I I+ +DIR + L  LR+A+ +VPQDT+LFNDTI+YNI+YG L A+   V  AAR +QIH SI   P GY TRVGERGLKLSGGE+QRV+IARA+LKD+P+LL DEATSALD+ TE EI+     +G  +T+L+IAHRLSTIQDAD+I+V D+G V+++GSH+ELL R   G+YAE+W  +Q HH +
Sbjct:   91 ILSFLMGHLWPSED-SKEAKEIKQKVLISAGLVVASKALTIQVPFIFKELVNSMG-EASTVLAGSPEITVPLAMVLGYGLARFSASASSELANAVFATVAQKTIRKVAVRVFKHLHAMDLKFHLDRQTGALSRIIDRGSRSIDFVLRAMAFRVVPTVLEIGLVATIMATSFGLPYAGVTLGTLTAYTAFTVLVTQWRDEIRREMNRLENEAGAKVIDSLMNYETVKYFNNEEHETERYDESLKGYQKAALKTQTSLAMLNAGQNGIFSVGLTAIMYMACEGIAAGTLSVGDLVLVNGLLFQLSIPLNFIGSIYREVRQSVTDMESMFKLGAVTPVITNPDENLNLS-------------GKEPKSIEFRDVEFGYRPELPILRKASFKVDAGKRVAIVGTSGSGKSTVLRLLYRFYDPQNGTILIDGKDIRQLSLDELRQAIAIVPQDTVLFNDTIFYNINYGRLEATSEEVMNAARVSQIHRSIETFPDGYNTRVGERGLKLSGGEKQRVSIARAMLKDSPILLFDEATSALDSETESEIVREFASIGANRTSLIIAHRLSTIQDADEIIVFDKGHVIQQGSHEELL-RDVEGKYAEMWS-RQNHHVL 682          
BLAST of EWM21381.1 vs. NCBI_GenBank
Match: gi|567979388|gb|ETL29867.1| (hypothetical protein L916_17075 [Phytophthora parasitica] >gi|568038797|gb|ETM36314.1| hypothetical protein L914_16983 [Phytophthora parasitica] >gi|570316978|gb|ETO64926.1| hypothetical protein F444_17684 [Phytophthora parasitica P1976] >gi|570971018|gb|ETP34137.1| hypothetical protein F442_17499 [Phytophthora parasitica P10297])

HSP 1 Score: 696.427 bits (1796), Expect = 0.000e+0
Identity = 350/609 (57.47%), Postives = 451/609 (74.06%), Query Frame = 0
Query:   24 ILKTLGRHLWPSTSLHPDAASLKARVVLSMGLLVSSKLITIQVPFLFKDIVDKLNVPPDAFLTGA--VALPLSLLVGYGVARTTATAFQELRNAVFATVAQKAIRKVSRDAFVHLHDLELDFHLNRSTGAVSRVIDRGGRSINFVLSALLFNIVPTALEMGLVAYILSVQCGWKHAGVALGTVGAYTVFTILITQWRTQFRKDMVRIENEASGKAVDSLLNYETVKYFGNEEHEADRYDQSLRDFQEAGLKTQTSLSLLNAGQNAIFSLGLSSIMVLTALDIQAGLASVGDLVLVNGLLFQLSIPLFFIGSIYREVRQALVDMEAMFDLKDLQPKVTSPPHALPLVLPPALPPSLPPSLPPGPEGIVFEDVSFAYGPH-QILRECSFKVPYGQTVAVVGPSGCGKSTLLRLLYRFYDVDGGSIQINHQDIRDVPLPSLRRALGVVPQDTLLFNDTIYYNIHYGNLLASRAAVETAARKAQIHESILRMPQGYETRVGERGLKLSGGERQRVAIARAILKDAPMLLCDEATSALDAATEGEIMHHVKVLGQGKTTLMIAHRLSTIQDADKIVVLDQGRVVEEGSHQELLARGEGGRYAELWEMQQKHHAV 629
            IL  L  HLWPS     +A  +K +V++S GL+V+SK +TIQVPF+FK++V+ +       L G+  + +PL++++GYG+AR +A+A  EL NAVFATVAQK IRKV+   F HLH ++L FHL+R TGA+SR+IDRG RSI+FVL A+ F +VPT LE+GLVA I++   G  +AGV LGT+ AYT FT+L+TQWR + R++M R+ENEA  K +DSL+NYETVKYF NEEHE +RYD+SL+ +Q+A LKTQTSL++LNAGQN IFS+GL++IM +    I AG  SVGDLVLVNGLLFQLSIPL FIGSIYREVRQ++ DME+MF L  + P +T+P   L L                 P+ I F DV F Y P   ILR+ SFKV  G+ VA+VG SG GKST+LRLLYRFYD   G+I I+ +DIR + L  LR+A+ +VPQDT+LFNDTI+YNI+YG L A+   V  AAR +QIH SI   P GY TRVGERGLKLSGGE+QRV+IARA+LKD+P+LL DEATSALD+ TE EI+     +G  +T+L+IAHRLSTIQDAD+I+V D+G V+++GSH+ELL R   G+YAE+W  +Q HH +
Sbjct:   91 ILSFLMGHLWPSED-SKEAKEIKQKVLISAGLVVASKALTIQVPFIFKELVNSMG-EASTVLAGSPEITVPLAMVLGYGLARFSASASSELANAVFATVAQKTIRKVAVRVFKHLHAMDLKFHLDRQTGALSRIIDRGSRSIDFVLRAMAFRVVPTVLEIGLVATIMATSFGLPYAGVTLGTLTAYTAFTVLVTQWRDEIRREMNRLENEAGAKVIDSLMNYETVKYFNNEEHETERYDESLKGYQKAALKTQTSLAMLNAGQNGIFSVGLTAIMYMACEGIAAGTLSVGDLVLVNGLLFQLSIPLNFIGSIYREVRQSVTDMESMFKLGAVTPVITNPDENLSLS-------------GKEPKSIEFRDVEFGYRPELPILRKASFKVDAGKRVAIVGTSGSGKSTVLRLLYRFYDPQNGTILIDGKDIRQLSLDELRQAIAIVPQDTVLFNDTIFYNINYGRLEATSEEVMNAARVSQIHRSIETFPDGYNTRVGERGLKLSGGEKQRVSIARAMLKDSPILLFDEATSALDSETESEIVREFASIGANRTSLIIAHRLSTIQDADEIIVFDKGHVIQQGSHEELL-RDVEGKYAEMWS-RQNHHVL 682          
BLAST of EWM21381.1 vs. NCBI_GenBank
Match: gi|675174515|ref|XP_008896142.1| (hypothetical protein PPTG_04070 [Phytophthora parasitica INRA-310] >gi|566013293|gb|ETI36204.1| hypothetical protein F443_17643 [Phytophthora parasitica P1569] >gi|567950719|gb|ETK76427.1| hypothetical protein L915_17180 [Phytophthora parasitica] >gi|568103815|gb|ETN18472.1| hypothetical protein PPTG_04070 [Phytophthora parasitica INRA-310] >gi|570940771|gb|ETP06028.1| hypothetical protein F441_17511 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 696.427 bits (1796), Expect = 0.000e+0
Identity = 350/609 (57.47%), Postives = 451/609 (74.06%), Query Frame = 0
Query:   24 ILKTLGRHLWPSTSLHPDAASLKARVVLSMGLLVSSKLITIQVPFLFKDIVDKLNVPPDAFLTGA--VALPLSLLVGYGVARTTATAFQELRNAVFATVAQKAIRKVSRDAFVHLHDLELDFHLNRSTGAVSRVIDRGGRSINFVLSALLFNIVPTALEMGLVAYILSVQCGWKHAGVALGTVGAYTVFTILITQWRTQFRKDMVRIENEASGKAVDSLLNYETVKYFGNEEHEADRYDQSLRDFQEAGLKTQTSLSLLNAGQNAIFSLGLSSIMVLTALDIQAGLASVGDLVLVNGLLFQLSIPLFFIGSIYREVRQALVDMEAMFDLKDLQPKVTSPPHALPLVLPPALPPSLPPSLPPGPEGIVFEDVSFAYGPH-QILRECSFKVPYGQTVAVVGPSGCGKSTLLRLLYRFYDVDGGSIQINHQDIRDVPLPSLRRALGVVPQDTLLFNDTIYYNIHYGNLLASRAAVETAARKAQIHESILRMPQGYETRVGERGLKLSGGERQRVAIARAILKDAPMLLCDEATSALDAATEGEIMHHVKVLGQGKTTLMIAHRLSTIQDADKIVVLDQGRVVEEGSHQELLARGEGGRYAELWEMQQKHHAV 629
            IL  L  HLWPS     +A  +K +V++S GL+V+SK +TIQVPF+FK++V+ +       L G+  + +PL++++GYG+AR +A+A  EL NAVFATVAQK IRKV+   F HLH ++L FHL+R TGA+SR+IDRG RSI+FVL A+ F +VPT LE+GLVA I++   G  +AGV LGT+ AYT FT+L+TQWR + R++M R+ENEA  K +DSL+NYETVKYF NEEHE +RYD+SL+ +Q+A LKTQTSL++LNAGQN IFS+GL++IM +    I AG  SVGDLVLVNGLLFQLSIPL FIGSIYREVRQ++ DME+MF L  + P +T+P   L L                 P+ I F DV F Y P   ILR+ SFKV  G+ VA+VG SG GKST+LRLLYRFYD   G+I I+ +DIR + L  LR+A+ +VPQDT+LFNDTI+YNI+YG L A+   V  AAR +QIH SI   P GY TRVGERGLKLSGGE+QRV+IARA+LKD+P+LL DEATSALD+ TE EI+     +G  +T+L+IAHRLSTIQDAD+I+V D+G V+++GSH+ELL R   G+YAE+W  +Q HH +
Sbjct:   91 ILSFLMGHLWPSED-SKEAKEIKQKVLISAGLVVASKALTIQVPFIFKELVNSMG-EASTVLAGSPEITVPLAMVLGYGLARFSASASSELANAVFATVAQKTIRKVAVRVFKHLHAMDLKFHLDRQTGALSRIIDRGSRSIDFVLRAMAFRVVPTVLEIGLVATIMATSFGLPYAGVTLGTLTAYTAFTVLVTQWRDEIRREMNRLENEAGAKVIDSLMNYETVKYFNNEEHETERYDESLKGYQKAALKTQTSLAMLNAGQNGIFSVGLTAIMYMACEGIAAGTLSVGDLVLVNGLLFQLSIPLNFIGSIYREVRQSVTDMESMFKLGAVTPVITNPDENLSLS-------------GKEPKSIEFRDVEFGYRPELPILRKASFKVDAGKRVAIVGTSGSGKSTVLRLLYRFYDPQNGTILIDGKDIRQLSLDELRQAIAIVPQDTVLFNDTIFYNINYGRLEATSEEVMNAARVSQIHRSIETFPDGYNTRVGERGLKLSGGEKQRVSIARAMLKDSPILLFDEATSALDSETESEIVREFASIGANRTSLIIAHRLSTIQDADEIIVFDKGHVIQQGSHEELL-RDVEGKYAEMWS-RQNHHVL 682          
The following BLAST results are available for this feature:
BLAST of EWM21381.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101595|gb|EWM21381.1|0.000e+0100.00abc transporter b family protein [Nannochloropsis ... [more]
gi|669159696|ref|XP_008615410.1|0.000e+059.39ATP-binding cassette, subfamily B (MDR/TAP), membe... [more]
gi|1173936225|gb|OQR87212.1|0.000e+059.44ATP-binding Cassette (ABC) Superfamily [Achlya hyp... [more]
gi|673023964|ref|XP_008865943.1|0.000e+059.63hypothetical protein H310_03747 [Aphanomyces invad... [more]
gi|698825253|ref|XP_009845655.1|0.000e+057.62hypothetical protein H257_18317 [Aphanomyces astac... [more]
gi|301103670|ref|XP_002900921.1|0.000e+056.82ATP-binding Cassette (ABC) Superfamily [Phytophtho... [more]
gi|970659660|gb|KUF97282.1|0.000e+057.47hypothetical protein AM588_10006585 [Phytophthora ... [more]
gi|568008881|gb|ETL83095.1|0.000e+057.47hypothetical protein L917_16902 [Phytophthora para... [more]
gi|567979388|gb|ETL29867.1|0.000e+057.47hypothetical protein L916_17075 [Phytophthora para... [more]
gi|675174515|ref|XP_008896142.1|0.000e+057.47hypothetical protein PPTG_04070 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9323rna9323Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications